Item | Value |
---|---|
geneid | 100130361 |
ensemblid | ENSG00000215115.7 |
hgncid | 30891 |
symbol | CXorf49 |
name | chromosome X open reading frame 49 |
refseq_nuc | NM_001145140.2 |
refseq_prot | NP_001138612.1 |
ensembl_nuc | ENST00000535490.3 |
ensembl_prot | ENSP00000480355.1 |
mane_status | MANE Select |
chr | chrX |
start | 71714371 |
end | 71718285 |
strand | - |
ver | v1.2 |
region | chrX:71714371-71718285 |
region5000 | chrX:71709371-71723285 |
regionname0 | CXorf49_chrX_71714371_71718285 |
regionname5000 | CXorf49_chrX_71709371_71723285 |
ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001 | 0/0 | 514 | 43 | 5 | 16 | 13 | 3 | 6 | 7 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0002 | 0/0 | 514 | 13 | 4 | 1 | 5 | 0 | 3 | 3 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0003 | 0/0 | 514 | 10 | 4 | 2 | 2 | 0 | 2 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0004 | 0/0 | 514 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0005 | 0/0 | 514 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0006 | 0/0 | 209 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(204): Show |
chrX | 71709371 | 71723285 |
a0007 | 0/0 | 514 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0008 | 0/0 | 514 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSSPD others(509): Show |
chrX | 71709371 | 71723285 |
a0009 | 0/0 | 514 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | MSFPD others(509): Show |
chrX | 71709371 | 71723285 |
achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001 | 0/0 | 1542 | 41 | 4 | 15 | 13 | 3 | 6 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0001c0009 | 0/0 | 1542 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0001c0011 | 0/0 | 1542 | 1 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0002c0002 | 0/0 | 1542 | 13 | 4 | 1 | 5 | 0 | 3 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0003c0003 | 0/0 | 1542 | 10 | 4 | 2 | 2 | 0 | 2 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0004c0005 | 0/0 | 1542 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0004c0007 | 0/0 | 1542 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0005c0010 | 0/0 | 1542 | 1 | 0 | 0 | 0 | 1 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0006c0006 | 0/0 | 1558 | 1 | 0 | 0 | 1 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1553): Show |
chrX | 71709371 | 71723285 | ||
a0007c0008 | 0/0 | 1542 | 1 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0008c0004 | 0/0 | 1542 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 | ||
a0009c0012 | 0/0 | 1542 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | ATGAG others(1537): Show |
chrX | 71709371 | 71723285 |
acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001 | 0/0 | 1854 | 38 | 3 | 13 | 13 | 3 | 6 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0001c0001t0002 | 0/0 | 1855 | 2 | 0 | 2 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGG others(1850): Show |
chrX | 71709371 | 71723285 |
a0001c0001t0003 | 0/0 | 1854 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0001c0009t0001 | 0/0 | 1854 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0001c0011t0001 | 0/0 | 1854 | 1 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0002c0002t0001 | 0/0 | 1854 | 12 | 4 | 1 | 5 | 0 | 2 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0002c0002t0002 | 0/0 | 1855 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGG others(1850): Show |
chrX | 71709371 | 71723285 |
a0003c0003t0001 | 0/0 | 1854 | 10 | 4 | 2 | 2 | 0 | 2 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0004c0005t0001 | 0/0 | 1854 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0004c0007t0001 | 0/0 | 1854 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0005c0010t0001 | 0/0 | 1854 | 1 | 0 | 0 | 0 | 1 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0006c0006t0001 | 0/0 | 1870 | 1 | 0 | 0 | 1 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1865): Show |
chrX | 71709371 | 71723285 |
a0007c0008t0001 | 0/0 | 1854 | 1 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0008c0004t0001 | 0/0 | 1854 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
a0009c0012t0001 | 0/0 | 1854 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | GCGGT others(1849): Show |
chrX | 71709371 | 71723285 |
actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001g0001 | 0/0 | 34 | 2 | 11 | 13 | 2 | 6 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0001c0001t0001g0004 | 0/0 | 3 | 0 | 2 | 0 | 1 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0001c0001t0001g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0001c0001t0002g0005 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0001c0001t0003g0013 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0001c0009t0001g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0001c0011t0001g0017 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0002c0002t0001g0002 | 0/0 | 11 | 4 | 1 | 4 | 0 | 2 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0002c0002t0001g0007 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0002c0002t0002g0006 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0003c0003t0001g0003 | 0/0 | 10 | 4 | 2 | 2 | 0 | 2 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0004c0005t0001g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0004c0007t0001g0011 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0005c0010t0001g0016 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0006c0006t0001g0010 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0007c0008t0001g0012 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0008c0004t0001g0008 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
a0009c0012t0001g0018 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
HG00099 | hp1 | a0001 | c0001 | t0001 | g0004 | EUR | GBR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00099 | hp2 | a0005 | c0010 | t0001 | g0016 | EUR | GBR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00558 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00558 | hp2 | a0003 | c0003 | t0001 | g0003 | EAS | CHS | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00609 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00621 | hp1 | a0006 | c0006 | t0001 | g0010 | EAS | CHS | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00673 | hp1 | a0002 | c0002 | t0001 | g0002 | EAS | CHS | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG00735 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01071 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01071 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01074 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01106 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01169 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01169 | hp2 | a0007 | c0008 | t0001 | g0012 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01175 | hp1 | a0001 | c0001 | t0002 | g0005 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01175 | hp2 | a0001 | c0001 | t0002 | g0005 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01243 | hp1 | a0002 | c0002 | t0001 | g0002 | AMR | PUR | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01255 | hp1 | a0001 | c0011 | t0001 | g0017 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01256 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01258 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01261 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01346 | hp1 | a0003 | c0003 | t0001 | g0003 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01346 | hp2 | a0003 | c0003 | t0001 | g0003 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01358 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG01952 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02027 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02040 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02055 | hp1 | a0001 | c0001 | t0003 | g0013 | AFR | ACB | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02074 | hp1 | a0002 | c0002 | t0001 | g0007 | EAS | KHV | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02647 | hp2 | a0003 | c0003 | t0001 | g0003 | AFR | GWD | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02683 | hp1 | a0003 | c0003 | t0001 | g0003 | SAS | PJL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02683 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02735 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02738 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02809 | hp1 | a0002 | c0002 | t0001 | g0002 | AFR | GWD | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02809 | hp2 | a0003 | c0003 | t0001 | g0003 | AFR | GWD | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG02965 | hp2 | a0001 | c0009 | t0001 | g0015 | AFR | ESN | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03017 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03139 | hp1 | a0002 | c0002 | t0001 | g0002 | AFR | ESN | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03225 | hp1 | a0004 | c0007 | t0001 | g0011 | AFR | MSL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03486 | hp1 | a0002 | c0002 | t0001 | g0002 | AFR | MSL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03486 | hp2 | a0001 | c0001 | t0001 | g0014 | AFR | MSL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03492 | hp1 | a0002 | c0002 | t0002 | g0006 | SAS | PJL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03540 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03540 | hp2 | a0003 | c0003 | t0001 | g0003 | AFR | GWD | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03579 | hp1 | a0003 | c0003 | t0001 | g0003 | AFR | MSL | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG03942 | hp1 | a0002 | c0002 | t0001 | g0002 | SAS | BEB | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG04115 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG04184 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG04184 | hp2 | a0008 | c0004 | t0001 | g0008 | SAS | BEB | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG04199 | hp2 | a0009 | c0012 | t0001 | g0018 | SAS | STU | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
HG04204 | hp1 | a0002 | c0002 | t0001 | g0002 | SAS | STU | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA18952 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA18971 | hp1 | a0002 | c0002 | t0001 | g0002 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA18983 | hp1 | a0002 | c0002 | t0001 | g0002 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA18984 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA18995 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19000 | hp1 | a0003 | c0003 | t0001 | g0003 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19012 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19030 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19030 | hp2 | a0004 | c0005 | t0001 | g0009 | AFR | LWK | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19043 | hp1 | a0002 | c0002 | t0001 | g0002 | AFR | LWK | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19067 | hp1 | a0002 | c0002 | t0001 | g0002 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19083 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19089 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA19091 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
NA20905 | hp1 | a0003 | c0003 | t0001 | g0003 | SAS | GIH | CXorf49_chrX_71709371_71723285 | CXorf49 | chrX | 71709371 | 71723285 |
view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:71716242 | G | C | 1 | a0007 | 1 | HG01169.hp2 | missense_variant | MODERATE | c.1334C>G | p.Ser445Trp | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 2/6 | 1468/1854 | 1334/1545 | 445/514 | chrX | 71716242 | |||
chrX:71717154 | A | G | 5 | a0002 a0003 a0004 others(2): Show |
27 | HG00558.hp2 HG00673.hp1 HG01169.hp2 others(24): Show |
missense_variant | MODERATE | c.998T>C | p.Leu333Pro | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 1132/1854 | 998/1545 | 333/514 | chrX | 71717154 | |||
chrX:71717307 | G | A | 1 | a0003 | 10 | HG00558.hp2 HG01346.hp1 HG01346.hp2 others(7): Show |
missense_variant | MODERATE | c.845C>T | p.Pro282Leu | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 979/1854 | 845/1545 | 282/514 | chrX | 71717307 | |||
chrX:71717545 | C | CGTGGGTA others(9): Show |
1 | a0006 | 1 | HG00621.hp1 | frameshift_variant | HIGH | c.591_606dupCAGGCTGC others(8): Show |
p.Asp203fs | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 740/1854 | 606/1545 | 202/514 | chrX | 71717545 | |||
chrX:71717676 | C | G | 1 | a0009 | 1 | HG04199.hp2 | missense_variant | MODERATE | c.476G>C | p.Arg159Pro | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 610/1854 | 476/1545 | 159/514 | chrX | 71717676 | |||
chrX:71717724 | T | C | 1 | a0003 | 10 | HG00558.hp2 HG01346.hp1 HG01346.hp2 others(7): Show |
missense_variant | MODERATE | c.428A>G | p.Asp143Gly | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 562/1854 | 428/1545 | 143/514 | chrX | 71717724 | |||
chrX:71717773 | C | A | 1 | a0008 | 1 | HG04184.hp2 | missense_variant | MODERATE | c.379G>T | p.Gly127Trp | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 513/1854 | 379/1545 | 127/514 | chrX | 71717773 | |||
chrX:71717892 | G | A | 1 | a0005 | 1 | HG00099.hp2 | missense_variant | MODERATE | c.260C>T | p.Pro87Leu | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 394/1854 | 260/1545 | 87/514 | chrX | 71717892 | |||
chrX:71718122 | A | C | 2 | a0002 a0008 |
14 | HG00673.hp1 HG01243.hp1 HG02074.hp1 others(11): Show |
missense_variant | MODERATE | c.30T>G | p.Cys10Trp | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 164/1854 | 30/1545 | 10/514 | chrX | 71718122 | |||
chrX:71718144 | G | A | 1 | a0009 | 1 | HG04199.hp2 | missense_variant | MODERATE | c.8C>T | p.Ser3Phe | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 142/1854 | 8/1545 | 3/514 | chrX | 71718144 |
view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:71717573 | C | T | 1 | a0004c0005 | 1 | NA19030.hp2 | synonymous_variant | LOW | c.579G>A | p.Ala193Ala | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 713/1854 | 579/1545 | 193/514 | chrX | 71717573 | |||
chrX:71717783 | G | A | 1 | a0001c0009 | 1 | HG02965.hp2 | synonymous_variant | LOW | c.369C>T | p.Ala123Ala | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 503/1854 | 369/1545 | 123/514 | chrX | 71717783 | |||
chrX:71718128 | G | A | 1 | a0001c0011 | 1 | HG01255.hp1 | synonymous_variant | LOW | c.24C>T | p.Ser8Ser | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 158/1854 | 24/1545 | 8/514 | chrX | 71718128 |
view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:71714407 | C | T | 1 | a0001c0001t0003 | 1 | HG02055.hp1 | 3_prime_UTR_variant | MODIFIER | c.*139G>A | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 6/6 | 245 | chrX | 71714407 | ||||||
chrX:71718281 | A | AC | 2 | a0001c0001t0002 a0002c0002t0002 |
3 | HG01175.hp1 HG01175.hp2 HG03492.hp1 |
5_prime_UTR_variant | MODIFIER | c.-131dupG | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/6 | 131 | chrX | 71718281 |
view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:71714813 | A | G | 1 | a0001c0001t0001g0004 | 3 | HG00099.hp1 HG00735.hp2 HG01106.hp1 |
intron_variant | MODIFIER | c.1505-121T>C | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 4/5 | chrX | 71714813 | |||||||
chrX:71714952 | A | G | 17 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0002g0005 others(14): Show |
72 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(69): Show |
intron_variant | MODIFIER | c.1505-260T>C | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 4/5 | chrX | 71714952 | |||||||
chrX:71715548 | A | G | 1 | a0007c0008t0001g0012 | 1 | HG01169.hp2 | intron_variant | MODIFIER | c.1458+27T>C | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 3/5 | chrX | 71715548 | |||||||
chrX:71715893 | C | T | 1 | a0002c0002t0001g0007 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.1382-242G>A | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 2/5 | chrX | 71715893 | |||||||
chrX:71715981 | C | T | 1 | a0004c0005t0001g0009 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.1381+214G>A | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 2/5 | chrX | 71715981 | |||||||
chrX:71716103 | G | A | 1 | a0009c0012t0001g0018 | 1 | HG04199.hp2 | intron_variant | MODIFIER | c.1381+92C>T | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 2/5 | chrX | 71716103 | |||||||
chrX:71716408 | G | C | 1 | a0004c0007t0001g0011 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.1225-57C>G | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/5 | chrX | 71716408 | |||||||
chrX:71716445 | A | G | 1 | a0001c0009t0001g0015 | 1 | HG02965.hp2 | intron_variant | MODIFIER | c.1225-94T>C | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/5 | chrX | 71716445 | |||||||
chrX:71716554 | T | C | 1 | a0004c0005t0001g0009 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.1225-203A>G | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/5 | chrX | 71716554 | |||||||
chrX:71716779 | C | T | 1 | a0004c0007t0001g0011 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.1224+149G>A | CXorf49 | ENSG00000215115.7 | transcript | ENST00000535490.3 | protein_coding | 1/5 | chrX | 71716779 |