geneid | 441317 |
---|---|
ensemblid | ENSG00000285975.1 |
hgncid | 32255 |
symbol | FAM90A7 |
name | family with sequence similarity 90 member A7 |
refseq_nuc | NM_001397387.1 |
refseq_prot | NP_001384316.1 |
ensembl_nuc | ENST00000650288.1 |
ensembl_prot | ENSP00000497076.1 |
mane_status | MANE Select |
chr | chr8 |
start | 7556700 |
end | 7559712 |
strand | - |
ver | v1.2 |
region | chr8:7556700-7559712 |
region5000 | chr8:7551700-7564712 |
regionname0 | FAM90A7_chr8_7556700_7559712 |
regionname5000 | FAM90A7_chr8_7551700_7564712 |
ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001 | 0/0 | 464 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0002 | 0/0 | 5 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0003 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0004 | 0/0 | 464 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0005 | 0/0 | 464 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0006 | 0/0 | 464 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0007 | 0/0 | 464 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0008 | 0/0 | 464 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0009 | 0/0 | 464 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0010 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0011 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0012 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0013 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0014 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0015 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0016 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0017 | 0/0 | 464 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
c0001 | 0/0 | 1395 | 2 | 0 | 0 | 0 | 0 | 2 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0002 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0003 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0004 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0005 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0006 | 0/0 | 1395 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0007 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0008 | 0/0 | 1395 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0009 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0010 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0011 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0012 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0013 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0014 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0015 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0016 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
c0017 | 0/0 | 1178 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|
ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
g0001 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0002 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0003 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0005 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0006 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0007 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0008 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0010 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0011 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0013 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
g0018 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001 | 0/0 | 1395 | 2 | 0 | 0 | 0 | 0 | 2 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0002c0017 | 0/0 | 1178 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0003c0002 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0004c0003 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0005c0005 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0006c0004 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0007c0006 | 0/0 | 1395 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0008c0007 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0009c0008 | 0/0 | 1395 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0010c0011 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0011c0010 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0012c0009 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0013c0012 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0014c0014 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0015c0013 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0016c0015 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0017c0016 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0000 | 0/0 | 1395 | 2 | 0 | 0 | 0 | 0 | 2 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0002c0017t0000 | 0/0 | 1178 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0003c0002t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0004c0003t0000 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0005c0005t0000 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0006c0004t0000 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0007c0006t0000 | 0/0 | 1395 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0008c0007t0000 | 0/0 | 1395 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0009c0008t0000 | 0/0 | 1395 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0010c0011t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0011c0010t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0012c0009t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0013c0012t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0014c0014t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0015c0013t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0016c0015t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
a0017c0016t0000 | 0/0 | 1395 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | copy fasta | chr8 | 7551700 | 7564712 |
actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0000g0005 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0001c0001t0000g0011 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0002c0017t0000g0018 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0003c0002t0000g0003 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0004c0003t0000g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0005c0005t0000g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0006c0004t0000g0002 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0007c0006t0000g0010 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0008c0007t0000g0006 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0009c0008t0000g0007 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0010c0011t0000g0001 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0011c0010t0000g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0012c0009t0000g0008 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0013c0012t0000g0013 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0014c0014t0000g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0015c0013t0000g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0016c0015t0000g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
a0017c0016t0000g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
HG01517 | hp1 | a0009 | c0008 | t0000 | g0007 | EUR | IBS | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG01517 | hp2 | a0007 | c0006 | t0000 | g0010 | EUR | IBS | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG02738 | hp1 | a0001 | c0001 | t0000 | g0011 | SAS | PJL | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG02738 | hp2 | a0001 | c0001 | t0000 | g0005 | SAS | PJL | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG03195 | hp1 | a0012 | c0009 | t0000 | g0008 | AFR | ESN | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG03195 | hp2 | a0011 | c0010 | t0000 | g0009 | AFR | ESN | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG03486 | hp1 | a0013 | c0012 | t0000 | g0013 | AFR | MSL | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
HG03486 | hp2 | a0003 | c0002 | t0000 | g0003 | AFR | MSL | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA18952 | hp1 | a0005 | c0005 | t0000 | g0004 | EAS | JPT | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA18952 | hp2 | a0008 | c0007 | t0000 | g0006 | EAS | JPT | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA18998 | hp1 | a0004 | c0003 | t0000 | g0012 | EAS | JPT | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA18998 | hp2 | a0006 | c0004 | t0000 | g0002 | EAS | JPT | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA19030 | hp1 | a0014 | c0014 | t0000 | g0014 | AFR | LWK | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA19030 | hp2 | a0010 | c0011 | t0000 | g0001 | AFR | LWK | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA19043 | hp1 | a0015 | c0013 | t0000 | g0015 | AFR | LWK | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA19043 | hp2 | a0002 | c0017 | t0000 | g0018 | AFR | LWK | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA20129 | hp1 | a0016 | c0015 | t0000 | g0016 | AFR | ASW | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
NA20129 | hp2 | a0017 | c0016 | t0000 | g0017 | AFR | ASW | FAM90A7_chr8_7551700_7564712 | FAM90A7 | chr8 | 7551700 | 7564712 |
chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8:7556721
|
G | C | 2 | a0001a0009 | 3 | HG01517.hp1 HG02738.hp1 HG02738.hp2 |
missense_variant | MODERATE | c.1374C>G | p.Asp458Glu | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1374/1395 | 1374/1395 | 458/464 | chr8 | 7556721 | ||
chr8:7556788
|
G | C | 1 | a0011 | 1 | HG03195.hp2 | missense_variant | MODERATE | c.1307C>G | p.Ala436Gly | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1307/1395 | 1307/1395 | 436/464 | chr8 | 7556788 | ||
chr8:7556866
|
G | T | 2 | a0005a0006 | 2 | NA18952.hp1 NA18998.hp2 |
missense_variant | MODERATE | c.1229C>A | p.Ala410Asp | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1229/1395 | 1229/1395 | 410/464 | chr8 | 7556866 | ||
chr8:7556942
|
C | T | 3 | a0005a0006a0017 | 3 | NA18952.hp1 NA18998.hp2 NA20129.hp2 |
missense_variant | MODERATE | c.1153G>A | p.Gly385Ser | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1153/1395 | 1153/1395 | 385/464 | chr8 | 7556942 | ||
chr8:7556951
|
G | A | 11 | a0001a0002a0003others(8): Show | 12 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(9): Show |
missense_variant | MODERATE | c.1144C>T | p.Pro382Ser | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1144/1395 | 1144/1395 | 382/464 | chr8 | 7556951 | ||
chr8:7556984
|
G | T | 1 | a0006 | 1 | NA18998.hp2 | missense_variant | MODERATE | c.1111C>A | p.Pro371Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1111/1395 | 1111/1395 | 371/464 | chr8 | 7556984 | ||
chr8:7556995
|
G | C | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.1100C>G | p.Thr367Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1100/1395 | 1100/1395 | 367/464 | chr8 | 7556995 | ||
chr8:7557035
|
C | T | 1 | a0011 | 1 | HG03195.hp2 | missense_variant | MODERATE | c.1060G>A | p.Ala354Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1060/1395 | 1060/1395 | 354/464 | chr8 | 7557035 | ||
chr8:7557049
|
C | T | 1 | a0011 | 1 | HG03195.hp2 | missense_variant | MODERATE | c.1046G>A | p.Gly349Asp | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1046/1395 | 1046/1395 | 349/464 | chr8 | 7557049 | ||
chr8:7557083
|
T | A | 1 | a0005 | 1 | NA18952.hp1 | missense_variant | MODERATE | c.1012A>T | p.Thr338Ser | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1012/1395 | 1012/1395 | 338/464 | chr8 | 7557083 | ||
chr8:7557088
|
G | T | 1 | a0006 | 1 | NA18998.hp2 | missense_variant | MODERATE | c.1007C>A | p.Ala336Asp | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1007/1395 | 1007/1395 | 336/464 | chr8 | 7557088 | ||
chr8:7557116
|
C | T | 1 | a0007 | 1 | HG01517.hp2 | missense_variant | MODERATE | c.979G>A | p.Ala327Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 979/1395 | 979/1395 | 327/464 | chr8 | 7557116 | ||
chr8:7557119
|
G | C | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.976C>G | p.Arg326Gly | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 976/1395 | 976/1395 | 326/464 | chr8 | 7557119 | ||
chr8:7557220
|
C | T | 2 | a0002a0016 | 2 | NA19043.hp2 NA20129.hp1 |
missense_variant | MODERATE | c.875G>A | p.Arg292Lys | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 875/1395 | 875/1395 | 292/464 | chr8 | 7557220 | ||
chr8:7557236
|
C | G | 1 | a0010 | 1 | NA19030.hp2 | missense_variant | MODERATE | c.859G>C | p.Gly287Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 859/1395 | 859/1395 | 287/464 | chr8 | 7557236 | ||
chr8:7557296
|
A | G | 9 | a0001a0002a0003others(6): Show | 10 | HG01517.hp1 HG02738.hp1 HG02738.hp2 others(7): Show |
missense_variant | MODERATE | c.799T>C | p.Ser267Pro | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 799/1395 | 799/1395 | 267/464 | chr8 | 7557296 | ||
chr8:7557334
|
A | G | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.761T>C | p.Val254Ala | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 761/1395 | 761/1395 | 254/464 | chr8 | 7557334 | ||
chr8:7557335
|
C | A | 5 | a0001a0002a0009others(2): Show | 6 | HG01517.hp1 HG02738.hp1 HG02738.hp2 others(3): Show |
missense_variant | MODERATE | c.760G>T | p.Val254Phe | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 760/1395 | 760/1395 | 254/464 | chr8 | 7557335 | ||
chr8:7557337
|
G | A | 1 | a0014 | 1 | NA19030.hp1 | missense_variant | MODERATE | c.758C>T | p.Ala253Val | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 758/1395 | 758/1395 | 253/464 | chr8 | 7557337 | ||
chr8:7557382
|
C | T | 2 | a0002a0016 | 2 | NA19043.hp2 NA20129.hp1 |
missense_variant | MODERATE | c.713G>A | p.Arg238Gln | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 713/1395 | 713/1395 | 238/464 | chr8 | 7557382 | ||
chr8:7557401
|
T | G | 13 | a0001a0002a0003others(10): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
missense_variant | MODERATE | c.694A>C | p.Ser232Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 694/1395 | 694/1395 | 232/464 | chr8 | 7557401 | ||
chr8:7557421
|
A | T | 2 | a0002a0016 | 2 | NA19043.hp2 NA20129.hp1 |
missense_variant | MODERATE | c.674T>A | p.Val225Glu | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 674/1395 | 674/1395 | 225/464 | chr8 | 7557421 | ||
chr8:7557436
|
G | C | 12 | a0001a0003a0004others(9): Show | 13 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(10): Show |
missense_variant | MODERATE | c.659C>G | p.Pro220Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 659/1395 | 659/1395 | 220/464 | chr8 | 7557436 | ||
chr8:7557452
|
A | C | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.643T>G | p.Phe215Val | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 643/1395 | 643/1395 | 215/464 | chr8 | 7557452 | ||
chr8:7557465
|
G | C | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.630C>G | p.Ile210Met | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 630/1395 | 630/1395 | 210/464 | chr8 | 7557465 | ||
chr8:7557530
|
C | T | 2 | a0002a0016 | 2 | NA19043.hp2 NA20129.hp1 |
missense_variant | MODERATE | c.565G>A | p.Ala189Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 565/1395 | 565/1395 | 189/464 | chr8 | 7557530 | ||
chr8:7557580
|
T | G | 1 | a0017 | 1 | NA20129.hp2 | missense_variant | MODERATE | c.515A>C | p.Glu172Ala | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 515/1395 | 515/1395 | 172/464 | chr8 | 7557580 | ||
chr8:7557607
|
G | T | 1 | a0003 | 1 | HG03486.hp2 | missense_variant | MODERATE | c.488C>A | p.Pro163His | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 488/1395 | 488/1395 | 163/464 | chr8 | 7557607 | ||
chr8:7557614
|
C | A | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.481G>T | p.Val161Leu | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 481/1395 | 481/1395 | 161/464 | chr8 | 7557614 | ||
chr8:7558336
|
G | A | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.424C>T | p.His142Tyr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/4 | 424/1395 | 424/1395 | 142/464 | chr8 | 7558336 | ||
chr8:7558337
|
C | A | 14 | a0001a0002a0003others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
missense_variant | MODERATE | c.423G>T | p.Glu141Asp | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/4 | 423/1395 | 423/1395 | 141/464 | chr8 | 7558337 | ||
chr8:7558415
|
G | C | 16 | a0001a0002a0003others(13): Show | 17 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(14): Show |
missense_variant | MODERATE | c.345C>G | p.Asn115Lys | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/4 | 345/1395 | 345/1395 | 115/464 | chr8 | 7558415 | ||
chr8:7558899
|
G | T | 1 | a0012 | 1 | HG03195.hp1 | missense_variant | MODERATE | c.319C>A | p.Pro107Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/4 | 319/1395 | 319/1395 | 107/464 | chr8 | 7558899 | ||
chr8:7558952
|
G | C | 8 | a0001a0007a0010others(5): Show | 9 | HG01517.hp2 HG02738.hp1 HG02738.hp2 others(6): Show |
missense_variant | MODERATE | c.266C>G | p.Ala89Gly | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/4 | 266/1395 | 266/1395 | 89/464 | chr8 | 7558952 | ||
chr8:7558965
|
A | G | 6 | a0001a0003a0004others(3): Show | 7 | HG01517.hp2 HG02738.hp1 HG02738.hp2 others(4): Show |
missense_variant | MODERATE | c.253T>C | p.Trp85Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/4 | 253/1395 | 253/1395 | 85/464 | chr8 | 7558965 | ||
chr8:7559000
|
AAGGTCGC others(5705): Show |
A | 1 | a0002 | 1 | NA19043.hp2 | exon_loss_variant | HIGH | c.-5000_217del | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/4 | 217/1395 | chr8 | 7559000 | |||||
chr8:7559619
|
A | C | 13 | a0001a0003a0004others(10): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
missense_variant | MODERATE | c.94T>G | p.Ser32Ala | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/4 | 94/1395 | 94/1395 | 32/464 | chr8 | 7559619 | ||
chr8:7559633
|
G | C | 1 | a0016 | 1 | NA20129.hp1 | missense_variant | MODERATE | c.80C>G | p.Pro27Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/4 | 80/1395 | 80/1395 | 27/464 | chr8 | 7559633 | ||
chr8:7559636
|
G | A | 1 | a0017 | 1 | NA20129.hp2 | missense_variant | MODERATE | c.77C>T | p.Ala26Val | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/4 | 77/1395 | 77/1395 | 26/464 | chr8 | 7559636 |
chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8:7556826
|
G | A | 9 | a0001c0001a0003c0002a0004c0003others(6): Show | 10 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(7): Show |
synonymous_variant | LOW | c.1269C>T | p.Phe423Phe | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1269/1395 | 1269/1395 | 423/464 | chr8 | 7556826 | ||
chr8:7556865
|
G | C | 14 | a0001c0001a0002c0017a0003c0002others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
synonymous_variant | LOW | c.1230C>G | p.Ala410Ala | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1230/1395 | 1230/1395 | 410/464 | chr8 | 7556865 | ||
chr8:7556982
|
A | G | 1 | a0004c0003 | 1 | NA18998.hp1 | synonymous_variant | LOW | c.1113T>C | p.Pro371Pro | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1113/1395 | 1113/1395 | 371/464 | chr8 | 7556982 | ||
chr8:7557012
|
C | G | 1 | a0005c0005 | 1 | NA18952.hp1 | synonymous_variant | LOW | c.1083G>C | p.Arg361Arg | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1083/1395 | 1083/1395 | 361/464 | chr8 | 7557012 | ||
chr8:7557078
|
T | C | 1 | a0008c0007 | 1 | NA18952.hp2 | synonymous_variant | LOW | c.1017A>G | p.Glu339Glu | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1017/1395 | 1017/1395 | 339/464 | chr8 | 7557078 | ||
chr8:7557093
|
C | T | 1 | a0011c0010 | 1 | HG03195.hp2 | synonymous_variant | LOW | c.1002G>A | p.Pro334Pro | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 1002/1395 | 1002/1395 | 334/464 | chr8 | 7557093 | ||
chr8:7557396
|
A | G | 14 | a0001c0001a0002c0017a0003c0002others(11): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
synonymous_variant | LOW | c.699T>C | p.Pro233Pro | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 699/1395 | 699/1395 | 233/464 | chr8 | 7557396 | ||
chr8:7557483
|
T | A | 12 | a0001c0001a0002c0017a0003c0002others(9): Show | 13 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(10): Show |
synonymous_variant | LOW | c.612A>T | p.Thr204Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 612/1395 | 612/1395 | 204/464 | chr8 | 7557483 | ||
chr8:7557582
|
G | A | 2 | a0002c0017a0016c0015 | 2 | NA19043.hp2 NA20129.hp1 |
synonymous_variant | LOW | c.513C>T | p.Thr171Thr | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 513/1395 | 513/1395 | 171/464 | chr8 | 7557582 | ||
chr8:7557585
|
A | T | 13 | a0001c0001a0002c0017a0003c0002others(10): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
synonymous_variant | LOW | c.510T>A | p.Ala170Ala | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 510/1395 | 510/1395 | 170/464 | chr8 | 7557585 | ||
chr8:7557588
|
T | G | 13 | a0001c0001a0002c0017a0003c0002others(10): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
synonymous_variant | LOW | c.507A>C | p.Ser169Ser | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 4/4 | 507/1395 | 507/1395 | 169/464 | chr8 | 7557588 | ||
chr8:7558340
|
G | A | 15 | a0001c0001a0002c0017a0003c0002others(12): Show | 16 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(13): Show |
synonymous_variant | LOW | c.420C>T | p.Ser140Ser | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/4 | 420/1395 | 420/1395 | 140/464 | chr8 | 7558340 | ||
chr8:7558367
|
C | T | 2 | a0002c0017a0016c0015 | 2 | NA19043.hp2 NA20129.hp1 |
synonymous_variant | LOW | c.393G>A | p.Pro131Pro | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/4 | 393/1395 | 393/1395 | 131/464 | chr8 | 7558367 |
chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|
chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8:7557698
|
A | T | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-36T>A | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557698 | ||||||
chr8:7557700
|
G | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-38C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557700 | ||||||
chr8:7557725
|
A | G | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-63T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557725 | ||||||
chr8:7557728
|
T | C | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-66A>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557728 | ||||||
chr8:7557803
|
AT | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-142delA | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557803 | ||||||
chr8:7557845
|
G | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-183C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557845 | ||||||
chr8:7557904
|
T | C | 1 | a0012c0009t0000g0008 | 1 | HG03195.hp1 | intron_variant | MODIFIER | c.433-242A>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557904 | ||||||
chr8:7557974
|
G | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-312C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557974 | ||||||
chr8:7557985
|
G | C | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.433-323C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7557985 | ||||||
chr8:7558026
|
A | C | 9 | a0002c0017t0000g0018a0003c0002t0000g0003a0004c0003t0000g0012others(6): Show | 9 | HG03195.hp1 HG03195.hp2 HG03486.hp2 others(6): Show |
intron_variant | MODIFIER | c.432+302T>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558026 | ||||||
chr8:7558040
|
A | C | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.432+288T>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558040 | ||||||
chr8:7558137
|
C | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.432+191G>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558137 | ||||||
chr8:7558140
|
A | G | 1 | a0010c0011t0000g0001 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.432+188T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558140 | ||||||
chr8:7558154
|
C | G | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.432+174G>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558154 | ||||||
chr8:7558196
|
T | C | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.432+132A>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558196 | ||||||
chr8:7558251
|
G | A | 1 | a0013c0012t0000g0013 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.432+77C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558251 | ||||||
chr8:7558301
|
G | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.432+27C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558301 | ||||||
chr8:7558326
|
A | G | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
splice_donor_variant&intron_variant | HIGH | c.432+2T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 3/3 | chr8 | 7558326 | ||||||
chr8:7558450
|
A | G | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.324-14T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558450 | ||||||
chr8:7558461
|
G | C | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.324-25C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558461 | ||||||
chr8:7558524
|
G | A | 1 | a0012c0009t0000g0008 | 1 | HG03195.hp1 | intron_variant | MODIFIER | c.324-88C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558524 | ||||||
chr8:7558624
|
G | A | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.324-188C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558624 | ||||||
chr8:7558625
|
A | G | 3 | a0001c0001t0000g0005a0001c0001t0000g0011a0007c0006t0000g0010 | 3 | HG01517.hp2 HG02738.hp1 HG02738.hp2 |
intron_variant | MODIFIER | c.324-189T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558625 | ||||||
chr8:7558775
|
T | G | 2 | a0011c0010t0000g0009a0012c0009t0000g0008 | 2 | HG03195.hp1 HG03195.hp2 |
intron_variant | MODIFIER | c.323+120A>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558775 | ||||||
chr8:7558786
|
C | T | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.323+109G>A | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558786 | ||||||
chr8:7558817
|
A | G | 5 | a0006c0004t0000g0002a0008c0007t0000g0006a0010c0011t0000g0001others(2): Show | 5 | HG03195.hp1 HG03195.hp2 NA18952.hp2 others(2): Show |
intron_variant | MODIFIER | c.323+78T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558817 | ||||||
chr8:7558836
|
A | G | 3 | a0001c0001t0000g0005a0001c0001t0000g0011a0007c0006t0000g0010 | 3 | HG01517.hp2 HG02738.hp1 HG02738.hp2 |
intron_variant | MODIFIER | c.323+59T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558836 | ||||||
chr8:7558843
|
C | G | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.323+52G>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558843 | ||||||
chr8:7558849
|
A | G | 1 | a0017c0016t0000g0017 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.323+46T>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558849 | ||||||
chr8:7558856
|
A | C | 6 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(3): Show | 6 | HG01517.hp2 HG02738.hp1 HG02738.hp2 others(3): Show |
intron_variant | MODIFIER | c.323+39T>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558856 | ||||||
chr8:7558858
|
C | T | 15 | a0001c0001t0000g0005a0001c0001t0000g0011a0002c0017t0000g0018others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(12): Show |
intron_variant | MODIFIER | c.323+37G>A | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 2/3 | chr8 | 7558858 | ||||||
chr8:7559098
|
T | C | 1 | a0017c0016t0000g0017 | 1 | NA20129.hp2 | splice_region_variant&intron_variant | LOW | c.124-4A>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559098 | ||||||
chr8:7559201
|
G | A | 14 | a0001c0001t0000g0005a0001c0001t0000g0011a0003c0002t0000g0003others(11): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
intron_variant | MODIFIER | c.124-107C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559201 | ||||||
chr8:7559243
|
G | C | 13 | a0001c0001t0000g0005a0001c0001t0000g0011a0003c0002t0000g0003others(10): Show | 13 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(10): Show |
intron_variant | MODIFIER | c.124-149C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559243 | ||||||
chr8:7559273
|
T | A | 14 | a0001c0001t0000g0005a0001c0001t0000g0011a0003c0002t0000g0003others(11): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
intron_variant | MODIFIER | c.124-179A>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559273 | ||||||
chr8:7559284
|
T | A | 1 | a0004c0003t0000g0012 | 1 | NA18998.hp1 | intron_variant | MODIFIER | c.124-190A>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559284 | ||||||
chr8:7559284
|
T | G | 16 | a0001c0001t0000g0005a0001c0001t0000g0011a0003c0002t0000g0003others(13): Show | 16 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(13): Show |
intron_variant | MODIFIER | c.124-190A>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559284 | ||||||
chr8:7559322
|
G | C | 1 | a0017c0016t0000g0017 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.124-228C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559322 | ||||||
chr8:7559359
|
G | A | 1 | a0007c0006t0000g0010 | 1 | HG01517.hp2 | intron_variant | MODIFIER | c.123+231C>T | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559359 | ||||||
chr8:7559373
|
G | T | 12 | a0001c0001t0000g0005a0001c0001t0000g0011a0003c0002t0000g0003others(9): Show | 12 | HG01517.hp1 HG02738.hp1 HG02738.hp2 others(9): Show |
intron_variant | MODIFIER | c.123+217C>A | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559373 | ||||||
chr8:7559444
|
A | C | 1 | a0010c0011t0000g0001 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.123+146T>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559444 | ||||||
chr8:7559532
|
G | C | 14 | a0001c0001t0000g0005a0001c0001t0000g0011a0003c0002t0000g0003others(11): Show | 14 | HG01517.hp1 HG01517.hp2 HG02738.hp1 others(11): Show |
intron_variant | MODIFIER | c.123+58C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559532 | ||||||
chr8:7559542
|
G | C | 2 | a0001c0001t0000g0011a0004c0003t0000g0012 | 2 | HG02738.hp1 NA18998.hp1 |
intron_variant | MODIFIER | c.123+48C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559542 | ||||||
chr8:7559542
|
GT | G | 15 | a0001c0001t0000g0005a0003c0002t0000g0003a0005c0005t0000g0004others(12): Show | 15 | HG01517.hp1 HG01517.hp2 HG02738.hp2 others(12): Show |
intron_variant | MODIFIER | c.123+47delA | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559542 | ||||||
chr8:7559543
|
T | G | 2 | a0001c0001t0000g0011a0004c0003t0000g0012 | 2 | HG02738.hp1 NA18998.hp1 |
intron_variant | MODIFIER | c.123+47A>C | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559543 | ||||||
chr8:7559583
|
G | C | 1 | a0017c0016t0000g0017 | 1 | NA20129.hp2 | splice_region_variant&intron_variant | LOW | c.123+7C>G | FAM90A7 | ENSG00000285975.1 | transcript | ENST00000650288.1 | protein_coding | 1/3 | chr8 | 7559583 |