Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 3170 |
| ensemblid | ENSG00000125798.15 |
| hgncid | 5022 |
| symbol | FOXA2 |
| name | forkhead box A2 |
| refseq_nuc | NM_021784.5 |
| refseq_prot | NP_068556.2 |
| ensembl_nuc | ENST00000419308.7 |
| ensembl_prot | ENSP00000400341.3 |
| mane_status | MANE Select |
| chr | chr20 |
| start | 22580998 |
| end | 22584572 |
| strand | - |
| ver | v1.2 |
| region | chr20:22580998-22584572 |
| region5000 | chr20:22575998-22589572 |
| regionname0 | FOXA2_chr20_22580998_22584572 |
| regionname5000 | FOXA2_chr20_22575998_22589572 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 463 | 359 | 92 | 60 | 153 | 12 | 42 | 112 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0002 | 0/0 | 463 | 4 | 0 | 4 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0003 | 0/0 | 463 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0004 | 0/0 | 463 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0005 | 0/0 | 463 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0006 | 0/0 | 463 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0007 | 0/0 | 463 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| a0008 | 0/0 | 463 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | MHSAS others(458): Show |
chr20 | 22575998 | 22589572 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 1389 | 241 | 47 | 47 | 101 | 12 | 34 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0002 | 0/0 | 1389 | 64 | 13 | 1 | 45 | 0 | 5 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0003 | 0/0 | 1389 | 42 | 32 | 4 | 6 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0004 | 0/0 | 1389 | 7 | 0 | 7 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0007 | 0/0 | 1389 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0011 | 0/0 | 1389 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0013 | 0/0 | 1389 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0015 | 0/0 | 1389 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0001c0016 | 0/0 | 1389 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0002c0006 | 0/0 | 1389 | 4 | 0 | 4 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0003c0005 | 0/0 | 1389 | 4 | 4 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0004c0012 | 0/0 | 1389 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0005c0010 | 0/0 | 1389 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0006c0008 | 0/0 | 1389 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0007c0014 | 0/0 | 1389 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 | ||
| a0008c0009 | 0/0 | 1389 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ATGCA others(1384): Show |
chr20 | 22575998 | 22589572 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 2538 | 195 | 29 | 40 | 85 | 11 | 30 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0002 | 0/0 | 2541 | 4 | 3 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0004 | 0/0 | 2539 | 12 | 1 | 3 | 5 | 0 | 3 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0005 | 0/0 | 2540 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0008 | 0/0 | 2538 | 5 | 5 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0010 | 0/0 | 2538 | 3 | 0 | 0 | 3 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0011 | 0/0 | 2537 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2532): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0013 | 0/0 | 2539 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0014 | 0/0 | 2538 | 3 | 2 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0016 | 0/0 | 2538 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0017 | 0/0 | 2538 | 2 | 1 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0020 | 0/0 | 2538 | 2 | 1 | 0 | 0 | 1 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0022 | 0/0 | 2538 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0024 | 0/0 | 2541 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0030 | 0/0 | 2538 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0031 | 0/0 | 2539 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0033 | 0/0 | 2539 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0001t0036 | 0/0 | 2538 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0001 | 0/0 | 2538 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0002 | 0/0 | 2541 | 50 | 8 | 1 | 41 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0003 | 0/0 | 2540 | 3 | 0 | 0 | 0 | 0 | 3 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0005 | 0/0 | 2540 | 4 | 4 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0013 | 0/0 | 2539 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0021 | 0/0 | 2542 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2537): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0028 | 0/0 | 2539 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0032 | 0/0 | 2540 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0002t0035 | 0/0 | 2541 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0002 | 0/0 | 2541 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0003 | 0/0 | 2540 | 14 | 8 | 0 | 6 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0006 | 0/0 | 2542 | 5 | 5 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2537): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0007 | 0/0 | 2539 | 5 | 5 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0009 | 0/0 | 2540 | 4 | 4 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0012 | 0/0 | 2541 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0013 | 0/0 | 2539 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0015 | 0/0 | 2541 | 2 | 0 | 2 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0018 | 0/0 | 2540 | 2 | 2 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0019 | 0/0 | 2541 | 2 | 2 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0023 | 0/0 | 2540 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0027 | 0/0 | 2540 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0001c0003t0029 | 0/0 | 2539 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0004t0001 | 0/0 | 2538 | 5 | 0 | 5 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0004t0004 | 0/0 | 2539 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0004t0011 | 0/0 | 2537 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2532): Show |
chr20 | 22575998 | 22589572 |
| a0001c0007t0001 | 0/0 | 2538 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0011t0004 | 0/0 | 2539 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| a0001c0013t0001 | 0/0 | 2538 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0001c0015t0002 | 0/0 | 2541 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0001c0016t0026 | 0/0 | 2540 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0002c0006t0001 | 0/0 | 2538 | 4 | 0 | 4 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0003c0005t0005 | 0/0 | 2540 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2535): Show |
chr20 | 22575998 | 22589572 |
| a0003c0005t0034 | 0/0 | 2541 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2536): Show |
chr20 | 22575998 | 22589572 |
| a0004c0012t0001 | 0/0 | 2538 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0005c0010t0001 | 0/0 | 2538 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0006c0008t0001 | 0/0 | 2538 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0007c0014t0001 | 0/0 | 2538 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2533): Show |
chr20 | 22575998 | 22589572 |
| a0008c0009t0025 | 0/0 | 2539 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | ACTGC others(2534): Show |
chr20 | 22575998 | 22589572 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 183 | 27 | 38 | 79 | 11 | 28 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0001g0004 | 0/0 | 10 | 2 | 2 | 6 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0001g0032 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0001g0047 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0002g0015 | 0/0 | 3 | 2 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0002g0054 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0004g0005 | 0/0 | 9 | 1 | 2 | 4 | 0 | 2 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0004g0021 | 0/0 | 3 | 0 | 1 | 1 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0005g0017 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0008g0007 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0010g0014 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0011g0024 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0013g0048 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0014g0016 | 0/0 | 3 | 2 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0016g0023 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0017g0025 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0020g0028 | 0/0 | 2 | 1 | 0 | 0 | 1 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0022g0029 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0024g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0030g0058 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0031g0066 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0033g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0001t0036g0068 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0002g0002 | 0/0 | 45 | 7 | 1 | 37 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0002g0011 | 0/0 | 4 | 1 | 0 | 3 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0002g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0003g0020 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0005g0010 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0013g0045 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0021g0062 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0021g0064 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0028g0056 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0032g0067 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0002t0035g0063 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0002g0039 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0003g0003 | 0/0 | 13 | 7 | 0 | 6 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0003g0050 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0006g0008 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0007g0009 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0007g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0009g0018 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0009g0046 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0012g0019 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0013g0040 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0015g0022 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0018g0026 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0019g0027 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0023g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0027g0041 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0003t0029g0049 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0004t0001g0006 | 0/0 | 5 | 0 | 5 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0004t0004g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0004t0011g0052 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0007t0001g0031 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0011t0004g0065 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0013t0001g0037 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0015t0002g0043 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0001c0016t0026g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0002c0006t0001g0013 | 0/0 | 3 | 0 | 3 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0002c0006t0001g0053 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0003c0005t0005g0012 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0003c0005t0034g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0004c0012t0001g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0005c0010t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0006c0008t0001g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0007c0014t0001g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| a0008c0009t0025g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00099 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00280 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00323 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00408 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00408 | hp2 | a0004 | c0012 | t0001 | g0036 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00438 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00438 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00544 | hp2 | a0001 | c0002 | t0002 | g0011 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00558 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00597 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00597 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00609 | hp1 | a0001 | c0001 | t0004 | g0005 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00609 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00621 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00621 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00642 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00673 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00735 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00738 | hp1 | a0001 | c0003 | t0015 | g0022 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00738 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00741 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG00741 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01069 | hp2 | a0001 | c0004 | t0001 | g0006 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01070 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01070 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01071 | hp1 | a0001 | c0004 | t0001 | g0006 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01071 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01081 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01081 | hp2 | a0002 | c0006 | t0001 | g0053 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01099 | hp2 | a0001 | c0004 | t0004 | g0060 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01106 | hp1 | a0001 | c0001 | t0004 | g0021 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01106 | hp2 | a0001 | c0004 | t0001 | g0006 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01109 | hp1 | a0001 | c0003 | t0027 | g0041 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01109 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01167 | hp1 | a0001 | c0003 | t0023 | g0030 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01167 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01169 | hp1 | a0001 | c0003 | t0015 | g0022 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01169 | hp2 | a0001 | c0001 | t0036 | g0068 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01175 | hp1 | a0001 | c0001 | t0017 | g0025 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01175 | hp2 | a0001 | c0002 | t0002 | g0002 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01192 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01243 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01243 | hp2 | a0001 | c0001 | t0014 | g0016 | AMR | PUR | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01255 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01255 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01257 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01258 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01358 | hp1 | a0001 | c0004 | t0001 | g0006 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01358 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01361 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01361 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01433 | hp1 | a0002 | c0006 | t0001 | g0013 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01433 | hp2 | a0001 | c0001 | t0004 | g0005 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01496 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01496 | hp2 | a0001 | c0004 | t0001 | g0006 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01515 | hp2 | a0001 | c0001 | t0020 | g0028 | EUR | IBS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01516 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01516 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01517 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01517 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01884 | hp1 | a0001 | c0003 | t0013 | g0040 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01884 | hp2 | a0001 | c0003 | t0007 | g0009 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01891 | hp1 | a0001 | c0002 | t0013 | g0045 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01891 | hp2 | a0001 | c0001 | t0005 | g0017 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01952 | hp2 | a0002 | c0006 | t0001 | g0013 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01975 | hp1 | a0001 | c0013 | t0001 | g0037 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01975 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01978 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01978 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01981 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02027 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02027 | hp2 | a0001 | c0002 | t0002 | g0011 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02040 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0004 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02055 | hp2 | a0001 | c0003 | t0006 | g0008 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02056 | hp2 | a0001 | c0003 | t0003 | g0003 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02071 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02080 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02080 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02083 | hp1 | a0001 | c0003 | t0003 | g0003 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02083 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02129 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02129 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02132 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02132 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02135 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02145 | hp1 | a0001 | c0001 | t0001 | g0004 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02145 | hp2 | a0001 | c0003 | t0007 | g0009 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02148 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02148 | hp2 | a0001 | c0004 | t0011 | g0052 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02165 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02165 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | CDX | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02257 | hp1 | a0001 | c0003 | t0006 | g0008 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02257 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02258 | hp1 | a0001 | c0003 | t0007 | g0009 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02258 | hp2 | a0001 | c0003 | t0009 | g0018 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02280 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02280 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02293 | hp1 | a0002 | c0006 | t0001 | g0013 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02451 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02451 | hp2 | a0001 | c0003 | t0006 | g0008 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02523 | hp1 | a0001 | c0003 | t0003 | g0003 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02523 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | KHV | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02572 | hp2 | a0001 | c0002 | t0002 | g0011 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02602 | hp1 | a0001 | c0002 | t0028 | g0056 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02602 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02615 | hp1 | a0001 | c0001 | t0008 | g0007 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02615 | hp2 | a0001 | c0002 | t0002 | g0002 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02622 | hp1 | a0001 | c0003 | t0003 | g0003 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02622 | hp2 | a0001 | c0003 | t0006 | g0008 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02630 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02630 | hp2 | a0001 | c0003 | t0003 | g0003 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02647 | hp1 | a0001 | c0001 | t0013 | g0048 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02647 | hp2 | a0001 | c0001 | t0004 | g0005 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02683 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02698 | hp1 | a0001 | c0002 | t0003 | g0020 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02698 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02717 | hp1 | a0001 | c0002 | t0002 | g0002 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02717 | hp2 | a0001 | c0003 | t0003 | g0050 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02723 | hp1 | a0001 | c0003 | t0003 | g0003 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02723 | hp2 | a0003 | c0005 | t0005 | g0012 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02735 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02738 | hp1 | a0001 | c0002 | t0003 | g0020 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02738 | hp2 | a0001 | c0011 | t0004 | g0065 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02809 | hp1 | a0001 | c0001 | t0008 | g0007 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02809 | hp2 | a0003 | c0005 | t0005 | g0012 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02818 | hp1 | a0001 | c0001 | t0002 | g0015 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02818 | hp2 | a0001 | c0001 | t0005 | g0017 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02886 | hp1 | a0001 | c0001 | t0008 | g0007 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02886 | hp2 | a0001 | c0001 | t0002 | g0054 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02895 | hp1 | a0001 | c0003 | t0003 | g0003 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02895 | hp2 | a0003 | c0005 | t0005 | g0012 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02896 | hp1 | a0001 | c0003 | t0018 | g0026 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02896 | hp2 | a0001 | c0001 | t0014 | g0016 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02897 | hp1 | a0001 | c0003 | t0003 | g0003 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02897 | hp2 | a0001 | c0003 | t0018 | g0026 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02922 | hp1 | a0001 | c0002 | t0002 | g0002 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02922 | hp2 | a0001 | c0003 | t0003 | g0003 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02965 | hp2 | a0001 | c0003 | t0002 | g0039 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02970 | hp1 | a0001 | c0003 | t0007 | g0009 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02970 | hp2 | a0001 | c0002 | t0002 | g0002 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02976 | hp1 | a0001 | c0001 | t0008 | g0007 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02976 | hp2 | a0001 | c0002 | t0005 | g0010 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0047 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03017 | hp2 | a0001 | c0007 | t0001 | g0031 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03098 | hp2 | a0001 | c0003 | t0007 | g0055 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03130 | hp2 | a0001 | c0003 | t0009 | g0046 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03139 | hp1 | a0001 | c0003 | t0006 | g0008 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03139 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03195 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03195 | hp2 | a0001 | c0001 | t0005 | g0017 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03209 | hp1 | a0001 | c0003 | t0029 | g0049 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03209 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03225 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03225 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03239 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03239 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03453 | hp1 | a0001 | c0001 | t0008 | g0007 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03453 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03486 | hp1 | a0001 | c0002 | t0005 | g0010 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03486 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03490 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03492 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03516 | hp1 | a0001 | c0002 | t0005 | g0010 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03516 | hp2 | a0001 | c0003 | t0019 | g0027 | AFR | ESN | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03540 | hp1 | a0001 | c0003 | t0019 | g0027 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03540 | hp2 | a0001 | c0002 | t0002 | g0002 | AFR | GWD | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03579 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03654 | hp1 | a0001 | c0001 | t0004 | g0005 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03654 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03669 | hp1 | a0001 | c0001 | t0001 | g0032 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03669 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03688 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03704 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03831 | hp1 | a0001 | c0002 | t0003 | g0020 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03831 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03834 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03834 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03927 | hp1 | a0001 | c0001 | t0031 | g0066 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03927 | hp2 | a0001 | c0001 | t0004 | g0021 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03942 | hp2 | a0001 | c0001 | t0004 | g0005 | SAS | BEB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG04115 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG04115 | hp2 | a0001 | c0002 | t0035 | g0063 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG04204 | hp2 | a0001 | c0015 | t0002 | g0043 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG04228 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | STU | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18522 | hp2 | a0001 | c0001 | t0014 | g0016 | AFR | YRI | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18612 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | CHB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18612 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18747 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18906 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18906 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18939 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18939 | hp2 | a0005 | c0010 | t0001 | g0035 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18941 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18941 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18942 | hp1 | a0001 | c0001 | t0016 | g0023 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18942 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18945 | hp2 | a0001 | c0001 | t0010 | g0014 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18946 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18946 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18947 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18947 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18951 | hp1 | a0006 | c0008 | t0001 | g0033 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18951 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18952 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18952 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18953 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18953 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18954 | hp1 | a0001 | c0002 | t0001 | g0044 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18954 | hp2 | a0001 | c0001 | t0011 | g0024 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18960 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18962 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18962 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18964 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18964 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18969 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18969 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18970 | hp2 | a0007 | c0014 | t0001 | g0042 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18971 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18972 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18972 | hp2 | a0008 | c0009 | t0025 | g0034 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18974 | hp2 | a0001 | c0002 | t0002 | g0011 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18975 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18975 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18977 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18979 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18979 | hp2 | a0001 | c0001 | t0004 | g0005 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18981 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18981 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18982 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18982 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18983 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18983 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18986 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18986 | hp2 | a0001 | c0001 | t0022 | g0029 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18991 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18991 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18992 | hp1 | a0001 | c0016 | t0026 | g0057 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18992 | hp2 | a0001 | c0001 | t0004 | g0021 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18995 | hp2 | a0001 | c0001 | t0022 | g0029 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18998 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18998 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19000 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19000 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19001 | hp1 | a0001 | c0002 | t0032 | g0067 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19001 | hp2 | a0001 | c0001 | t0004 | g0005 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19002 | hp1 | a0001 | c0001 | t0010 | g0014 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19002 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19005 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19006 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19006 | hp2 | a0001 | c0001 | t0004 | g0005 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19009 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19010 | hp1 | a0001 | c0001 | t0010 | g0014 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19010 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19043 | hp1 | a0001 | c0001 | t0017 | g0025 | AFR | LWK | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19043 | hp2 | a0001 | c0003 | t0003 | g0003 | AFR | LWK | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19055 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19055 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19056 | hp1 | a0001 | c0001 | t0016 | g0023 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19056 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19057 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19057 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19058 | hp1 | a0001 | c0001 | t0011 | g0024 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19058 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19060 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19064 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19064 | hp2 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19066 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19066 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19067 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19067 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19068 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19070 | hp1 | a0001 | c0003 | t0003 | g0003 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19070 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19072 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19072 | hp2 | a0001 | c0002 | t0021 | g0064 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19077 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19077 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19079 | hp1 | a0001 | c0003 | t0003 | g0003 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19079 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19081 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19081 | hp2 | a0001 | c0001 | t0002 | g0015 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19082 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19082 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19083 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19083 | hp2 | a0001 | c0002 | t0021 | g0062 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19084 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19084 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19085 | hp2 | a0001 | c0001 | t0030 | g0058 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19087 | hp1 | a0001 | c0003 | t0003 | g0003 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19087 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19089 | hp1 | a0001 | c0002 | t0002 | g0002 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19089 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19240 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA19240 | hp2 | a0001 | c0002 | t0002 | g0002 | AFR | YRI | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA20129 | hp1 | a0001 | c0002 | t0002 | g0002 | AFR | ASW | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ASW | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA20905 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01123 | hp1 | a0001 | c0001 | t0024 | g0038 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG01123 | hp2 | a0001 | c0001 | t0004 | g0005 | AMR | CLM | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02109 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02486 | hp1 | a0001 | c0002 | t0005 | g0010 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02486 | hp2 | a0001 | c0001 | t0033 | g0061 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02559 | hp1 | a0001 | c0003 | t0009 | g0018 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG02559 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03471 | hp1 | a0001 | c0003 | t0012 | g0019 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG03471 | hp2 | a0001 | c0001 | t0002 | g0015 | AFR | MSL | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG06807 | hp1 | a0001 | c0001 | t0020 | g0028 | AFR | USA | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| HG06807 | hp2 | a0003 | c0005 | t0034 | g0059 | AFR | USA | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA18955 | hp2 | a0001 | c0002 | t0002 | g0051 | EAS | JPT | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA20300 | hp1 | a0001 | c0003 | t0012 | g0019 | AFR | USA | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA20300 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | USA | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA21309 | hp1 | a0001 | c0003 | t0012 | g0019 | AFR | LWK | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| NA21309 | hp2 | a0001 | c0003 | t0009 | g0018 | AFR | LWK | FOXA2_chr20_22575998_22589572 | FOXA2 | chr20 | 22575998 | 22589572 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr20:22581969 | G | T | 1 | a0002 | 4 | HG01081.hp2 HG01433.hp1 HG01952.hp2 others(1): Show |
missense_variant | MODERATE | c.1273C>A | p.Pro425Thr | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1567/2538 | 1273/1392 | 425/463 | chr20 | 22581969 | |||
| chr20:22582239 | C | G | 1 | a0004 | 1 | HG00408.hp2 | missense_variant | MODERATE | c.1003G>C | p.Ala335Pro | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1297/2538 | 1003/1392 | 335/463 | chr20 | 22582239 | |||
| chr20:22582654 | C | A | 1 | a0007 | 1 | NA18970.hp2 | missense_variant | MODERATE | c.588G>T | p.Met196Ile | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 882/2538 | 588/1392 | 196/463 | chr20 | 22582654 | |||
| chr20:22582883 | C | T | 1 | a0005 | 1 | NA18939.hp2 | missense_variant | MODERATE | c.359G>A | p.Gly120Glu | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 653/2538 | 359/1392 | 120/463 | chr20 | 22582883 | |||
| chr20:22582898 | C | T | 1 | a0008 | 1 | NA18972.hp2 | missense_variant | MODERATE | c.344G>A | p.Ser115Asn | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 638/2538 | 344/1392 | 115/463 | chr20 | 22582898 | |||
| chr20:22582944 | C | G | 1 | a0003 | 4 | HG02723.hp2 HG02809.hp2 HG02895.hp2 others(1): Show |
missense_variant | MODERATE | c.298G>C | p.Ala100Pro | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 592/2538 | 298/1392 | 100/463 | chr20 | 22582944 | |||
| chr20:22582968 | C | T | 1 | a0006 | 1 | NA18951.hp1 | missense_variant | MODERATE | c.274G>A | p.Ala92Thr | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 568/2538 | 274/1392 | 92/463 | chr20 | 22582968 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr20:22582003 | C | T | 1 | a0001c0013 | 1 | HG01975.hp1 | synonymous_variant | LOW | c.1239G>A | p.Gln413Gln | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1533/2538 | 1239/1392 | 413/463 | chr20 | 22582003 | |||
| chr20:22582036 | T | C | 15 | a0001c0001 a0001c0002 a0001c0003 others(12): Show |
365 | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(362): Show |
synonymous_variant | LOW | c.1206A>G | p.Gln402Gln | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1500/2538 | 1206/1392 | 402/463 | chr20 | 22582036 | |||
| chr20:22582327 | C | T | 1 | a0001c0015 | 1 | HG04204.hp2 | synonymous_variant | LOW | c.915G>A | p.Ala305Ala | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1209/2538 | 915/1392 | 305/463 | chr20 | 22582327 | |||
| chr20:22582387 | T | C | 3 | a0001c0002 a0001c0003 a0001c0015 |
107 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(104): Show |
synonymous_variant | LOW | c.855A>G | p.Gly285Gly | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1149/2538 | 855/1392 | 285/463 | chr20 | 22582387 | |||
| chr20:22582390 | G | C | 1 | a0001c0016 | 1 | NA18992.hp1 | synonymous_variant | LOW | c.852C>G | p.Ala284Ala | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 1146/2538 | 852/1392 | 284/463 | chr20 | 22582390 | |||
| chr20:22582879 | C | T | 1 | a0001c0011 | 1 | HG02738.hp2 | synonymous_variant | LOW | c.363G>A | p.Gly121Gly | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 657/2538 | 363/1392 | 121/463 | chr20 | 22582879 | |||
| chr20:22582933 | G | A | 3 | a0001c0002 a0001c0015 a0001c0016 |
66 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(63): Show |
synonymous_variant | LOW | c.309C>T | p.Ala103Ala | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 603/2538 | 309/1392 | 103/463 | chr20 | 22582933 | |||
| chr20:22584261 | A | G | 1 | a0001c0007 | 1 | HG03017.hp2 | synonymous_variant | LOW | c.18T>C | p.Ser6Ser | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | 312/2538 | 18/1392 | 6/463 | chr20 | 22584261 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr20:22581190 | C | T | 1 | a0001c0001t0016 | 2 | NA18942.hp1 NA19056.hp1 |
3_prime_UTR_variant | MODIFIER | c.*660G>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 660 | chr20 | 22581190 | ||||||
| chr20:22581227 | G | A | 3 | a0001c0003t0012 a0001c0003t0019 a0001c0003t0027 |
6 | HG01109.hp1 HG03471.hp1 HG03516.hp2 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*623C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 623 | chr20 | 22581227 | ||||||
| chr20:22581315 | G | A | 1 | a0001c0001t0031 | 1 | HG03927.hp1 | 3_prime_UTR_variant | MODIFIER | c.*535C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 535 | chr20 | 22581315 | ||||||
| chr20:22581322 | G | T | 2 | a0001c0001t0008 a0001c0001t0033 |
6 | HG02486.hp2 HG02615.hp1 HG02809.hp1 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*528C>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 528 | chr20 | 22581322 | ||||||
| chr20:22581333 | C | CT | 23 | a0001c0001t0002 a0001c0001t0005 a0001c0001t0024 others(20): Show |
109 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(106): Show |
3_prime_UTR_variant | MODIFIER | c.*516dupA | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 516 | chr20 | 22581333 | ||||||
| chr20:22581333 | C | CTT | 3 | a0001c0003t0006 a0001c0003t0015 a0001c0003t0023 |
8 | HG00738.hp1 HG01167.hp1 HG01169.hp1 others(5): Show |
3_prime_UTR_variant | MODIFIER | c.*515_*516dupAA | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 516 | chr20 | 22581333 | ||||||
| chr20:22581460 | A | AG | 17 | a0001c0001t0002 a0001c0001t0005 a0001c0001t0024 others(14): Show |
99 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(96): Show |
3_prime_UTR_variant | MODIFIER | c.*389_*390insC | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 389 | chr20 | 22581460 | ||||||
| chr20:22581460 | AT | A | 4 | a0001c0001t0011 a0001c0003t0007 a0001c0003t0023 others(1): Show |
9 | HG01167.hp1 HG01884.hp2 HG02145.hp2 others(6): Show |
3_prime_UTR_variant | MODIFIER | c.*389delA | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 389 | chr20 | 22581460 | ||||||
| chr20:22581461 | T | A | 1 | a0001c0001t0017 | 2 | HG01175.hp1 NA19043.hp1 |
3_prime_UTR_variant | MODIFIER | c.*389A>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 389 | chr20 | 22581461 | ||||||
| chr20:22581461 | T | G | 3 | a0001c0003t0009 a0001c0003t0015 a0001c0016t0026 |
7 | HG00738.hp1 HG01169.hp1 HG02258.hp2 others(4): Show |
3_prime_UTR_variant | MODIFIER | c.*389A>C | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 389 | chr20 | 22581461 | ||||||
| chr20:22581462 | T | G | 1 | a0001c0003t0023 | 1 | HG01167.hp1 | 3_prime_UTR_variant | MODIFIER | c.*388A>C | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 388 | chr20 | 22581462 | ||||||
| chr20:22581588 | C | CT | 5 | a0001c0001t0005 a0001c0002t0005 a0001c0002t0028 others(2): Show |
12 | HG01891.hp2 HG02486.hp1 HG02602.hp1 others(9): Show |
3_prime_UTR_variant | MODIFIER | c.*261dupA | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 261 | chr20 | 22581588 | ||||||
| chr20:22581591 | T | C | 1 | a0001c0003t0029 | 1 | HG03209.hp1 | 3_prime_UTR_variant | MODIFIER | c.*259A>G | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 259 | chr20 | 22581591 | ||||||
| chr20:22581596 | T | A | 2 | a0001c0003t0019 a0001c0003t0027 |
3 | HG01109.hp1 HG03516.hp2 HG03540.hp1 |
3_prime_UTR_variant | MODIFIER | c.*254A>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 254 | chr20 | 22581596 | ||||||
| chr20:22581605 | ATTCTTTC others(5): Show |
A | 1 | a0001c0003t0029 | 1 | HG03209.hp1 | 3_prime_UTR_variant | MODIFIER | c.*233_*244delAACGGG others(6): Show |
FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 233 | chr20 | 22581605 | ||||||
| chr20:22581621 | C | G | 1 | a0001c0003t0029 | 1 | HG03209.hp1 | 3_prime_UTR_variant | MODIFIER | c.*229G>C | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 229 | chr20 | 22581621 | ||||||
| chr20:22581673 | G | A | 25 | a0001c0001t0002 a0001c0001t0005 a0001c0001t0013 others(22): Show |
101 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(98): Show |
3_prime_UTR_variant | MODIFIER | c.*177C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 177 | chr20 | 22581673 | ||||||
| chr20:22581688 | A | AG | 20 | a0001c0001t0002 a0001c0001t0013 a0001c0001t0024 others(17): Show |
89 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(86): Show |
3_prime_UTR_variant | MODIFIER | c.*161dupC | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 161 | chr20 | 22581688 | ||||||
| chr20:22581704 | G | T | 1 | a0001c0001t0002 | 3 | HG02818.hp1 HG02886.hp2 HG03471.hp2 |
3_prime_UTR_variant | MODIFIER | c.*146C>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 146 | chr20 | 22581704 | ||||||
| chr20:22581718 | G | T | 1 | a0001c0016t0026 | 1 | NA18992.hp1 | 3_prime_UTR_variant | MODIFIER | c.*132C>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 132 | chr20 | 22581718 | ||||||
| chr20:22581731 | A | T | 1 | a0001c0003t0029 | 1 | HG03209.hp1 | 3_prime_UTR_variant | MODIFIER | c.*119T>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 119 | chr20 | 22581731 | ||||||
| chr20:22581733 | T | G | 1 | a0001c0002t0035 | 1 | HG04115.hp2 | 3_prime_UTR_variant | MODIFIER | c.*117A>C | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 117 | chr20 | 22581733 | ||||||
| chr20:22581736 | T | TGCTCCCT others(4): Show |
1 | a0001c0003t0029 | 1 | HG03209.hp1 | 3_prime_UTR_variant | MODIFIER | c.*113_*114insCGCAAG others(5): Show |
FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 113 | chr20 | 22581736 | ||||||
| chr20:22581740 | C | T | 1 | a0001c0003t0009 | 4 | HG02258.hp2 HG02559.hp1 HG03130.hp2 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*110G>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 110 | chr20 | 22581740 | ||||||
| chr20:22581796 | A | G | 1 | a0001c0001t0010 | 3 | NA18945.hp2 NA19002.hp1 NA19010.hp1 |
3_prime_UTR_variant | MODIFIER | c.*54T>C | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 54 | chr20 | 22581796 | ||||||
| chr20:22581800 | G | A | 31 | a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 others(28): Show |
128 | HG00544.hp2 HG00558.hp1 HG00597.hp2 others(125): Show |
3_prime_UTR_variant | MODIFIER | c.*50C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 2/2 | 50 | chr20 | 22581800 | ||||||
| chr20:22584343 | T | A | 1 | a0001c0001t0020 | 2 | HG01515.hp2 HG06807.hp1 |
5_prime_UTR_variant | MODIFIER | c.-65A>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | 65 | chr20 | 22584343 | ||||||
| chr20:22584344 | A | T | 2 | a0001c0003t0015 a0001c0003t0023 |
3 | HG00738.hp1 HG01167.hp1 HG01169.hp1 |
5_prime_UTR_variant | MODIFIER | c.-66T>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | 66 | chr20 | 22584344 | ||||||
| chr20:22584388 | T | C | 1 | a0001c0001t0030 | 1 | NA19085.hp2 | 5_prime_UTR_variant | MODIFIER | c.-110A>G | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | 110 | chr20 | 22584388 | ||||||
| chr20:22584467 | T | TG | 9 | a0001c0001t0004 a0001c0001t0031 a0001c0001t0033 others(6): Show |
21 | HG00609.hp1 HG01099.hp2 HG01106.hp1 others(18): Show |
5_prime_UTR_variant | MODIFIER | c.-190dupC | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | 190 | chr20 | 22584467 | ||||||
| chr20:22584485 | G | A | 1 | a0001c0001t0022 | 2 | NA18986.hp2 NA18995.hp2 |
5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-207C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | chr20 | 22584485 | |||||||
| chr20:22584552 | G | A | 1 | a0001c0001t0036 | 1 | HG01169.hp2 | 5_prime_UTR_variant | MODIFIER | c.-274C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/2 | 274 | chr20 | 22584552 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr20:22583188 | G | A | 1 | a0001c0003t0009g0046 | 1 | HG03130.hp2 | intron_variant | MODIFIER | c.88-34C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583188 | |||||||
| chr20:22583259 | C | A | 1 | a0001c0001t0001g0047 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.88-105G>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583259 | |||||||
| chr20:22583355 | G | T | 1 | a0001c0001t0001g0032 | 1 | HG03669.hp1 | intron_variant | MODIFIER | c.88-201C>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583355 | |||||||
| chr20:22583552 | A | T | 1 | a0001c0001t0013g0048 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.88-398T>A | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583552 | |||||||
| chr20:22583683 | T | C | 1 | a0001c0001t0013g0048 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.87+509A>G | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583683 | |||||||
| chr20:22583695 | G | A | 3 | a0001c0003t0003g0003 a0001c0003t0003g0050 a0001c0003t0029g0049 |
15 | HG02056.hp2 HG02083.hp1 HG02523.hp1 others(12): Show |
intron_variant | MODIFIER | c.87+497C>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583695 | |||||||
| chr20:22583783 | T | C | 1 | a0001c0003t0003g0050 | 1 | HG02717.hp2 | intron_variant | MODIFIER | c.87+409A>G | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22583783 | |||||||
| chr20:22584096 | C | A | 2 | a0001c0002t0002g0051 a0001c0002t0021g0064 |
2 | NA18955.hp2 NA19072.hp2 |
intron_variant | MODIFIER | c.87+96G>T | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22584096 | |||||||
| chr20:22584101 | T | TG | 13 | a0001c0001t0001g0004 a0001c0001t0002g0054 a0001c0001t0004g0021 others(10): Show |
27 | HG00544.hp2 HG00558.hp2 HG00621.hp1 others(24): Show |
intron_variant | MODIFIER | c.87+90dupC | FOXA2 | ENSG00000125798.15 | transcript | ENST00000419308.7 | protein_coding | 1/1 | chr20 | 22584101 |