Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 729447 |
| ensemblid | ENSG00000189064.9 |
| hgncid | 4099 |
| symbol | GAGE2A |
| name | G antigen 2A |
| refseq_nuc | NM_001127212.4 |
| refseq_prot | NP_001120684.1 |
| ensembl_nuc | ENST00000362097.2 |
| ensembl_prot | ENSP00000355421.1 |
| mane_status | MANE Select |
| chr | chrX |
| start | 49589496 |
| end | 49596824 |
| strand | + |
| ver | v1.2 |
| region | chrX:49589496-49596824 |
| region5000 | chrX:49584496-49601824 |
| regionname0 | GAGE2A_chrX_49589496_49596824 |
| regionname5000 | GAGE2A_chrX_49584496_49601824 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 117 | 55 | 25 | 11 | 13 | 1 | 5 | 6 | GAGE2A_chrX_49584496_49601824 | GAGE2A | MSWRG others(112): Show |
chrX | 49584496 | 49601824 |
| a0002 | 0/0 | 116 | 53 | 2 | 13 | 25 | 3 | 10 | 20 | GAGE2A_chrX_49584496_49601824 | GAGE2A | MSWRG others(111): Show |
chrX | 49584496 | 49601824 |
| a0003 | 1/0 | 116 | 20 | 8 | 2 | 9 | 0 | 0 | 8 | GAGE2A_chrX_49584496_49601824 | GAGE2A | MSWRG others(111): Show |
chrX | 49584496 | 49601824 |
| a0004 | 0/0 | 116 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | MSWRG others(111): Show |
chrX | 49584496 | 49601824 |
| a0005 | 0/0 | 117 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | MSWRG others(112): Show |
chrX | 49584496 | 49601824 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002 | 0/0 | 351 | 32 | 10 | 8 | 8 | 1 | 5 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 | ||
| a0001c0004 | 0/0 | 351 | 11 | 9 | 1 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 | ||
| a0001c0005 | 0/0 | 351 | 8 | 3 | 1 | 4 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 | ||
| a0001c0006 | 0/0 | 351 | 2 | 1 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 | ||
| a0001c0008 | 0/0 | 351 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 | ||
| a0001c0009 | 0/0 | 351 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 | ||
| a0002c0001 | 0/0 | 348 | 53 | 2 | 13 | 25 | 3 | 10 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(343): Show |
chrX | 49584496 | 49601824 | ||
| a0003c0003 | 1/0 | 348 | 20 | 8 | 2 | 9 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(343): Show |
chrX | 49584496 | 49601824 | ||
| a0004c0007 | 0/0 | 348 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(343): Show |
chrX | 49584496 | 49601824 | ||
| a0005c0010 | 0/0 | 351 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | ATGAG others(346): Show |
chrX | 49584496 | 49601824 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002t0001 | 0/0 | 561 | 32 | 10 | 8 | 8 | 1 | 5 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0001c0004t0001 | 0/0 | 561 | 7 | 5 | 1 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0001c0004t0004 | 0/0 | 559 | 4 | 4 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(554): Show |
chrX | 49584496 | 49601824 |
| a0001c0005t0001 | 0/0 | 561 | 7 | 2 | 1 | 4 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0001c0005t0006 | 0/0 | 561 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0001c0006t0001 | 0/0 | 561 | 2 | 1 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0001c0008t0001 | 0/0 | 561 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0001c0009t0001 | 0/0 | 561 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| a0002c0001t0001 | 0/0 | 558 | 36 | 2 | 10 | 15 | 3 | 6 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(553): Show |
chrX | 49584496 | 49601824 |
| a0002c0001t0002 | 0/0 | 558 | 15 | 0 | 3 | 10 | 0 | 2 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(553): Show |
chrX | 49584496 | 49601824 |
| a0002c0001t0005 | 0/0 | 558 | 2 | 0 | 0 | 0 | 0 | 2 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(553): Show |
chrX | 49584496 | 49601824 |
| a0003c0003t0001 | 1/0 | 558 | 9 | 3 | 1 | 4 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(553): Show |
chrX | 49584496 | 49601824 |
| a0003c0003t0003 | 0/0 | 558 | 11 | 5 | 1 | 5 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GCCTT others(553): Show |
chrX | 49584496 | 49601824 |
| a0004c0007t0002 | 0/0 | 558 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(553): Show |
chrX | 49584496 | 49601824 |
| a0005c0010t0001 | 0/0 | 561 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | GTCTT others(556): Show |
chrX | 49584496 | 49601824 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002t0001g0002 | 0/0 | 7 | 1 | 3 | 1 | 1 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0006 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0013 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0016 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0048 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0050 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0056 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0057 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0061 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0062 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0063 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0064 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0075 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0002t0001g0077 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0001g0007 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0001g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0001g0053 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0001g0054 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0001g0071 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0001g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0004t0004g0004 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0066 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0069 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0073 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0001g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0005t0006g0018 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0006t0001g0051 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0006t0001g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0008t0001g0068 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0001c0009t0001g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0001 | 0/0 | 17 | 1 | 2 | 9 | 3 | 2 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0008 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0009 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0010 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0014 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0015 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0027 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0028 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0029 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0030 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0001g0085 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0003 | 0/0 | 5 | 0 | 3 | 2 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0005 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0032 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0037 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0002g0084 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0005g0080 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0002c0001t0005g0081 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0022 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0024 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0041 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0001g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0011 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0012 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0039 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0040 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0042 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0003c0003t0003g0086 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0004c0007t0002g0082 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| a0005c0010t0001g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0002 | c0001 | t0001 | g0001 | EUR | GBR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00099 | hp2 | a0001 | c0002 | t0001 | g0002 | EUR | GBR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00140 | hp1 | a0002 | c0001 | t0001 | g0001 | EUR | GBR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00423 | hp1 | a0002 | c0001 | t0002 | g0035 | EAS | CHS | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00423 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | CHS | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00438 | hp1 | a0002 | c0001 | t0002 | g0003 | EAS | CHS | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00438 | hp2 | a0001 | c0002 | t0001 | g0016 | EAS | CHS | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00639 | hp1 | a0002 | c0001 | t0001 | g0015 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00639 | hp2 | a0001 | c0004 | t0001 | g0071 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00741 | hp1 | a0001 | c0006 | t0001 | g0051 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG00741 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01069 | hp1 | a0001 | c0002 | t0001 | g0062 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01167 | hp1 | a0001 | c0002 | t0001 | g0077 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01175 | hp1 | a0002 | c0001 | t0001 | g0008 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01175 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01256 | hp1 | a0001 | c0005 | t0001 | g0074 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01346 | hp1 | a0002 | c0001 | t0001 | g0001 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01346 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01361 | hp1 | a0002 | c0001 | t0001 | g0008 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01361 | hp2 | a0002 | c0001 | t0001 | g0029 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01433 | hp1 | a0002 | c0001 | t0001 | g0027 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01515 | hp1 | a0004 | c0007 | t0002 | g0082 | EUR | IBS | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01884 | hp1 | a0001 | c0002 | t0001 | g0058 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01884 | hp2 | a0001 | c0004 | t0004 | g0004 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01975 | hp1 | a0003 | c0003 | t0001 | g0024 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01975 | hp2 | a0001 | c0002 | t0001 | g0060 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01978 | hp1 | a0002 | c0001 | t0001 | g0010 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01978 | hp2 | a0002 | c0001 | t0002 | g0003 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02004 | hp1 | a0005 | c0010 | t0001 | g0065 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02004 | hp2 | a0001 | c0002 | t0001 | g0013 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02055 | hp1 | a0001 | c0004 | t0001 | g0007 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02056 | hp2 | a0001 | c0002 | t0001 | g0049 | EAS | KHV | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02074 | hp2 | a0001 | c0002 | t0001 | g0076 | EAS | KHV | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02080 | hp1 | a0002 | c0001 | t0002 | g0036 | EAS | KHV | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02080 | hp2 | a0001 | c0002 | t0001 | g0063 | EAS | KHV | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02083 | hp1 | a0002 | c0001 | t0002 | g0003 | EAS | KHV | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02129 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | KHV | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02148 | hp1 | a0002 | c0001 | t0001 | g0001 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02148 | hp2 | a0003 | c0003 | t0003 | g0042 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02165 | hp1 | a0001 | c0005 | t0001 | g0069 | EAS | CDX | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02165 | hp2 | a0001 | c0002 | t0001 | g0044 | EAS | CDX | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02257 | hp1 | a0003 | c0003 | t0003 | g0011 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02257 | hp2 | a0001 | c0002 | t0001 | g0002 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02293 | hp1 | a0002 | c0001 | t0001 | g0014 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02293 | hp2 | a0001 | c0002 | t0001 | g0013 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02300 | hp1 | a0002 | c0001 | t0001 | g0026 | AMR | PEL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02572 | hp1 | a0001 | c0002 | t0001 | g0006 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02615 | hp1 | a0001 | c0002 | t0001 | g0059 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02615 | hp2 | a0001 | c0005 | t0001 | g0067 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02622 | hp1 | a0002 | c0001 | t0001 | g0083 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02622 | hp2 | a0001 | c0004 | t0001 | g0072 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02683 | hp1 | a0002 | c0001 | t0002 | g0032 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02683 | hp2 | a0001 | c0002 | t0001 | g0057 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02723 | hp1 | a0002 | c0001 | t0001 | g0001 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02723 | hp2 | a0001 | c0005 | t0006 | g0018 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02738 | hp1 | a0002 | c0001 | t0001 | g0001 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02809 | hp1 | a0003 | c0003 | t0003 | g0011 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02809 | hp2 | a0001 | c0009 | t0001 | g0047 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02886 | hp1 | a0003 | c0003 | t0003 | g0020 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02886 | hp2 | a0001 | c0004 | t0004 | g0004 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02895 | hp1 | a0001 | c0004 | t0004 | g0004 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02965 | hp1 | a0003 | c0003 | t0001 | g0088 | AFR | ESN | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03098 | hp2 | a0001 | c0002 | t0001 | g0055 | AFR | MSL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03195 | hp1 | a0001 | c0004 | t0004 | g0004 | AFR | ESN | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03195 | hp2 | a0001 | c0004 | t0001 | g0054 | AFR | ESN | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03239 | hp1 | a0002 | c0001 | t0001 | g0001 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03239 | hp2 | a0001 | c0002 | t0001 | g0061 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03453 | hp1 | a0001 | c0004 | t0001 | g0007 | AFR | MSL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03453 | hp2 | a0003 | c0003 | t0003 | g0040 | AFR | MSL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03486 | hp1 | a0001 | c0004 | t0001 | g0053 | AFR | MSL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03486 | hp2 | a0001 | c0002 | t0001 | g0006 | AFR | MSL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03490 | hp1 | a0002 | c0001 | t0002 | g0084 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03540 | hp1 | a0001 | c0002 | t0001 | g0006 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03540 | hp2 | a0001 | c0005 | t0001 | g0073 | AFR | GWD | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03669 | hp1 | a0002 | c0001 | t0001 | g0030 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03669 | hp2 | a0002 | c0001 | t0005 | g0081 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03688 | hp2 | a0002 | c0001 | t0001 | g0031 | SAS | STU | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03710 | hp1 | a0001 | c0002 | t0001 | g0075 | SAS | PJL | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG03942 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | BEB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG04115 | hp1 | a0002 | c0001 | t0001 | g0085 | SAS | STU | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG04184 | hp1 | a0002 | c0001 | t0001 | g0028 | SAS | BEB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG04184 | hp2 | a0001 | c0002 | t0001 | g0050 | SAS | BEB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG04228 | hp1 | a0002 | c0001 | t0005 | g0080 | SAS | STU | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18747 | hp2 | a0003 | c0003 | t0001 | g0023 | EAS | CHB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18940 | hp1 | a0003 | c0003 | t0003 | g0012 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18941 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18941 | hp2 | a0002 | c0001 | t0002 | g0034 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18942 | hp1 | a0002 | c0001 | t0002 | g0005 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18942 | hp2 | a0001 | c0005 | t0001 | g0066 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18945 | hp1 | a0002 | c0001 | t0002 | g0005 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18948 | hp1 | a0003 | c0003 | t0003 | g0012 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18952 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18959 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18964 | hp1 | a0002 | c0001 | t0001 | g0038 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18964 | hp2 | a0001 | c0004 | t0001 | g0052 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18965 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18967 | hp1 | a0003 | c0003 | t0003 | g0086 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18972 | hp1 | a0001 | c0005 | t0001 | g0078 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18972 | hp2 | a0003 | c0003 | t0001 | g0017 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18980 | hp1 | a0002 | c0001 | t0002 | g0033 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18980 | hp2 | a0002 | c0001 | t0002 | g0005 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18987 | hp1 | a0003 | c0003 | t0001 | g0021 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18987 | hp2 | a0001 | c0002 | t0001 | g0064 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18992 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18992 | hp2 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA18995 | hp1 | a0002 | c0001 | t0001 | g0019 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19003 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19003 | hp2 | a0002 | c0001 | t0002 | g0037 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19004 | hp1 | a0002 | c0001 | t0001 | g0001 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19043 | hp1 | a0003 | c0003 | t0001 | g0089 | AFR | LWK | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19057 | hp1 | a0003 | c0003 | t0003 | g0043 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19057 | hp2 | a0002 | c0001 | t0001 | g0014 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19062 | hp1 | a0001 | c0005 | t0001 | g0087 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19074 | hp1 | a0002 | c0001 | t0001 | g0009 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19074 | hp2 | a0001 | c0002 | t0001 | g0045 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19080 | hp1 | a0003 | c0003 | t0001 | g0025 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19080 | hp2 | a0003 | c0003 | t0003 | g0046 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19083 | hp1 | a0002 | c0001 | t0001 | g0010 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA19086 | hp1 | a0002 | c0001 | t0001 | g0009 | EAS | JPT | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA20805 | hp1 | a0002 | c0001 | t0001 | g0001 | EUR | TSI | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01123 | hp1 | a0002 | c0001 | t0002 | g0003 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG01123 | hp2 | a0002 | c0001 | t0002 | g0003 | AMR | CLM | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02109 | hp1 | a0003 | c0003 | t0003 | g0039 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02109 | hp2 | a0001 | c0006 | t0001 | g0079 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02486 | hp1 | a0003 | c0003 | t0001 | g0022 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02559 | hp1 | a0001 | c0002 | t0001 | g0056 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| HG02559 | hp2 | a0001 | c0002 | t0001 | g0070 | AFR | ACB | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA20300 | hp1 | a0001 | c0008 | t0001 | g0068 | AFR | USA | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| NA20300 | hp2 | a0001 | c0002 | t0001 | g0048 | AFR | USA | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| homoSapiens | grch38p0 | a0003 | c0003 | t0001 | g0041 | REF | REF | GAGE2A_chrX_49584496_49601824 | GAGE2A | chrX | 49584496 | 49601824 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49590674 | C | CTAT | 2 | a0001 a0005 |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
conservative_inframe_insertion | MODERATE | c.25_27dupTAT | p.Tyr9dup | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/5 | 144/558 | 28/351 | 10/116 | INFO_REALIGN_3_PRIME | chrX | 49590674 | ||
| chrX:49590678 | C | T | 2 | a0001 a0005 |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
missense_variant | MODERATE | c.28C>T | p.Arg10Trp | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/5 | 144/558 | 28/351 | 10/116 | chrX | 49590678 | |||
| chrX:49590702 | G | C | 2 | a0001 a0005 |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
missense_variant | MODERATE | c.52G>C | p.Glu18Gln | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/5 | 168/558 | 52/351 | 18/116 | chrX | 49590702 | |||
| chrX:49591260 | C | T | 2 | a0001 a0005 |
46 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(43): Show |
missense_variant | MODERATE | c.145C>T | p.Arg49Cys | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/5 | 261/558 | 145/351 | 49/116 | chrX | 49591260 | |||
| chrX:49591284 | G | A | 1 | a0001 | 32 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(29): Show |
missense_variant | MODERATE | c.169G>A | p.Glu57Lys | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/5 | 285/558 | 169/351 | 57/116 | chrX | 49591284 | |||
| chrX:49591290 | C | G | 4 | a0001 a0002 a0004 others(1): Show |
110 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(107): Show |
missense_variant | MODERATE | c.175C>G | p.Gln59Glu | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/5 | 291/558 | 175/351 | 59/116 | chrX | 49591290 | |||
| chrX:49591295 | T | G | 1 | a0005 | 1 | HG02004.hp1 | missense_variant | MODERATE | c.180T>G | p.Asp60Glu | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/5 | 296/558 | 180/351 | 60/116 | chrX | 49591295 | |||
| chrX:49594135 | C | G | 2 | a0001 a0004 |
2 | HG01515.hp1 HG02809.hp2 |
missense_variant | MODERATE | c.220C>G | p.His74Asp | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/5 | 336/558 | 220/351 | 74/116 | chrX | 49594135 | |||
| chrX:49594150 | G | C | 1 | a0001 | 2 | HG00741.hp1 HG02109.hp2 |
missense_variant | MODERATE | c.235G>C | p.Gly79Arg | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/5 | 351/558 | 235/351 | 79/116 | chrX | 49594150 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49590692 | A | G | 7 | a0001c0002 a0001c0004 a0001c0005 others(4): Show |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
synonymous_variant | LOW | c.42A>G | p.Arg14Arg | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/5 | 158/558 | 42/351 | 14/116 | chrX | 49590692 | |||
| chrX:49590698 | C | T | 7 | a0001c0002 a0001c0004 a0001c0005 others(4): Show |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
synonymous_variant | LOW | c.48C>T | p.Tyr16Tyr | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/5 | 164/558 | 48/351 | 16/116 | chrX | 49590698 | |||
| chrX:49594209 | G | A | 1 | a0001c0008 | 1 | NA20300.hp1 | synonymous_variant | LOW | c.294G>A | p.Pro98Pro | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/5 | 410/558 | 294/351 | 98/116 | chrX | 49594209 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49589497 | T | C | 1 | a0003c0003t0003 | 11 | HG02109.hp1 HG02148.hp2 HG02257.hp1 others(8): Show |
5_prime_UTR_variant | MODIFIER | c.-115T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/5 | 1154 | chrX | 49589497 | ||||||
| chrX:49589515 | C | G | 1 | a0001c0005t0006 | 1 | HG02723.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-97C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/5 | chrX | 49589515 | |||||||
| chrX:49589595 | A | T | 1 | a0002c0001t0005 | 2 | HG03669.hp2 HG04228.hp1 |
5_prime_UTR_variant | MODIFIER | c.-17A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/5 | 1056 | chrX | 49589595 | ||||||
| chrX:49596740 | A | G | 3 | a0002c0001t0002 a0002c0001t0005 a0004c0007t0002 |
18 | HG00423.hp1 HG00438.hp1 HG01123.hp1 others(15): Show |
3_prime_UTR_variant | MODIFIER | c.*7A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 5/5 | 7 | chrX | 49596740 | ||||||
| chrX:49596815 | CTT | C | 1 | a0001c0004t0004 | 4 | HG01884.hp2 HG02886.hp2 HG02895.hp1 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*83_*84delTT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 5/5 | 83 | chrX | 49596815 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49589624 | T | G | 1 | a0002c0001t0001g0015 | 1 | HG00639.hp1 | intron_variant | MODIFIER | c.-9+21T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589624 | |||||||
| chrX:49589642 | G | C | 1 | a0001c0002t0001g0016 | 1 | HG00438.hp2 | intron_variant | MODIFIER | c.-9+39G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589642 | |||||||
| chrX:49589677 | G | A | 1 | a0003c0003t0001g0017 | 1 | NA18972.hp2 | intron_variant | MODIFIER | c.-9+74G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589677 | |||||||
| chrX:49589704 | C | T | 2 | a0003c0003t0001g0088 a0003c0003t0001g0089 |
2 | HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-9+101C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589704 | |||||||
| chrX:49589715 | G | A | 1 | a0001c0004t0001g0007 | 2 | HG02055.hp1 HG03453.hp1 |
intron_variant | MODIFIER | c.-9+112G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589715 | |||||||
| chrX:49589738 | C | G | 2 | a0003c0003t0001g0088 a0003c0003t0001g0089 |
2 | HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-9+135C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589738 | |||||||
| chrX:49589760 | G | A | 1 | a0001c0005t0006g0018 | 1 | HG02723.hp2 | intron_variant | MODIFIER | c.-9+157G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589760 | |||||||
| chrX:49589829 | G | T | 3 | a0001c0005t0001g0087 a0002c0001t0001g0014 a0003c0003t0003g0086 |
4 | HG02293.hp1 NA18967.hp1 NA19057.hp2 others(1): Show |
intron_variant | MODIFIER | c.-9+226G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589829 | |||||||
| chrX:49589892 | G | A | 1 | a0002c0001t0001g0019 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.-9+289G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589892 | |||||||
| chrX:49589894 | C | T | 3 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 |
3 | HG03490.hp1 HG04115.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.-9+291C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589894 | |||||||
| chrX:49589926 | C | T | 8 | a0002c0001t0001g0015 a0002c0001t0001g0019 a0002c0001t0001g0083 others(5): Show |
8 | HG00639.hp1 HG01515.hp1 HG02622.hp1 others(5): Show |
intron_variant | MODIFIER | c.-9+323C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589926 | |||||||
| chrX:49589929 | C | CG | 5 | a0001c0002t0001g0075 a0001c0002t0001g0076 a0001c0002t0001g0077 others(2): Show |
5 | HG01167.hp1 HG02074.hp2 HG02109.hp2 others(2): Show |
intron_variant | MODIFIER | c.-9+331dupG | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49589929 | ||||||
| chrX:49589930 | G | C | 1 | a0003c0003t0001g0088 | 1 | HG02965.hp1 | intron_variant | MODIFIER | c.-9+327G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589930 | |||||||
| chrX:49589941 | A | G | 49 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(46): Show |
62 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(59): Show |
intron_variant | MODIFIER | c.-9+338A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589941 | |||||||
| chrX:49589961 | G | A | 1 | a0002c0001t0001g0015 | 1 | HG00639.hp1 | intron_variant | MODIFIER | c.-9+358G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589961 | |||||||
| chrX:49589978 | G | C | 41 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(38): Show |
54 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(51): Show |
intron_variant | MODIFIER | c.-9+375G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589978 | |||||||
| chrX:49589985 | G | T | 1 | a0001c0005t0001g0074 | 1 | HG01256.hp1 | intron_variant | MODIFIER | c.-9+382G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589985 | |||||||
| chrX:49589990 | C | CG | 6 | a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0005t0001g0074 others(3): Show |
6 | HG01256.hp1 HG02056.hp2 HG02723.hp2 others(3): Show |
intron_variant | MODIFIER | c.-9+387_-9+388insG | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589990 | |||||||
| chrX:49589991 | C | G | 35 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(32): Show |
48 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(45): Show |
intron_variant | MODIFIER | c.-9+388C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589991 | |||||||
| chrX:49589997 | C | T | 37 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(34): Show |
50 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(47): Show |
intron_variant | MODIFIER | c.-9+394C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49589997 | |||||||
| chrX:49590011 | T | C | 1 | a0002c0001t0005g0080 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.-9+408T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590011 | |||||||
| chrX:49590012 | G | T | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.-9+409G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590012 | |||||||
| chrX:49590013 | C | T | 8 | a0002c0001t0001g0015 a0002c0001t0001g0019 a0002c0001t0001g0083 others(5): Show |
8 | HG00639.hp1 HG01515.hp1 HG02622.hp1 others(5): Show |
intron_variant | MODIFIER | c.-9+410C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590013 | |||||||
| chrX:49590089 | C | T | 1 | a0003c0003t0003g0046 | 1 | NA19080.hp2 | intron_variant | MODIFIER | c.-9+486C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590089 | |||||||
| chrX:49590123 | G | T | 9 | a0001c0002t0001g0070 a0001c0004t0001g0007 a0001c0004t0001g0071 others(6): Show |
13 | HG00639.hp2 HG01884.hp2 HG02055.hp1 others(10): Show |
intron_variant | MODIFIER | c.-9+520G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590123 | |||||||
| chrX:49590142 | G | C | 2 | a0001c0005t0001g0074 a0001c0005t0006g0018 |
2 | HG01256.hp1 HG02723.hp2 |
intron_variant | MODIFIER | c.-8-501G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590142 | |||||||
| chrX:49590160 | A | C | 1 | a0002c0001t0001g0014 | 2 | HG02293.hp1 NA19057.hp2 |
intron_variant | MODIFIER | c.-8-483A>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590160 | |||||||
| chrX:49590168 | AT | A | 2 | a0001c0002t0001g0050 a0001c0002t0001g0075 |
2 | HG03710.hp1 HG04184.hp2 |
intron_variant | MODIFIER | c.-8-474delT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590168 | |||||||
| chrX:49590198 | C | T | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.-8-445C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590198 | |||||||
| chrX:49590250 | C | T | 1 | a0001c0005t0001g0073 | 1 | HG03540.hp2 | intron_variant | MODIFIER | c.-8-393C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590250 | |||||||
| chrX:49590277 | G | T | 40 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(37): Show |
53 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(50): Show |
intron_variant | MODIFIER | c.-8-366G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590277 | |||||||
| chrX:49590381 | C | T | 1 | a0001c0004t0001g0072 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.-8-262C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590381 | |||||||
| chrX:49590532 | C | T | 43 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(40): Show |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
intron_variant | MODIFIER | c.-8-111C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590532 | |||||||
| chrX:49590566 | T | A | 44 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(41): Show |
57 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(54): Show |
intron_variant | MODIFIER | c.-8-77T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590566 | |||||||
| chrX:49590576 | G | C | 80 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(77): Show |
119 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(116): Show |
intron_variant | MODIFIER | c.-8-67G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590576 | |||||||
| chrX:49590604 | G | C | 42 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(39): Show |
55 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(52): Show |
intron_variant | MODIFIER | c.-8-39G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 1/4 | chrX | 49590604 | |||||||
| chrX:49590746 | G | C | 1 | a0003c0003t0003g0039 | 1 | HG02109.hp1 | intron_variant | MODIFIER | c.81+15G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590746 | |||||||
| chrX:49590794 | T | C | 43 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(40): Show |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
intron_variant | MODIFIER | c.81+63T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590794 | |||||||
| chrX:49590826 | C | G | 1 | a0002c0001t0001g0038 | 1 | NA18964.hp1 | intron_variant | MODIFIER | c.81+95C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590826 | |||||||
| chrX:49590845 | T | G | 1 | a0003c0003t0003g0040 | 1 | HG03453.hp2 | intron_variant | MODIFIER | c.81+114T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590845 | |||||||
| chrX:49590848 | G | T | 2 | a0003c0003t0001g0088 a0003c0003t0001g0089 |
2 | HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.81+117G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590848 | |||||||
| chrX:49590936 | C | A | 2 | a0001c0005t0006g0018 a0001c0006t0001g0051 |
2 | HG00741.hp1 HG02723.hp2 |
intron_variant | MODIFIER | c.81+205C>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590936 | |||||||
| chrX:49590936 | C | T | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.81+205C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590936 | |||||||
| chrX:49590981 | A | G | 21 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(18): Show |
46 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(43): Show |
intron_variant | MODIFIER | c.82-216A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590981 | |||||||
| chrX:49590995 | T | C | 43 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(40): Show |
56 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(53): Show |
intron_variant | MODIFIER | c.82-202T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49590995 | |||||||
| chrX:49590998 | AAAGTCCT others(42): Show |
A | 1 | a0001c0004t0001g0052 | 1 | NA18964.hp2 | intron_variant | MODIFIER | c.82-196_82-148delGT others(47): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49590998 | ||||||
| chrX:49591026 | G | T | 4 | a0003c0003t0001g0021 a0003c0003t0001g0023 a0003c0003t0001g0024 others(1): Show |
4 | HG01975.hp1 NA18747.hp2 NA18987.hp1 others(1): Show |
intron_variant | MODIFIER | c.82-171G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49591026 | |||||||
| chrX:49591029 | T | A | 69 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(66): Show |
107 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(104): Show |
intron_variant | MODIFIER | c.82-168T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49591029 | |||||||
| chrX:49591101 | G | T | 1 | a0001c0005t0001g0074 | 1 | HG01256.hp1 | intron_variant | MODIFIER | c.82-96G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49591101 | |||||||
| chrX:49591104 | C | A | 1 | a0001c0005t0001g0074 | 1 | HG01256.hp1 | intron_variant | MODIFIER | c.82-93C>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49591104 | |||||||
| chrX:49591168 | T | C | 2 | a0001c0005t0001g0069 a0001c0008t0001g0068 |
2 | HG02165.hp1 NA20300.hp1 |
intron_variant | MODIFIER | c.82-29T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 2/4 | chrX | 49591168 | |||||||
| chrX:49591369 | CGT | C | 59 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(56): Show |
97 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(94): Show |
intron_variant | MODIFIER | c.202+66_202+67delTG | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591369 | ||||||
| chrX:49591385 | C | T | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.202+68C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591385 | |||||||
| chrX:49591386 | A | G | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.202+69A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591386 | |||||||
| chrX:49591387 | C | CGT | 1 | a0002c0001t0001g0014 | 2 | HG02293.hp1 NA19057.hp2 |
intron_variant | MODIFIER | c.202+87_202+88dupGT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591387 | ||||||
| chrX:49591387 | C | CGTGT | 4 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 others(1): Show |
4 | HG01515.hp1 HG03490.hp1 HG04115.hp1 others(1): Show |
intron_variant | MODIFIER | c.202+85_202+88dupGT others(2): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591387 | ||||||
| chrX:49591387 | C | T | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.202+70C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591387 | |||||||
| chrX:49591387 | CGT | C | 4 | a0001c0005t0001g0066 a0001c0005t0001g0067 a0001c0005t0001g0078 others(1): Show |
4 | HG02615.hp2 NA18942.hp2 NA18972.hp1 others(1): Show |
intron_variant | MODIFIER | c.202+87_202+88delGT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591387 | ||||||
| chrX:49591387 | CGTGTGT | C | 60 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(57): Show |
98 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(95): Show |
intron_variant | MODIFIER | c.202+83_202+88delGT others(4): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591387 | ||||||
| chrX:49591469 | G | C | 73 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(70): Show |
112 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(109): Show |
intron_variant | MODIFIER | c.202+152G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591469 | |||||||
| chrX:49591496 | T | C | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.202+179T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591496 | |||||||
| chrX:49591521 | C | G | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.202+204C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591521 | |||||||
| chrX:49591523 | C | G | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.202+206C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591523 | |||||||
| chrX:49591528 | A | G | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.202+211A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591528 | |||||||
| chrX:49591535 | T | A | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.202+218T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591535 | |||||||
| chrX:49591572 | G | A | 40 | a0001c0004t0001g0007 a0001c0004t0001g0053 a0001c0004t0004g0004 others(37): Show |
69 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(66): Show |
intron_variant | MODIFIER | c.202+255G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591572 | |||||||
| chrX:49591627 | C | T | 61 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(58): Show |
99 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(96): Show |
intron_variant | MODIFIER | c.202+310C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591627 | |||||||
| chrX:49591652 | A | G | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.202+335A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591652 | |||||||
| chrX:49591661 | T | G | 62 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(59): Show |
100 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(97): Show |
intron_variant | MODIFIER | c.202+344T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591661 | |||||||
| chrX:49591667 | A | C | 4 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0005g0080 others(1): Show |
4 | HG01515.hp1 HG04115.hp1 HG04228.hp1 others(1): Show |
intron_variant | MODIFIER | c.202+350A>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591667 | |||||||
| chrX:49591681 | C | G | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.202+364C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591681 | |||||||
| chrX:49591699 | CA | C | 2 | a0001c0002t0001g0045 a0001c0002t0001g0077 |
2 | HG01167.hp1 NA19074.hp2 |
intron_variant | MODIFIER | c.202+386delA | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591699 | ||||||
| chrX:49591705 | G | A | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.202+388G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591705 | |||||||
| chrX:49591706 | CT | C | 6 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(3): Show |
6 | HG01515.hp1 HG02622.hp1 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.202+392delT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591706 | ||||||
| chrX:49591724 | T | TAGTACTG others(23): Show |
86 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(83): Show |
126 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(123): Show |
intron_variant | MODIFIER | c.202+409_202+410ins others(30): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49591724 | ||||||
| chrX:49591755 | G | A | 1 | a0001c0006t0001g0051 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.202+438G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591755 | |||||||
| chrX:49591783 | T | C | 1 | a0002c0001t0001g0015 | 1 | HG00639.hp1 | intron_variant | MODIFIER | c.202+466T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591783 | |||||||
| chrX:49591866 | C | T | 3 | a0001c0005t0001g0074 a0003c0003t0001g0024 a0003c0003t0001g0025 |
3 | HG01256.hp1 HG01975.hp1 NA19080.hp1 |
intron_variant | MODIFIER | c.202+549C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591866 | |||||||
| chrX:49591930 | A | G | 1 | a0003c0003t0003g0012 | 2 | NA18940.hp1 NA18948.hp1 |
intron_variant | MODIFIER | c.202+613A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591930 | |||||||
| chrX:49591937 | C | T | 1 | a0001c0002t0001g0045 | 1 | NA19074.hp2 | intron_variant | MODIFIER | c.202+620C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591937 | |||||||
| chrX:49591960 | C | G | 58 | a0001c0002t0001g0070 a0001c0004t0001g0007 a0001c0004t0001g0053 others(55): Show |
89 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(86): Show |
intron_variant | MODIFIER | c.202+643C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49591960 | |||||||
| chrX:49592100 | G | A | 4 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 others(1): Show |
4 | HG03490.hp1 HG04115.hp1 HG04228.hp1 others(1): Show |
intron_variant | MODIFIER | c.202+783G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592100 | |||||||
| chrX:49592174 | G | C | 1 | a0002c0001t0001g0019 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.202+857G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592174 | |||||||
| chrX:49592246 | A | G | 13 | a0001c0009t0001g0047 a0002c0001t0001g0010 a0002c0001t0001g0015 others(10): Show |
20 | HG00423.hp1 HG00438.hp1 HG00639.hp1 others(17): Show |
intron_variant | MODIFIER | c.202+929A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592246 | |||||||
| chrX:49592267 | C | G | 1 | a0002c0001t0002g0037 | 1 | NA19003.hp2 | intron_variant | MODIFIER | c.202+950C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592267 | |||||||
| chrX:49592274 | A | AT | 14 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 others(11): Show |
15 | HG01975.hp1 HG02293.hp1 HG02486.hp1 others(12): Show |
intron_variant | MODIFIER | c.202+960dupT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49592274 | ||||||
| chrX:49592328 | G | A | 11 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0083 others(8): Show |
12 | HG01975.hp1 HG02293.hp1 HG02486.hp1 others(9): Show |
intron_variant | MODIFIER | c.202+1011G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592328 | |||||||
| chrX:49592382 | G | A | 1 | a0002c0001t0001g0014 | 2 | HG02293.hp1 NA19057.hp2 |
intron_variant | MODIFIER | c.202+1065G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592382 | |||||||
| chrX:49592407 | C | A | 2 | a0003c0003t0001g0088 a0003c0003t0001g0089 |
2 | HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.202+1090C>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592407 | |||||||
| chrX:49592467 | G | T | 5 | a0002c0001t0001g0019 a0002c0001t0001g0083 a0002c0001t0001g0085 others(2): Show |
5 | HG02622.hp1 HG03490.hp1 HG04115.hp1 others(2): Show |
intron_variant | MODIFIER | c.202+1150G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592467 | |||||||
| chrX:49592586 | T | C | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.202+1269T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592586 | |||||||
| chrX:49592606 | A | G | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.202+1289A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592606 | |||||||
| chrX:49592616 | TAAAC | T | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.202+1301_202+1304d others(6): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49592616 | ||||||
| chrX:49592621 | A | C | 1 | a0002c0001t0005g0080 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.202+1304A>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592621 | |||||||
| chrX:49592658 | G | A | 2 | a0002c0001t0001g0008 a0002c0001t0001g0026 |
3 | HG01175.hp1 HG01361.hp1 HG02300.hp1 |
intron_variant | MODIFIER | c.202+1341G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592658 | |||||||
| chrX:49592783 | T | G | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-1335T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592783 | |||||||
| chrX:49592810 | C | T | 1 | a0001c0005t0001g0073 | 1 | HG03540.hp2 | intron_variant | MODIFIER | c.203-1308C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592810 | |||||||
| chrX:49592831 | A | G | 2 | a0001c0002t0001g0063 a0001c0002t0001g0064 |
2 | HG02080.hp2 NA18987.hp2 |
intron_variant | MODIFIER | c.203-1287A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592831 | |||||||
| chrX:49592851 | A | C | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-1267A>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592851 | |||||||
| chrX:49592869 | A | T | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-1249A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592869 | |||||||
| chrX:49592874 | A | G | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-1244A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592874 | |||||||
| chrX:49592879 | C | T | 13 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0083 others(10): Show |
14 | HG01975.hp1 HG02293.hp1 HG02486.hp1 others(11): Show |
intron_variant | MODIFIER | c.203-1239C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49592879 | |||||||
| chrX:49593008 | T | TCACA | 2 | a0001c0004t0001g0007 a0002c0001t0005g0080 |
3 | HG02055.hp1 HG03453.hp1 HG04228.hp1 |
intron_variant | MODIFIER | c.203-1089_203-1086d others(6): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49593008 | ||||||
| chrX:49593008 | TCA | T | 20 | a0001c0002t0001g0062 a0001c0005t0001g0066 a0001c0005t0001g0078 others(17): Show |
22 | HG01069.hp1 HG01975.hp1 HG02109.hp1 others(19): Show |
intron_variant | MODIFIER | c.203-1087_203-1086d others(4): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49593008 | ||||||
| chrX:49593022 | A | T | 19 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0009 others(16): Show |
43 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(40): Show |
intron_variant | MODIFIER | c.203-1096A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593022 | |||||||
| chrX:49593061 | G | C | 26 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 others(23): Show |
51 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(48): Show |
intron_variant | MODIFIER | c.203-1057G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593061 | |||||||
| chrX:49593070 | C | T | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-1048C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593070 | |||||||
| chrX:49593087 | G | T | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-1031G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593087 | |||||||
| chrX:49593097 | C | T | 1 | a0002c0001t0001g0031 | 1 | HG03688.hp2 | intron_variant | MODIFIER | c.203-1021C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593097 | |||||||
| chrX:49593124 | A | T | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-994A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593124 | |||||||
| chrX:49593175 | A | T | 21 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0083 others(18): Show |
23 | HG01975.hp1 HG02109.hp1 HG02148.hp2 others(20): Show |
intron_variant | MODIFIER | c.203-943A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593175 | |||||||
| chrX:49593177 | A | C | 3 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 |
3 | NA18942.hp2 NA18972.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.203-941A>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593177 | |||||||
| chrX:49593177 | A | G | 21 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0083 others(18): Show |
23 | HG01975.hp1 HG02109.hp1 HG02148.hp2 others(20): Show |
intron_variant | MODIFIER | c.203-941A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593177 | |||||||
| chrX:49593270 | CT | C | 10 | a0001c0008t0001g0068 a0001c0009t0001g0047 a0002c0001t0001g0001 others(7): Show |
28 | HG00099.hp1 HG00140.hp1 HG01346.hp1 others(25): Show |
intron_variant | MODIFIER | c.203-838delT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49593270 | ||||||
| chrX:49593317 | G | T | 21 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0083 others(18): Show |
23 | HG01975.hp1 HG02109.hp1 HG02148.hp2 others(20): Show |
intron_variant | MODIFIER | c.203-801G>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593317 | |||||||
| chrX:49593353 | T | C | 4 | a0001c0005t0001g0066 a0001c0005t0001g0078 a0001c0005t0001g0087 others(1): Show |
4 | HG02622.hp1 NA18942.hp2 NA18972.hp1 others(1): Show |
intron_variant | MODIFIER | c.203-765T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593353 | |||||||
| chrX:49593531 | G | C | 1 | a0003c0003t0003g0039 | 1 | HG02109.hp1 | intron_variant | MODIFIER | c.203-587G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593531 | |||||||
| chrX:49593538 | T | C | 1 | a0002c0001t0001g0026 | 1 | HG02300.hp1 | intron_variant | MODIFIER | c.203-580T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593538 | |||||||
| chrX:49593551 | G | A | 3 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 |
3 | HG03490.hp1 HG04115.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.203-567G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593551 | |||||||
| chrX:49593637 | T | C | 10 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0009 others(7): Show |
28 | HG00099.hp1 HG00140.hp1 HG01346.hp1 others(25): Show |
intron_variant | MODIFIER | c.203-481T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593637 | |||||||
| chrX:49593797 | G | A | 11 | a0002c0001t0001g0014 a0003c0003t0001g0021 a0003c0003t0001g0088 others(8): Show |
13 | HG02109.hp1 HG02148.hp2 HG02293.hp1 others(10): Show |
intron_variant | MODIFIER | c.203-321G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593797 | |||||||
| chrX:49593917 | A | G | 23 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(20): Show |
48 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(45): Show |
intron_variant | MODIFIER | c.203-201A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593917 | |||||||
| chrX:49593925 | T | A | 23 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(20): Show |
48 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(45): Show |
intron_variant | MODIFIER | c.203-193T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593925 | |||||||
| chrX:49593932 | G | C | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.203-186G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593932 | |||||||
| chrX:49593961 | T | A | 20 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0085 others(17): Show |
22 | HG01975.hp1 HG02109.hp1 HG02148.hp2 others(19): Show |
intron_variant | MODIFIER | c.203-157T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593961 | |||||||
| chrX:49593961 | T | C | 23 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(20): Show |
48 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(45): Show |
intron_variant | MODIFIER | c.203-157T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49593961 | |||||||
| chrX:49594006 | T | G | 6 | a0001c0002t0001g0055 a0001c0002t0001g0056 a0001c0002t0001g0057 others(3): Show |
6 | HG01256.hp1 HG01884.hp1 HG02559.hp1 others(3): Show |
intron_variant | MODIFIER | c.203-112T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49594006 | |||||||
| chrX:49594056 | T | C | 23 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(20): Show |
48 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(45): Show |
intron_variant | MODIFIER | c.203-62T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49594056 | |||||||
| chrX:49594063 | T | C | 20 | a0002c0001t0001g0014 a0002c0001t0001g0019 a0002c0001t0001g0085 others(17): Show |
22 | HG01975.hp1 HG02109.hp1 HG02148.hp2 others(19): Show |
intron_variant | MODIFIER | c.203-55T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49594063 | |||||||
| chrX:49594072 | C | T | 23 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(20): Show |
48 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(45): Show |
intron_variant | MODIFIER | c.203-46C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49594072 | |||||||
| chrX:49594073 | T | G | 4 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 others(1): Show |
4 | HG03490.hp1 HG04115.hp1 HG04228.hp1 others(1): Show |
intron_variant | MODIFIER | c.203-45T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 3/4 | chrX | 49594073 | |||||||
| chrX:49594251 | A | G | 1 | a0002c0001t0002g0036 | 1 | HG02080.hp1 | splice_region_variant&intron_variant | LOW | c.328+8A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594251 | |||||||
| chrX:49594305 | T | C | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+62T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594305 | |||||||
| chrX:49594307 | G | C | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+64G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594307 | |||||||
| chrX:49594369 | T | C | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+126T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594369 | |||||||
| chrX:49594457 | C | T | 1 | a0002c0001t0002g0035 | 1 | HG00423.hp1 | intron_variant | MODIFIER | c.328+214C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594457 | |||||||
| chrX:49594477 | A | G | 1 | a0002c0001t0002g0034 | 1 | NA18941.hp2 | intron_variant | MODIFIER | c.328+234A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594477 | |||||||
| chrX:49594478 | T | G | 1 | a0003c0003t0003g0042 | 1 | HG02148.hp2 | intron_variant | MODIFIER | c.328+235T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594478 | |||||||
| chrX:49594500 | G | C | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.328+257G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594500 | |||||||
| chrX:49594523 | G | A | 3 | a0002c0001t0001g0008 a0002c0001t0001g0015 a0002c0001t0001g0026 |
4 | HG00639.hp1 HG01175.hp1 HG01361.hp1 others(1): Show |
intron_variant | MODIFIER | c.328+280G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594523 | |||||||
| chrX:49594571 | G | A | 9 | a0002c0001t0001g0014 a0003c0003t0001g0021 a0003c0003t0003g0012 others(6): Show |
11 | HG02109.hp1 HG02148.hp2 HG02293.hp1 others(8): Show |
intron_variant | MODIFIER | c.328+328G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594571 | |||||||
| chrX:49594592 | C | T | 7 | a0003c0003t0001g0021 a0003c0003t0003g0012 a0003c0003t0003g0039 others(4): Show |
8 | HG02109.hp1 HG02148.hp2 NA18940.hp1 others(5): Show |
intron_variant | MODIFIER | c.328+349C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594592 | |||||||
| chrX:49594603 | C | G | 1 | a0001c0002t0001g0062 | 1 | HG01069.hp1 | intron_variant | MODIFIER | c.328+360C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594603 | |||||||
| chrX:49594624 | G | A | 27 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(24): Show |
52 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(49): Show |
intron_variant | MODIFIER | c.328+381G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594624 | |||||||
| chrX:49594643 | C | G | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+400C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594643 | |||||||
| chrX:49594646 | T | C | 22 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(19): Show |
47 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(44): Show |
intron_variant | MODIFIER | c.328+403T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594646 | |||||||
| chrX:49594681 | A | C | 2 | a0002c0001t0001g0027 a0002c0001t0005g0080 |
2 | HG01433.hp1 HG04228.hp1 |
intron_variant | MODIFIER | c.328+438A>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594681 | |||||||
| chrX:49594706 | A | G | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+463A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594706 | |||||||
| chrX:49594722 | G | A | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+479G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594722 | |||||||
| chrX:49594735 | C | G | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+492C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594735 | |||||||
| chrX:49594768 | A | T | 2 | a0002c0001t0001g0008 a0002c0001t0001g0026 |
3 | HG01175.hp1 HG01361.hp1 HG02300.hp1 |
intron_variant | MODIFIER | c.328+525A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594768 | |||||||
| chrX:49594771 | G | A | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+528G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594771 | |||||||
| chrX:49594786 | A | G | 3 | a0002c0001t0001g0008 a0002c0001t0001g0015 a0002c0001t0001g0026 |
4 | HG00639.hp1 HG01175.hp1 HG01361.hp1 others(1): Show |
intron_variant | MODIFIER | c.328+543A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594786 | |||||||
| chrX:49594861 | A | T | 3 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 |
3 | HG03490.hp1 HG04115.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.328+618A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594861 | |||||||
| chrX:49594892 | C | T | 22 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0009 others(19): Show |
46 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(43): Show |
intron_variant | MODIFIER | c.328+649C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594892 | |||||||
| chrX:49594925 | A | T | 11 | a0002c0001t0001g0014 a0003c0003t0001g0021 a0003c0003t0001g0088 others(8): Show |
13 | HG02109.hp1 HG02148.hp2 HG02293.hp1 others(10): Show |
intron_variant | MODIFIER | c.328+682A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594925 | |||||||
| chrX:49594998 | T | C | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+755T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49594998 | |||||||
| chrX:49595145 | G | C | 1 | a0003c0003t0001g0089 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.328+902G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595145 | |||||||
| chrX:49595172 | G | C | 2 | a0003c0003t0003g0011 a0003c0003t0003g0040 |
3 | HG02257.hp1 HG02809.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.328+929G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595172 | |||||||
| chrX:49595216 | A | T | 1 | a0002c0001t0002g0033 | 1 | NA18980.hp1 | intron_variant | MODIFIER | c.328+973A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595216 | |||||||
| chrX:49595218 | G | A | 3 | a0002c0001t0001g0019 a0002c0001t0001g0085 a0002c0001t0002g0084 |
3 | HG03490.hp1 HG04115.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.328+975G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595218 | |||||||
| chrX:49595223 | G | A | 24 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(21): Show |
49 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show |
intron_variant | MODIFIER | c.328+980G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595223 | |||||||
| chrX:49595245 | A | ATTCTCCC others(5): Show |
1 | a0001c0004t0001g0052 | 1 | NA18964.hp2 | intron_variant | MODIFIER | c.328+1005_328+1016d others(14): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595245 | ||||||
| chrX:49595278 | C | G | 1 | a0003c0003t0001g0023 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.328+1035C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595278 | |||||||
| chrX:49595511 | CT | C | 9 | a0002c0001t0001g0014 a0003c0003t0001g0021 a0003c0003t0001g0088 others(6): Show |
11 | HG02109.hp1 HG02293.hp1 HG02886.hp1 others(8): Show |
intron_variant | MODIFIER | c.329-1191delT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595511 | ||||||
| chrX:49595517 | T | TTTC | 4 | a0001c0004t0001g0072 a0001c0005t0001g0087 a0003c0003t0003g0042 others(1): Show |
4 | HG02148.hp2 HG02622.hp2 NA18967.hp1 others(1): Show |
intron_variant | MODIFIER | c.329-1192_329-1191i others(5): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595517 | ||||||
| chrX:49595520 | T | C | 26 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(23): Show |
51 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(48): Show |
intron_variant | MODIFIER | c.329-1191T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595520 | |||||||
| chrX:49595521 | C | T | 4 | a0001c0004t0001g0072 a0001c0005t0001g0087 a0003c0003t0003g0042 others(1): Show |
4 | HG02148.hp2 HG02622.hp2 NA18967.hp1 others(1): Show |
intron_variant | MODIFIER | c.329-1190C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595521 | |||||||
| chrX:49595522 | T | A | 3 | a0001c0005t0001g0087 a0003c0003t0003g0042 a0003c0003t0003g0086 |
3 | HG02148.hp2 NA18967.hp1 NA19062.hp1 |
intron_variant | MODIFIER | c.329-1189T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595522 | |||||||
| chrX:49595522 | T | TTTTA | 20 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(17): Show |
29 | HG00099.hp2 HG00423.hp2 HG00438.hp2 others(26): Show |
intron_variant | MODIFIER | c.329-1155_329-1152d others(6): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595522 | ||||||
| chrX:49595522 | T | TTTTATTT others(1): Show |
10 | a0001c0002t0001g0045 a0001c0002t0001g0048 a0001c0002t0001g0060 others(7): Show |
10 | HG00639.hp2 HG01975.hp2 HG02004.hp1 others(7): Show |
intron_variant | MODIFIER | c.329-1159_329-1152d others(10): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595522 | ||||||
| chrX:49595522 | TTTTA | T | 9 | a0001c0004t0001g0054 a0001c0004t0004g0004 a0001c0005t0001g0073 others(6): Show |
12 | HG00741.hp1 HG01884.hp2 HG01975.hp1 others(9): Show |
intron_variant | MODIFIER | c.329-1155_329-1152d others(6): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595522 | ||||||
| chrX:49595522 | TTTTATTT others(9): Show |
T | 2 | a0003c0003t0001g0088 a0003c0003t0001g0089 |
2 | HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.329-1167_329-1152d others(18): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595522 | ||||||
| chrX:49595533 | TATTTATT others(20): Show |
T | 26 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(23): Show |
51 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(48): Show |
intron_variant | MODIFIER | c.329-1174_329-1148d others(29): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595533 | ||||||
| chrX:49595546 | AT | A | 2 | a0003c0003t0003g0011 a0003c0003t0003g0040 |
3 | HG02257.hp1 HG02809.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.329-1162delT | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49595546 | ||||||
| chrX:49595556 | TTATC | T | 2 | a0002c0001t0001g0019 a0002c0001t0001g0085 |
2 | HG04115.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.329-1154_329-1151d others(6): Show |
GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595556 | |||||||
| chrX:49595592 | C | T | 1 | a0002c0001t0001g0083 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.329-1119C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595592 | |||||||
| chrX:49595614 | T | C | 26 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(23): Show |
51 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(48): Show |
intron_variant | MODIFIER | c.329-1097T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595614 | |||||||
| chrX:49595637 | C | T | 2 | a0002c0001t0001g0019 a0002c0001t0001g0085 |
2 | HG04115.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.329-1074C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595637 | |||||||
| chrX:49595654 | T | C | 87 | a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0013 others(84): Show |
128 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(125): Show |
intron_variant | MODIFIER | c.329-1057T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595654 | |||||||
| chrX:49595691 | C | T | 14 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(11): Show |
33 | HG00099.hp1 HG00140.hp1 HG00639.hp1 others(30): Show |
intron_variant | MODIFIER | c.329-1020C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595691 | |||||||
| chrX:49595722 | C | T | 1 | a0001c0004t0001g0053 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.329-989C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595722 | |||||||
| chrX:49595773 | C | T | 1 | a0001c0002t0001g0045 | 1 | NA19074.hp2 | intron_variant | MODIFIER | c.329-938C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595773 | |||||||
| chrX:49595818 | A | G | 29 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(26): Show |
54 | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(51): Show |
intron_variant | MODIFIER | c.329-893A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595818 | |||||||
| chrX:49595922 | C | G | 3 | a0002c0001t0001g0009 a0002c0001t0001g0019 a0002c0001t0005g0080 |
4 | HG04228.hp1 NA18995.hp1 NA19074.hp1 others(1): Show |
intron_variant | MODIFIER | c.329-789C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595922 | |||||||
| chrX:49595922 | C | T | 1 | a0003c0003t0001g0023 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.329-789C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49595922 | |||||||
| chrX:49596018 | T | C | 1 | a0002c0001t0002g0032 | 1 | HG02683.hp1 | intron_variant | MODIFIER | c.329-693T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596018 | |||||||
| chrX:49596107 | T | A | 10 | a0001c0002t0001g0006 a0001c0002t0001g0055 a0001c0002t0001g0056 others(7): Show |
12 | HG01167.hp1 HG01256.hp1 HG01975.hp1 others(9): Show |
intron_variant | MODIFIER | c.329-604T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596107 | |||||||
| chrX:49596171 | G | C | 2 | a0001c0002t0001g0060 a0003c0003t0001g0023 |
2 | HG01975.hp2 NA18747.hp2 |
intron_variant | MODIFIER | c.329-540G>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596171 | |||||||
| chrX:49596288 | T | G | 1 | a0003c0003t0001g0023 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.329-423T>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596288 | |||||||
| chrX:49596297 | A | G | 11 | a0002c0001t0002g0003 a0002c0001t0002g0005 a0002c0001t0002g0032 others(8): Show |
17 | HG00423.hp1 HG00438.hp1 HG01123.hp1 others(14): Show |
intron_variant | MODIFIER | c.329-414A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596297 | |||||||
| chrX:49596302 | C | T | 11 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(8): Show |
30 | HG00099.hp1 HG00140.hp1 HG01175.hp1 others(27): Show |
intron_variant | MODIFIER | c.329-409C>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596302 | |||||||
| chrX:49596332 | T | C | 6 | a0001c0004t0001g0054 a0001c0004t0001g0072 a0001c0004t0004g0004 others(3): Show |
9 | HG00741.hp1 HG01884.hp2 HG02486.hp1 others(6): Show |
intron_variant | MODIFIER | c.329-379T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596332 | |||||||
| chrX:49596339 | T | C | 1 | a0001c0002t0001g0057 | 1 | HG02683.hp2 | intron_variant | MODIFIER | c.329-372T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596339 | |||||||
| chrX:49596348 | C | G | 3 | a0002c0001t0002g0005 a0002c0001t0002g0034 a0003c0003t0001g0023 |
5 | NA18747.hp2 NA18941.hp2 NA18942.hp1 others(2): Show |
intron_variant | MODIFIER | c.329-363C>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596348 | |||||||
| chrX:49596367 | A | G | 10 | a0002c0001t0002g0003 a0002c0001t0002g0005 a0002c0001t0002g0032 others(7): Show |
16 | HG00423.hp1 HG00438.hp1 HG01123.hp1 others(13): Show |
intron_variant | MODIFIER | c.329-344A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596367 | |||||||
| chrX:49596376 | G | A | 1 | a0003c0003t0001g0023 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.329-335G>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596376 | |||||||
| chrX:49596434 | A | G | 3 | a0001c0002t0001g0013 a0001c0002t0001g0060 a0001c0002t0001g0062 |
4 | HG01069.hp1 HG01975.hp2 HG02004.hp2 others(1): Show |
intron_variant | MODIFIER | c.329-277A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596434 | |||||||
| chrX:49596508 | A | G | 1 | a0003c0003t0001g0023 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.329-203A>G | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596508 | |||||||
| chrX:49596549 | T | A | 4 | a0001c0002t0001g0013 a0001c0002t0001g0060 a0001c0002t0001g0062 others(1): Show |
5 | HG01069.hp1 HG01256.hp1 HG01975.hp2 others(2): Show |
intron_variant | MODIFIER | c.329-162T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596549 | |||||||
| chrX:49596585 | A | T | 4 | a0001c0002t0001g0013 a0001c0002t0001g0060 a0001c0002t0001g0062 others(1): Show |
5 | HG01069.hp1 HG01256.hp1 HG01975.hp2 others(2): Show |
intron_variant | MODIFIER | c.329-126A>T | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596585 | |||||||
| chrX:49596590 | T | C | 15 | a0001c0009t0001g0047 a0002c0001t0001g0001 a0002c0001t0001g0008 others(12): Show |
34 | HG00099.hp1 HG00140.hp1 HG00639.hp1 others(31): Show |
intron_variant | MODIFIER | c.329-121T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596590 | |||||||
| chrX:49596611 | T | C | 2 | a0003c0003t0001g0017 a0003c0003t0001g0022 |
2 | HG02486.hp1 NA18972.hp2 |
intron_variant | MODIFIER | c.329-100T>C | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596611 | |||||||
| chrX:49596628 | T | A | 1 | a0001c0008t0001g0068 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.329-83T>A | GAGE2A | ENSG00000189064.9 | transcript | ENST00000362097.2 | protein_coding | 4/4 | chrX | 49596628 |