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geneid	170825
ensemblid	ENSG00000180613.11
hgncid	24959
symbol	GSX2
name	GS homeobox 2
refseq_nuc	NM_133267.3
refseq_prot	NP_573574.2
ensembl_nuc	ENST00000326902.7
ensembl_prot	ENSP00000319118.2
mane_status	MANE Select
chr	chr4
start	54100163
end	54102498
strand	+
ver	v1.2
region	chr4:54100163-54102498
region5000	chr4:54095163-54107498
regionname0	GSX2_chr4_54100163_54102498
regionname5000	GSX2_chr4_54095163_54107498

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	304	370	89	66	156	16	42	116	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0002	1/0	304	2	1	0	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	915	217	20	40	120	10	26	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
c0002	0/0	915	152	69	26	36	6	15	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
c0003	1/0	915	2	1	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
c0004	0/0	915	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	759	299	67	54	140	10	26	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
t0002	0/0	759	70	23	12	14	6	15	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
t0003	0/0	759	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
t0004	0/0	759	1	0	0	1	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
t0005	0/0	759	1	0	0	1	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	213	20	38	120	10	24	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0002	0/0	76	42	14	20	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0003	0/0	71	23	11	16	6	15	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0004	1/0	5	4	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0005	0/0	4	0	2	0	0	2	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0006	0/0	1	0	1	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0007	0/0	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
g0008	0/0	1	1	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	915	217	20	40	120	10	26	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0002	0/0	915	152	69	26	36	6	15	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0004	0/0	915	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0002c0003	1/0	915	2	1	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	1673	215	20	40	119	10	25	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0001t0003	0/0	1673	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0001t0005	0/0	1673	1	0	0	1	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0002t0001	0/0	1673	81	46	14	21	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0002t0002	0/0	1673	70	23	12	14	6	15	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0002t0004	0/0	1673	1	0	0	1	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0001c0004t0001	0/0	1673	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498
a0002c0003t0001	1/0	1673	2	1	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	copy fasta	chr4	54095163	54107498

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	210	20	38	119	10	22	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0001t0001g0005	0/0	4	0	2	0	0	2	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0001t0001g0007	0/0	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0001t0003g0001	0/0	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0001t0005g0001	0/0	1	0	0	1	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0001g0002	0/0	75	42	14	19	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0001g0003	0/0	2	0	0	2	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0001g0004	0/0	3	3	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0001g0008	0/0	1	1	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0002g0003	0/0	69	23	11	14	6	15	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0002g0006	0/0	1	0	1	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0002t0004g0002	0/0	1	0	0	1	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0001c0004t0001g0001	0/0	1	0	0	0	0	1	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
a0002c0003t0001g0004	1/0	2	1	0	0	0	0	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00140	hp2	a0001	c0002	t0002	g0003	EUR	GBR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00423	hp1	a0001	c0002	t0002	g0003	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00438	hp1	a0001	c0002	t0002	g0003	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00609	hp1	a0001	c0002	t0001	g0002	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00639	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00639	hp2	a0001	c0001	t0001	g0005	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00642	hp1	a0001	c0002	t0002	g0006	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00733	hp2	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01070	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01071	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01074	hp2	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01081	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01109	hp2	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01167	hp1	a0001	c0002	t0002	g0003	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01167	hp2	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01169	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01175	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01243	hp2	a0001	c0002	t0002	g0003	AMR	PUR	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01255	hp2	a0001	c0002	t0001	g0002	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01256	hp1	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01257	hp1	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01258	hp2	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01261	hp1	a0001	c0001	t0001	g0005	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01261	hp2	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01346	hp1	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01358	hp1	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01361	hp1	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01361	hp2	a0001	c0002	t0001	g0002	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01496	hp2	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01516	hp1	a0001	c0002	t0002	g0003	EUR	IBS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01517	hp1	a0001	c0002	t0002	g0003	EUR	IBS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01884	hp2	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01891	hp1	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02004	hp1	a0001	c0002	t0001	g0002	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02055	hp2	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02145	hp1	a0001	c0002	t0002	g0003	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02145	hp2	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02155	hp1	a0001	c0002	t0002	g0003	EAS	CDX	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02155	hp2	a0001	c0002	t0001	g0003	EAS	CDX	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02258	hp1	a0001	c0002	t0002	g0003	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02258	hp2	a0001	c0002	t0002	g0003	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02280	hp1	a0001	c0002	t0002	g0003	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02280	hp2	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02300	hp2	a0001	c0002	t0001	g0002	AMR	PEL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02451	hp1	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02451	hp2	a0001	c0002	t0002	g0003	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02523	hp1	a0001	c0002	t0002	g0003	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02572	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02572	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02615	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02615	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02622	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02622	hp2	a0001	c0002	t0002	g0003	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02630	hp1	a0001	c0002	t0002	g0003	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02647	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02683	hp1	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02717	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02723	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02723	hp2	a0001	c0002	t0002	g0003	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02735	hp1	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02735	hp2	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02809	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02818	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02818	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02895	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02895	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02896	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02896	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02922	hp1	a0001	c0002	t0002	g0003	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02922	hp2	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02965	hp2	a0001	c0002	t0002	g0003	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02970	hp1	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02970	hp2	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02976	hp1	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02976	hp2	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03017	hp2	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03098	hp1	a0001	c0002	t0001	g0004	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03098	hp2	a0001	c0002	t0002	g0003	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03139	hp1	a0001	c0002	t0002	g0003	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03139	hp2	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03195	hp1	a0001	c0002	t0001	g0002	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03195	hp2	a0001	c0002	t0002	g0003	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03209	hp1	a0001	c0002	t0001	g0002	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03209	hp2	a0001	c0002	t0001	g0002	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03225	hp2	a0001	c0002	t0001	g0004	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03453	hp2	a0001	c0002	t0002	g0003	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03486	hp2	a0001	c0002	t0001	g0002	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03491	hp1	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03491	hp2	a0001	c0001	t0001	g0005	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03492	hp1	a0001	c0001	t0001	g0005	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03516	hp1	a0001	c0002	t0002	g0003	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03540	hp1	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03540	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03579	hp1	a0001	c0002	t0001	g0002	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03579	hp2	a0001	c0002	t0002	g0003	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03654	hp2	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03669	hp2	a0001	c0002	t0002	g0003	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03688	hp2	a0001	c0002	t0002	g0003	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03704	hp1	a0001	c0004	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03831	hp1	a0001	c0001	t0001	g0007	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03831	hp2	a0001	c0002	t0002	g0003	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03927	hp1	a0001	c0002	t0002	g0003	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03942	hp2	a0001	c0002	t0002	g0003	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04115	hp1	a0001	c0002	t0002	g0003	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04199	hp1	a0001	c0002	t0002	g0003	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04204	hp2	a0001	c0002	t0002	g0003	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04228	hp1	a0001	c0002	t0002	g0003	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18522	hp1	a0001	c0002	t0002	g0003	AFR	YRI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18522	hp2	a0001	c0002	t0001	g0002	AFR	YRI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18612	hp1	a0001	c0002	t0002	g0003	EAS	CHB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18906	hp1	a0002	c0003	t0001	g0004	AFR	YRI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18906	hp2	a0001	c0002	t0001	g0002	AFR	YRI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18939	hp1	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18943	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18945	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18946	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18950	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18952	hp2	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18957	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18959	hp1	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18960	hp2	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18964	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18969	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18975	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18978	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18988	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18991	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18995	hp2	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19000	hp1	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19002	hp1	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19005	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19009	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19010	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19012	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19030	hp1	a0001	c0002	t0002	g0003	AFR	LWK	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19056	hp1	a0001	c0002	t0001	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19056	hp2	a0001	c0001	t0005	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19060	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19065	hp1	a0001	c0002	t0004	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19085	hp1	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19088	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19089	hp1	a0001	c0002	t0002	g0003	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19090	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19240	hp1	a0001	c0002	t0001	g0002	AFR	YRI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA19240	hp2	a0001	c0002	t0002	g0003	AFR	YRI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20129	hp1	a0001	c0002	t0001	g0002	AFR	ASW	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20129	hp2	a0001	c0002	t0002	g0003	AFR	ASW	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20752	hp2	a0001	c0002	t0002	g0003	EUR	TSI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20805	hp1	a0001	c0002	t0002	g0003	EUR	TSI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20805	hp2	a0001	c0002	t0002	g0003	EUR	TSI	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20905	hp1	a0001	c0001	t0003	g0001	SAS	GIH	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG01123	hp2	a0001	c0002	t0002	g0003	AMR	CLM	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02109	hp1	a0001	c0002	t0001	g0002	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02109	hp2	a0001	c0002	t0002	g0003	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02486	hp2	a0001	c0002	t0001	g0008	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG02559	hp2	a0001	c0002	t0001	g0004	AFR	ACB	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03471	hp1	a0001	c0002	t0002	g0003	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG03471	hp2	a0001	c0002	t0001	g0002	AFR	MSL	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG06807	hp1	a0001	c0002	t0002	g0003	AFR	USA	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA18955	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA20300	hp2	a0001	c0002	t0001	g0002	AFR	USA	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA21309	hp1	a0001	c0002	t0001	g0002	AFR	LWK	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
NA21309	hp2	a0001	c0002	t0001	g0002	AFR	LWK	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498
homoSapiens_grch38	hp1	a0002	c0003	t0001	g0004	REF	REF	GSX2_chr4_54095163_54107498	GSX2	chr4	54095163	54107498

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr4:54100663	G G	A A	1	a0001 a0001	370	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(367): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.319G>A c.319G>A	p.Gly107Ser p.Gly107Ser	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/2	501/1673	319/915	107/304			chr4	54100663

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr4:54100374	C C	T T	1	a0001c0004 a0001c0004	1	HG03704.hp1 HG03704.hp1	synonymous_variant	LOW	c.30C>T c.30C>T	p.Leu10Leu p.Leu10Leu	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/2	212/1673	30/915	10/304	chr4	54100374
chr4:54100500	C C	T T	2	a0001c0001 a0001c0004 a0001c0001 a0001c0004	218	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(215): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02896.hp2 HG02965.hp1 HG03017.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19056.hp2 NA19060.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.156C>T c.156C>T	p.Ser52Ser p.Ser52Ser	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/2	338/1673	156/915	52/304	chr4	54100500
chr4:54100752	T T	C C	2	a0001c0001 a0001c0004 a0001c0001 a0001c0004	218	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(215): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02896.hp2 HG02965.hp1 HG03017.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19056.hp2 NA19060.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.408T>C c.408T>C	p.His136His p.His136His	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/2	590/1673	408/915	136/304	chr4	54100752

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr4:54102007	C C	G G	1	a0001c0001t0005 a0001c0001t0005	1	NA19056.hp2 NA19056.hp2	3_prime_UTR_variant	MODIFIER	c.85C>G c.85C>G	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	2/2	85	chr4	54102007
chr4:54102200	G G	A A	1	a0001c0002t0002 a0001c0002t0002	70	HG00140.hp2 HG00423.hp1 HG00438.hp1 others(67): Show HG00140.hp2 HG00423.hp1 HG00438.hp1 HG00642.hp1 HG01123.hp2 HG01167.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01517.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02523.hp1 HG02622.hp2 HG02630.hp1 HG02683.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02922.hp1 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03471.hp1 HG03491.hp1 HG03516.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18952.hp2 NA18959.hp1 NA18960.hp2 NA18995.hp2 NA19000.hp1 NA19002.hp1 NA19030.hp1 NA19085.hp1 NA19089.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.278G>A c.278G>A	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	2/2	278	chr4	54102200
chr4:54102247	G G	T T	1	a0001c0002t0004 a0001c0002t0004	1	NA19065.hp1 NA19065.hp1	3_prime_UTR_variant	MODIFIER	c.325G>T c.325G>T	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	2/2	325	chr4	54102247
chr4:54102332	C C	T T	1	a0001c0001t0003 a0001c0001t0003	1	NA20905.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.410C>T c.410C>T	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	2/2	410	chr4	54102332

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr4:54101047	C C	T T	9	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0003g0001 a0001c0001t0005g0001 a0001c0002t0001g0002 a0001c0002t0001g0008 a0001c0002t0004g0002 a0001c0004t0001g0001	295	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(292): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.574+129C>T c.574+129C>T	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101047
chr4:54101187	A A	T T	1	a0001c0002t0001g0008 a0001c0002t0001g0008	1	HG02486.hp2 HG02486.hp2	intron_variant	MODIFIER	c.574+269A>T c.574+269A>T	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101187
chr4:54101191	C C	A A	6	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0003g0001 a0001c0001t0005g0001 a0001c0004t0001g0001	218	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(215): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02896.hp2 HG02965.hp1 HG03017.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19056.hp2 NA19060.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.574+273C>A c.574+273C>A	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101191
chr4:54101195	T T	G G	12	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0003g0001 a0001c0001t0005g0001 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0008 a0001c0002t0002g0003 a0001c0002t0002g0006 a0001c0002t0004g0002 a0001c0004t0001g0001	367	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(364): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.574+277T>G c.574+277T>G	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101195
chr4:54101256	C C	T T	1	a0001c0002t0002g0006 a0001c0002t0002g0006	1	HG00642.hp1 HG00642.hp1	intron_variant	MODIFIER	c.575-326C>T c.575-326C>T	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101256
chr4:54101257	G G	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.575-325G>A c.575-325G>A	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101257
chr4:54101463	A A	T T	1	a0001c0001t0001g0005 a0001c0001t0001g0005	4	HG00639.hp2 HG01261.hp1 HG03491.hp2 others(1): Show HG00639.hp2 HG01261.hp1 HG03491.hp2 HG03492.hp1	intron_variant	MODIFIER	c.575-119A>T c.575-119A>T	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101463
chr4:54101542	C C	A A	6	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0003g0001 a0001c0001t0005g0001 a0001c0004t0001g0001	218	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(215): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02896.hp2 HG02965.hp1 HG03017.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19056.hp2 NA19060.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.575-40C>A c.575-40C>A	GSX2	ENSG00000180613.11	transcript	ENST00000326902.7	protein_coding	1/1	chr4	54101542

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🧬 JoGo Online Haplotype Explorer GSX2_chr4_54095163_54107498

JoGo Local Haplotype Explorer (on iGV) GSX2_chr4_54095163_54107498

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 2)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 8)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 8)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 14)

Haplotype Details by Sample (Haploid Level) (Total: 372)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 1)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 8)

External Link

Annotation (Repeats)

Annotation (SNP Array)