| geneid | 649330 |
|---|---|
| ensemblid | ENSG00000277058.3 |
| hgncid | 51235 |
| symbol | HNRNPCL3 |
| name | heterogeneous nuclear ribonucleoprotein C like 3 |
| refseq_nuc | NM_001382358.1 |
| refseq_prot | NP_001369287.1 |
| ensembl_nuc | ENST00000617807.3 |
| ensembl_prot | ENSP00000478017.1 |
| mane_status | MANE Select |
| chr | chr1 |
| start | 13060769 |
| end | 13062878 |
| strand | + |
| ver | v1.2 |
| region | chr1:13060769-13062878 |
| region5000 | chr1:13055769-13067878 |
| regionname0 | HNRNPCL3_chr1_13060769_13062878 |
| regionname5000 | HNRNPCL3_chr1_13055769_13067878 |
| ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 293 | 113 | 2 | 31 | 68 | 8 | 4 | 46 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0002 | 0/0 | 293 | 3 | 0 | 1 | 0 | 2 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 0/0 | 882 | 111 | 2 | 31 | 67 | 7 | 4 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| c0002 | 0/0 | 882 | 3 | 0 | 1 | 0 | 2 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| c0003 | 0/0 | 882 | 2 | 0 | 0 | 1 | 1 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 0/0 | 1016 | 108 | 2 | 29 | 65 | 8 | 4 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| t0002 | 0/0 | 1016 | 5 | 0 | 1 | 2 | 2 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| t0003 | 0/0 | 1016 | 1 | 0 | 1 | 0 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| t0004 | 0/0 | 1016 | 1 | 0 | 1 | 0 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| t0005 | 0/0 | 1016 | 1 | 0 | 0 | 1 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 116 | 2 | 32 | 68 | 10 | 4 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 882 | 111 | 2 | 31 | 67 | 7 | 4 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0001c0003 | 0/0 | 882 | 2 | 0 | 0 | 1 | 1 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0002c0002 | 0/0 | 882 | 3 | 0 | 1 | 0 | 2 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 1897 | 106 | 2 | 29 | 64 | 7 | 4 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0001c0001t0002 | 0/0 | 1897 | 2 | 0 | 0 | 2 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0001c0001t0003 | 0/0 | 1897 | 1 | 0 | 1 | 0 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0001c0001t0004 | 0/0 | 1897 | 1 | 0 | 1 | 0 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0001c0001t0005 | 0/0 | 1897 | 1 | 0 | 0 | 1 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0001c0003t0001 | 0/0 | 1897 | 2 | 0 | 0 | 1 | 1 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| a0002c0002t0002 | 0/0 | 1897 | 3 | 0 | 1 | 0 | 2 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | copy fasta | chr1 | 13055769 | 13067878 |
| actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 106 | 2 | 29 | 64 | 7 | 4 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| a0001c0001t0002g0001 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| a0001c0001t0003g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| a0001c0001t0004g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| a0001c0001t0005g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| a0001c0003t0001g0001 | 0/0 | 2 | 0 | 0 | 1 | 1 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| a0002c0002t0002g0001 | 0/0 | 3 | 0 | 1 | 0 | 2 | 0 | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00099 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00280 | hp1 | a0002 | c0002 | t0002 | g0001 | EUR | FIN | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00280 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00408 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00408 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00423 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00423 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00438 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00438 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00544 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00609 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00639 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00673 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | CHS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00733 | hp1 | a0001 | c0001 | t0003 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00733 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00735 | hp2 | a0002 | c0002 | t0002 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG00738 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01069 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01071 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01071 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01081 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01081 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01257 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01358 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01361 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01361 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01433 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01517 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01517 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01943 | hp1 | a0001 | c0001 | t0004 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01943 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02004 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02004 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02132 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02135 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02165 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02165 | hp2 | a0001 | c0001 | t0005 | g0001 | EAS | CDX | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02258 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02293 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG02738 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| HG03710 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18612 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18747 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18941 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18941 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18951 | hp1 | a0001 | c0003 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18951 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18952 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18954 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18954 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18964 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18964 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18970 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18972 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18972 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18974 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18976 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18976 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18979 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18979 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18983 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18984 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18989 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA18989 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19006 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19006 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19054 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19054 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19058 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19068 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19074 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19074 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19079 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19085 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19088 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19090 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA19090 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA20752 | hp2 | a0001 | c0003 | t0001 | g0001 | EUR | TSI | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| NA20805 | hp2 | a0002 | c0002 | t0002 | g0001 | EUR | TSI | HNRNPCL3_chr1_13055769_13067878 | HNRNPCL3 | chr1 | 13055769 | 13067878 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:13062154
|
C | T | 1 | a0002 | 3 | HG00280.hp1 HG00735.hp2 NA20805.hp2 |
missense_variant | MODERATE | c.830C>T | p.Ala277Val | HNRNPCL3 | ENSG00000277058.3 | transcript | ENST00000617807.3 | protein_coding | 2/2 | 1173/1897 | 830/882 | 277/293 | chr1 | 13062154 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:13061667
|
T | C | 1 | a0001c0003 | 2 | NA18951.hp1 NA20752.hp2 |
synonymous_variant | LOW | c.343T>C | p.Leu115Leu | HNRNPCL3 | ENSG00000277058.3 | transcript | ENST00000617807.3 | protein_coding | 2/2 | 686/1897 | 343/882 | 115/293 | chr1 | 13061667 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:13060785
|
A | G | 2 | a0001c0001t0002a0002c0002t0002 | 5 | HG00280.hp1 HG00673.hp2 HG00735.hp2 others(2): Show |
5_prime_UTR_variant | MODIFIER | c.-327A>G | HNRNPCL3 | ENSG00000277058.3 | transcript | ENST00000617807.3 | protein_coding | 1/2 | 540 | chr1 | 13060785 | |||||
| chr1:13061182
|
T | C | 1 | a0001c0001t0003 | 1 | HG00733.hp1 | 5_prime_UTR_variant | MODIFIER | c.-143T>C | HNRNPCL3 | ENSG00000277058.3 | transcript | ENST00000617807.3 | protein_coding | 2/2 | 143 | chr1 | 13061182 | |||||
| chr1:13061284
|
T | C | 1 | a0001c0001t0004 | 1 | HG01943.hp1 | 5_prime_UTR_variant | MODIFIER | c.-41T>C | HNRNPCL3 | ENSG00000277058.3 | transcript | ENST00000617807.3 | protein_coding | 2/2 | 41 | chr1 | 13061284 | |||||
| chr1:13062649
|
C | A | 1 | a0001c0001t0005 | 1 | HG02165.hp2 | 3_prime_UTR_variant | MODIFIER | c.*443C>A | HNRNPCL3 | ENSG00000277058.3 | transcript | ENST00000617807.3 | protein_coding | 2/2 | 443 | chr1 | 13062649 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|