Joint Open Genome and Omics Platform (JoGo)

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geneid	11077
ensemblid	ENSG00000160207.9
hgncid	5226
symbol	HSF2BP
name	heat shock transcription factor 2 binding protein
refseq_nuc	NM_007031.2
refseq_prot	NP_008962.1
ensembl_nuc	ENST00000291560.7
ensembl_prot	ENSP00000291560.2
mane_status	MANE Select
chr	chr21
start	43529186
end	43659488
strand	-
ver	v1.2
region	chr21:43529186-43659488
region5000	chr21:43524186-43664488
regionname0	HSF2BP_chr21_43529186_43659488
regionname5000	HSF2BP_chr21_43524186_43664488

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	334	2	0	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	copy fasta	chr21	43524186	43664488

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1005	2	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	copy fasta	chr21	43524186	43664488

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	896	2	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	copy fasta	chr21	43524186	43664488

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	1	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	chr21	43524186	43664488
g0002	0/1	1	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	chr21	43524186	43664488

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1005	2	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	copy fasta	chr21	43524186	43664488

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1900	2	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	copy fasta	chr21	43524186	43664488

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	1	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	chr21	43524186	43664488
a0001c0001t0001g0002	0/1	1	0	0	0	0	0	HSF2BP_chr21_43524186_43664488	HSF2BP	chr21	43524186	43664488

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	HSF2BP_chr21_43524186_43664488	HSF2BP	chr21	43524186	43664488
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	HSF2BP_chr21_43524186_43664488	HSF2BP	chr21	43524186	43664488

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr21:43532348	A A	T T	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.797-2386T>A c.797-2386T>A		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	8/8						chr21	43532348
chr21:43532351	A A	T T	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.797-2389T>A c.797-2389T>A		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	8/8						chr21	43532351
chr21:43581346	T T	A A	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.796+10879A>T c.796+10879A>T		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	8/8						chr21	43581346
chr21:43582028	C C	A A	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.796+10197G>T c.796+10197G>T		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	8/8						chr21	43582028
chr21:43582037	G G	T T	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.796+10188C>A c.796+10188C>A		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	8/8						chr21	43582037
chr21:43604221	G G	C C	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.692+9609C>G c.692+9609C>G		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	7/8						chr21	43604221
chr21:43604453	C C	A A	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.692+9377G>T c.692+9377G>T		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	7/8						chr21	43604453
chr21:43616052	A A	T T	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.575-2105T>A c.575-2105T>A		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	6/8						chr21	43616052
chr21:43650796	T T	C C	1	a0001c0001t0001g0002 a0001c0001t0001g0002	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.187+5791A>G c.187+5791A>G		HSF2BP	ENSG00000160207.9	transcript	ENST00000291560.7	protein_coding	3/8						chr21	43650796