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geneid	3931
ensemblid	ENSG00000213398.8
hgncid	6522
symbol	LCAT
name	lecithin-cholesterol acyltransferase
refseq_nuc	NM_000229.2
refseq_prot	NP_000220.1
ensembl_nuc	ENST00000264005.10
ensembl_prot	ENSP00000264005.5
mane_status	MANE Select
chr	chr16
start	67939750
end	67944120
strand	-
ver	v1.2
region	chr16:67939750-67944120
region5000	chr16:67934750-67949120
regionname0	LCAT_chr16_67939750_67944120
regionname5000	LCAT_chr16_67934750_67949120

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	440	296	90	58	102	6	38	80	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0002	0/0	440	3	3	0	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0003	0/0	440	3	1	2	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0004	0/0	440	1	0	0	1	0	0	1	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0005	0/0	440	1	0	0	1	0	0	1	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1323	277	78	53	101	5	38	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0002	0/0	1323	17	11	5	0	1	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0003	0/0	1323	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0004	0/0	1323	3	1	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0005	0/0	1323	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0006	0/0	1323	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0007	0/0	1323	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
c0008	0/0	1323	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	174	303	94	60	103	6	38	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
t0002	0/0	174	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	146	25	26	65	3	25	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0002	0/0	50	18	13	14	1	4	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0003	0/0	20	0	8	8	0	4	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0004	0/0	14	8	0	5	0	1	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0005	0/0	11	10	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0006	0/0	7	7	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0007	0/0	5	0	4	0	1	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0008	0/0	4	2	0	0	0	2	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0009	0/0	3	1	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0010	0/0	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0011	0/0	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0012	0/0	3	0	0	3	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0013	0/0	2	1	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0014	0/0	2	0	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0015	0/0	2	2	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0016	0/0	2	2	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0017	0/0	2	0	0	2	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0018	0/0	2	0	1	0	1	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0019	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0020	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0021	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0022	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0023	0/0	1	0	0	0	0	1	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0024	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0025	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0026	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0027	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0028	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0029	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0030	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0031	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0032	0/0	1	0	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0033	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0034	0/0	1	0	0	0	0	1	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0035	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0036	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0037	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0038	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0039	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0040	0/0	1	0	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
g0041	0/0	1	0	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1323	277	78	53	101	5	38	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0002	0/0	1323	17	11	5	0	1	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0006	0/0	1323	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0008	0/0	1323	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0002c0003	0/0	1323	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0003c0004	0/0	1323	3	1	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0004c0005	0/0	1323	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0005c0007	0/0	1323	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1496	276	78	53	100	5	38	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0001t0002	0/0	1496	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0002t0001	0/0	1496	17	11	5	0	1	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0006t0001	0/0	1496	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0001c0008t0001	0/0	1496	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0002c0003t0001	0/0	1496	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0003c0004t0001	0/0	1496	3	1	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0004c0005t0001	0/0	1496	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120
a0005c0007t0001	0/0	1496	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	copy fasta	chr16	67934750	67949120

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	146	25	26	65	3	25	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0002	0/0	50	18	13	14	1	4	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0003	0/0	20	0	8	8	0	4	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0004	0/0	14	8	0	5	0	1	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0005	0/0	11	10	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0008	0/0	4	2	0	0	0	2	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0011	0/0	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0012	0/0	3	0	0	3	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0014	0/0	2	0	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0017	0/0	2	0	0	2	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0018	0/0	2	0	1	0	1	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0020	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0021	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0022	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0023	0/0	1	0	0	0	0	1	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0024	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0025	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0027	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0032	0/0	1	0	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0033	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0034	0/0	1	0	0	0	0	1	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0039	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0040	0/0	1	0	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0001g0041	0/0	1	0	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0001t0002g0037	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0002t0001g0006	0/0	7	7	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0002t0001g0007	0/0	5	0	4	0	1	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0002t0001g0013	0/0	2	1	1	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0002t0001g0016	0/0	2	2	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0002t0001g0019	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0006t0001g0036	0/0	1	1	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0001c0008t0001g0030	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0002c0003t0001g0010	0/0	3	3	0	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0003c0004t0001g0009	0/0	3	1	2	0	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0004c0005t0001g0028	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
a0005c0007t0001g0026	0/0	1	0	0	1	0	0	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0018	EUR	GBR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00438	hp1	a0001	c0001	t0001	g0039	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00738	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00741	hp1	a0001	c0002	t0001	g0007	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG00741	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01069	hp1	a0001	c0001	t0001	g0014	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01070	hp2	a0001	c0002	t0001	g0007	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01071	hp1	a0001	c0001	t0001	g0014	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01071	hp2	a0001	c0002	t0001	g0007	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01081	hp2	a0001	c0001	t0001	g0018	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01099	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01106	hp2	a0001	c0001	t0001	g0041	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01109	hp1	a0001	c0001	t0001	g0032	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01109	hp2	a0001	c0001	t0001	g0003	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01167	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01169	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01175	hp1	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01192	hp1	a0001	c0001	t0001	g0003	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01192	hp2	a0001	c0001	t0001	g0002	AMR	PUR	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01255	hp2	a0001	c0001	t0001	g0002	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01256	hp2	a0001	c0001	t0001	g0002	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01257	hp1	a0001	c0001	t0001	g0003	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01346	hp1	a0001	c0002	t0001	g0007	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01346	hp2	a0001	c0001	t0001	g0040	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01433	hp1	a0003	c0004	t0001	g0009	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01433	hp2	a0001	c0002	t0001	g0013	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01884	hp1	a0001	c0001	t0001	g0004	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01884	hp2	a0001	c0001	t0001	g0015	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01891	hp1	a0001	c0001	t0001	g0004	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01891	hp2	a0001	c0001	t0001	g0004	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01934	hp1	a0003	c0004	t0001	g0009	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01952	hp1	a0001	c0001	t0001	g0003	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01952	hp2	a0001	c0001	t0001	g0003	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01993	hp1	a0001	c0001	t0001	g0003	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02004	hp1	a0001	c0001	t0001	g0003	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02015	hp1	a0001	c0001	t0001	g0003	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02027	hp1	a0001	c0001	t0001	g0002	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02055	hp1	a0001	c0001	t0001	g0002	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02055	hp2	a0001	c0001	t0001	g0002	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02071	hp2	a0001	c0001	t0002	g0037	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02132	hp1	a0001	c0001	t0001	g0002	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02135	hp2	a0001	c0001	t0001	g0003	EAS	KHV	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02145	hp2	a0001	c0001	t0001	g0002	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02257	hp1	a0003	c0004	t0001	g0009	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02257	hp2	a0001	c0001	t0001	g0004	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02300	hp2	a0001	c0001	t0001	g0003	AMR	PEL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02451	hp1	a0001	c0001	t0001	g0033	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02451	hp2	a0001	c0001	t0001	g0024	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02572	hp2	a0002	c0003	t0001	g0010	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02602	hp2	a0001	c0001	t0001	g0003	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02615	hp1	a0001	c0001	t0001	g0035	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02615	hp2	a0001	c0001	t0001	g0027	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02622	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02622	hp2	a0001	c0002	t0001	g0006	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02630	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02630	hp2	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02647	hp2	a0001	c0001	t0001	g0005	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02717	hp1	a0002	c0003	t0001	g0010	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02723	hp1	a0001	c0001	t0001	g0004	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02735	hp1	a0001	c0001	t0001	g0003	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02735	hp2	a0001	c0001	t0001	g0034	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02809	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02809	hp2	a0001	c0001	t0001	g0005	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02818	hp2	a0001	c0001	t0001	g0005	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02886	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02886	hp2	a0002	c0003	t0001	g0010	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02895	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02895	hp2	a0001	c0002	t0001	g0016	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02896	hp1	a0001	c0002	t0001	g0006	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02896	hp2	a0001	c0001	t0001	g0004	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02897	hp1	a0001	c0001	t0001	g0004	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02897	hp2	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02922	hp2	a0001	c0001	t0001	g0008	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02965	hp1	a0001	c0001	t0001	g0020	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02976	hp1	a0001	c0002	t0001	g0016	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03041	hp1	a0001	c0001	t0001	g0002	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03041	hp2	a0001	c0001	t0001	g0011	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03098	hp1	a0001	c0001	t0001	g0002	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03098	hp2	a0001	c0002	t0001	g0013	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03139	hp1	a0001	c0001	t0001	g0002	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03195	hp1	a0001	c0001	t0001	g0025	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03195	hp2	a0001	c0002	t0001	g0006	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03209	hp1	a0001	c0001	t0001	g0002	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03209	hp2	a0001	c0001	t0001	g0004	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03225	hp1	a0001	c0001	t0001	g0011	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03225	hp2	a0001	c0002	t0001	g0019	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03453	hp1	a0001	c0001	t0001	g0002	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03486	hp2	a0001	c0002	t0001	g0006	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03516	hp1	a0001	c0001	t0001	g0015	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03516	hp2	a0001	c0001	t0001	g0005	AFR	ESN	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03540	hp1	a0001	c0001	t0001	g0031	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03540	hp2	a0001	c0002	t0001	g0006	AFR	GWD	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03579	hp2	a0001	c0006	t0001	g0036	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03654	hp1	a0001	c0001	t0001	g0002	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03710	hp2	a0001	c0001	t0001	g0023	SAS	PJL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03927	hp2	a0001	c0001	t0001	g0004	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03942	hp1	a0001	c0001	t0001	g0003	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03942	hp2	a0001	c0001	t0001	g0003	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04115	hp2	a0001	c0001	t0001	g0008	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04199	hp1	a0001	c0001	t0001	g0002	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04204	hp1	a0001	c0001	t0001	g0008	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18522	hp1	a0001	c0001	t0001	g0005	AFR	YRI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18522	hp2	a0001	c0002	t0001	g0006	AFR	YRI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18906	hp2	a0001	c0001	t0001	g0005	AFR	YRI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18940	hp1	a0001	c0001	t0001	g0012	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18941	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18949	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18952	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18956	hp1	a0004	c0005	t0001	g0028	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18964	hp2	a0005	c0007	t0001	g0026	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18973	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18975	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18978	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18978	hp2	a0001	c0001	t0001	g0004	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18981	hp2	a0001	c0001	t0001	g0004	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18991	hp1	a0001	c0001	t0001	g0017	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18992	hp1	a0001	c0001	t0001	g0005	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18994	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18995	hp2	a0001	c0001	t0001	g0022	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19000	hp2	a0001	c0001	t0001	g0004	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19003	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19007	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19007	hp2	a0001	c0001	t0001	g0003	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19010	hp1	a0001	c0001	t0001	g0012	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19011	hp1	a0001	c0008	t0001	g0030	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19030	hp2	a0001	c0001	t0001	g0038	AFR	LWK	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19043	hp2	a0001	c0001	t0001	g0005	AFR	LWK	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19055	hp2	a0001	c0001	t0001	g0012	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19060	hp1	a0001	c0001	t0001	g0004	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19064	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19068	hp1	a0001	c0001	t0001	g0003	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19078	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19081	hp1	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19084	hp1	a0001	c0001	t0001	g0017	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19084	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19089	hp1	a0001	c0001	t0001	g0004	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19090	hp2	a0001	c0001	t0001	g0002	EAS	JPT	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19240	hp1	a0001	c0001	t0001	g0011	AFR	YRI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA19240	hp2	a0001	c0001	t0001	g0002	AFR	YRI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20129	hp2	a0001	c0001	t0001	g0005	AFR	ASW	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20752	hp2	a0001	c0002	t0001	g0007	EUR	TSI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02109	hp2	a0001	c0001	t0001	g0002	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02486	hp1	a0001	c0001	t0001	g0021	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02486	hp2	a0001	c0001	t0001	g0029	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG02559	hp2	a0001	c0001	t0001	g0008	AFR	ACB	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03471	hp1	a0001	c0001	t0001	g0005	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG06807	hp1	a0001	c0002	t0001	g0006	AFR	USA	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
HG06807	hp2	a0001	c0001	t0001	g0005	AFR	USA	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	LCAT_chr16_67934750_67949120	LCAT	chr16	67934750	67949120

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:67940173	C C	T T	1	a0004 a0004	1	NA18956.hp1 NA18956.hp1	missense_variant	MODERATE	c.1054G>A c.1054G>A	p.Asp352Asn p.Asp352Asn	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	6/6	1073/1496	1054/1323	352/440	chr16	67940173
chr16:67940302	G G	C C	1	a0005 a0005	1	NA18964.hp2 NA18964.hp2	missense_variant	MODERATE	c.925C>G c.925C>G	p.Leu309Val p.Leu309Val	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	6/6	944/1496	925/1323	309/440	chr16	67940302
chr16:67942417	A A	T T	1	a0003 a0003	3	HG01433.hp1 HG01934.hp1 HG02257.hp1 HG01433.hp1 HG01934.hp1 HG02257.hp1	missense_variant	MODERATE	c.694T>A c.694T>A	p.Ser232Thr p.Ser232Thr	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/6	713/1496	694/1323	232/440	chr16	67942417
chr16:67942948	C C	T T	1	a0002 a0002	3	HG02572.hp2 HG02717.hp1 HG02886.hp2 HG02572.hp2 HG02717.hp1 HG02886.hp2	missense_variant	MODERATE	c.340G>A c.340G>A	p.Val114Met p.Val114Met	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	3/6	359/1496	340/1323	114/440	chr16	67942948

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:67940050	G G	A A	2	a0001c0002 a0002c0003 a0001c0002 a0002c0003	20	HG00741.hp1 HG01070.hp2 HG01071.hp2 others(17): Show HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01346.hp1 HG01433.hp2 HG02572.hp2 HG02622.hp2 HG02717.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02976.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp2 HG03486.hp2 HG03540.hp2 HG06807.hp1 NA18522.hp2 NA20752.hp2	synonymous_variant	LOW	c.1177C>T c.1177C>T	p.Leu393Leu p.Leu393Leu	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	6/6	1196/1496	1177/1323	393/440	chr16	67940050
chr16:67940114	C C	T T	1	a0001c0006 a0001c0006	1	HG03579.hp2 HG03579.hp2	synonymous_variant	LOW	c.1113G>A c.1113G>A	p.Thr371Thr p.Thr371Thr	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	6/6	1132/1496	1113/1323	371/440	chr16	67940114
chr16:67943208	G G	A A	1	a0001c0008 a0001c0008	1	NA19011.hp1 NA19011.hp1	synonymous_variant	LOW	c.159C>T c.159C>T	p.Pro53Pro p.Pro53Pro	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	2/6	178/1496	159/1323	53/440	chr16	67943208

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr16:67939780	C C	T T	1	a0001c0001t0002 a0001c0001t0002	1	HG02071.hp2 HG02071.hp2	3_prime_UTR_variant	MODIFIER	c.124G>A c.124G>A		LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	6/6				124		chr16	67939780

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr16:67940539	T T	G G	3	a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0029	3	HG02451.hp2 HG02486.hp2 HG02615.hp2 HG02451.hp2 HG02486.hp2 HG02615.hp2	intron_variant	MODIFIER	c.749-61A>C c.749-61A>C	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940539
chr16:67940763	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	HG03195.hp1 HG03195.hp1	intron_variant	MODIFIER	c.749-285G>A c.749-285G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940763
chr16:67940824	C C	A A	1	a0001c0001t0002g0037 a0001c0001t0002g0037	1	HG02071.hp2 HG02071.hp2	intron_variant	MODIFIER	c.749-346G>T c.749-346G>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940824
chr16:67940835	C C	CA CA	11	a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0029 others(8): Show a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0002t0001g0016 a0001c0002t0001g0019 a0002c0003t0001g0010 a0004c0005t0001g0028	36	HG01109.hp1 HG01109.hp2 HG01192.hp1 others(33): Show HG01109.hp1 HG01109.hp2 HG01192.hp1 HG01257.hp1 HG01346.hp2 HG01952.hp1 HG01952.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02135.hp2 HG02300.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp2 HG02717.hp1 HG02735.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp2 HG02976.hp1 HG03225.hp2 HG03540.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04204.hp1 NA18956.hp1 NA18978.hp1 NA18994.hp2 NA19003.hp1 NA19007.hp1 NA19007.hp2 NA19030.hp2 NA19068.hp1	intron_variant	MODIFIER	c.749-358dupT c.749-358dupT	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940835
chr16:67940835	CA CA	C C	9	a0001c0001t0001g0002 a0001c0001t0001g0017 a0001c0001t0001g0024 others(6): Show a0001c0001t0001g0002 a0001c0001t0001g0017 a0001c0001t0001g0024 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0002g0037 a0001c0006t0001g0036	59	HG00438.hp1 HG00639.hp1 HG00738.hp1 others(56): Show HG00438.hp1 HG00639.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01934.hp2 HG01975.hp1 HG02027.hp1 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02109.hp2 HG02132.hp1 HG02145.hp2 HG02451.hp1 HG02451.hp2 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02735.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp1 HG03579.hp2 HG03654.hp1 HG04199.hp1 NA18941.hp1 NA18949.hp1 NA18952.hp2 NA18973.hp2 NA18975.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp1 NA19064.hp1 NA19078.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19090.hp2 NA19240.hp2 NA20805.hp1	intron_variant	MODIFIER	c.749-358delT c.749-358delT	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940835
chr16:67940971	C C	T T	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG00438.hp1 HG00438.hp1	intron_variant	MODIFIER	c.749-493G>A c.749-493G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940971
chr16:67940990	G G	A A	1	a0001c0002t0001g0006 a0001c0002t0001g0006	7	HG02622.hp2 HG02896.hp1 HG03195.hp2 others(4): Show HG02622.hp2 HG02896.hp1 HG03195.hp2 HG03486.hp2 HG03540.hp2 HG06807.hp1 NA18522.hp2	intron_variant	MODIFIER	c.749-512C>T c.749-512C>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67940990
chr16:67941037	C C	T T	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.749-559G>A c.749-559G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67941037
chr16:67941165	G G	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	2	HG01069.hp1 HG01071.hp1 HG01069.hp1 HG01071.hp1	intron_variant	MODIFIER	c.749-687C>T c.749-687C>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67941165
chr16:67941290	C C	T T	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG01884.hp2 HG03516.hp1 HG01884.hp2 HG03516.hp1	intron_variant	MODIFIER	c.749-812G>A c.749-812G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67941290
chr16:67941350	A A	G G	1	a0001c0001t0001g0011 a0001c0001t0001g0011	3	HG03041.hp2 HG03225.hp1 NA19240.hp1 HG03041.hp2 HG03225.hp1 NA19240.hp1	intron_variant	MODIFIER	c.749-872T>C c.749-872T>C	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67941350
chr16:67942307	C C	T T	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG02735.hp2 HG02735.hp2	intron_variant	MODIFIER	c.748+56G>A c.748+56G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	5/5	chr16	67942307
chr16:67942649	G G	A A	3	a0001c0001t0001g0012 a0001c0001t0001g0017 a0001c0001t0001g0039 a0001c0001t0001g0012 a0001c0001t0001g0017 a0001c0001t0001g0039	6	HG00438.hp1 NA18940.hp1 NA18991.hp1 others(3): Show HG00438.hp1 NA18940.hp1 NA18991.hp1 NA19010.hp1 NA19055.hp2 NA19084.hp1	intron_variant	MODIFIER	c.523+22C>T c.523+22C>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	4/5	chr16	67942649
chr16:67942789	G G	T T	4	a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0032 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0032 a0001c0001t0001g0033	17	HG01109.hp1 HG02451.hp1 HG02559.hp2 others(14): Show HG01109.hp1 HG02451.hp1 HG02559.hp2 HG02647.hp2 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG03471.hp1 HG03516.hp2 HG04115.hp2 HG04204.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18992.hp1 NA19043.hp2 NA20129.hp2	intron_variant	MODIFIER	c.428-23C>A c.428-23C>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	3/5	chr16	67942789
chr16:67942831	G G	A A	1	a0001c0002t0001g0019 a0001c0002t0001g0019	1	HG03225.hp2 HG03225.hp2	intron_variant	MODIFIER	c.427+30C>T c.427+30C>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	3/5	chr16	67942831
chr16:67943259	C C	T T	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG01109.hp1 HG01109.hp1	intron_variant	MODIFIER	c.155-47G>A c.155-47G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943259
chr16:67943379	C C	T T	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG03710.hp2 HG03710.hp2	intron_variant	MODIFIER	c.155-167G>A c.155-167G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943379
chr16:67943388	A A	G G	2	a0001c0001t0001g0020 a0001c0001t0001g0031 a0001c0001t0001g0020 a0001c0001t0001g0031	2	HG02965.hp1 HG03540.hp1 HG02965.hp1 HG03540.hp1	intron_variant	MODIFIER	c.155-176T>C c.155-176T>C	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943388
chr16:67943479	T T	C C	25	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(22): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0002g0037 a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0013 a0001c0002t0001g0016 a0001c0002t0001g0019 a0001c0006t0001g0036 a0002c0003t0001g0010	120	HG00438.hp1 HG00639.hp1 HG00738.hp1 others(117): Show HG00438.hp1 HG00639.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp2 HG01099.hp1 HG01109.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01346.hp1 HG01433.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01975.hp1 HG02027.hp1 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02109.hp2 HG02132.hp1 HG02145.hp2 HG02257.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18949.hp1 NA18952.hp2 NA18973.hp2 NA18975.hp2 NA18978.hp2 NA18981.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp2 NA19010.hp1 NA19030.hp2 NA19043.hp2 NA19055.hp2 NA19060.hp1 NA19064.hp1 NA19078.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp2 NA20805.hp1	intron_variant	MODIFIER	c.155-267A>G c.155-267A>G	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943479
chr16:67943507	A A	G G	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	NA18995.hp2 NA18995.hp2	intron_variant	MODIFIER	c.155-295T>C c.155-295T>C	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943507
chr16:67943638	G G	C C	3	a0001c0002t0001g0006 a0001c0002t0001g0013 a0001c0002t0001g0019 a0001c0002t0001g0006 a0001c0002t0001g0013 a0001c0002t0001g0019	10	HG01433.hp2 HG02622.hp2 HG02896.hp1 others(7): Show HG01433.hp2 HG02622.hp2 HG02896.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp2 HG03486.hp2 HG03540.hp2 HG06807.hp1 NA18522.hp2	intron_variant	MODIFIER	c.154+310C>G c.154+310C>G	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943638
chr16:67943682	C C	T T	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.154+266G>A c.154+266G>A	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943682
chr16:67943695	A A	C C	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG02965.hp1 HG02965.hp1	intron_variant	MODIFIER	c.154+253T>G c.154+253T>G	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943695
chr16:67943724	C C	A A	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG01346.hp2 HG01346.hp2	intron_variant	MODIFIER	c.154+224G>T c.154+224G>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943724
chr16:67943781	G G	A A	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG01106.hp2 HG01106.hp2	intron_variant	MODIFIER	c.154+167C>T c.154+167C>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943781
chr16:67943793	A A	C C	3	a0001c0002t0001g0006 a0001c0002t0001g0013 a0001c0002t0001g0019 a0001c0002t0001g0006 a0001c0002t0001g0013 a0001c0002t0001g0019	10	HG01433.hp2 HG02622.hp2 HG02896.hp1 others(7): Show HG01433.hp2 HG02622.hp2 HG02896.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp2 HG03486.hp2 HG03540.hp2 HG06807.hp1 NA18522.hp2	intron_variant	MODIFIER	c.154+155T>G c.154+155T>G	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943793
chr16:67943825	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	2	HG00099.hp1 HG01081.hp2 HG00099.hp1 HG01081.hp2	intron_variant	MODIFIER	c.154+123C>T c.154+123C>T	LCAT	ENSG00000213398.8	transcript	ENST00000264005.10	protein_coding	1/5	chr16	67943825

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 8)

TTranscript Level Haplotype Info (Total: 2)

GGenebody Level Haplotype Info (Total: 41)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 8)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 9)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 41)

Haplotype Details by Sample (Haploid Level) (Total: 304)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 1)

GGenebody Level Haplotype Variants (Intron) (Total: 27)

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Annotation (Repeats)

Annotation (SNP Array)