Joint Open Genome and Omics Platform (JoGo)

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geneid	353145
ensemblid	ENSG00000185966.4
hgncid	29463
symbol	LCE3E
name	late cornified envelope 3E
refseq_nuc	NM_178435.4
refseq_prot	NP_848522.1
ensembl_nuc	ENST00000368789.2
ensembl_prot	ENSP00000357778.1
mane_status	MANE Select
chr	chr1
start	152565654
end	152566780
strand	-
ver	v1.2
region	chr1:152565654-152566780
region5000	chr1:152560654-152571780
regionname0	LCE3E_chr1_152565654_152566780
regionname5000	LCE3E_chr1_152560654_152571780

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	92	457	94	71	228	16	46	178	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0002	0/0	92	2	2	0	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0003	0/0	92	1	1	0	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0004	0/0	92	1	1	0	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0005	0/0	92	1	0	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	279	455	94	71	226	16	46	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
c0002	0/0	279	2	2	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
c0003	0/0	279	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
c0004	0/0	279	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
c0005	0/0	279	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
c0006	0/0	279	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
c0007	0/0	279	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	341	337	83	47	162	13	30	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
t0002	0/0	341	119	10	24	66	3	16	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
t0003	0/0	342	4	4	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
t0004	0/0	341	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
t0005	0/0	341	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	323	73	46	161	13	28	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0002	0/0	117	10	23	65	3	16	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0003	0/0	6	6	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0004	0/0	4	4	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0005	0/0	2	2	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0006	0/0	1	0	0	0	0	1	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0007	0/0	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0008	0/0	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0009	0/0	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0010	0/0	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0011	0/0	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0012	0/0	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0013	0/0	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0014	0/0	1	0	0	0	0	1	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
g0015	0/0	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	279	455	94	71	226	16	46	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0006	0/0	279	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0007	0/0	279	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0002c0002	0/0	279	2	2	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0003c0004	0/0	279	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0004c0005	0/0	279	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0005c0003	0/0	279	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	619	333	80	47	161	13	30	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0001t0002	0/0	619	117	10	23	65	3	16	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0001t0003	0/0	620	4	4	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0001t0005	0/0	619	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0006t0001	0/0	619	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0001c0007t0002	0/0	619	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0002c0002t0001	0/0	619	2	2	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0003c0004t0004	0/0	619	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0004c0005t0001	0/0	619	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780
a0005c0003t0002	0/0	619	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	copy fasta	chr1	152560654	152571780

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	323	73	46	161	13	28	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0001g0003	0/0	6	6	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0001g0006	0/0	1	0	0	0	0	1	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0001g0007	0/0	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0001g0014	0/0	1	0	0	0	0	1	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0001g0015	0/0	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0002g0002	0/0	117	10	23	65	3	16	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0003g0004	0/0	4	4	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0001t0005g0011	0/0	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0006t0001g0012	0/0	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0001c0007t0002g0013	0/0	1	0	0	1	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0002c0002t0001g0005	0/0	2	2	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0003c0004t0004g0009	0/0	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0004c0005t0001g0010	0/0	1	1	0	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
a0005c0003t0002g0008	0/0	1	0	1	0	0	0	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00280	hp1	a0001	c0001	t0002	g0002	EUR	FIN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00408	hp1	a0001	c0001	t0002	g0002	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00423	hp2	a0001	c0001	t0002	g0002	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00438	hp2	a0001	c0001	t0002	g0002	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00621	hp1	a0001	c0001	t0002	g0002	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00642	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00642	hp2	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00673	hp1	a0001	c0001	t0002	g0002	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00673	hp2	a0001	c0001	t0002	g0002	EAS	CHS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG00741	hp2	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01069	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01070	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01071	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01074	hp2	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01081	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01106	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01168	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01175	hp2	a0001	c0001	t0001	g0007	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01192	hp1	a0001	c0001	t0002	g0002	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01256	hp1	a0001	c0001	t0002	g0002	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01257	hp2	a0001	c0001	t0002	g0002	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01258	hp1	a0001	c0001	t0002	g0002	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01361	hp1	a0001	c0001	t0002	g0002	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01496	hp2	a0001	c0001	t0005	g0011	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01516	hp2	a0001	c0001	t0002	g0002	EUR	IBS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01884	hp2	a0001	c0001	t0003	g0004	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01934	hp2	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01943	hp2	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01952	hp2	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01978	hp1	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01978	hp2	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02040	hp1	a0001	c0001	t0002	g0002	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02080	hp1	a0001	c0006	t0001	g0012	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02083	hp1	a0001	c0001	t0002	g0002	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02129	hp1	a0001	c0001	t0002	g0002	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02132	hp2	a0001	c0001	t0002	g0002	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02145	hp1	a0001	c0001	t0003	g0004	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02145	hp2	a0004	c0005	t0001	g0010	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02148	hp2	a0005	c0003	t0002	g0008	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02155	hp2	a0001	c0001	t0002	g0002	EAS	CDX	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02165	hp2	a0001	c0001	t0002	g0002	EAS	CDX	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02258	hp1	a0003	c0004	t0004	g0009	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02273	hp1	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02273	hp2	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02280	hp1	a0001	c0001	t0001	g0003	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02300	hp2	a0001	c0001	t0002	g0002	AMR	PEL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02451	hp1	a0001	c0001	t0001	g0015	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02523	hp1	a0001	c0001	t0002	g0002	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02572	hp2	a0001	c0001	t0001	g0003	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02602	hp2	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02622	hp1	a0001	c0001	t0001	g0003	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02698	hp2	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02723	hp1	a0001	c0001	t0002	g0002	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02735	hp1	a0001	c0001	t0001	g0014	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02735	hp2	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02738	hp1	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02809	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02886	hp1	a0001	c0001	t0002	g0002	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02896	hp2	a0001	c0001	t0001	g0003	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02897	hp2	a0001	c0001	t0001	g0003	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02965	hp1	a0001	c0001	t0002	g0002	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02976	hp2	a0001	c0001	t0003	g0004	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03017	hp1	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03017	hp2	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03098	hp2	a0002	c0002	t0001	g0005	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03139	hp1	a0001	c0001	t0002	g0002	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03209	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03225	hp1	a0002	c0002	t0001	g0005	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03225	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03486	hp1	a0001	c0001	t0002	g0002	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03540	hp1	a0001	c0001	t0002	g0002	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03654	hp1	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03688	hp1	a0001	c0001	t0002	g0002	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03688	hp2	a0001	c0001	t0002	g0002	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03710	hp1	a0001	c0001	t0002	g0002	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03834	hp1	a0001	c0001	t0002	g0002	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03942	hp2	a0001	c0001	t0002	g0002	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04184	hp2	a0001	c0001	t0002	g0002	SAS	BEB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04199	hp2	a0001	c0001	t0002	g0002	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04204	hp2	a0001	c0001	t0002	g0002	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18939	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18940	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18943	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18946	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18948	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18949	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18949	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18950	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18951	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18952	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18952	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18957	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18959	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18960	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18964	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18964	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18967	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18970	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18971	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18972	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18974	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18975	hp1	a0001	c0007	t0002	g0013	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18976	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18976	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18981	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18982	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18984	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18986	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18987	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18990	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18998	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18999	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19001	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19001	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19005	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19007	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19010	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19011	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19011	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19012	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19054	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19063	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19067	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19068	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19072	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19072	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19074	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19075	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19076	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19077	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19078	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19079	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19080	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19081	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19084	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19085	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19086	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19088	hp2	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19090	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19091	hp1	a0001	c0001	t0002	g0002	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA19240	hp2	a0001	c0001	t0001	g0003	AFR	YRI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20129	hp2	a0001	c0001	t0002	g0002	AFR	ASW	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20752	hp2	a0001	c0001	t0002	g0002	EUR	TSI	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20905	hp1	a0001	c0001	t0001	g0006	SAS	GIH	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20905	hp2	a0001	c0001	t0002	g0002	SAS	GIH	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02486	hp1	a0001	c0001	t0003	g0004	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03471	hp1	a0001	c0001	t0002	g0002	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20300	hp1	a0001	c0001	t0002	g0002	AFR	USA	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA20300	hp2	a0001	c0001	t0002	g0002	AFR	USA	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	LCE3E_chr1_152560654_152571780	LCE3E	chr1	152560654	152571780

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:152565956	A A	C C	1	a0003 a0003	1	HG02258.hp1 HG02258.hp1	missense_variant	MODERATE	c.253T>G c.253T>G	p.Cys85Gly p.Cys85Gly	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	317/619	253/279	85/92	chr1	152565956
chr1:152565967	C C	A A	1	a0003 a0003	1	HG02258.hp1 HG02258.hp1	missense_variant	MODERATE	c.242G>T c.242G>T	p.Gly81Val p.Gly81Val	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	306/619	242/279	81/92	chr1	152565967
chr1:152565971	C C	T T	1	a0004 a0004	1	HG02145.hp2 HG02145.hp2	missense_variant	MODERATE	c.238G>A c.238G>A	p.Gly80Arg p.Gly80Arg	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	302/619	238/279	80/92	chr1	152565971
chr1:152566007	A A	G G	1	a0003 a0003	1	HG02258.hp1 HG02258.hp1	missense_variant	MODERATE	c.202T>C c.202T>C	p.Ser68Pro p.Ser68Pro	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	266/619	202/279	68/92	chr1	152566007
chr1:152566058	C C	T T	1	a0005 a0005	1	HG02148.hp2 HG02148.hp2	missense_variant	MODERATE	c.151G>A c.151G>A	p.Gly51Ser p.Gly51Ser	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	215/619	151/279	51/92	chr1	152566058
chr1:152566182	C C	G G	1	a0002 a0002	2	HG03098.hp2 HG03225.hp1 HG03098.hp2 HG03225.hp1	missense_variant	MODERATE	c.27G>C c.27G>C	p.Gln9His p.Gln9His	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	91/619	27/279	9/92	chr1	152566182

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:152565942	C C	T T	1	a0003c0004 a0003c0004	1	HG02258.hp1 HG02258.hp1	synonymous_variant	LOW	c.267G>A c.267G>A	p.Gly89Gly p.Gly89Gly	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	331/619	267/279	89/92	chr1	152565942
chr1:152565948	A A	G G	1	a0003c0004 a0003c0004	1	HG02258.hp1 HG02258.hp1	synonymous_variant	LOW	c.261T>C c.261T>C	p.Gly87Gly p.Gly87Gly	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	325/619	261/279	87/92	chr1	152565948
chr1:152565951	G G	A A	1	a0003c0004 a0003c0004	1	HG02258.hp1 HG02258.hp1	synonymous_variant	LOW	c.258C>T c.258C>T	p.His86His p.His86His	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	322/619	258/279	86/92	chr1	152565951
chr1:152565972	G G	A A	1	a0001c0006 a0001c0006	1	HG02080.hp1 HG02080.hp1	synonymous_variant	LOW	c.237C>T c.237C>T	p.Gly79Gly p.Gly79Gly	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	301/619	237/279	79/92	chr1	152565972
chr1:152566065	G G	A A	1	a0001c0007 a0001c0007	1	NA18975.hp1 NA18975.hp1	synonymous_variant	LOW	c.144C>T c.144C>T	p.Ser48Ser p.Ser48Ser	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	208/619	144/279	48/92	chr1	152566065

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:152565798	G G	GA GA	1	a0001c0001t0003 a0001c0001t0003	4	HG01884.hp2 HG02145.hp1 HG02486.hp1 others(1): Show HG01884.hp2 HG02145.hp1 HG02486.hp1 HG02976.hp2	3_prime_UTR_variant	MODIFIER	c.131dupT c.131dupT	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	131	chr1	152565798
chr1:152565882	G G	C C	5	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0007t0002 a0005c0003t0002	124	HG00280.hp1 HG00408.hp1 HG00423.hp2 others(121): Show HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00438.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01168.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp2 HG02486.hp1 HG02523.hp1 HG02602.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp1 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03834.hp1 HG03942.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp2 NA18939.hp2 NA18940.hp1 NA18943.hp2 NA18946.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18964.hp1 NA18964.hp2 NA18967.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18974.hp2 NA18975.hp1 NA18976.hp2 NA18981.hp1 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18987.hp1 NA18990.hp2 NA18998.hp1 NA18999.hp1 NA19001.hp1 NA19005.hp1 NA19007.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19063.hp2 NA19067.hp2 NA19068.hp1 NA19074.hp2 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.48C>G c.48C>G	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	48	chr1	152565882
chr1:152565905	G G	A A	1	a0001c0001t0005 a0001c0001t0005	1	HG01496.hp2 HG01496.hp2	3_prime_UTR_variant	MODIFIER	c.25C>T c.25C>T	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	25	chr1	152565905
chr1:152565926	T T	C C	1	a0003c0004t0004 a0003c0004t0004	1	HG02258.hp1 HG02258.hp1	3_prime_UTR_variant	MODIFIER	c.4A>G c.4A>G	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	4	chr1	152565926
chr1:152565927	G G	A A	1	a0003c0004t0004 a0003c0004t0004	1	HG02258.hp1 HG02258.hp1	3_prime_UTR_variant	MODIFIER	c.3C>T c.3C>T	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	3	chr1	152565927
chr1:152565929	A A	G G	1	a0003c0004t0004 a0003c0004t0004	1	HG02258.hp1 HG02258.hp1	3_prime_UTR_variant	MODIFIER	c.1T>C c.1T>C	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	2/2	1	chr1	152565929

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr1:152566245	C C	T T	1	a0001c0001t0001g0007 a0001c0001t0001g0007	1	HG01175.hp2 HG01175.hp2	intron_variant	MODIFIER	c.-21-16G>A c.-21-16G>A	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	1/1	chr1	152566245
chr1:152566306	G G	C C	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG02735.hp1 HG02735.hp1	intron_variant	MODIFIER	c.-21-77C>G c.-21-77C>G	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	1/1	chr1	152566306
chr1:152566607	C C	T T	1	a0001c0001t0001g0006 a0001c0001t0001g0006	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-22+131G>A c.-22+131G>A	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	1/1	chr1	152566607
chr1:152566607	CA CA	C C	1	a0001c0001t0001g0003 a0001c0001t0001g0003	6	HG02280.hp1 HG02572.hp2 HG02622.hp1 others(3): Show HG02280.hp1 HG02572.hp2 HG02622.hp1 HG02896.hp2 HG02897.hp2 NA19240.hp2	intron_variant	MODIFIER	c.-22+130delT c.-22+130delT	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	1/1	chr1	152566607
chr1:152566693	G G	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.-22+45C>G c.-22+45C>G	LCE3E	ENSG00000185966.4	transcript	ENST00000368789.2	protein_coding	1/1	chr1	152566693

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 7)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 15)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 7)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 10)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 15)

Haplotype Details by Sample (Haploid Level) (Total: 462)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 6)

CCoding Level Variants (Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 6)

GGenebody Level Haplotype Variants (Intron) (Total: 5)

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Annotation (Repeats)

Annotation (SNP Array)