Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	9355
ensemblid	ENSG00000106689.11
hgncid	6594
symbol	LHX2
name	LIM homeobox 2
refseq_nuc	NM_004789.4
refseq_prot	NP_004780.3
ensembl_nuc	ENST00000373615.9
ensembl_prot	ENSP00000362717.4
mane_status	MANE Select
chr	chr9
start	124011768
end	124033301
strand	+
ver	v1.2
region	chr9:124011768-124033301
region5000	chr9:124006768-124038301
regionname0	LHX2_chr9_124011768_124033301
regionname5000	LHX2_chr9_124006768_124038301

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	406	398	100	70	174	12	40	127	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0002	0/0	406	4	0	0	4	0	0	3	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1221	258	79	41	104	8	24	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0002	0/0	1221	120	20	26	56	3	15	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0003	0/0	1221	8	0	0	8	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0004	0/0	1221	7	0	2	5	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0005	0/0	1221	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0006	0/0	1221	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0007	0/0	1221	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0008	0/0	1221	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0009	0/0	1221	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
c0010	0/0	1221	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1176	224	71	33	83	8	27	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0002	0/0	1177	66	5	14	42	0	5	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0003	0/0	1177	55	3	12	36	2	2	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0004	0/0	1176	31	14	7	4	2	4	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0005	0/0	1175	11	6	0	5	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0006	0/0	1177	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0007	0/0	1177	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0008	0/0	1176	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0009	0/0	1176	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0010	0/0	1176	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0011	0/0	1177	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0012	0/0	1177	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0013	0/0	1176	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0014	0/0	1176	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0015	0/0	1177	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
t0016	0/0	1176	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	58	5	4	40	2	7	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0002	0/0	34	7	7	13	0	7	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0003	0/0	32	0	9	20	0	3	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0004	0/0	16	9	4	0	2	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0005	0/0	11	0	5	6	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0006	0/0	7	4	2	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0007	0/0	7	0	0	7	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0008	0/0	6	0	4	0	1	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0009	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0010	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0011	1/1	4	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0012	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0013	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0014	0/0	4	0	4	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0015	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0016	0/0	3	0	0	3	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0017	0/0	3	0	0	3	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0018	0/0	3	2	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0019	0/0	3	0	0	3	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0020	0/0	3	3	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0021	0/0	3	3	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0022	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0023	0/0	2	1	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0024	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0025	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0026	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0027	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0028	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0029	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0030	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0031	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0032	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0033	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0034	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0035	0/0	2	1	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0036	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0037	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0038	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0039	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0040	0/0	2	1	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0041	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0042	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0043	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0044	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0045	0/0	2	0	0	0	0	2	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0046	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0047	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0048	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0049	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0050	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0051	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0052	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0053	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0054	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0055	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0056	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0057	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0058	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0059	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0060	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0061	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0062	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0063	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0064	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0065	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0066	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0067	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0068	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0069	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0070	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0071	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0072	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0073	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0074	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0075	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0076	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0077	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0078	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0079	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0080	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0081	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0082	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0083	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0084	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0085	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0086	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0087	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0088	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0089	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0090	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0091	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0092	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0093	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0094	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0095	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0096	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0097	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0098	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0099	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0100	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0101	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0102	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0103	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0104	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0105	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0106	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0107	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0108	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0109	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0110	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0111	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0112	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0113	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0114	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0115	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0116	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0117	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0118	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0119	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0120	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0121	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0122	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0123	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0124	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0125	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0126	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0127	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0128	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0129	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0130	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0131	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0132	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0133	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0134	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0135	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0136	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0137	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0138	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0139	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0140	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0141	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0142	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0143	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0144	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0145	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0146	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0147	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0148	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0149	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0150	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0151	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0152	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0153	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0154	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0155	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0156	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0157	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0158	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0159	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0160	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0161	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0162	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0163	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0164	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0165	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0166	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0167	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0168	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0169	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0170	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0171	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0172	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0173	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0174	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0175	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0176	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0177	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0178	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0179	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
g0180	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1221	258	79	41	104	8	24	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002	0/0	1221	120	20	26	56	3	15	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0003	0/0	1221	8	0	0	8	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0004	0/0	1221	7	0	2	5	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0006	0/0	1221	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0007	0/0	1221	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0008	0/0	1221	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0009	0/0	1221	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0010	0/0	1221	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0002c0005	0/0	1221	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	2396	146	56	17	51	4	16	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0002	0/0	2397	9	5	2	0	0	2	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0003	0/0	2397	52	1	11	36	2	2	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0004	0/0	2396	31	14	7	4	2	4	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0005	0/0	2395	8	3	0	5	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0006	0/0	2397	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0007	0/0	2397	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0008	0/0	2396	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0009	0/0	2396	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0010	0/0	2396	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0012	0/0	2397	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0015	0/0	2397	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0001t0016	0/0	2396	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002t0001	0/0	2396	72	15	16	27	3	11	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002t0002	0/0	2397	42	0	10	29	0	3	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002t0003	0/0	2397	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002t0005	0/0	2395	3	3	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002t0011	0/0	2397	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0002t0014	0/0	2396	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0003t0002	0/0	2397	8	0	0	8	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0004t0002	0/0	2397	7	0	2	5	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0006t0013	0/0	2396	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0007t0003	0/0	2397	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0008t0001	0/0	2396	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0009t0003	0/0	2397	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0001c0010t0001	0/0	2396	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301
a0002c0005t0001	0/0	2396	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	copy fasta	chr9	124006768	124038301

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	33	5	1	19	2	6	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0006	0/0	4	4	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0008	0/0	6	0	4	0	1	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0009	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0010	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0011	1/1	4	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0013	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0017	0/0	3	0	0	3	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0018	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0020	0/0	3	3	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0023	0/0	2	1	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0026	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0028	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0029	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0031	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0033	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0036	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0037	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0038	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0042	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0047	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0054	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0055	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0057	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0058	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0059	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0062	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0064	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0066	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0068	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0070	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0071	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0073	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0074	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0075	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0078	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0081	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0082	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0083	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0084	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0085	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0086	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0087	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0092	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0094	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0095	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0096	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0098	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0099	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0100	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0102	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0106	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0107	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0108	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0109	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0110	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0112	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0113	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0116	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0117	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0145	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0146	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0147	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0148	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0149	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0151	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0152	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0153	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0154	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0155	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0156	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0157	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0158	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0174	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0176	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0001g0177	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0001	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0024	0/0	2	2	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0035	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0063	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0067	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0104	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0114	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0002g0118	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0001	0/0	13	0	0	13	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0005	0/0	8	0	4	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0006	0/0	3	0	2	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0010	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0016	0/0	3	0	0	3	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0018	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0025	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0030	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0031	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0032	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0034	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0065	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0079	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0080	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0088	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0089	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0091	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0093	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0101	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0103	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0105	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0111	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0115	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0150	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0003g0180	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0004	0/0	16	9	4	0	2	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0045	0/0	2	0	0	0	0	2	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0046	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0160	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0162	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0163	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0164	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0166	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0167	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0168	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0170	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0171	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0172	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0004g0173	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0005g0001	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0005g0037	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0005g0061	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0005g0069	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0005g0072	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0006g0005	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0007g0165	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0007g0169	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0008g0001	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0009g0001	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0010g0097	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0012g0001	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0015g0001	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0001t0016g0178	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0002	0/0	33	7	7	12	0	7	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0003	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0014	0/0	4	0	4	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0021	0/0	3	3	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0027	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0039	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0040	0/0	2	1	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0041	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0043	0/0	2	0	2	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0044	0/0	2	0	0	2	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0052	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0119	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0120	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0121	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0124	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0125	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0126	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0127	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0129	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0130	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0132	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0133	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0134	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0135	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0137	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0138	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0139	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0140	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0141	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0001g0143	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0003	0/0	24	0	7	14	0	3	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0007	0/0	7	0	0	7	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0049	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0050	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0051	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0122	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0123	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0128	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0131	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0136	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0144	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0159	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0002g0175	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0003g0060	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0005g0027	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0005g0048	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0005g0076	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0011g0077	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0002t0014g0161	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0003t0002g0015	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0003t0002g0019	0/0	3	0	0	3	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0003t0002g0142	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0004t0002g0003	0/0	7	0	2	5	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0006t0013g0001	0/0	1	0	0	0	0	1	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0007t0003g0179	0/0	1	1	0	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0008t0001g0002	0/0	1	0	0	1	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0009t0003g0005	0/0	1	0	1	0	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0001c0010t0001g0090	0/0	1	0	0	0	1	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
a0002c0005t0001g0012	0/0	4	0	0	4	0	0	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0004	g0004	EUR	GBR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00140	hp2	a0001	c0001	t0001	g0008	EUR	GBR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00280	hp1	a0001	c0002	t0001	g0134	EUR	FIN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00280	hp2	a0001	c0002	t0001	g0140	EUR	FIN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00408	hp1	a0002	c0005	t0001	g0012	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00408	hp2	a0001	c0002	t0002	g0007	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00423	hp1	a0001	c0002	t0001	g0044	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00423	hp2	a0001	c0001	t0003	g0001	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00544	hp1	a0001	c0002	t0002	g0159	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00558	hp1	a0001	c0001	t0003	g0089	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00558	hp2	a0001	c0001	t0001	g0013	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00597	hp1	a0001	c0002	t0002	g0003	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00609	hp2	a0001	c0001	t0004	g0173	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00621	hp1	a0001	c0002	t0002	g0003	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00621	hp2	a0001	c0001	t0001	g0013	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00639	hp1	a0001	c0001	t0001	g0008	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00639	hp2	a0001	c0001	t0016	g0178	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00642	hp1	a0001	c0002	t0001	g0002	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00642	hp2	a0001	c0001	t0004	g0163	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00673	hp1	a0001	c0002	t0002	g0007	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00673	hp2	a0001	c0001	t0003	g0001	EAS	CHS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00735	hp1	a0001	c0001	t0001	g0008	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00735	hp2	a0001	c0001	t0001	g0062	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00738	hp1	a0001	c0001	t0001	g0113	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00738	hp2	a0001	c0001	t0001	g0011	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00741	hp1	a0001	c0002	t0001	g0002	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG00741	hp2	a0001	c0002	t0001	g0002	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01069	hp1	a0001	c0001	t0004	g0168	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01069	hp2	a0001	c0001	t0001	g0008	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01071	hp1	a0001	c0001	t0003	g0030	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01071	hp2	a0001	c0001	t0001	g0008	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01074	hp1	a0001	c0002	t0001	g0135	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01074	hp2	a0001	c0001	t0001	g0011	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01081	hp1	a0001	c0001	t0003	g0115	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01081	hp2	a0001	c0002	t0001	g0002	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01099	hp1	a0001	c0001	t0001	g0145	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01099	hp2	a0001	c0002	t0002	g0003	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01106	hp1	a0001	c0001	t0004	g0004	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01106	hp2	a0001	c0002	t0001	g0014	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01167	hp1	a0001	c0001	t0010	g0097	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01167	hp2	a0001	c0002	t0001	g0043	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01168	hp1	a0001	c0001	t0001	g0153	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01168	hp2	a0001	c0001	t0001	g0054	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01169	hp1	a0001	c0001	t0001	g0154	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01169	hp2	a0001	c0002	t0001	g0043	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01175	hp1	a0001	c0001	t0001	g0070	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01175	hp2	a0001	c0002	t0001	g0002	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01192	hp1	a0001	c0001	t0003	g0030	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01192	hp2	a0001	c0002	t0002	g0144	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01243	hp1	a0001	c0001	t0004	g0004	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01243	hp2	a0001	c0001	t0001	g0109	AMR	PUR	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01255	hp1	a0001	c0001	t0003	g0025	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01255	hp2	a0001	c0009	t0003	g0005	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01257	hp1	a0001	c0002	t0002	g0003	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01257	hp2	a0001	c0001	t0009	g0001	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01258	hp1	a0001	c0001	t0009	g0001	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01258	hp2	a0001	c0002	t0002	g0003	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01346	hp1	a0001	c0002	t0001	g0127	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01346	hp2	a0001	c0002	t0001	g0014	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01358	hp1	a0001	c0001	t0004	g0004	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01358	hp2	a0001	c0002	t0002	g0003	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01433	hp2	a0001	c0001	t0003	g0006	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01496	hp1	a0001	c0002	t0001	g0002	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01496	hp2	a0001	c0001	t0003	g0005	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01515	hp2	a0001	c0001	t0003	g0150	EUR	IBS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01516	hp1	a0001	c0001	t0001	g0146	EUR	IBS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01516	hp2	a0001	c0002	t0001	g0139	EUR	IBS	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01884	hp2	a0001	c0001	t0001	g0156	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01891	hp1	a0001	c0002	t0001	g0002	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01891	hp2	a0001	c0002	t0003	g0060	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01928	hp1	a0001	c0001	t0003	g0005	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01928	hp2	a0001	c0004	t0002	g0003	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01943	hp1	a0001	c0001	t0004	g0171	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01943	hp2	a0001	c0002	t0002	g0003	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01952	hp1	a0001	c0001	t0001	g0064	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01952	hp2	a0001	c0002	t0001	g0014	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01975	hp1	a0001	c0001	t0002	g0118	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01975	hp2	a0001	c0002	t0002	g0003	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01978	hp1	a0001	c0002	t0002	g0003	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01978	hp2	a0001	c0002	t0001	g0002	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01981	hp1	a0001	c0002	t0001	g0125	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01981	hp2	a0001	c0002	t0001	g0014	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01993	hp1	a0001	c0001	t0003	g0006	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01993	hp2	a0001	c0001	t0003	g0005	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02015	hp1	a0001	c0002	t0002	g0003	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02015	hp2	a0001	c0002	t0001	g0041	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02027	hp1	a0001	c0001	t0003	g0005	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02027	hp2	a0001	c0001	t0003	g0031	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02040	hp1	a0001	c0001	t0003	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02040	hp2	a0001	c0001	t0001	g0023	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02055	hp1	a0001	c0001	t0001	g0106	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02055	hp2	a0001	c0001	t0005	g0037	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02056	hp1	a0001	c0002	t0001	g0041	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02056	hp2	a0001	c0001	t0003	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02071	hp1	a0001	c0001	t0005	g0072	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02071	hp2	a0001	c0001	t0003	g0010	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02074	hp1	a0001	c0004	t0002	g0003	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02074	hp2	a0001	c0001	t0005	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02080	hp1	a0001	c0001	t0001	g0099	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02083	hp2	a0001	c0002	t0001	g0002	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02129	hp1	a0001	c0002	t0002	g0003	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02129	hp2	a0001	c0001	t0001	g0117	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02132	hp2	a0001	c0002	t0001	g0121	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02135	hp1	a0001	c0002	t0001	g0044	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02135	hp2	a0001	c0001	t0003	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02145	hp1	a0001	c0001	t0001	g0026	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02145	hp2	a0001	c0001	t0001	g0073	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02155	hp1	a0001	c0001	t0003	g0001	EAS	CDX	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02155	hp2	a0001	c0001	t0001	g0174	EAS	CDX	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02165	hp1	a0001	c0001	t0003	g0093	EAS	CDX	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02165	hp2	a0001	c0001	t0003	g0001	EAS	CDX	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02257	hp1	a0001	c0001	t0002	g0114	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02257	hp2	a0001	c0001	t0001	g0055	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02258	hp1	a0001	c0001	t0001	g0176	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02258	hp2	a0001	c0001	t0004	g0004	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02273	hp1	a0001	c0001	t0004	g0004	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02273	hp2	a0001	c0004	t0002	g0003	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02280	hp1	a0001	c0001	t0001	g0058	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02280	hp2	a0001	c0001	t0001	g0036	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02293	hp1	a0001	c0001	t0001	g0100	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02293	hp2	a0001	c0001	t0003	g0005	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02300	hp1	a0001	c0002	t0002	g0128	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02300	hp2	a0001	c0001	t0002	g0001	AMR	PEL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02451	hp1	a0001	c0001	t0001	g0087	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02451	hp2	a0001	c0001	t0001	g0036	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02523	hp1	a0001	c0001	t0003	g0001	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02523	hp2	a0001	c0002	t0001	g0039	EAS	KHV	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02572	hp1	a0001	c0001	t0001	g0094	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02572	hp2	a0001	c0001	t0001	g0158	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02602	hp1	a0001	c0002	t0001	g0040	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02615	hp1	a0001	c0001	t0004	g0004	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02615	hp2	a0001	c0002	t0001	g0052	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02622	hp1	a0001	c0001	t0001	g0018	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02622	hp2	a0001	c0001	t0005	g0069	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02630	hp1	a0001	c0002	t0005	g0076	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02630	hp2	a0001	c0002	t0014	g0161	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02647	hp1	a0001	c0001	t0001	g0028	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02647	hp2	a0001	c0001	t0001	g0029	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02683	hp1	a0001	c0001	t0002	g0104	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02683	hp2	a0001	c0001	t0004	g0045	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02717	hp2	a0001	c0001	t0001	g0074	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02723	hp1	a0001	c0001	t0001	g0020	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02723	hp2	a0001	c0002	t0001	g0002	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02735	hp1	a0001	c0001	t0001	g0008	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02735	hp2	a0001	c0006	t0013	g0001	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02738	hp1	a0001	c0002	t0001	g0002	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02738	hp2	a0001	c0001	t0004	g0004	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02809	hp1	a0001	c0001	t0003	g0180	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02809	hp2	a0001	c0001	t0001	g0018	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02818	hp1	a0001	c0001	t0001	g0042	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02818	hp2	a0001	c0001	t0001	g0037	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02886	hp1	a0001	c0001	t0001	g0029	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02886	hp2	a0001	c0002	t0001	g0002	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02895	hp1	a0001	c0001	t0001	g0033	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02895	hp2	a0001	c0002	t0001	g0002	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02896	hp1	a0001	c0002	t0001	g0002	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02896	hp2	a0001	c0001	t0001	g0148	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02897	hp1	a0001	c0001	t0001	g0033	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02897	hp2	a0001	c0002	t0001	g0002	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02922	hp1	a0001	c0001	t0004	g0160	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02922	hp2	a0001	c0001	t0001	g0006	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02965	hp1	a0001	c0001	t0004	g0167	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02965	hp2	a0001	c0002	t0005	g0027	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02970	hp1	a0001	c0002	t0001	g0021	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02970	hp2	a0001	c0001	t0001	g0020	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02976	hp1	a0001	c0001	t0001	g0107	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02976	hp2	a0001	c0001	t0001	g0020	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03017	hp2	a0001	c0002	t0001	g0002	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03041	hp1	a0001	c0001	t0001	g0149	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03098	hp1	a0001	c0001	t0001	g0028	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03098	hp2	a0001	c0001	t0001	g0059	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03130	hp1	a0001	c0002	t0001	g0021	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03130	hp2	a0001	c0001	t0004	g0004	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03139	hp1	a0001	c0001	t0001	g0006	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03139	hp2	a0001	c0001	t0001	g0066	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03195	hp1	a0001	c0001	t0001	g0038	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03195	hp2	a0001	c0001	t0001	g0047	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03209	hp1	a0001	c0001	t0004	g0004	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03209	hp2	a0001	c0001	t0001	g0026	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03225	hp1	a0001	c0001	t0004	g0004	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03225	hp2	a0001	c0002	t0001	g0002	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03239	hp1	a0001	c0001	t0001	g0151	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03239	hp2	a0001	c0001	t0002	g0035	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03453	hp1	a0001	c0001	t0002	g0024	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03486	hp1	a0001	c0001	t0001	g0038	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03486	hp2	a0001	c0001	t0004	g0170	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03490	hp1	a0001	c0002	t0001	g0002	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03490	hp2	a0001	c0002	t0001	g0002	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03491	hp1	a0001	c0001	t0001	g0068	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03491	hp2	a0001	c0002	t0001	g0133	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03516	hp1	a0001	c0001	t0001	g0042	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03516	hp2	a0001	c0002	t0005	g0048	AFR	ESN	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03540	hp1	a0001	c0001	t0004	g0004	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03540	hp2	a0001	c0001	t0002	g0067	AFR	GWD	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03579	hp1	a0001	c0002	t0001	g0132	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03579	hp2	a0001	c0001	t0004	g0004	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03669	hp1	a0001	c0002	t0002	g0003	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03669	hp2	a0001	c0001	t0004	g0172	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03688	hp1	a0001	c0001	t0004	g0045	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03688	hp2	a0001	c0002	t0002	g0003	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03704	hp1	a0001	c0001	t0001	g0078	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03704	hp2	a0001	c0002	t0011	g0077	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03710	hp1	a0001	c0001	t0001	g0152	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03710	hp2	a0001	c0001	t0001	g0092	SAS	PJL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03831	hp1	a0001	c0001	t0003	g0088	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03831	hp2	a0001	c0002	t0001	g0002	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03834	hp2	a0001	c0002	t0001	g0137	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03927	hp1	a0001	c0002	t0001	g0120	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03927	hp2	a0001	c0001	t0001	g0102	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03942	hp1	a0001	c0001	t0001	g0071	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04115	hp1	a0001	c0001	t0003	g0105	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04115	hp2	a0001	c0001	t0001	g0096	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04184	hp1	a0001	c0002	t0001	g0002	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04204	hp1	a0001	c0001	t0001	g0082	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04204	hp2	a0001	c0002	t0002	g0003	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04228	hp1	a0001	c0002	t0001	g0002	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18522	hp1	a0001	c0002	t0001	g0027	AFR	YRI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18522	hp2	a0001	c0001	t0001	g0157	AFR	YRI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18612	hp1	a0001	c0002	t0001	g0039	EAS	CHB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18612	hp2	a0001	c0001	t0001	g0053	EAS	CHB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18747	hp2	a0001	c0001	t0003	g0032	EAS	CHB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18906	hp1	a0001	c0001	t0001	g0084	AFR	YRI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18906	hp2	a0001	c0001	t0002	g0024	AFR	YRI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18939	hp1	a0001	c0004	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18940	hp1	a0001	c0001	t0005	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18940	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18941	hp1	a0001	c0002	t0001	g0129	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18941	hp2	a0001	c0001	t0003	g0080	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18942	hp1	a0001	c0001	t0003	g0034	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18942	hp2	a0001	c0001	t0006	g0005	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18943	hp2	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18945	hp1	a0001	c0001	t0007	g0169	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18948	hp1	a0001	c0001	t0006	g0005	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18948	hp2	a0001	c0002	t0001	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18952	hp1	a0001	c0003	t0002	g0015	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18952	hp2	a0001	c0002	t0002	g0007	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18953	hp1	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18956	hp1	a0001	c0002	t0002	g0049	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18956	hp2	a0001	c0001	t0007	g0165	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18957	hp1	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18957	hp2	a0001	c0004	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18961	hp1	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18961	hp2	a0001	c0001	t0003	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18962	hp1	a0001	c0001	t0008	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18962	hp2	a0001	c0001	t0003	g0016	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18963	hp1	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18963	hp2	a0001	c0001	t0001	g0017	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18964	hp1	a0001	c0001	t0012	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18964	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18965	hp1	a0001	c0001	t0001	g0081	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18965	hp2	a0001	c0001	t0001	g0009	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18966	hp1	a0001	c0001	t0003	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18966	hp2	a0001	c0003	t0002	g0015	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18967	hp1	a0001	c0001	t0001	g0110	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18967	hp2	a0001	c0001	t0001	g0009	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18968	hp1	a0001	c0001	t0001	g0022	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18968	hp2	a0001	c0001	t0003	g0018	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18970	hp1	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18970	hp2	a0001	c0003	t0002	g0019	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18971	hp1	a0001	c0001	t0008	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18971	hp2	a0001	c0004	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18973	hp1	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18973	hp2	a0001	c0001	t0001	g0013	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18974	hp1	a0001	c0001	t0003	g0032	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18974	hp2	a0001	c0001	t0005	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18975	hp1	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18975	hp2	a0001	c0001	t0003	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18977	hp1	a0001	c0001	t0001	g0056	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18977	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18978	hp1	a0001	c0002	t0002	g0050	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18978	hp2	a0001	c0001	t0001	g0095	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18981	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18982	hp1	a0001	c0002	t0001	g0143	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18982	hp2	a0001	c0002	t0001	g0130	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18983	hp1	a0001	c0002	t0002	g0123	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18983	hp2	a0001	c0001	t0001	g0057	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18984	hp1	a0001	c0003	t0002	g0019	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18984	hp2	a0001	c0002	t0001	g0138	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18986	hp1	a0001	c0003	t0002	g0019	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18986	hp2	a0002	c0005	t0001	g0012	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18988	hp1	a0001	c0001	t0001	g0083	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18988	hp2	a0001	c0003	t0002	g0015	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18989	hp1	a0001	c0001	t0001	g0022	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18989	hp2	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18990	hp1	a0002	c0005	t0001	g0012	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18990	hp2	a0001	c0001	t0003	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA18999	hp2	a0001	c0002	t0002	g0007	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19001	hp1	a0001	c0001	t0003	g0079	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19001	hp2	a0002	c0005	t0001	g0012	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19004	hp1	a0001	c0001	t0003	g0103	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19004	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19006	hp1	a0001	c0001	t0003	g0005	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19006	hp2	a0001	c0003	t0002	g0142	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19007	hp1	a0001	c0001	t0003	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19007	hp2	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19009	hp1	a0001	c0002	t0001	g0126	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19010	hp1	a0001	c0001	t0003	g0016	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19010	hp2	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19011	hp1	a0001	c0001	t0001	g0017	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19011	hp2	a0001	c0002	t0001	g0124	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19012	hp1	a0001	c0001	t0003	g0111	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19012	hp2	a0001	c0001	t0003	g0101	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19030	hp1	a0001	c0001	t0001	g0108	AFR	LWK	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19030	hp2	a0001	c0001	t0004	g0162	AFR	LWK	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19043	hp1	a0001	c0001	t0001	g0023	AFR	LWK	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19043	hp2	a0001	c0001	t0001	g0006	AFR	LWK	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19057	hp1	a0001	c0001	t0001	g0034	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19057	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19058	hp1	a0001	c0001	t0001	g0085	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19058	hp2	a0001	c0002	t0001	g0141	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19060	hp2	a0001	c0001	t0003	g0005	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19063	hp1	a0001	c0001	t0003	g0005	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19064	hp1	a0001	c0001	t0003	g0091	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19064	hp2	a0001	c0001	t0001	g0009	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19065	hp1	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19065	hp2	a0001	c0001	t0001	g0010	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19066	hp1	a0001	c0001	t0003	g0010	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19066	hp2	a0001	c0001	t0004	g0046	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19067	hp1	a0001	c0002	t0002	g0007	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19067	hp2	a0001	c0001	t0001	g0031	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19068	hp1	a0001	c0004	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19068	hp2	a0001	c0001	t0015	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19070	hp2	a0001	c0001	t0001	g0009	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19074	hp2	a0001	c0002	t0002	g0003	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19075	hp1	a0001	c0001	t0001	g0116	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19075	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19077	hp1	a0001	c0001	t0004	g0046	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19077	hp2	a0001	c0002	t0002	g0007	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19079	hp1	a0001	c0001	t0001	g0013	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19079	hp2	a0001	c0002	t0002	g0007	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19080	hp1	a0001	c0002	t0002	g0131	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19080	hp2	a0001	c0001	t0004	g0164	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19081	hp1	a0001	c0001	t0003	g0065	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19081	hp2	a0001	c0001	t0003	g0016	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19082	hp1	a0001	c0003	t0002	g0015	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19082	hp2	a0001	c0001	t0001	g0017	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19084	hp1	a0001	c0001	t0001	g0155	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19084	hp2	a0001	c0001	t0005	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19085	hp1	a0001	c0001	t0001	g0010	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19085	hp2	a0001	c0008	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19086	hp1	a0001	c0002	t0002	g0175	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19086	hp2	a0001	c0001	t0001	g0086	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19087	hp1	a0001	c0002	t0002	g0136	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19087	hp2	a0001	c0002	t0002	g0051	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19088	hp2	a0001	c0002	t0001	g0002	EAS	JPT	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA19240	hp2	a0001	c0001	t0001	g0098	AFR	YRI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20129	hp1	a0001	c0001	t0002	g0063	AFR	ASW	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20129	hp2	a0001	c0001	t0001	g0147	AFR	ASW	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20752	hp2	a0001	c0010	t0001	g0090	EUR	TSI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20805	hp1	a0001	c0001	t0004	g0004	EUR	TSI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20805	hp2	a0001	c0001	t0003	g0006	EUR	TSI	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01123	hp1	a0001	c0001	t0003	g0025	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG01123	hp2	a0001	c0002	t0002	g0122	AMR	CLM	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02109	hp1	a0001	c0007	t0003	g0179	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02109	hp2	a0001	c0001	t0004	g0004	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02486	hp1	a0001	c0001	t0001	g0047	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02486	hp2	a0001	c0002	t0001	g0119	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02559	hp1	a0001	c0002	t0001	g0021	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG02559	hp2	a0001	c0001	t0001	g0006	AFR	ACB	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03471	hp1	a0001	c0001	t0001	g0075	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG03471	hp2	a0001	c0001	t0004	g0166	AFR	MSL	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG06807	hp1	a0001	c0001	t0001	g0035	AFR	USA	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
HG06807	hp2	a0001	c0001	t0005	g0061	AFR	USA	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20300	hp1	a0001	c0002	t0001	g0040	AFR	USA	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA20300	hp2	a0001	c0001	t0001	g0177	AFR	USA	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA21309	hp1	a0001	c0001	t0004	g0004	AFR	LWK	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
NA21309	hp2	a0001	c0001	t0001	g0112	AFR	LWK	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0011	REF	REF	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0011	REF	REF	LHX2_chr9_124006768_124038301	LHX2	chr9	124006768	124038301

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr9:124015447	G G	A A	1	a0002 a0002	4	HG00408.hp1 NA18986.hp2 NA18990.hp1 others(1): Show HG00408.hp1 NA18986.hp2 NA18990.hp1 NA19001.hp2	missense_variant	MODERATE	c.649G>A c.649G>A	p.Val217Met p.Val217Met	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/5	1230/2396	649/1221	217/406			chr9	124015447

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr9:124014023	G G	C C	1	a0001c0006 a0001c0006	1	HG02735.hp2 HG02735.hp2	synonymous_variant	LOW	c.183G>C c.183G>C	p.Ser61Ser p.Ser61Ser	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/5	764/2396	183/1221	61/406	chr9	124014023
chr9:124014131	C C	T T	1	a0001c0010 a0001c0010	1	NA20752.hp2 NA20752.hp2	synonymous_variant	LOW	c.291C>T c.291C>T	p.Asp97Asp p.Asp97Asp	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/5	872/2396	291/1221	97/406	chr9	124014131
chr9:124015182	G G	C C	1	a0001c0007 a0001c0007	1	HG02109.hp1 HG02109.hp1	synonymous_variant	LOW	c.384G>C c.384G>C	p.Val128Val p.Val128Val	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/5	965/2396	384/1221	128/406	chr9	124015182
chr9:124021136	C C	T T	1	a0001c0004 a0001c0004	7	HG01928.hp2 HG02074.hp1 HG02273.hp2 others(4): Show HG01928.hp2 HG02074.hp1 HG02273.hp2 NA18939.hp1 NA18957.hp2 NA18971.hp2 NA19068.hp1	synonymous_variant	LOW	c.765C>T c.765C>T	p.Asp255Asp p.Asp255Asp	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/5	1346/2396	765/1221	255/406	chr9	124021136
chr9:124021154	G G	C C	4	a0001c0002 a0001c0003 a0001c0004 others(1): Show a0001c0002 a0001c0003 a0001c0004 a0001c0008	136	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(133): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	synonymous_variant	LOW	c.783G>C c.783G>C	p.Pro261Pro p.Pro261Pro	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/5	1364/2396	783/1221	261/406	chr9	124021154
chr9:124032503	G G	A A	1	a0001c0008 a0001c0008	1	NA19085.hp2 NA19085.hp2	synonymous_variant	LOW	c.1017G>A c.1017G>A	p.Ala339Ala p.Ala339Ala	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	1598/2396	1017/1221	339/406	chr9	124032503
chr9:124032533	G G	A A	2	a0001c0003 a0001c0009 a0001c0003 a0001c0009	9	HG01255.hp2 NA18952.hp1 NA18966.hp2 others(6): Show HG01255.hp2 NA18952.hp1 NA18966.hp2 NA18970.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp2 NA19006.hp2 NA19082.hp1	synonymous_variant	LOW	c.1047G>A c.1047G>A	p.Pro349Pro p.Pro349Pro	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	1628/2396	1047/1221	349/406	chr9	124032533

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr9:124011819	C C	G G	1	a0001c0001t0009 a0001c0001t0009	2	HG01257.hp2 HG01258.hp1 HG01257.hp2 HG01258.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-530C>G c.-530C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5			chr9	124011819
chr9:124012009	G G	T T	1	a0001c0001t0008 a0001c0001t0008	2	NA18962.hp1 NA18971.hp1 NA18962.hp1 NA18971.hp1	5_prime_UTR_variant	MODIFIER	c.-340G>T c.-340G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	340		chr9	124012009
chr9:124012070	C C	T T	1	a0001c0001t0016 a0001c0001t0016	1	HG00639.hp2 HG00639.hp2	5_prime_UTR_variant	MODIFIER	c.-279C>T c.-279C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	279		chr9	124012070
chr9:124012236	G G	T T	2	a0001c0001t0004 a0001c0001t0007 a0001c0001t0004 a0001c0001t0007	33	HG00140.hp1 HG00609.hp2 HG00642.hp2 others(30): Show HG00140.hp1 HG00609.hp2 HG00642.hp2 HG01069.hp1 HG01106.hp1 HG01243.hp1 HG01358.hp1 HG01943.hp1 HG02109.hp2 HG02258.hp2 HG02273.hp1 HG02615.hp1 HG02683.hp2 HG02738.hp2 HG02922.hp1 HG02965.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 NA18945.hp1 NA18956.hp2 NA19030.hp2 NA19066.hp2 NA19077.hp1 NA19080.hp2 NA20805.hp1 NA21309.hp1	5_prime_UTR_variant	MODIFIER	c.-113G>T c.-113G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	113		chr9	124012236
chr9:124012255	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01167.hp1 HG01167.hp1	5_prime_UTR_variant	MODIFIER	c.-94G>A c.-94G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	94		chr9	124012255
chr9:124012261	G G	A A	1	a0001c0002t0011 a0001c0002t0011	1	HG03704.hp2 HG03704.hp2	5_prime_UTR_variant	MODIFIER	c.-88G>A c.-88G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	88		chr9	124012261
chr9:124012270	A A	G G	1	a0001c0001t0006 a0001c0001t0006	2	NA18942.hp2 NA18948.hp1 NA18942.hp2 NA18948.hp1	5_prime_UTR_variant	MODIFIER	c.-79A>G c.-79A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	79		chr9	124012270
chr9:124012292	G G	T T	1	a0001c0001t0015 a0001c0001t0015	1	NA19068.hp2 NA19068.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-57G>T c.-57G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5			chr9	124012292
chr9:124012306	C C	G G	1	a0001c0002t0014 a0001c0002t0014	1	HG02630.hp2 HG02630.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-43C>G c.-43C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5			chr9	124012306
chr9:124012311	G G	T T	1	a0001c0006t0013 a0001c0006t0013	1	HG02735.hp2 HG02735.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-38G>T c.-38G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5			chr9	124012311
chr9:124032840	T T	TA TA	7	a0001c0001t0003 a0001c0001t0006 a0001c0001t0012 others(4): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0012 a0001c0001t0015 a0001c0002t0003 a0001c0007t0003 a0001c0009t0003	59	HG00423.hp2 HG00558.hp1 HG00673.hp2 others(56): Show HG00423.hp2 HG00558.hp1 HG00673.hp2 HG01071.hp1 HG01081.hp1 HG01123.hp1 HG01192.hp1 HG01255.hp1 HG01255.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01891.hp2 HG01928.hp1 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp2 HG02109.hp1 HG02135.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02293.hp2 HG02523.hp1 HG02809.hp1 HG03831.hp1 HG04115.hp1 NA18747.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18948.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp2 NA18974.hp1 NA18975.hp2 NA18990.hp2 NA19001.hp1 NA19004.hp1 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19012.hp1 NA19012.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp1 NA19066.hp1 NA19068.hp2 NA19081.hp1 NA19081.hp2 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.141dupA c.141dupA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	142	INFO_REALIGN_3_PRIME	chr9	124032840
chr9:124033116	C C	CA CA	6	a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 others(3): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 a0001c0002t0011 a0001c0003t0002 a0001c0004t0002	69	HG00408.hp2 HG00544.hp1 HG00597.hp1 others(66): Show HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG01099.hp2 HG01123.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01358.hp2 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG02015.hp1 HG02074.hp1 HG02129.hp1 HG02257.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02683.hp1 HG03239.hp2 HG03453.hp1 HG03540.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG04204.hp2 NA18906.hp2 NA18939.hp1 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18978.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp2 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.417dupA c.417dupA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	418	INFO_REALIGN_3_PRIME	chr9	124033116
chr9:124033125	C C	A A	1	a0001c0001t0012 a0001c0001t0012	1	NA18964.hp1 NA18964.hp1	3_prime_UTR_variant	MODIFIER	c.418C>A c.418C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	418		chr9	124033125
chr9:124033126	A A	C C	1	a0001c0001t0012 a0001c0001t0012	1	NA18964.hp1 NA18964.hp1	3_prime_UTR_variant	MODIFIER	c.419A>C c.419A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	419		chr9	124033126
chr9:124033171	GA GA	G G	2	a0001c0001t0005 a0001c0002t0005 a0001c0001t0005 a0001c0002t0005	11	HG02055.hp2 HG02071.hp1 HG02074.hp2 others(8): Show HG02055.hp2 HG02071.hp1 HG02074.hp2 HG02622.hp2 HG02630.hp1 HG02965.hp2 HG03516.hp2 HG06807.hp2 NA18940.hp1 NA18974.hp2 NA19084.hp2	3_prime_UTR_variant	MODIFIER	c.476delA c.476delA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	5/5	476	INFO_REALIGN_3_PRIME	chr9	124033171

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr9:124012581	C C	T T	2	a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0007t0003g0179	2	HG02109.hp1 HG02809.hp1 HG02109.hp1 HG02809.hp1	intron_variant	MODIFIER	c.120+113C>T c.120+113C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124012581
chr9:124012700	A A	G G	5	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0016g0178 a0001c0002t0001g0021	8	HG00639.hp2 HG02258.hp1 HG02486.hp1 others(5): Show HG00639.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.120+232A>G c.120+232A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124012700
chr9:124012827	G G	T T	1	a0001c0001t0016g0178 a0001c0001t0016g0178	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.120+359G>T c.120+359G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124012827
chr9:124012845	G G	A A	1	a0001c0002t0005g0048 a0001c0002t0005g0048	1	HG03516.hp2 HG03516.hp2	intron_variant	MODIFIER	c.120+377G>A c.120+377G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124012845
chr9:124012868	T T	C C	1	a0001c0002t0002g0049 a0001c0002t0002g0049	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.120+400T>C c.120+400T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124012868
chr9:124013209	G G	A A	2	a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0050 a0001c0002t0002g0051	2	NA18978.hp1 NA19087.hp2 NA18978.hp1 NA19087.hp2	intron_variant	MODIFIER	c.120+741G>A c.120+741G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013209
chr9:124013275	G G	A A	3	a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179	3	HG02109.hp1 HG02615.hp2 HG02809.hp1 HG02109.hp1 HG02615.hp2 HG02809.hp1	intron_variant	MODIFIER	c.121-686G>A c.121-686G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013275
chr9:124013276	A A	G G	1	a0001c0002t0002g0175 a0001c0002t0002g0175	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.121-685A>G c.121-685A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013276
chr9:124013357	C C	G G	1	a0001c0001t0001g0174 a0001c0001t0001g0174	1	HG02155.hp2 HG02155.hp2	intron_variant	MODIFIER	c.121-604C>G c.121-604C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013357
chr9:124013602	G G	T T	3	a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179	3	HG02109.hp1 HG02615.hp2 HG02809.hp1 HG02109.hp1 HG02615.hp2 HG02809.hp1	intron_variant	MODIFIER	c.121-359G>T c.121-359G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013602
chr9:124013663	G G	A A	2	a0001c0001t0016g0178 a0001c0002t0001g0021 a0001c0001t0016g0178 a0001c0002t0001g0021	4	HG00639.hp2 HG02559.hp1 HG02970.hp1 others(1): Show HG00639.hp2 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.121-298G>A c.121-298G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013663
chr9:124013743	G G	A A	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	NA18612.hp2 NA18612.hp2	intron_variant	MODIFIER	c.121-218G>A c.121-218G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013743
chr9:124013790	A A	AT AT	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.121-170dupT c.121-170dupT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4	INFO_REALIGN_3_PRIME	chr9	124013790
chr9:124013821	C C	G G	5	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0016g0178 a0001c0002t0001g0021	8	HG00639.hp2 HG02258.hp1 HG02486.hp1 others(5): Show HG00639.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.121-140C>G c.121-140C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013821
chr9:124013821	C C	T T	3	a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179	3	HG02109.hp1 HG02615.hp2 HG02809.hp1 HG02109.hp1 HG02615.hp2 HG02809.hp1	intron_variant	MODIFIER	c.121-140C>T c.121-140C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013821
chr9:124013822	G G	C C	13	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(10): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0002g0024 a0001c0001t0005g0061 a0001c0002t0003g0060	19	HG00735.hp2 HG01168.hp2 HG01891.hp2 others(16): Show HG00735.hp2 HG01168.hp2 HG01891.hp2 HG02040.hp2 HG02257.hp2 HG02280.hp1 HG03098.hp2 HG03453.hp1 HG06807.hp2 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.121-139G>C c.121-139G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013822
chr9:124013844	C C	T T	17	a0001c0001t0004g0004 a0001c0001t0004g0045 a0001c0001t0004g0046 others(14): Show a0001c0001t0004g0004 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0007g0165 a0001c0001t0007g0169 a0001c0002t0014g0161	34	HG00140.hp1 HG00609.hp2 HG00642.hp2 others(31): Show HG00140.hp1 HG00609.hp2 HG00642.hp2 HG01069.hp1 HG01106.hp1 HG01243.hp1 HG01358.hp1 HG01943.hp1 HG02109.hp2 HG02258.hp2 HG02273.hp1 HG02615.hp1 HG02630.hp2 HG02683.hp2 HG02738.hp2 HG02922.hp1 HG02965.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 NA18945.hp1 NA18956.hp2 NA19030.hp2 NA19066.hp2 NA19077.hp1 NA19080.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.121-117C>T c.121-117C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013844
chr9:124013866	G G	T T	3	a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179	3	HG02109.hp1 HG02615.hp2 HG02809.hp1 HG02109.hp1 HG02615.hp2 HG02809.hp1	intron_variant	MODIFIER	c.121-95G>T c.121-95G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/4		chr9	124013866
chr9:124014174	C C	G G	1	a0001c0002t0001g0044 a0001c0002t0001g0044	2	HG00423.hp1 HG02135.hp1 HG00423.hp1 HG02135.hp1	intron_variant	MODIFIER	c.323+11C>G c.323+11C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014174
chr9:124014218	G G	A A	9	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(6): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0001t0016g0178 a0001c0002t0001g0021 a0001c0002t0001g0052 a0001c0007t0003g0179	12	HG00639.hp2 HG02109.hp1 HG02258.hp1 others(9): Show HG00639.hp2 HG02109.hp1 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02809.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20129.hp1 NA20300.hp2	intron_variant	MODIFIER	c.323+55G>A c.323+55G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014218
chr9:124014283	C C	G G	1	a0001c0001t0004g0173 a0001c0001t0004g0173	1	HG00609.hp2 HG00609.hp2	intron_variant	MODIFIER	c.323+120C>G c.323+120C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014283
chr9:124014293	C C	T T	1	a0001c0002t0001g0043 a0001c0002t0001g0043	2	HG01167.hp2 HG01169.hp2 HG01167.hp2 HG01169.hp2	intron_variant	MODIFIER	c.323+130C>T c.323+130C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014293
chr9:124014294	C C	G G	2	a0001c0002t0002g0049 a0001c0002t0002g0159 a0001c0002t0002g0049 a0001c0002t0002g0159	2	HG00544.hp1 NA18956.hp1 HG00544.hp1 NA18956.hp1	intron_variant	MODIFIER	c.323+131C>G c.323+131C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014294
chr9:124014318	T T	A A	5	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0016g0178 a0001c0002t0001g0021	8	HG00639.hp2 HG02258.hp1 HG02486.hp1 others(5): Show HG00639.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.323+155T>A c.323+155T>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014318
chr9:124014357	T T	C C	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.323+194T>C c.323+194T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014357
chr9:124014446	G G	C C	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG01952.hp1 HG01952.hp1	intron_variant	MODIFIER	c.323+283G>C c.323+283G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014446
chr9:124014528	A A	C C	5	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0016g0178 a0001c0002t0001g0021	8	HG00639.hp2 HG02258.hp1 HG02486.hp1 others(5): Show HG00639.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.323+365A>C c.323+365A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014528
chr9:124014597	T T	C C	1	a0001c0001t0002g0063 a0001c0001t0002g0063	1	NA20129.hp1 NA20129.hp1	intron_variant	MODIFIER	c.323+434T>C c.323+434T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014597
chr9:124014675	T T	C C	3	a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0007t0003g0179	3	HG02109.hp1 HG02615.hp2 HG02809.hp1 HG02109.hp1 HG02615.hp2 HG02809.hp1	intron_variant	MODIFIER	c.324-447T>C c.324-447T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014675
chr9:124014686	G G	A A	1	a0001c0001t0003g0025 a0001c0001t0003g0025	2	HG01123.hp1 HG01255.hp1 HG01123.hp1 HG01255.hp1	intron_variant	MODIFIER	c.324-436G>A c.324-436G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014686
chr9:124014815	G G	C C	1	a0001c0001t0003g0065 a0001c0001t0003g0065	1	NA19081.hp1 NA19081.hp1	intron_variant	MODIFIER	c.324-307G>C c.324-307G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014815
chr9:124014927	A A	G G	3	a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158	3	HG01884.hp2 HG02572.hp2 NA18522.hp2 HG01884.hp2 HG02572.hp2 NA18522.hp2	intron_variant	MODIFIER	c.324-195A>G c.324-195A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014927
chr9:124014931	G G	C C	3	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067 a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067	4	HG02145.hp1 HG03139.hp2 HG03209.hp2 others(1): Show HG02145.hp1 HG03139.hp2 HG03209.hp2 HG03540.hp2	intron_variant	MODIFIER	c.324-191G>C c.324-191G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014931
chr9:124014985	C C	G G	1	a0001c0001t0001g0155 a0001c0001t0001g0155	1	NA19084.hp1 NA19084.hp1	intron_variant	MODIFIER	c.324-137C>G c.324-137C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014985
chr9:124014989	T T	C C	5	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0016g0178 a0001c0002t0001g0021	8	HG00639.hp2 HG02258.hp1 HG02486.hp1 others(5): Show HG00639.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.324-133T>C c.324-133T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014989
chr9:124014991	C C	G G	3	a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154	3	HG01168.hp1 HG01169.hp1 HG03710.hp1 HG01168.hp1 HG01169.hp1 HG03710.hp1	intron_variant	MODIFIER	c.324-131C>G c.324-131C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124014991
chr9:124015038	C C	G G	1	a0001c0001t0001g0042 a0001c0001t0001g0042	2	HG02818.hp1 HG03516.hp1 HG02818.hp1 HG03516.hp1	intron_variant	MODIFIER	c.324-84C>G c.324-84C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	2/4		chr9	124015038
chr9:124015551	C C	A A	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG03491.hp1 HG03491.hp1	intron_variant	MODIFIER	c.727+26C>A c.727+26C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015551
chr9:124015645	G G	A A	1	a0001c0001t0005g0069 a0001c0001t0005g0069	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.727+120G>A c.727+120G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015645
chr9:124015668	C C	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	HG01175.hp1 HG01175.hp1	intron_variant	MODIFIER	c.727+143C>A c.727+143C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015668
chr9:124015675	G G	A A	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.727+150G>A c.727+150G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015675
chr9:124015727	C C	T T	1	a0001c0001t0001g0151 a0001c0001t0001g0151	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.727+202C>T c.727+202C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015727
chr9:124015789	G G	T T	2	a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0002t0002g0175 a0001c0003t0002g0015	5	NA18952.hp1 NA18966.hp2 NA18988.hp2 others(2): Show NA18952.hp1 NA18966.hp2 NA18988.hp2 NA19082.hp1 NA19086.hp1	intron_variant	MODIFIER	c.727+264G>T c.727+264G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015789
chr9:124015856	A A	C C	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG03491.hp1 HG03491.hp1	intron_variant	MODIFIER	c.727+331A>C c.727+331A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015856
chr9:124015893	G G	A A	1	a0001c0001t0005g0072 a0001c0001t0005g0072	1	HG02071.hp1 HG02071.hp1	intron_variant	MODIFIER	c.727+368G>A c.727+368G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015893
chr9:124015897	A A	G G	1	a0001c0001t0003g0150 a0001c0001t0003g0150	1	HG01515.hp2 HG01515.hp2	intron_variant	MODIFIER	c.727+372A>G c.727+372A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124015897
chr9:124016012	A A	C C	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG00735.hp2 HG00735.hp2	intron_variant	MODIFIER	c.727+487A>C c.727+487A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016012
chr9:124016020	AGGCTTGG others(8): Show AGGCTTGGGGAACTCG	A A	1	a0001c0001t0016g0178 a0001c0001t0016g0178	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.727+510_727+524del others(15): Show c.727+510_727+524delGGGCTTGGGGAACTC	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr9	124016020
chr9:124016053	A A	G G	5	a0001c0001t0001g0020 a0001c0001t0001g0147 a0001c0001t0001g0148 others(2): Show a0001c0001t0001g0020 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063	7	HG02723.hp1 HG02896.hp2 HG02970.hp2 others(4): Show HG02723.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.727+528A>G c.727+528A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016053
chr9:124016054	A A	G G	1	a0001c0001t0016g0178 a0001c0001t0016g0178	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.727+529A>G c.727+529A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016054
chr9:124016086	G G	A A	1	a0001c0001t0004g0160 a0001c0001t0004g0160	1	HG02922.hp1 HG02922.hp1	intron_variant	MODIFIER	c.727+561G>A c.727+561G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016086
chr9:124016180	A A	G G	8	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 others(5): Show a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0003g0180 a0001c0001t0016g0178 a0001c0002t0001g0021 a0001c0002t0001g0052 a0001c0007t0003g0179	11	HG00639.hp2 HG02109.hp1 HG02258.hp1 others(8): Show HG00639.hp2 HG02109.hp1 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02809.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.727+655A>G c.727+655A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016180
chr9:124016217	C C	T T	1	a0001c0001t0001g0146 a0001c0001t0001g0146	1	HG01516.hp1 HG01516.hp1	intron_variant	MODIFIER	c.727+692C>T c.727+692C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016217
chr9:124016294	A A	T T	1	a0001c0001t0001g0145 a0001c0001t0001g0145	1	HG01099.hp1 HG01099.hp1	intron_variant	MODIFIER	c.727+769A>T c.727+769A>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016294
chr9:124016397	G G	C C	1	a0001c0001t0003g0016 a0001c0001t0003g0016	3	NA18962.hp2 NA19010.hp1 NA19081.hp2 NA18962.hp2 NA19010.hp1 NA19081.hp2	intron_variant	MODIFIER	c.727+872G>C c.727+872G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016397
chr9:124016427	G G	A A	3	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177	4	HG02258.hp1 HG02486.hp1 HG03195.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.727+902G>A c.727+902G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016427
chr9:124016542	A A	G G	47	a0001c0001t0001g0038 a0001c0002t0001g0002 a0001c0002t0001g0003 others(44): Show a0001c0001t0001g0038 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	130	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(127): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02970.hp1 HG03017.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.727+1017A>G c.727+1017A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016542
chr9:124016583	T T	G G	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.727+1058T>G c.727+1058T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016583
chr9:124016966	G G	A A	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	HG02717.hp2 HG02717.hp2	intron_variant	MODIFIER	c.727+1441G>A c.727+1441G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124016966
chr9:124017096	G G	C C	2	a0001c0001t0016g0178 a0001c0002t0014g0161 a0001c0001t0016g0178 a0001c0002t0014g0161	2	HG00639.hp2 HG02630.hp2 HG00639.hp2 HG02630.hp2	intron_variant	MODIFIER	c.727+1571G>C c.727+1571G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017096
chr9:124017167	G G	A A	1	a0001c0002t0001g0119 a0001c0002t0001g0119	1	HG02486.hp2 HG02486.hp2	intron_variant	MODIFIER	c.727+1642G>A c.727+1642G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017167
chr9:124017189	C C	T T	1	a0001c0002t0002g0144 a0001c0002t0002g0144	1	HG01192.hp2 HG01192.hp2	intron_variant	MODIFIER	c.727+1664C>T c.727+1664C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017189
chr9:124017215	T T	C C	77	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(74): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0075 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0003g0180 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	168	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(165): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02040.hp2 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02257.hp2 HG02273.hp2 HG02280.hp1 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.727+1690T>C c.727+1690T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017215
chr9:124017354	C C	G G	2	a0001c0001t0016g0178 a0001c0002t0011g0077 a0001c0001t0016g0178 a0001c0002t0011g0077	2	HG00639.hp2 HG03704.hp2 HG00639.hp2 HG03704.hp2	intron_variant	MODIFIER	c.727+1829C>G c.727+1829C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017354
chr9:124017438	G G	T T	1	a0001c0001t0016g0178 a0001c0001t0016g0178	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.727+1913G>T c.727+1913G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017438
chr9:124017467	C C	A A	2	a0001c0001t0002g0063 a0001c0001t0016g0178 a0001c0001t0002g0063 a0001c0001t0016g0178	2	HG00639.hp2 NA20129.hp1 HG00639.hp2 NA20129.hp1	intron_variant	MODIFIER	c.727+1942C>A c.727+1942C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017467
chr9:124017536	C C	T T	1	a0001c0002t0011g0077 a0001c0002t0011g0077	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.727+2011C>T c.727+2011C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017536
chr9:124017590	C C	T T	1	a0001c0002t0001g0143 a0001c0002t0001g0143	1	NA18982.hp1 NA18982.hp1	intron_variant	MODIFIER	c.727+2065C>T c.727+2065C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017590
chr9:124017668	C C	T T	2	a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0007t0003g0179	2	HG02109.hp1 HG02809.hp1 HG02109.hp1 HG02809.hp1	intron_variant	MODIFIER	c.727+2143C>T c.727+2143C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017668
chr9:124017769	T T	C C	1	a0001c0001t0001g0078 a0001c0001t0001g0078	1	HG03704.hp1 HG03704.hp1	intron_variant	MODIFIER	c.727+2244T>C c.727+2244T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017769
chr9:124017888	C C	T T	44	a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 others(41): Show a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	123	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(120): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.727+2363C>T c.727+2363C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017888
chr9:124017895	A A	C C	4	a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0002t0003g0060 others(1): Show a0001c0001t0003g0180 a0001c0002t0001g0052 a0001c0002t0003g0060 a0001c0007t0003g0179	4	HG01891.hp2 HG02109.hp1 HG02615.hp2 others(1): Show HG01891.hp2 HG02109.hp1 HG02615.hp2 HG02809.hp1	intron_variant	MODIFIER	c.727+2370A>C c.727+2370A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124017895
chr9:124018009	C C	T T	1	a0001c0001t0016g0178 a0001c0001t0016g0178	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.727+2484C>T c.727+2484C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018009
chr9:124018272	G G	GA GA	6	a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0074 others(3): Show a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0074 a0001c0001t0001g0176 a0001c0001t0003g0079 a0001c0001t0003g0080	8	HG02258.hp1 HG02647.hp1 HG02647.hp2 others(5): Show HG02258.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02886.hp1 HG03098.hp1 NA18941.hp2 NA19001.hp1	intron_variant	MODIFIER	c.727+2761dupA c.727+2761dupA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr9	124018272
chr9:124018272	GA GA	G G	80	a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0038 others(77): Show a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0066 a0001c0001t0001g0117 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0004g0004 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0160 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0007g0165 a0001c0001t0007g0169 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	182	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(179): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19066.hp2 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp2 NA20300.hp1 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.727+2761delA c.727+2761delA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr9	124018272
chr9:124018286	AG AG	A A	11	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(8): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0002g0024	17	HG00735.hp2 HG01168.hp2 HG02040.hp2 others(14): Show HG00735.hp2 HG01168.hp2 HG02040.hp2 HG02257.hp2 HG02280.hp1 HG03098.hp2 HG03453.hp1 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.727+2763delG c.727+2763delG	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr9	124018286
chr9:124018435	TC TC	T T	5	a0001c0001t0001g0116 a0001c0002t0002g0175 a0001c0003t0002g0015 others(2): Show a0001c0001t0001g0116 a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142	10	NA18952.hp1 NA18966.hp2 NA18970.hp2 others(7): Show NA18952.hp1 NA18966.hp2 NA18970.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp2 NA19006.hp2 NA19075.hp1 NA19082.hp1 NA19086.hp1	intron_variant	MODIFIER	c.728-2659delC c.728-2659delC	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr9	124018435
chr9:124018441	G G	T T	4	a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 others(1): Show a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142	9	NA18952.hp1 NA18966.hp2 NA18970.hp2 others(6): Show NA18952.hp1 NA18966.hp2 NA18970.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp2 NA19006.hp2 NA19082.hp1 NA19086.hp1	intron_variant	MODIFIER	c.728-2658G>T c.728-2658G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018441
chr9:124018456	C C	A A	1	a0001c0001t0001g0081 a0001c0001t0001g0081	1	NA18965.hp1 NA18965.hp1	intron_variant	MODIFIER	c.728-2643C>A c.728-2643C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018456
chr9:124018548	C C	T T	1	a0001c0002t0003g0060 a0001c0002t0003g0060	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.728-2551C>T c.728-2551C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018548
chr9:124018553	A A	G G	20	a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0118 others(17): Show a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0118 a0001c0001t0003g0115 a0001c0001t0004g0004 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0007g0165 a0001c0001t0007g0169	37	HG00140.hp1 HG00609.hp2 HG00642.hp2 others(34): Show HG00140.hp1 HG00609.hp2 HG00642.hp2 HG01069.hp1 HG01081.hp1 HG01106.hp1 HG01243.hp1 HG01358.hp1 HG01943.hp1 HG01975.hp1 HG02109.hp2 HG02258.hp2 HG02273.hp1 HG02572.hp2 HG02615.hp1 HG02683.hp2 HG02738.hp2 HG02922.hp1 HG02965.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 NA18522.hp2 NA18945.hp1 NA18956.hp2 NA19030.hp2 NA19066.hp2 NA19077.hp1 NA19080.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.728-2546A>G c.728-2546A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018553
chr9:124018574	T T	A A	1	a0001c0001t0003g0030 a0001c0001t0003g0030	2	HG01071.hp1 HG01192.hp1 HG01071.hp1 HG01192.hp1	intron_variant	MODIFIER	c.728-2525T>A c.728-2525T>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018574
chr9:124018598	G G	A A	1	a0001c0002t0003g0060 a0001c0002t0003g0060	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.728-2501G>A c.728-2501G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018598
chr9:124018633	G G	A A	4	a0001c0001t0001g0022 a0001c0001t0001g0054 a0001c0001t0001g0055 others(1): Show a0001c0001t0001g0022 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0062	5	HG00735.hp2 HG01168.hp2 HG02257.hp2 others(2): Show HG00735.hp2 HG01168.hp2 HG02257.hp2 NA18968.hp1 NA18989.hp1	intron_variant	MODIFIER	c.728-2466G>A c.728-2466G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018633
chr9:124018645	G G	T T	3	a0001c0001t0001g0008 a0001c0001t0001g0151 a0001c0001t0002g0114 a0001c0001t0001g0008 a0001c0001t0001g0151 a0001c0001t0002g0114	8	HG00140.hp2 HG00639.hp1 HG00735.hp1 others(5): Show HG00140.hp2 HG00639.hp1 HG00735.hp1 HG01069.hp2 HG01071.hp2 HG02257.hp1 HG02735.hp1 HG03239.hp1	intron_variant	MODIFIER	c.728-2454G>T c.728-2454G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018645
chr9:124018877	C C	T T	1	a0001c0003t0002g0142 a0001c0003t0002g0142	1	NA19006.hp2 NA19006.hp2	intron_variant	MODIFIER	c.728-2222C>T c.728-2222C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018877
chr9:124018923	C C	G G	3	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067 a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067	4	HG02145.hp1 HG03139.hp2 HG03209.hp2 others(1): Show HG02145.hp1 HG03139.hp2 HG03209.hp2 HG03540.hp2	intron_variant	MODIFIER	c.728-2176C>G c.728-2176C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124018923
chr9:124019052	G G	A A	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.728-2047G>A c.728-2047G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019052
chr9:124019102	G G	A A	3	a0001c0001t0001g0009 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0009 a0001c0001t0001g0056 a0001c0001t0001g0057	6	NA18965.hp2 NA18967.hp2 NA18977.hp1 others(3): Show NA18965.hp2 NA18967.hp2 NA18977.hp1 NA18983.hp2 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.728-1997G>A c.728-1997G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019102
chr9:124019242	A A	G G	3	a0001c0002t0001g0052 a0001c0002t0003g0060 a0001c0002t0011g0077 a0001c0002t0001g0052 a0001c0002t0003g0060 a0001c0002t0011g0077	3	HG01891.hp2 HG02615.hp2 HG03704.hp2 HG01891.hp2 HG02615.hp2 HG03704.hp2	intron_variant	MODIFIER	c.728-1857A>G c.728-1857A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019242
chr9:124019485	A A	G G	2	a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0007t0003g0179	2	HG02109.hp1 HG02809.hp1 HG02109.hp1 HG02809.hp1	intron_variant	MODIFIER	c.728-1614A>G c.728-1614A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019485
chr9:124019557	T T	C C	5	a0001c0001t0001g0010 a0001c0001t0001g0031 a0001c0001t0003g0010 others(2): Show a0001c0001t0001g0010 a0001c0001t0001g0031 a0001c0001t0003g0010 a0001c0001t0003g0016 a0001c0001t0003g0031	9	HG02027.hp2 HG02071.hp2 NA18962.hp2 others(6): Show HG02027.hp2 HG02071.hp2 NA18962.hp2 NA19010.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19081.hp2 NA19085.hp1	intron_variant	MODIFIER	c.728-1542T>C c.728-1542T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019557
chr9:124019593	A A	G G	1	a0001c0002t0011g0077 a0001c0002t0011g0077	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.728-1506A>G c.728-1506A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019593
chr9:124019657	A A	G G	3	a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179	3	HG02109.hp1 HG02809.hp1 NA20129.hp1 HG02109.hp1 HG02809.hp1 NA20129.hp1	intron_variant	MODIFIER	c.728-1442A>G c.728-1442A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019657
chr9:124019735	C C	T T	2	a0001c0002t0001g0052 a0001c0002t0003g0060 a0001c0002t0001g0052 a0001c0002t0003g0060	2	HG01891.hp2 HG02615.hp2 HG01891.hp2 HG02615.hp2	intron_variant	MODIFIER	c.728-1364C>T c.728-1364C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019735
chr9:124019851	G G	A A	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	HG04204.hp1 HG04204.hp1	intron_variant	MODIFIER	c.728-1248G>A c.728-1248G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019851
chr9:124019882	C C	A A	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.728-1217C>A c.728-1217C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124019882
chr9:124020024	C C	T T	1	a0001c0001t0001g0113 a0001c0001t0001g0113	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.728-1075C>T c.728-1075C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020024
chr9:124020033	G G	A A	3	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067 a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067	4	HG02145.hp1 HG03139.hp2 HG03209.hp2 others(1): Show HG02145.hp1 HG03139.hp2 HG03209.hp2 HG03540.hp2	intron_variant	MODIFIER	c.728-1066G>A c.728-1066G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020033
chr9:124020258	T T	C C	1	a0001c0001t0016g0178 a0001c0001t0016g0178	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.728-841T>C c.728-841T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020258
chr9:124020394	G G	T T	1	a0001c0001t0001g0112 a0001c0001t0001g0112	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.728-705G>T c.728-705G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020394
chr9:124020563	C C	G G	3	a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158	3	HG01884.hp2 HG02572.hp2 NA18522.hp2 HG01884.hp2 HG02572.hp2 NA18522.hp2	intron_variant	MODIFIER	c.728-536C>G c.728-536C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020563
chr9:124020569	G G	A A	1	a0001c0002t0003g0060 a0001c0002t0003g0060	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.728-530G>A c.728-530G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020569
chr9:124020606	C C	T T	1	a0001c0002t0003g0060 a0001c0002t0003g0060	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.728-493C>T c.728-493C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020606
chr9:124020739	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG03195.hp1 HG03486.hp1 HG03195.hp1 HG03486.hp1	intron_variant	MODIFIER	c.728-360C>T c.728-360C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020739
chr9:124020793	T T	TTGC TTGC	5	a0001c0001t0001g0081 a0001c0001t0002g0063 a0001c0001t0003g0180 others(2): Show a0001c0001t0001g0081 a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0001t0016g0178 a0001c0007t0003g0179	5	HG00639.hp2 HG02109.hp1 HG02809.hp1 others(2): Show HG00639.hp2 HG02109.hp1 HG02809.hp1 NA18965.hp1 NA20129.hp1	intron_variant	MODIFIER	c.728-286_728-284dup others(3): Show c.728-286_728-284dupGCT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr9	124020793
chr9:124020816	A A	G G	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG03195.hp1 HG03486.hp1 HG03195.hp1 HG03486.hp1	intron_variant	MODIFIER	c.728-283A>G c.728-283A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020816
chr9:124020825	C C	T T	102	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(99): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0004 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0005g0061 a0001c0001t0007g0165 a0001c0001t0007g0169 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	211	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(208): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02040.hp2 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19066.hp2 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.728-274C>T c.728-274C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124020825
chr9:124021091	C C	T T	1	a0001c0002t0001g0141 a0001c0002t0001g0141	1	NA19058.hp2 NA19058.hp2	splice_region_variant&intron_variant	LOW	c.728-8C>T c.728-8C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	3/4		chr9	124021091
chr9:124021358	A A	G G	1	a0001c0002t0001g0140 a0001c0002t0001g0140	1	HG00280.hp2 HG00280.hp2	intron_variant	MODIFIER	c.933+54A>G c.933+54A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021358
chr9:124021541	C C	T T	14	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(11): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0002g0024 a0001c0001t0002g0067	21	HG00735.hp2 HG01168.hp2 HG02040.hp2 others(18): Show HG00735.hp2 HG01168.hp2 HG02040.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03540.hp2 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.933+237C>T c.933+237C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021541
chr9:124021557	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG03195.hp1 HG03486.hp1 HG03195.hp1 HG03486.hp1	intron_variant	MODIFIER	c.933+253C>T c.933+253C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021557
chr9:124021568	C C	T T	45	a0001c0001t0002g0118 a0001c0002t0001g0002 a0001c0002t0001g0003 others(42): Show a0001c0001t0002g0118 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	124	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(121): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+264C>T c.933+264C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021568
chr9:124021573	G G	A A	1	a0001c0002t0001g0039 a0001c0002t0001g0039	2	HG02523.hp2 NA18612.hp1 HG02523.hp2 NA18612.hp1	intron_variant	MODIFIER	c.933+269G>A c.933+269G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021573
chr9:124021708	C C	T T	1	a0001c0002t0005g0076 a0001c0002t0005g0076	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.933+404C>T c.933+404C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021708
chr9:124021886	G G	A A	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.933+582G>A c.933+582G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124021886
chr9:124022008	T T	A A	60	a0001c0001t0001g0038 a0001c0001t0001g0156 a0001c0001t0001g0157 others(57): Show a0001c0001t0001g0038 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	143	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(140): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.933+704T>A c.933+704T>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022008
chr9:124022186	G G	A A	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.933+882G>A c.933+882G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022186
chr9:124022215	T T	G G	16	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(13): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0002g0024 a0001c0001t0002g0067 a0001c0002t0001g0052 a0001c0002t0011g0077	23	HG00735.hp2 HG01168.hp2 HG02040.hp2 others(20): Show HG00735.hp2 HG01168.hp2 HG02040.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp1 HG02615.hp2 HG03098.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03540.hp2 HG03704.hp2 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.933+911T>G c.933+911T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022215
chr9:124022256	T T	A A	1	a0001c0001t0001g0083 a0001c0001t0001g0083	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.933+952T>A c.933+952T>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022256
chr9:124022284	C C	T T	3	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177	4	HG02258.hp1 HG02486.hp1 HG03195.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.933+980C>T c.933+980C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022284
chr9:124022316	T T	C C	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG03195.hp1 HG03486.hp1 HG03195.hp1 HG03486.hp1	intron_variant	MODIFIER	c.933+1012T>C c.933+1012T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022316
chr9:124022415	T T	C C	1	a0001c0002t0001g0121 a0001c0002t0001g0121	1	HG02132.hp2 HG02132.hp2	intron_variant	MODIFIER	c.933+1111T>C c.933+1111T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022415
chr9:124022462	A A	G G	1	a0001c0002t0001g0139 a0001c0002t0001g0139	1	HG01516.hp2 HG01516.hp2	intron_variant	MODIFIER	c.933+1158A>G c.933+1158A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022462
chr9:124022879	G G	A A	1	a0001c0001t0001g0084 a0001c0001t0001g0084	1	NA18906.hp1 NA18906.hp1	intron_variant	MODIFIER	c.933+1575G>A c.933+1575G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124022879
chr9:124023009	A A	G G	83	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(80): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0005g0061 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	174	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(171): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2	intron_variant	MODIFIER	c.933+1705A>G c.933+1705A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023009
chr9:124023012	G G	T T	83	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(80): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0005g0061 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	174	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(171): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2	intron_variant	MODIFIER	c.933+1708G>T c.933+1708G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023012
chr9:124023058	C C	T T	1	a0001c0001t0002g0063 a0001c0001t0002g0063	1	NA20129.hp1 NA20129.hp1	intron_variant	MODIFIER	c.933+1754C>T c.933+1754C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023058
chr9:124023246	T T	C C	18	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(15): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0067 a0001c0001t0016g0178	27	HG00639.hp2 HG00735.hp2 HG01168.hp2 others(24): Show HG00639.hp2 HG00735.hp2 HG01168.hp2 HG02040.hp2 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02486.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03486.hp1 HG03540.hp2 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2 NA20300.hp2	intron_variant	MODIFIER	c.933+1942T>C c.933+1942T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023246
chr9:124023248	GGAA GGAA	G G	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.933+1954_933+1956d others(5): Show c.933+1954_933+1956delGAA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124023248
chr9:124023314	A A	AAAT AAAT	6	a0001c0001t0001g0038 a0001c0001t0001g0156 a0001c0001t0001g0157 others(3): Show a0001c0001t0001g0038 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0002t0001g0052 a0001c0002t0011g0077	7	HG01884.hp2 HG02572.hp2 HG02615.hp2 others(4): Show HG01884.hp2 HG02572.hp2 HG02615.hp2 HG03195.hp1 HG03486.hp1 HG03704.hp2 NA18522.hp2	intron_variant	MODIFIER	c.933+2029_933+2031d others(5): Show c.933+2029_933+2031dupAAT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124023314
chr9:124023379	C C	G G	6	a0001c0001t0001g0038 a0001c0001t0001g0156 a0001c0001t0001g0157 others(3): Show a0001c0001t0001g0038 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0002t0001g0052 a0001c0002t0011g0077	7	HG01884.hp2 HG02572.hp2 HG02615.hp2 others(4): Show HG01884.hp2 HG02572.hp2 HG02615.hp2 HG03195.hp1 HG03486.hp1 HG03704.hp2 NA18522.hp2	intron_variant	MODIFIER	c.933+2075C>G c.933+2075C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023379
chr9:124023564	G G	A A	2	a0001c0001t0001g0081 a0001c0001t0001g0085 a0001c0001t0001g0081 a0001c0001t0001g0085	2	NA18965.hp1 NA19058.hp1 NA18965.hp1 NA19058.hp1	intron_variant	MODIFIER	c.933+2260G>A c.933+2260G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023564
chr9:124023596	T T	A A	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.933+2292T>A c.933+2292T>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023596
chr9:124023747	C C	T T	1	a0001c0002t0001g0138 a0001c0002t0001g0138	1	NA18984.hp2 NA18984.hp2	intron_variant	MODIFIER	c.933+2443C>T c.933+2443C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023747
chr9:124023835	G G	A A	1	a0001c0002t0002g0122 a0001c0002t0002g0122	1	HG01123.hp2 HG01123.hp2	intron_variant	MODIFIER	c.933+2531G>A c.933+2531G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023835
chr9:124023851	C C	A A	2	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0001g0026 a0001c0001t0001g0066	3	HG02145.hp1 HG03139.hp2 HG03209.hp2 HG02145.hp1 HG03139.hp2 HG03209.hp2	intron_variant	MODIFIER	c.933+2547C>A c.933+2547C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023851
chr9:124023879	G G	A A	1	a0001c0002t0002g0123 a0001c0002t0002g0123	1	NA18983.hp1 NA18983.hp1	intron_variant	MODIFIER	c.933+2575G>A c.933+2575G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023879
chr9:124023884	G G	A A	1	a0001c0001t0001g0022 a0001c0001t0001g0022	2	NA18968.hp1 NA18989.hp1 NA18968.hp1 NA18989.hp1	intron_variant	MODIFIER	c.933+2580G>A c.933+2580G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023884
chr9:124023937	G G	T T	9	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(6): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0002t0001g0027 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076	11	HG01891.hp2 HG02630.hp1 HG02723.hp1 others(8): Show HG01891.hp2 HG02630.hp1 HG02723.hp1 HG02896.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03516.hp2 NA18522.hp1	intron_variant	MODIFIER	c.933+2633G>T c.933+2633G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124023937
chr9:124024213	T T	A A	1	a0001c0001t0001g0086 a0001c0001t0001g0086	1	NA19086.hp2 NA19086.hp2	intron_variant	MODIFIER	c.933+2909T>A c.933+2909T>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024213
chr9:124024221	G G	A A	1	a0001c0001t0001g0087 a0001c0001t0001g0087	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.933+2917G>A c.933+2917G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024221
chr9:124024427	G G	A A	1	a0001c0001t0001g0086 a0001c0001t0001g0086	1	NA19086.hp2 NA19086.hp2	intron_variant	MODIFIER	c.933+3123G>A c.933+3123G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024427
chr9:124024454	C C	G G	57	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(54): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	141	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(138): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+3150C>G c.933+3150C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024454
chr9:124024561	G G	A A	1	a0001c0001t0003g0088 a0001c0001t0003g0088	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.933+3257G>A c.933+3257G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024561
chr9:124024562	G G	A A	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.933+3258G>A c.933+3258G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024562
chr9:124024602	A A	T T	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG03139.hp2 HG03139.hp2	intron_variant	MODIFIER	c.933+3298A>T c.933+3298A>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024602
chr9:124024639	A A	C C	53	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 others(50): Show a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	137	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(134): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+3335A>C c.933+3335A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024639
chr9:124024640	G G	A A	1	a0001c0002t0001g0124 a0001c0002t0001g0124	1	NA19011.hp2 NA19011.hp2	intron_variant	MODIFIER	c.933+3336G>A c.933+3336G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024640
chr9:124024727	A A	G G	55	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 others(52): Show a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	139	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(136): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.933+3423A>G c.933+3423A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024727
chr9:124024788	A A	G G	200	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 others(197): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0001 a0001c0001t0002g0024 a0001c0001t0002g0035 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0104 a0001c0001t0002g0114 a0001c0001t0002g0118 a0001c0001t0003g0001 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0010 a0001c0001t0003g0016 a0001c0001t0003g0018 a0001c0001t0003g0025 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0034 a0001c0001t0003g0065 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0091 a0001c0001t0003g0093 a0001c0001t0003g0101 a0001c0001t0003g0103 a0001c0001t0003g0105 a0001c0001t0003g0111 a0001c0001t0003g0115 a0001c0001t0003g0150 a0001c0001t0003g0180 a0001c0001t0004g0004 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0005g0001 a0001c0001t0005g0037 a0001c0001t0005g0061 a0001c0001t0005g0069 a0001c0001t0005g0072 a0001c0001t0006g0005 a0001c0001t0007g0165 a0001c0001t0007g0169 a0001c0001t0008g0001 a0001c0001t0009g0001 a0001c0001t0010g0097 a0001c0001t0012g0001 a0001c0001t0015g0001 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0006t0013g0001 a0001c0007t0003g0179 a0001c0008t0001g0002 a0001c0009t0003g0005 a0001c0010t0001g0090 a0002c0005t0001g0012	398	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(395): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.933+3484A>G c.933+3484A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024788
chr9:124024899	C C	T T	3	a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158	3	HG01884.hp2 HG02572.hp2 NA18522.hp2 HG01884.hp2 HG02572.hp2 NA18522.hp2	intron_variant	MODIFIER	c.933+3595C>T c.933+3595C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024899
chr9:124024952	A A	G G	3	a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179	3	HG02109.hp1 HG02809.hp1 NA20129.hp1 HG02109.hp1 HG02809.hp1 NA20129.hp1	intron_variant	MODIFIER	c.933+3648A>G c.933+3648A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024952
chr9:124024996	G G	A A	1	a0001c0001t0003g0089 a0001c0001t0003g0089	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.933+3692G>A c.933+3692G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124024996
chr9:124025164	C C	T T	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.933+3860C>T c.933+3860C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025164
chr9:124025177	G G	A A	11	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(8): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0002g0024 a0001c0001t0016g0178	17	HG00639.hp2 HG00735.hp2 HG01168.hp2 others(14): Show HG00639.hp2 HG00735.hp2 HG01168.hp2 HG02040.hp2 HG02257.hp2 HG02280.hp1 HG03453.hp1 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.933+3873G>A c.933+3873G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025177
chr9:124025203	C C	T T	2	a0001c0001t0001g0073 a0001c0001t0005g0061 a0001c0001t0001g0073 a0001c0001t0005g0061	2	HG02145.hp2 HG06807.hp2 HG02145.hp2 HG06807.hp2	intron_variant	MODIFIER	c.933+3899C>T c.933+3899C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025203
chr9:124025218	G G	A A	1	a0001c0010t0001g0090 a0001c0010t0001g0090	1	NA20752.hp2 NA20752.hp2	intron_variant	MODIFIER	c.933+3914G>A c.933+3914G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025218
chr9:124025311	T T	G G	4	a0001c0002t0001g0027 a0001c0002t0005g0027 a0001c0002t0005g0048 others(1): Show a0001c0002t0001g0027 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076	4	HG02630.hp1 HG02965.hp2 HG03516.hp2 others(1): Show HG02630.hp1 HG02965.hp2 HG03516.hp2 NA18522.hp1	intron_variant	MODIFIER	c.933+4007T>G c.933+4007T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025311
chr9:124025358	G G	A A	1	a0001c0001t0003g0091 a0001c0001t0003g0091	1	NA19064.hp1 NA19064.hp1	intron_variant	MODIFIER	c.933+4054G>A c.933+4054G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025358
chr9:124025379	T T	G G	1	a0001c0001t0001g0092 a0001c0001t0001g0092	1	HG03710.hp2 HG03710.hp2	intron_variant	MODIFIER	c.933+4075T>G c.933+4075T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025379
chr9:124025385	G G	C C	52	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 others(49): Show a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	136	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(133): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+4081G>C c.933+4081G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025385
chr9:124025390	A A	G G	1	a0001c0001t0003g0111 a0001c0001t0003g0111	1	NA19012.hp1 NA19012.hp1	intron_variant	MODIFIER	c.933+4086A>G c.933+4086A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025390
chr9:124025427	T T	C C	93	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(90): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0093 a0001c0001t0003g0111 a0001c0001t0003g0115 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0001t0006g0005 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002 a0001c0009t0003g0005 a0002c0005t0001g0012	199	HG00280.hp1 HG00280.hp2 HG00408.hp1 others(196): Show HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18999.hp2 NA19001.hp2 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2	intron_variant	MODIFIER	c.933+4123T>C c.933+4123T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025427
chr9:124025440	C C	CA CA	16	a0001c0001t0001g0031 a0001c0001t0001g0054 a0001c0001t0001g0055 others(13): Show a0001c0001t0001g0031 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0075 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0116 a0001c0001t0001g0157 a0001c0001t0003g0031 a0001c0001t0003g0093 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0007g0165 a0001c0002t0001g0052	16	HG00642.hp2 HG01168.hp2 HG02027.hp2 others(13): Show HG00642.hp2 HG01168.hp2 HG02027.hp2 HG02165.hp1 HG02257.hp2 HG02572.hp1 HG02615.hp2 HG03471.hp1 HG03471.hp2 NA18522.hp2 NA18956.hp2 NA18977.hp1 NA18978.hp2 NA19067.hp2 NA19075.hp1 NA19080.hp2	intron_variant	MODIFIER	c.933+4159dupA c.933+4159dupA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124025440
chr9:124025440	CA CA	C C	10	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0001g0081 others(7): Show a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0001g0081 a0001c0001t0001g0149 a0001c0001t0002g0067 a0001c0001t0003g0080 a0001c0001t0003g0180 a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0007t0003g0179	13	HG02109.hp1 HG02145.hp1 HG02559.hp1 others(10): Show HG02109.hp1 HG02145.hp1 HG02559.hp1 HG02630.hp2 HG02809.hp1 HG02970.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03540.hp2 NA18941.hp2 NA18965.hp1	intron_variant	MODIFIER	c.933+4159delA c.933+4159delA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124025440
chr9:124025440	CAAAAAAA others(4): Show CAAAAAAAAAAA	C C	2	a0001c0001t0002g0118 a0001c0002t0001g0139 a0001c0001t0002g0118 a0001c0002t0001g0139	2	HG01516.hp2 HG01975.hp1 HG01516.hp2 HG01975.hp1	intron_variant	MODIFIER	c.933+4149_933+4159d others(13): Show c.933+4149_933+4159delAAAAAAAAAAA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124025440
chr9:124025440	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	51	a0001c0001t0001g0059 a0001c0001t0004g0172 a0001c0002t0001g0002 others(48): Show a0001c0001t0001g0059 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	131	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(128): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+4148_933+4159d others(14): Show c.933+4148_933+4159delAAAAAAAAAAAA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124025440
chr9:124025519	T T	C C	1	a0001c0002t0001g0125 a0001c0002t0001g0125	1	HG01981.hp1 HG01981.hp1	intron_variant	MODIFIER	c.933+4215T>C c.933+4215T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025519
chr9:124025860	C C	T T	2	a0001c0001t0001g0095 a0001c0001t0001g0110 a0001c0001t0001g0095 a0001c0001t0001g0110	2	NA18967.hp1 NA18978.hp2 NA18967.hp1 NA18978.hp2	intron_variant	MODIFIER	c.933+4556C>T c.933+4556C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025860
chr9:124025871	G G	C C	1	a0001c0002t0001g0126 a0001c0002t0001g0126	1	NA19009.hp1 NA19009.hp1	intron_variant	MODIFIER	c.933+4567G>C c.933+4567G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124025871
chr9:124026014	G G	T T	3	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177	4	HG02258.hp1 HG02486.hp1 HG03195.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.933+4710G>T c.933+4710G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026014
chr9:124026015	G G	A A	53	a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 others(50): Show a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	133	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(130): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+4711G>A c.933+4711G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026015
chr9:124026033	C C	T T	94	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(91): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0075 a0001c0001t0001g0109 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0093 a0001c0001t0003g0111 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0001t0006g0005 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002 a0001c0009t0003g0005 a0002c0005t0001g0012	200	HG00280.hp1 HG00280.hp2 HG00408.hp1 others(197): Show HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18999.hp2 NA19001.hp2 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2	intron_variant	MODIFIER	c.933+4729C>T c.933+4729C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026033
chr9:124026122	G G	A A	6	a0001c0001t0001g0059 a0001c0002t0001g0027 a0001c0002t0003g0060 others(3): Show a0001c0001t0001g0059 a0001c0002t0001g0027 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076	6	HG01891.hp2 HG02630.hp1 HG02965.hp2 others(3): Show HG01891.hp2 HG02630.hp1 HG02965.hp2 HG03098.hp2 HG03516.hp2 NA18522.hp1	intron_variant	MODIFIER	c.933+4818G>A c.933+4818G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026122
chr9:124026190	G G	A A	53	a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 others(50): Show a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	133	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(130): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+4886G>A c.933+4886G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026190
chr9:124026223	C C	T T	9	a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 others(6): Show a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0093 a0001c0001t0003g0111 a0001c0001t0006g0005 a0001c0002t0011g0077 a0001c0009t0003g0005 a0002c0005t0001g0012	22	HG00408.hp1 HG01123.hp1 HG01255.hp1 others(19): Show HG00408.hp1 HG01123.hp1 HG01255.hp1 HG01255.hp2 HG01496.hp2 HG01928.hp1 HG01993.hp2 HG02027.hp1 HG02165.hp1 HG02293.hp2 HG03704.hp2 NA18747.hp2 NA18942.hp2 NA18948.hp1 NA18974.hp1 NA18986.hp2 NA18990.hp1 NA19001.hp2 NA19006.hp1 NA19012.hp1 NA19060.hp2 NA19063.hp1	intron_variant	MODIFIER	c.933+4919C>T c.933+4919C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026223
chr9:124026284	C C	A A	1	a0001c0001t0004g0163 a0001c0001t0004g0163	1	HG00642.hp2 HG00642.hp2	intron_variant	MODIFIER	c.933+4980C>A c.933+4980C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026284
chr9:124026460	C C	CA CA	7	a0001c0001t0001g0020 a0001c0001t0001g0116 a0001c0001t0001g0148 others(4): Show a0001c0001t0001g0020 a0001c0001t0001g0116 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0004g0045 a0001c0002t0001g0021 a0001c0002t0014g0161	12	HG02559.hp1 HG02630.hp2 HG02683.hp2 others(9): Show HG02559.hp1 HG02630.hp2 HG02683.hp2 HG02723.hp1 HG02896.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03130.hp1 HG03688.hp1 NA19075.hp1	intron_variant	MODIFIER	c.933+5172dupA c.933+5172dupA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124026460
chr9:124026530	G G	A A	3	a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179	3	HG02109.hp1 HG02809.hp1 NA20129.hp1 HG02109.hp1 HG02809.hp1 NA20129.hp1	intron_variant	MODIFIER	c.933+5226G>A c.933+5226G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026530
chr9:124026557	C C	T T	61	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(58): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	145	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(142): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.933+5253C>T c.933+5253C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026557
chr9:124026597	C C	A A	53	a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 others(50): Show a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	133	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(130): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.933+5293C>A c.933+5293C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026597
chr9:124026631	G G	A A	90	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(87): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0109 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0093 a0001c0001t0003g0111 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0001t0006g0005 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002 a0001c0009t0003g0005 a0002c0005t0001g0012	195	HG00280.hp1 HG00280.hp2 HG00408.hp1 others(192): Show HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18999.hp2 NA19001.hp2 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.933+5327G>A c.933+5327G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026631
chr9:124026656	A A	G G	55	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 others(52): Show a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	139	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(136): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.933+5352A>G c.933+5352A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026656
chr9:124026721	C C	T T	58	a0001c0001t0001g0059 a0001c0001t0001g0073 a0001c0001t0002g0063 others(55): Show a0001c0001t0001g0059 a0001c0001t0001g0073 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0001t0005g0061 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	138	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(135): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.933+5417C>T c.933+5417C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026721
chr9:124026739	A A	G G	3	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149	5	HG02723.hp1 HG02896.hp2 HG02970.hp2 others(2): Show HG02723.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1	intron_variant	MODIFIER	c.933+5435A>G c.933+5435A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026739
chr9:124026862	C C	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.933+5558C>G c.933+5558C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026862
chr9:124026929	C C	T T	56	a0001c0001t0001g0059 a0001c0001t0002g0063 a0001c0001t0002g0118 others(53): Show a0001c0001t0001g0059 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	136	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(133): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-5491C>T c.934-5491C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124026929
chr9:124027121	G G	C C	3	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067 a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0067	4	HG02145.hp1 HG03139.hp2 HG03209.hp2 others(1): Show HG02145.hp1 HG03139.hp2 HG03209.hp2 HG03540.hp2	intron_variant	MODIFIER	c.934-5299G>C c.934-5299G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027121
chr9:124027227	A A	G G	59	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(56): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	141	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(138): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-5193A>G c.934-5193A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027227
chr9:124027247	G G	A A	1	a0001c0001t0001g0096 a0001c0001t0001g0096	1	HG04115.hp2 HG04115.hp2	intron_variant	MODIFIER	c.934-5173G>A c.934-5173G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027247
chr9:124027290	G G	T T	75	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(72): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0109 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	166	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(163): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02257.hp2 HG02273.hp2 HG02280.hp1 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-5130G>T c.934-5130G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027290
chr9:124027398	T T	G G	61	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(58): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	145	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(142): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-5022T>G c.934-5022T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027398
chr9:124027399	T T	C C	61	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(58): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	145	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(142): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-5021T>C c.934-5021T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027399
chr9:124027412	G G	A A	1	a0001c0001t0010g0097 a0001c0001t0010g0097	1	HG01167.hp1 HG01167.hp1	intron_variant	MODIFIER	c.934-5008G>A c.934-5008G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027412
chr9:124027536	T T	C C	1	a0001c0001t0001g0081 a0001c0001t0001g0081	1	NA18965.hp1 NA18965.hp1	intron_variant	MODIFIER	c.934-4884T>C c.934-4884T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027536
chr9:124027696	T T	C C	1	a0001c0002t0002g0050 a0001c0002t0002g0050	1	NA18978.hp1 NA18978.hp1	intron_variant	MODIFIER	c.934-4724T>C c.934-4724T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027696
chr9:124027831	C C	T T	3	a0001c0001t0001g0037 a0001c0001t0005g0037 a0001c0001t0010g0097 a0001c0001t0001g0037 a0001c0001t0005g0037 a0001c0001t0010g0097	3	HG01167.hp1 HG02055.hp2 HG02818.hp2 HG01167.hp1 HG02055.hp2 HG02818.hp2	intron_variant	MODIFIER	c.934-4589C>T c.934-4589C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027831
chr9:124027885	C C	T T	3	a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0002g0063 a0001c0001t0003g0180 a0001c0007t0003g0179	3	HG02109.hp1 HG02809.hp1 NA20129.hp1 HG02109.hp1 HG02809.hp1 NA20129.hp1	intron_variant	MODIFIER	c.934-4535C>T c.934-4535C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027885
chr9:124027902	G G	GT GT	48	a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 others(45): Show a0001c0001t0001g0059 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	128	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(125): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03098.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-4509dupT c.934-4509dupT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124027902
chr9:124027902	GT GT	G G	3	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149	5	HG02723.hp1 HG02896.hp2 HG02970.hp2 others(2): Show HG02723.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1	intron_variant	MODIFIER	c.934-4509delT c.934-4509delT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124027902
chr9:124027922	T T	C C	47	a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 others(44): Show a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	127	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(124): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-4498T>C c.934-4498T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124027922
chr9:124028281	C C	T T	12	a0001c0001t0001g0038 a0001c0001t0003g0005 a0001c0001t0003g0025 others(9): Show a0001c0001t0001g0038 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0093 a0001c0001t0003g0111 a0001c0001t0003g0115 a0001c0001t0006g0005 a0001c0002t0001g0052 a0001c0002t0011g0077 a0001c0009t0003g0005 a0002c0005t0001g0012	26	HG00408.hp1 HG01081.hp1 HG01123.hp1 others(23): Show HG00408.hp1 HG01081.hp1 HG01123.hp1 HG01255.hp1 HG01255.hp2 HG01496.hp2 HG01928.hp1 HG01993.hp2 HG02027.hp1 HG02165.hp1 HG02293.hp2 HG02615.hp2 HG03195.hp1 HG03486.hp1 HG03704.hp2 NA18747.hp2 NA18942.hp2 NA18948.hp1 NA18974.hp1 NA18986.hp2 NA18990.hp1 NA19001.hp2 NA19006.hp1 NA19012.hp1 NA19060.hp2 NA19063.hp1	intron_variant	MODIFIER	c.934-4139C>T c.934-4139C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028281
chr9:124028302	G G	A A	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.934-4118G>A c.934-4118G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028302
chr9:124028318	T T	C C	3	a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158	3	HG01884.hp2 HG02572.hp2 NA18522.hp2 HG01884.hp2 HG02572.hp2 NA18522.hp2	intron_variant	MODIFIER	c.934-4102T>C c.934-4102T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028318
chr9:124028328	A A	C C	61	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(58): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	145	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(142): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-4092A>C c.934-4092A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028328
chr9:124028387	T T	C C	61	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(58): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	145	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(142): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-4033T>C c.934-4033T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028387
chr9:124028452	T T	C C	1	a0001c0001t0003g0093 a0001c0001t0003g0093	1	HG02165.hp1 HG02165.hp1	intron_variant	MODIFIER	c.934-3968T>C c.934-3968T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028452
chr9:124028607	C C	G G	2	a0001c0001t0001g0073 a0001c0001t0005g0061 a0001c0001t0001g0073 a0001c0001t0005g0061	2	HG02145.hp2 HG06807.hp2 HG02145.hp2 HG06807.hp2	intron_variant	MODIFIER	c.934-3813C>G c.934-3813C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028607
chr9:124028619	C C	G G	1	a0001c0001t0004g0171 a0001c0001t0004g0171	1	HG01943.hp1 HG01943.hp1	intron_variant	MODIFIER	c.934-3801C>G c.934-3801C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028619
chr9:124028699	G G	T T	1	a0001c0001t0001g0156 a0001c0001t0001g0156	1	HG01884.hp2 HG01884.hp2	intron_variant	MODIFIER	c.934-3721G>T c.934-3721G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028699
chr9:124028723	G G	C C	1	a0001c0001t0001g0098 a0001c0001t0001g0098	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.934-3697G>C c.934-3697G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028723
chr9:124028734	C C	G G	12	a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 others(9): Show a0001c0001t0001g0009 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0109 a0001c0001t0002g0024 a0001c0001t0016g0178	18	HG00639.hp2 HG00735.hp2 HG01168.hp2 others(15): Show HG00639.hp2 HG00735.hp2 HG01168.hp2 HG01243.hp2 HG02040.hp2 HG02257.hp2 HG02280.hp1 HG03453.hp1 NA18906.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18989.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2	intron_variant	MODIFIER	c.934-3686C>G c.934-3686C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028734
chr9:124028880	G G	C C	1	a0001c0001t0001g0099 a0001c0001t0001g0099	1	HG02080.hp1 HG02080.hp1	intron_variant	MODIFIER	c.934-3540G>C c.934-3540G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028880
chr9:124028882	C C	T T	5	a0001c0002t0001g0027 a0001c0002t0003g0060 a0001c0002t0005g0027 others(2): Show a0001c0002t0001g0027 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076	5	HG01891.hp2 HG02630.hp1 HG02965.hp2 others(2): Show HG01891.hp2 HG02630.hp1 HG02965.hp2 HG03516.hp2 NA18522.hp1	intron_variant	MODIFIER	c.934-3538C>T c.934-3538C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028882
chr9:124028960	A A	G G	2	a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0007t0003g0179	2	HG02109.hp1 HG02809.hp1 HG02109.hp1 HG02809.hp1	intron_variant	MODIFIER	c.934-3460A>G c.934-3460A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124028960
chr9:124029009	T T	C C	91	a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 others(88): Show a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0109 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0024 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0093 a0001c0001t0003g0111 a0001c0001t0003g0115 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0001t0006g0005 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0014 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002 a0001c0009t0003g0005 a0002c0005t0001g0012	196	HG00280.hp1 HG00280.hp2 HG00408.hp1 others(193): Show HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18999.hp2 NA19001.hp2 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-3411T>C c.934-3411T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029009
chr9:124029011	G G	A A	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.934-3409G>A c.934-3409G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029011
chr9:124029020	G G	A A	1	a0001c0001t0001g0100 a0001c0001t0001g0100	1	HG02293.hp1 HG02293.hp1	intron_variant	MODIFIER	c.934-3400G>A c.934-3400G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029020
chr9:124029115	A A	AAAT AAAT	5	a0001c0001t0001g0026 a0001c0001t0001g0033 a0001c0001t0001g0066 others(2): Show a0001c0001t0001g0026 a0001c0001t0001g0033 a0001c0001t0001g0066 a0001c0001t0001g0145 a0001c0001t0002g0067	7	HG01099.hp1 HG02145.hp1 HG02895.hp1 others(4): Show HG01099.hp1 HG02145.hp1 HG02895.hp1 HG02897.hp1 HG03139.hp2 HG03209.hp2 HG03540.hp2	intron_variant	MODIFIER	c.934-3285_934-3283d others(5): Show c.934-3285_934-3283dupATA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124029115
chr9:124029115	A A	AAATAAT AAATAAT	3	a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0020 a0001c0001t0001g0148 a0001c0001t0001g0149	5	HG02723.hp1 HG02896.hp2 HG02970.hp2 others(2): Show HG02723.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1	intron_variant	MODIFIER	c.934-3288_934-3283d others(8): Show c.934-3288_934-3283dupATAATA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124029115
chr9:124029134	A A	AATG AATG	2	a0001c0002t0001g0021 a0001c0002t0014g0161 a0001c0002t0001g0021 a0001c0002t0014g0161	4	HG02559.hp1 HG02630.hp2 HG02970.hp1 others(1): Show HG02559.hp1 HG02630.hp2 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.934-3284_934-3283i others(5): Show c.934-3284_934-3283insGAT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124029134
chr9:124029138	G G	T T	2	a0001c0001t0001g0073 a0001c0001t0005g0061 a0001c0001t0001g0073 a0001c0001t0005g0061	2	HG02145.hp2 HG06807.hp2 HG02145.hp2 HG06807.hp2	intron_variant	MODIFIER	c.934-3282G>T c.934-3282G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029138
chr9:124029450	C C	T T	3	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177	4	HG02258.hp1 HG02486.hp1 HG03195.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.934-2970C>T c.934-2970C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029450
chr9:124029461	C C	A A	1	a0001c0002t0001g0127 a0001c0002t0001g0127	1	HG01346.hp1 HG01346.hp1	intron_variant	MODIFIER	c.934-2959C>A c.934-2959C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029461
chr9:124029466	A A	G G	1	a0001c0002t0001g0137 a0001c0002t0001g0137	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.934-2954A>G c.934-2954A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029466
chr9:124029628	C C	T T	11	a0001c0001t0001g0006 a0001c0001t0001g0029 a0001c0001t0001g0037 others(8): Show a0001c0001t0001g0006 a0001c0001t0001g0029 a0001c0001t0001g0037 a0001c0001t0001g0074 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0003g0006 a0001c0001t0005g0037 a0001c0001t0010g0097	17	HG01167.hp1 HG01433.hp2 HG01993.hp1 others(14): Show HG01167.hp1 HG01433.hp2 HG01993.hp1 HG02055.hp1 HG02055.hp2 HG02559.hp2 HG02572.hp1 HG02647.hp2 HG02717.hp2 HG02818.hp2 HG02886.hp1 HG02922.hp2 HG02976.hp1 HG03139.hp1 NA19030.hp1 NA19043.hp2 NA20805.hp2	intron_variant	MODIFIER	c.934-2792C>T c.934-2792C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029628
chr9:124029718	C C	A A	3	a0001c0001t0004g0046 a0001c0001t0004g0164 a0001c0001t0004g0173 a0001c0001t0004g0046 a0001c0001t0004g0164 a0001c0001t0004g0173	4	HG00609.hp2 NA19066.hp2 NA19077.hp1 others(1): Show HG00609.hp2 NA19066.hp2 NA19077.hp1 NA19080.hp2	intron_variant	MODIFIER	c.934-2702C>A c.934-2702C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029718
chr9:124029726	A A	G G	64	a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0036 others(61): Show a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0098 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0003g0105 a0001c0001t0004g0170 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	147	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(144): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02273.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19240.hp2 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-2694A>G c.934-2694A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029726
chr9:124029779	C C	T T	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.934-2641C>T c.934-2641C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029779
chr9:124029807	A A	G G	59	a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 others(56): Show a0001c0001t0001g0020 a0001c0001t0001g0059 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0063 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0001c0008t0001g0002	140	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(137): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.934-2613A>G c.934-2613A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029807
chr9:124029823	C C	T T	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.934-2597C>T c.934-2597C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124029823
chr9:124030036	A A	C C	1	a0001c0002t0002g0136 a0001c0002t0002g0136	1	NA19087.hp1 NA19087.hp1	intron_variant	MODIFIER	c.934-2384A>C c.934-2384A>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030036
chr9:124030209	G G	A A	3	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177	4	HG02258.hp1 HG02486.hp1 HG03195.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.934-2211G>A c.934-2211G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030209
chr9:124030236	C C	G G	62	a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0059 others(59): Show a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0094 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0024 a0001c0001t0002g0104 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	143	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(140): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02683.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-2184C>G c.934-2184C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030236
chr9:124030270	C C	T T	5	a0001c0002t0001g0043 a0001c0002t0001g0120 a0001c0002t0001g0134 others(2): Show a0001c0002t0001g0043 a0001c0002t0001g0120 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137	6	HG00280.hp1 HG01074.hp1 HG01167.hp2 others(3): Show HG00280.hp1 HG01074.hp1 HG01167.hp2 HG01169.hp2 HG03834.hp2 HG03927.hp1	intron_variant	MODIFIER	c.934-2150C>T c.934-2150C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030270
chr9:124030398	T T	C C	4	a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0024 others(1): Show a0001c0001t0001g0026 a0001c0001t0001g0066 a0001c0001t0002g0024 a0001c0002t0001g0052	6	HG02145.hp1 HG02615.hp2 HG03139.hp2 others(3): Show HG02145.hp1 HG02615.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp1 NA18906.hp2	intron_variant	MODIFIER	c.934-2022T>C c.934-2022T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030398
chr9:124030489	C C	G G	1	a0001c0001t0003g0032 a0001c0001t0003g0032	2	NA18747.hp2 NA18974.hp1 NA18747.hp2 NA18974.hp1	intron_variant	MODIFIER	c.934-1931C>G c.934-1931C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030489
chr9:124030512	G G	C C	1	a0001c0001t0001g0152 a0001c0001t0001g0152	1	HG03710.hp1 HG03710.hp1	intron_variant	MODIFIER	c.934-1908G>C c.934-1908G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030512
chr9:124030627	C C	CT CT	18	a0001c0001t0001g0018 a0001c0001t0001g0074 a0001c0001t0001g0108 others(15): Show a0001c0001t0001g0018 a0001c0001t0001g0074 a0001c0001t0001g0108 a0001c0001t0001g0154 a0001c0001t0003g0018 a0001c0001t0003g0115 a0001c0001t0004g0004 a0001c0001t0004g0046 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0173 a0001c0001t0007g0169	35	HG00140.hp1 HG00609.hp2 HG00642.hp2 others(32): Show HG00140.hp1 HG00609.hp2 HG00642.hp2 HG01069.hp1 HG01081.hp1 HG01106.hp1 HG01169.hp1 HG01243.hp1 HG01358.hp1 HG01943.hp1 HG02109.hp2 HG02258.hp2 HG02273.hp1 HG02615.hp1 HG02622.hp1 HG02717.hp2 HG02738.hp2 HG02809.hp2 HG02922.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp2 NA18945.hp1 NA18968.hp2 NA19030.hp1 NA19030.hp2 NA19066.hp2 NA19077.hp1 NA19080.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.934-1771dupT c.934-1771dupT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124030627
chr9:124030627	C C	T T	1	a0001c0001t0003g0103 a0001c0001t0003g0103	1	NA19004.hp1 NA19004.hp1	intron_variant	MODIFIER	c.934-1793C>T c.934-1793C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030627
chr9:124030627	CT CT	C C	75	a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0017 others(72): Show a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0017 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0034 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0176 a0001c0001t0002g0067 a0001c0001t0002g0104 a0001c0001t0002g0118 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0034 a0001c0001t0003g0079 a0001c0001t0003g0101 a0001c0001t0003g0111 a0001c0001t0004g0172 a0001c0001t0006g0005 a0001c0001t0016g0178 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0039 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0130 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002 a0001c0009t0003g0005 a0002c0005t0001g0012	169	HG00280.hp2 HG00408.hp1 HG00423.hp1 others(166): Show HG00280.hp2 HG00408.hp1 HG00423.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02630.hp2 HG02683.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02976.hp1 HG03017.hp2 HG03195.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp2 NA19079.hp1 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19088.hp2	intron_variant	MODIFIER	c.934-1771delT c.934-1771delT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124030627
chr9:124030627	CTT CTT	C C	17	a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0059 others(14): Show a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0075 a0001c0001t0001g0086 a0001c0001t0001g0149 a0001c0001t0002g0024 a0001c0002t0001g0027 a0001c0002t0001g0052 a0001c0002t0001g0129 a0001c0002t0001g0132 a0001c0002t0001g0134 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076	21	HG00280.hp1 HG01891.hp2 HG02145.hp1 others(18): Show HG00280.hp1 HG01891.hp2 HG02145.hp1 HG02615.hp2 HG02630.hp1 HG02723.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp2 HG03579.hp1 NA18522.hp1 NA18906.hp2 NA18941.hp1 NA19086.hp2	intron_variant	MODIFIER	c.934-1772_934-1771d others(4): Show c.934-1772_934-1771delTT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124030627
chr9:124030630	T T	TTC TTC	3	a0001c0002t0002g0007 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0007 a0001c0002t0002g0131 a0001c0002t0002g0136	9	HG00408.hp2 HG00673.hp1 NA18952.hp2 others(6): Show HG00408.hp2 HG00673.hp1 NA18952.hp2 NA18999.hp2 NA19067.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19087.hp1	intron_variant	MODIFIER	c.934-1789_934-1788i others(4): Show c.934-1789_934-1788insCT	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124030630
chr9:124030632	T T	C C	17	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0022 others(14): Show a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0016g0178 a0001c0002t0001g0040 a0002c0005t0001g0012	28	HG00408.hp1 HG00639.hp2 HG00735.hp2 others(25): Show HG00408.hp1 HG00639.hp2 HG00735.hp2 HG01168.hp2 HG01243.hp2 HG02040.hp2 HG02055.hp1 HG02257.hp2 HG02280.hp1 HG02572.hp2 HG02602.hp1 NA18522.hp2 NA18963.hp2 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18983.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA19001.hp2 NA19011.hp1 NA19043.hp1 NA19064.hp2 NA19070.hp2 NA19082.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-1788T>C c.934-1788T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030632
chr9:124030633	T T	C C	44	a0001c0001t0001g0013 a0001c0001t0001g0086 a0001c0001t0001g0094 others(41): Show a0001c0001t0001g0013 a0001c0001t0001g0086 a0001c0001t0001g0094 a0001c0001t0001g0155 a0001c0001t0002g0104 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0039 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0130 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0011g0077 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	117	HG00280.hp2 HG00423.hp1 HG00544.hp1 others(114): Show HG00280.hp2 HG00423.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02683.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19079.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19088.hp2	intron_variant	MODIFIER	c.934-1787T>C c.934-1787T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030633
chr9:124030634	T T	C C	3	a0001c0001t0001g0075 a0001c0002t0001g0129 a0001c0002t0001g0134 a0001c0001t0001g0075 a0001c0002t0001g0129 a0001c0002t0001g0134	3	HG00280.hp1 HG03471.hp1 NA18941.hp1 HG00280.hp1 HG03471.hp1 NA18941.hp1	intron_variant	MODIFIER	c.934-1786T>C c.934-1786T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030634
chr9:124030654	T T	C C	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.934-1766T>C c.934-1766T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030654
chr9:124030690	G G	T T	1	a0001c0002t0003g0060 a0001c0002t0003g0060	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.934-1730G>T c.934-1730G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030690
chr9:124030724	C C	T T	1	a0001c0001t0003g0180 a0001c0001t0003g0180	1	HG02809.hp1 HG02809.hp1	intron_variant	MODIFIER	c.934-1696C>T c.934-1696C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030724
chr9:124030756	C C	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG02257.hp2 HG02257.hp2	intron_variant	MODIFIER	c.934-1664C>T c.934-1664C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030756
chr9:124030771	A A	G G	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.934-1649A>G c.934-1649A>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030771
chr9:124030779	G G	A A	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.934-1641G>A c.934-1641G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030779
chr9:124030821	T T	C C	1	a0001c0001t0003g0065 a0001c0001t0003g0065	1	NA19081.hp1 NA19081.hp1	intron_variant	MODIFIER	c.934-1599T>C c.934-1599T>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030821
chr9:124030914	T T	G G	8	a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 others(5): Show a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0079 a0001c0001t0003g0101 a0001c0001t0003g0111 a0001c0001t0006g0005 a0001c0009t0003g0005	18	HG01123.hp1 HG01255.hp1 HG01255.hp2 others(15): Show HG01123.hp1 HG01255.hp1 HG01255.hp2 HG01496.hp2 HG01928.hp1 HG01993.hp2 HG02027.hp1 HG02293.hp2 NA18747.hp2 NA18942.hp2 NA18948.hp1 NA18974.hp1 NA19001.hp1 NA19006.hp1 NA19012.hp1 NA19012.hp2 NA19060.hp2 NA19063.hp1	intron_variant	MODIFIER	c.934-1506T>G c.934-1506T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030914
chr9:124030929	G G	A A	1	a0001c0001t0002g0114 a0001c0001t0002g0114	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.934-1491G>A c.934-1491G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124030929
chr9:124031001	G G	A A	1	a0001c0002t0002g0131 a0001c0002t0002g0131	1	NA19080.hp1 NA19080.hp1	intron_variant	MODIFIER	c.934-1419G>A c.934-1419G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031001
chr9:124031093	C C	T T	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.934-1327C>T c.934-1327C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031093
chr9:124031094	G G	A A	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.934-1326G>A c.934-1326G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031094
chr9:124031115	G G	T T	3	a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0047 a0001c0001t0001g0176 a0001c0001t0001g0177	4	HG02258.hp1 HG02486.hp1 HG03195.hp2 others(1): Show HG02258.hp1 HG02486.hp1 HG03195.hp2 NA20300.hp2	intron_variant	MODIFIER	c.934-1305G>T c.934-1305G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031115
chr9:124031137	G G	A A	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02559.hp1 HG02970.hp1 HG03130.hp1 HG02559.hp1 HG02970.hp1 HG03130.hp1	intron_variant	MODIFIER	c.934-1283G>A c.934-1283G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031137
chr9:124031305	C C	A A	2	a0001c0001t0003g0180 a0001c0007t0003g0179 a0001c0001t0003g0180 a0001c0007t0003g0179	2	HG02109.hp1 HG02809.hp1 HG02109.hp1 HG02809.hp1	intron_variant	MODIFIER	c.934-1115C>A c.934-1115C>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031305
chr9:124031305	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG03195.hp1 HG03486.hp1 HG03195.hp1 HG03486.hp1	intron_variant	MODIFIER	c.934-1115C>T c.934-1115C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031305
chr9:124031455	GA GA	G G	9	a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0002t0001g0027 others(6): Show a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0002t0001g0027 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076	9	HG01891.hp2 HG02630.hp1 HG02965.hp2 others(6): Show HG01891.hp2 HG02630.hp1 HG02965.hp2 HG03098.hp2 HG03516.hp2 HG03579.hp1 NA18522.hp1 NA18982.hp2 NA18983.hp2	intron_variant	MODIFIER	c.934-953delA c.934-953delA	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124031455
chr9:124031851	G G	A A	1	a0001c0001t0001g0038 a0001c0001t0001g0038	2	HG03195.hp1 HG03486.hp1 HG03195.hp1 HG03486.hp1	intron_variant	MODIFIER	c.934-569G>A c.934-569G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031851
chr9:124031894	G G	A A	49	a0001c0001t0001g0013 a0001c0001t0001g0094 a0001c0001t0001g0155 others(46): Show a0001c0001t0001g0013 a0001c0001t0001g0094 a0001c0001t0001g0155 a0001c0001t0002g0104 a0001c0001t0002g0118 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0011g0077 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002	129	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(126): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02683.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19004.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-526G>A c.934-526G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124031894
chr9:124032046	T T	G G	80	a0001c0001t0001g0013 a0001c0001t0001g0020 a0001c0001t0001g0026 others(77): Show a0001c0001t0001g0013 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0075 a0001c0001t0001g0094 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0002g0024 a0001c0001t0002g0104 a0001c0001t0002g0118 a0001c0001t0003g0005 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0079 a0001c0001t0003g0101 a0001c0001t0003g0111 a0001c0001t0003g0115 a0001c0001t0004g0168 a0001c0001t0004g0172 a0001c0001t0006g0005 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0052 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0003g0060 a0001c0002t0005g0027 a0001c0002t0005g0048 a0001c0002t0005g0076 a0001c0002t0011g0077 a0001c0002t0014g0161 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0008t0001g0002 a0001c0009t0003g0005	176	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(173): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03490.hp1 HG03490.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18966.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp2 NA18989.hp2 NA18999.hp2 NA19001.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-374T>G c.934-374T>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124032046
chr9:124032094	C C	T T	1	a0001c0002t0002g0049 a0001c0002t0002g0049	1	NA18956.hp1 NA18956.hp1	intron_variant	MODIFIER	c.934-326C>T c.934-326C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124032094
chr9:124032317	C C	T T	13	a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0001g0066 others(10): Show a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0001g0066 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0067 a0001c0001t0003g0180 a0001c0001t0005g0061 a0001c0002t0001g0021 a0001c0002t0001g0052 a0001c0002t0014g0161 a0001c0007t0003g0179	18	HG02109.hp1 HG02145.hp1 HG02258.hp1 others(15): Show HG02109.hp1 HG02145.hp1 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02630.hp2 HG02809.hp1 HG02970.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03540.hp2 HG06807.hp2 NA18906.hp2 NA20300.hp2	intron_variant	MODIFIER	c.934-103C>T c.934-103C>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124032317
chr9:124032351	G G	C C	1	a0001c0001t0001g0102 a0001c0001t0001g0102	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.934-69G>C c.934-69G>C	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124032351
chr9:124032363	C C	CG CG	53	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0022 others(50): Show a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0035 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0086 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0002g0024 a0001c0001t0002g0035 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0104 a0001c0001t0002g0118 a0001c0001t0003g0180 a0001c0001t0005g0061 a0001c0001t0007g0165 a0001c0001t0007g0169 a0001c0001t0016g0178 a0001c0002t0001g0003 a0001c0002t0001g0021 a0001c0002t0001g0052 a0001c0002t0001g0143 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0122 a0001c0002t0002g0123 a0001c0002t0002g0128 a0001c0002t0002g0131 a0001c0002t0002g0136 a0001c0002t0002g0144 a0001c0002t0002g0159 a0001c0002t0002g0175 a0001c0002t0011g0077 a0001c0003t0002g0015 a0001c0003t0002g0019 a0001c0003t0002g0142 a0001c0004t0002g0003 a0001c0007t0003g0179 a0002c0005t0001g0012	108	HG00408.hp1 HG00408.hp2 HG00544.hp1 others(105): Show HG00408.hp1 HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01099.hp2 HG01123.hp2 HG01168.hp2 HG01192.hp2 HG01243.hp2 HG01257.hp1 HG01258.hp2 HG01358.hp2 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG02015.hp1 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02109.hp1 HG02129.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02683.hp1 HG02809.hp1 HG02970.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03239.hp2 HG03453.hp1 HG03540.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18939.hp1 NA18943.hp2 NA18945.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18963.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18999.hp2 NA19001.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19043.hp1 NA19064.hp2 NA19067.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19082.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA20129.hp1 NA20300.hp2	intron_variant	MODIFIER	c.934-51dupG c.934-51dupG	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr9	124032363
chr9:124032369	G G	A A	28	a0001c0001t0001g0013 a0001c0001t0001g0094 a0001c0001t0001g0155 others(25): Show a0001c0001t0001g0013 a0001c0001t0001g0094 a0001c0001t0001g0155 a0001c0001t0003g0105 a0001c0001t0004g0172 a0001c0002t0001g0002 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0119 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0008t0001g0002	68	HG00280.hp1 HG00280.hp2 HG00423.hp1 others(65): Show HG00280.hp1 HG00280.hp2 HG00423.hp1 HG00558.hp2 HG00621.hp2 HG00642.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01346.hp1 HG01496.hp1 HG01516.hp2 HG01891.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp2 HG02056.hp1 HG02083.hp2 HG02132.hp2 HG02135.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp1 HG04228.hp1 NA18612.hp1 NA18940.hp2 NA18941.hp1 NA18961.hp1 NA18963.hp1 NA18964.hp2 NA18973.hp2 NA18977.hp2 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA19004.hp2 NA19009.hp1 NA19011.hp2 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19075.hp2 NA19079.hp1 NA19084.hp1 NA19085.hp2 NA19088.hp2 NA20300.hp1	intron_variant	MODIFIER	c.934-51G>A c.934-51G>A	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	4/4		chr9	124032369

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🧬 JoGo Online Haplotype Explorer LHX2_chr9_124006768_124038301

JoGo Local Haplotype Explorer (on iGV) LHX2_chr9_124006768_124038301

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 2)

CCoding Level Haplotype Info (Total: 10)

TTranscript Level Haplotype Info (Total: 16)

GGenebody Level Haplotype Info (Total: 180)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 10)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 27)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 201)

Haplotype Details by Sample (Haploid Level) (Total: 402)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 1)

CCoding Level Variants (Synonymous Mutations) (Total: 7)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 15)

GGenebody Level Haplotype Variants (Intron) (Total: 272)

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Annotation (Repeats)

Annotation (SNP Array)