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geneid	7873
ensemblid	ENSG00000145050.19
hgncid	15461
symbol	MANF
name	mesencephalic astrocyte derived neurotrophic factor
refseq_nuc	NM_006010.6
refseq_prot	NP_006001.5
ensembl_nuc	ENST00000528157.7
ensembl_prot	ENSP00000432799.3
mane_status	MANE Select
chr	chr3
start	51385291
end	51389397
strand	+
ver	v1.2
region	chr3:51385291-51389397
region5000	chr3:51380291-51394397
regionname0	MANF_chr3_51385291_51389397
regionname5000	MANF_chr3_51380291_51394397

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	182	384	78	68	184	14	38	142	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	549	379	78	68	184	14	33	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
c0002	0/0	549	5	0	0	0	0	5	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	361	308	61	48	155	9	34	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0002	0/0	361	30	1	11	12	3	3	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0003	0/0	355	13	10	3	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0004	0/0	358	9	2	2	3	2	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0005	0/0	367	8	0	2	6	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0006	0/1	358	6	1	2	1	0	1	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0007	0/0	364	3	0	0	3	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0008	0/0	370	3	0	0	3	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0009	0/0	364	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0010	0/0	361	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0011	0/0	361	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
t0012	0/0	361	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	225	23	45	109	11	35	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0002	0/0	89	2	16	67	2	2	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0003	0/0	12	12	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0004	0/0	9	7	2	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0005	0/0	5	5	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0006	0/0	5	5	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0007	0/0	5	3	2	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0008	0/0	5	5	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0009	0/0	3	0	3	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0010	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0011	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0012	0/0	2	0	0	2	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0013	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0014	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0015	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0016	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0017	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0018	0/0	1	0	0	0	1	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0019	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0020	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0021	0/0	1	0	0	0	0	1	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0022	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0023	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0024	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0025	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0026	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0027	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0028	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
g0029	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	549	379	78	68	184	14	33	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0002	0/0	549	5	0	0	0	0	5	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	909	303	61	48	155	9	29	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0002	0/0	909	30	1	11	12	3	3	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0003	0/0	903	13	10	3	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0004	0/0	906	9	2	2	3	2	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0005	0/0	915	8	0	2	6	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0006	0/1	906	6	1	2	1	0	1	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0007	0/0	912	3	0	0	3	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0008	0/0	918	3	0	0	3	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0009	0/0	912	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0010	0/0	909	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0011	0/0	909	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0001t0012	0/0	909	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397
a0001c0002t0001	0/0	909	5	0	0	0	0	5	MANF_chr3_51380291_51394397	MANF	copy fasta	chr3	51380291	51394397

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	174	20	33	86	8	26	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0002	0/0	78	1	13	62	0	2	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0003	0/0	11	11	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0005	0/0	5	5	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0006	0/0	5	5	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0007	0/0	5	3	2	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0008	0/0	5	5	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0010	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0012	0/0	2	0	0	2	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0013	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0014	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0016	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0018	0/0	1	0	0	0	1	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0019	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0020	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0021	0/0	1	0	0	0	0	1	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0022	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0023	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0026	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0027	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0001g0029	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0002g0001	0/0	28	1	9	12	3	3	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0002g0009	0/0	2	0	2	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0003g0002	0/0	1	0	1	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0003g0003	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0003g0004	0/0	9	7	2	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0003g0011	0/0	2	2	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0004g0001	0/0	2	1	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0004g0002	0/0	7	1	2	2	2	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0005g0001	0/0	7	0	2	5	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0005g0002	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0006g0001	0/1	4	1	1	0	0	1	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0006g0009	0/0	1	0	1	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0006g0024	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0007g0001	0/0	3	0	0	3	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0008g0001	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0008g0002	0/0	2	0	0	2	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0009g0001	0/0	1	0	0	1	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0010g0028	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0011g0025	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0001t0012g0017	0/0	1	1	0	0	0	0	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
a0001c0002t0001g0001	0/0	5	0	0	0	0	5	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0001	EUR	GBR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00140	hp1	a0001	c0001	t0002	g0001	EUR	GBR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00140	hp2	a0001	c0001	t0001	g0018	EUR	GBR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00423	hp1	a0001	c0001	t0001	g0002	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00438	hp2	a0001	c0001	t0001	g0002	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00544	hp2	a0001	c0001	t0001	g0002	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00597	hp1	a0001	c0001	t0001	g0002	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00673	hp1	a0001	c0001	t0001	g0002	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00673	hp2	a0001	c0001	t0005	g0001	EAS	CHS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00733	hp1	a0001	c0001	t0002	g0009	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00735	hp1	a0001	c0001	t0002	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01070	hp1	a0001	c0001	t0001	g0007	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01074	hp1	a0001	c0001	t0003	g0004	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01081	hp2	a0001	c0001	t0004	g0002	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01167	hp1	a0001	c0001	t0002	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01168	hp2	a0001	c0001	t0002	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01169	hp1	a0001	c0001	t0002	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01175	hp1	a0001	c0001	t0001	g0007	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01175	hp2	a0001	c0001	t0002	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01243	hp1	a0001	c0001	t0003	g0004	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01257	hp1	a0001	c0001	t0002	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01261	hp1	a0001	c0001	t0004	g0002	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01346	hp2	a0001	c0001	t0006	g0009	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01496	hp1	a0001	c0001	t0002	g0009	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01496	hp2	a0001	c0001	t0005	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01516	hp1	a0001	c0001	t0004	g0002	EUR	IBS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01516	hp2	a0001	c0001	t0002	g0001	EUR	IBS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01517	hp1	a0001	c0001	t0004	g0002	EUR	IBS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01884	hp1	a0001	c0001	t0001	g0005	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01928	hp1	a0001	c0001	t0002	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01928	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01943	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01952	hp2	a0001	c0001	t0002	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01981	hp1	a0001	c0001	t0003	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01993	hp1	a0001	c0001	t0006	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02004	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02015	hp2	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02027	hp1	a0001	c0001	t0002	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02027	hp2	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02040	hp1	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02055	hp2	a0001	c0001	t0001	g0007	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02056	hp1	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02071	hp2	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02080	hp1	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02083	hp2	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02129	hp1	a0001	c0001	t0006	g0024	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02135	hp1	a0001	c0001	t0001	g0002	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02148	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02148	hp2	a0001	c0001	t0002	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02257	hp2	a0001	c0001	t0004	g0002	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02258	hp1	a0001	c0001	t0001	g0006	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02258	hp2	a0001	c0001	t0001	g0008	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02273	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02280	hp1	a0001	c0001	t0001	g0003	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02280	hp2	a0001	c0001	t0001	g0006	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02300	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02451	hp1	a0001	c0001	t0001	g0013	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02451	hp2	a0001	c0001	t0001	g0003	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02572	hp1	a0001	c0001	t0001	g0002	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02572	hp2	a0001	c0001	t0001	g0003	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02615	hp1	a0001	c0001	t0001	g0007	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02615	hp2	a0001	c0001	t0001	g0006	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02698	hp1	a0001	c0002	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02717	hp1	a0001	c0001	t0001	g0014	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02717	hp2	a0001	c0001	t0001	g0003	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02723	hp1	a0001	c0001	t0011	g0025	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02723	hp2	a0001	c0001	t0001	g0023	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02809	hp1	a0001	c0001	t0001	g0005	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02809	hp2	a0001	c0001	t0001	g0005	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02818	hp1	a0001	c0001	t0001	g0003	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02818	hp2	a0001	c0001	t0004	g0001	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02886	hp1	a0001	c0001	t0010	g0028	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02886	hp2	a0001	c0001	t0003	g0011	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02896	hp2	a0001	c0001	t0001	g0010	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02897	hp1	a0001	c0001	t0001	g0006	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02897	hp2	a0001	c0001	t0001	g0010	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02922	hp1	a0001	c0001	t0001	g0005	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02922	hp2	a0001	c0001	t0003	g0004	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02965	hp2	a0001	c0001	t0003	g0004	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02976	hp1	a0001	c0001	t0003	g0003	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02976	hp2	a0001	c0001	t0003	g0004	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03017	hp2	a0001	c0002	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03041	hp2	a0001	c0001	t0001	g0003	AFR	GWD	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03098	hp1	a0001	c0001	t0001	g0005	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03130	hp2	a0001	c0001	t0001	g0003	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03139	hp1	a0001	c0001	t0003	g0004	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03139	hp2	a0001	c0001	t0001	g0003	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03195	hp1	a0001	c0001	t0003	g0004	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03195	hp2	a0001	c0001	t0001	g0003	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03225	hp1	a0001	c0001	t0006	g0001	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03225	hp2	a0001	c0001	t0001	g0001	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03486	hp1	a0001	c0001	t0001	g0006	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03486	hp2	a0001	c0001	t0001	g0019	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03579	hp2	a0001	c0001	t0001	g0008	AFR	MSL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03654	hp2	a0001	c0001	t0001	g0021	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03669	hp1	a0001	c0002	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03831	hp2	a0001	c0001	t0002	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03834	hp2	a0001	c0001	t0002	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03927	hp1	a0001	c0001	t0006	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03927	hp2	a0001	c0001	t0002	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04184	hp1	a0001	c0002	t0001	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04199	hp1	a0001	c0001	t0001	g0002	SAS	STU	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18522	hp1	a0001	c0001	t0002	g0001	AFR	YRI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18522	hp2	a0001	c0001	t0001	g0008	AFR	YRI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18612	hp1	a0001	c0001	t0001	g0002	EAS	CHB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18612	hp2	a0001	c0001	t0007	g0001	EAS	CHB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18747	hp1	a0001	c0001	t0001	g0002	EAS	CHB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18906	hp2	a0001	c0001	t0003	g0004	AFR	YRI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18940	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18940	hp2	a0001	c0001	t0001	g0026	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18942	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18944	hp1	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18944	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18945	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18946	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18947	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18948	hp1	a0001	c0001	t0007	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18949	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18953	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18953	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18957	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18957	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18959	hp1	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18959	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18961	hp1	a0001	c0001	t0001	g0012	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18961	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18962	hp1	a0001	c0001	t0005	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18965	hp1	a0001	c0001	t0004	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18970	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18971	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18972	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18972	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18973	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18974	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18974	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18977	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18977	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18979	hp2	a0001	c0001	t0008	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18981	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18981	hp2	a0001	c0001	t0001	g0027	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18982	hp2	a0001	c0001	t0008	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18983	hp1	a0001	c0001	t0001	g0029	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18983	hp2	a0001	c0001	t0001	g0012	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18984	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18986	hp1	a0001	c0001	t0005	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18988	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18988	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18990	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18992	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18993	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18995	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18997	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18998	hp1	a0001	c0001	t0004	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18999	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19000	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19000	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19001	hp1	a0001	c0001	t0001	g0016	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19001	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19002	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19003	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19004	hp1	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19004	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19005	hp1	a0001	c0001	t0007	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19006	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19006	hp2	a0001	c0001	t0004	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19007	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19012	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19030	hp2	a0001	c0001	t0001	g0015	AFR	LWK	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19043	hp2	a0001	c0001	t0001	g0014	AFR	LWK	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19058	hp2	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19059	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19059	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19063	hp2	a0001	c0001	t0001	g0022	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19064	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19065	hp2	a0001	c0001	t0005	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19066	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19077	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19078	hp2	a0001	c0001	t0008	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19079	hp1	a0001	c0001	t0002	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19081	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19084	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19085	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19087	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19088	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19090	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19240	hp1	a0001	c0001	t0001	g0003	AFR	YRI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA19240	hp2	a0001	c0001	t0003	g0004	AFR	YRI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA20905	hp2	a0001	c0002	t0001	g0001	SAS	GIH	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01123	hp1	a0001	c0001	t0005	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02109	hp1	a0001	c0001	t0001	g0007	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02109	hp2	a0001	c0001	t0003	g0011	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02486	hp1	a0001	c0001	t0001	g0008	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02486	hp2	a0001	c0001	t0001	g0003	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02559	hp1	a0001	c0001	t0001	g0008	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG06807	hp1	a0001	c0001	t0012	g0017	AFR	USA	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
HG06807	hp2	a0001	c0001	t0001	g0020	AFR	USA	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18955	hp1	a0001	c0001	t0009	g0001	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA18955	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA21309	hp1	a0001	c0001	t0001	g0015	AFR	LWK	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
NA21309	hp2	a0001	c0001	t0001	g0013	AFR	LWK	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
homoSapiens_chm13v2	hp1	a0001	c0001	t0006	g0001	REF	REF	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	MANF_chr3_51380291_51394397	MANF	chr3	51380291	51394397

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:51385326	G G	GGAGGAGG others(2): Show GGAGGAGGAT	1	a0001 a0001	3	NA18979.hp2 NA18982.hp2 NA19078.hp2 NA18979.hp2 NA18982.hp2 NA19078.hp2	conservative_inframe_insertion	MODERATE	c.4_12dupAGGAGGATG c.4_12dupAGGAGGATG	p.Arg2_Met4dup p.Arg2_Met4dup	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	65/909	13/549	5/182		INFO_REALIGN_3_PRIME	chr3	51385326

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:51389023	C C	T T	1	a0001c0002 a0001c0002	5	HG02698.hp1 HG03017.hp2 HG03669.hp1 others(2): Show HG02698.hp1 HG03017.hp2 HG03669.hp1 HG04184.hp1 NA20905.hp2	synonymous_variant	LOW	c.483C>T c.483C>T	p.Ile161Ile p.Ile161Ile	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	4/4	535/909	483/549	161/182			chr3	51389023

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr3:51385310	C C	CGGA CGGA	2	a0001c0001t0007 a0001c0001t0009 a0001c0001t0007 a0001c0001t0009	4	NA18612.hp2 NA18948.hp1 NA18955.hp1 others(1): Show NA18612.hp2 NA18948.hp1 NA18955.hp1 NA19005.hp1	5_prime_UTR_variant	MODIFIER	c.-11_-9dupGGA c.-11_-9dupGGA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	8	INFO_REALIGN_3_PRIME	chr3	51385310
chr3:51385310	C C	CGGAGGA CGGAGGA	1	a0001c0001t0005 a0001c0001t0005	8	HG00673.hp2 HG01123.hp1 HG01496.hp2 others(5): Show HG00673.hp2 HG01123.hp1 HG01496.hp2 NA18953.hp1 NA18962.hp1 NA18981.hp1 NA18986.hp1 NA19065.hp2	5_prime_UTR_variant	MODIFIER	c.-14_-9dupGGAGGA c.-14_-9dupGGAGGA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	8	INFO_REALIGN_3_PRIME	chr3	51385310
chr3:51385310	CGGA CGGA	C C	1	a0001c0001t0004 a0001c0001t0004	9	HG01081.hp2 HG01261.hp1 HG01516.hp1 others(6): Show HG01081.hp2 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG02257.hp2 HG02818.hp2 NA18965.hp1 NA18998.hp1 NA19006.hp2	5_prime_UTR_variant	MODIFIER	c.-11_-9delGGA c.-11_-9delGGA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	9	INFO_REALIGN_3_PRIME	chr3	51385310
chr3:51385310	CGGAGGA CGGAGGA	C C	1	a0001c0001t0003 a0001c0001t0003	13	HG01074.hp1 HG01243.hp1 HG01981.hp1 others(10): Show HG01074.hp1 HG01243.hp1 HG01981.hp1 HG02109.hp2 HG02886.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp1 NA18906.hp2 NA19240.hp2	5_prime_UTR_variant	MODIFIER	c.-14_-9delGGAGGA c.-14_-9delGGAGGA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	9	INFO_REALIGN_3_PRIME	chr3	51385310
chr3:51385332	GGAT GGAT	G G	1	a0001c0001t0006 a0001c0001t0006	6	HG01346.hp2 HG01993.hp1 HG02129.hp1 others(3): Show HG01346.hp2 HG01993.hp1 HG02129.hp1 HG03225.hp1 HG03927.hp1 homoSapiens_chm13v2.hp1	5_prime_UTR_variant	MODIFIER	c.-8_-6delTGA c.-8_-6delTGA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	6	INFO_REALIGN_3_PRIME	chr3	51385332
chr3:51385335	T T	G G	2	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	33	HG00099.hp1 HG00140.hp1 HG00733.hp1 others(30): Show HG00099.hp1 HG00140.hp1 HG00733.hp1 HG00735.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01257.hp1 HG01496.hp1 HG01516.hp2 HG01928.hp1 HG01952.hp2 HG02027.hp1 HG02148.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp2 NA18522.hp1 NA18612.hp2 NA18944.hp1 NA18948.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18971.hp2 NA18977.hp2 NA18995.hp2 NA19000.hp2 NA19004.hp1 NA19005.hp1 NA19058.hp2 NA19079.hp1	5_prime_UTR_variant	MODIFIER	c.-8T>G c.-8T>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/4	8		chr3	51385335
chr3:51389190	A A	G G	1	a0001c0001t0012 a0001c0001t0012	1	HG06807.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.101A>G c.101A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	4/4	101		chr3	51389190
chr3:51389238	T T	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG02886.hp1 HG02886.hp1	3_prime_UTR_variant	MODIFIER	c.149T>A c.149T>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	4/4	149		chr3	51389238
chr3:51389240	C C	A A	1	a0001c0001t0011 a0001c0001t0011	1	HG02723.hp1 HG02723.hp1	3_prime_UTR_variant	MODIFIER	c.151C>A c.151C>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	4/4	151		chr3	51389240

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr3:51385454	G G	C C	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	NA19001.hp1 NA19001.hp1	intron_variant	MODIFIER	c.94+18G>C c.94+18G>C	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385454
chr3:51385473	C C	G G	11	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0015 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0003g0002 a0001c0001t0003g0004 a0001c0001t0004g0002 a0001c0001t0005g0002 a0001c0001t0008g0002 a0001c0001t0010g0028	108	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(105): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02735.hp1 HG02886.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03579.hp2 HG04199.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19030.hp2 NA19057.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.94+37C>G c.94+37C>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385473
chr3:51385523	A A	G G	1	a0001c0001t0001g0007 a0001c0001t0001g0007	5	HG01070.hp1 HG01175.hp1 HG02055.hp2 others(2): Show HG01070.hp1 HG01175.hp1 HG02055.hp2 HG02109.hp1 HG02615.hp1	intron_variant	MODIFIER	c.94+87A>G c.94+87A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385523
chr3:51385524	A A	C C	1	a0001c0001t0001g0007 a0001c0001t0001g0007	5	HG01070.hp1 HG01175.hp1 HG02055.hp2 others(2): Show HG01070.hp1 HG01175.hp1 HG02055.hp2 HG02109.hp1 HG02615.hp1	intron_variant	MODIFIER	c.94+88A>C c.94+88A>C	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385524
chr3:51385532	A A	G G	1	a0001c0001t0001g0007 a0001c0001t0001g0007	5	HG01070.hp1 HG01175.hp1 HG02055.hp2 others(2): Show HG01070.hp1 HG01175.hp1 HG02055.hp2 HG02109.hp1 HG02615.hp1	intron_variant	MODIFIER	c.94+96A>G c.94+96A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385532
chr3:51385532	AGGGCGG AGGGCGG	A A	4	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0010 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0003g0003	19	HG01884.hp1 HG02280.hp1 HG02451.hp2 others(16): Show HG01884.hp1 HG02280.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 NA19240.hp1	intron_variant	MODIFIER	c.94+114_94+119delGG others(4): Show c.94+114_94+119delGGGGCG	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr3	51385532
chr3:51385547	G G	C C	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	NA19001.hp1 NA19001.hp1	intron_variant	MODIFIER	c.94+111G>C c.94+111G>C	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385547
chr3:51385548	C C	G G	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	NA19001.hp1 NA19001.hp1	intron_variant	MODIFIER	c.94+112C>G c.94+112C>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385548
chr3:51385552	G G	A A	1	a0001c0001t0003g0011 a0001c0001t0003g0011	2	HG02109.hp2 HG02886.hp2 HG02109.hp2 HG02886.hp2	intron_variant	MODIFIER	c.94+116G>A c.94+116G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385552
chr3:51385657	A A	G G	1	a0001c0001t0003g0011 a0001c0001t0003g0011	2	HG02109.hp2 HG02886.hp2 HG02109.hp2 HG02886.hp2	intron_variant	MODIFIER	c.94+221A>G c.94+221A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385657
chr3:51385679	T T	G G	11	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0015 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0003g0002 a0001c0001t0004g0002 a0001c0001t0005g0002 a0001c0001t0008g0002 a0001c0001t0010g0028 a0001c0001t0012g0017	100	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(97): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02735.hp1 HG02886.hp1 HG03579.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19030.hp2 NA19057.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2 NA21309.hp1	intron_variant	MODIFIER	c.94+243T>G c.94+243T>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385679
chr3:51385714	C C	T T	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA18940.hp2 NA18940.hp2	intron_variant	MODIFIER	c.94+278C>T c.94+278C>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51385714
chr3:51386010	T T	G G	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	NA18981.hp2 NA18981.hp2	intron_variant	MODIFIER	c.95-198T>G c.95-198T>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	1/3		chr3	51386010
chr3:51386440	A A	G G	1	a0001c0001t0012g0017 a0001c0001t0012g0017	1	HG06807.hp1 HG06807.hp1	intron_variant	MODIFIER	c.222+105A>G c.222+105A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51386440
chr3:51386463	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG00140.hp2 HG00140.hp2	intron_variant	MODIFIER	c.222+128G>A c.222+128G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51386463
chr3:51386592	G G	T T	1	a0001c0001t0011g0025 a0001c0001t0011g0025	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.222+257G>T c.222+257G>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51386592
chr3:51386719	A A	G G	1	a0001c0001t0012g0017 a0001c0001t0012g0017	1	HG06807.hp1 HG06807.hp1	intron_variant	MODIFIER	c.222+384A>G c.222+384A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51386719
chr3:51386824	G G	A A	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.222+489G>A c.222+489G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51386824
chr3:51386931	AATTC AATTC	A A	2	a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0013 a0001c0001t0001g0014	4	HG02451.hp1 HG02717.hp1 NA19043.hp2 others(1): Show HG02451.hp1 HG02717.hp1 NA19043.hp2 NA21309.hp2	intron_variant	MODIFIER	c.222+600_222+603del others(4): Show c.222+600_222+603delCATT	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3	INFO_REALIGN_3_PRIME	chr3	51386931
chr3:51386945	C C	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	NA19030.hp2 NA21309.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.222+610C>A c.222+610C>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51386945
chr3:51387034	C C	T T	2	a0001c0001t0002g0009 a0001c0001t0006g0009 a0001c0001t0002g0009 a0001c0001t0006g0009	3	HG00733.hp1 HG01346.hp2 HG01496.hp1 HG00733.hp1 HG01346.hp2 HG01496.hp1	intron_variant	MODIFIER	c.222+699C>T c.222+699C>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387034
chr3:51387284	A A	G G	1	a0001c0001t0003g0004 a0001c0001t0003g0004	9	HG01074.hp1 HG01243.hp1 HG02922.hp2 others(6): Show HG01074.hp1 HG01243.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 NA18906.hp2 NA19240.hp2	intron_variant	MODIFIER	c.223-453A>G c.223-453A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387284
chr3:51387329	G G	A A	2	a0001c0001t0001g0008 a0001c0001t0010g0028 a0001c0001t0001g0008 a0001c0001t0010g0028	6	HG02258.hp2 HG02486.hp1 HG02559.hp1 others(3): Show HG02258.hp2 HG02486.hp1 HG02559.hp1 HG02886.hp1 HG03579.hp2 NA18522.hp2	intron_variant	MODIFIER	c.223-408G>A c.223-408G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387329
chr3:51387380	C C	T T	1	a0001c0001t0012g0017 a0001c0001t0012g0017	1	HG06807.hp1 HG06807.hp1	intron_variant	MODIFIER	c.223-357C>T c.223-357C>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387380
chr3:51387406	G G	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.223-331G>A c.223-331G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387406
chr3:51387408	G G	A A	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG03654.hp2 HG03654.hp2	intron_variant	MODIFIER	c.223-329G>A c.223-329G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387408
chr3:51387437	G G	A A	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	NA19063.hp2 NA19063.hp2	intron_variant	MODIFIER	c.223-300G>A c.223-300G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387437
chr3:51387461	C C	A A	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG02451.hp1 NA21309.hp2 HG02451.hp1 NA21309.hp2	intron_variant	MODIFIER	c.223-276C>A c.223-276C>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387461
chr3:51387461	C C	CA CA	4	a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0029 others(1): Show a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0029 a0001c0001t0003g0004	13	HG01074.hp1 HG01243.hp1 HG02922.hp2 others(10): Show HG01074.hp1 HG01243.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 NA18906.hp2 NA18961.hp1 NA18983.hp1 NA18983.hp2 NA19001.hp1 NA19240.hp2	intron_variant	MODIFIER	c.223-261dupA c.223-261dupA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3	INFO_REALIGN_3_PRIME	chr3	51387461
chr3:51387461	CA CA	C C	3	a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0019 a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0019	8	HG02258.hp1 HG02280.hp2 HG02615.hp2 others(5): Show HG02258.hp1 HG02280.hp2 HG02615.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG03486.hp1 HG03486.hp2	intron_variant	MODIFIER	c.223-261delA c.223-261delA	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3	INFO_REALIGN_3_PRIME	chr3	51387461
chr3:51387510	C C	T T	1	a0001c0001t0006g0024 a0001c0001t0006g0024	1	HG02129.hp1 HG02129.hp1	intron_variant	MODIFIER	c.223-227C>T c.223-227C>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387510
chr3:51387589	G G	T T	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	NA19001.hp1 NA19001.hp1	intron_variant	MODIFIER	c.223-148G>T c.223-148G>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	2/3		chr3	51387589
chr3:51388050	T T	C C	10	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0027 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0003g0002 a0001c0001t0004g0002 a0001c0001t0005g0002 a0001c0001t0008g0002 a0001c0001t0010g0028 a0001c0001t0012g0017	98	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(95): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02735.hp1 HG02886.hp1 HG03579.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19057.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2	intron_variant	MODIFIER	c.364+172T>C c.364+172T>C	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3		chr3	51388050
chr3:51388132	G G	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.364+254G>A c.364+254G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3		chr3	51388132
chr3:51388243	A A	G G	11	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0015 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0003g0002 a0001c0001t0004g0002 a0001c0001t0005g0002 a0001c0001t0008g0002 a0001c0001t0010g0028 a0001c0001t0012g0017	100	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(97): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02735.hp1 HG02886.hp1 HG03579.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19030.hp2 NA19057.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2 NA21309.hp1	intron_variant	MODIFIER	c.364+365A>G c.364+365A>G	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3		chr3	51388243
chr3:51388422	G G	A A	2	a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0005 a0001c0001t0001g0010	7	HG01884.hp1 HG02809.hp1 HG02809.hp2 others(4): Show HG01884.hp1 HG02809.hp1 HG02809.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG03098.hp1	intron_variant	MODIFIER	c.365-483G>A c.365-483G>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3		chr3	51388422
chr3:51388655	CTG CTG	C C	8	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0027 others(5): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0003g0002 a0001c0001t0004g0002 a0001c0001t0005g0002 a0001c0001t0008g0002	96	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(93): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02735.hp1 HG03579.hp2 HG04199.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19057.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2	intron_variant	MODIFIER	c.365-248_365-247del others(2): Show c.365-248_365-247delGT	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr3	51388655
chr3:51388740	G G	T T	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.365-165G>T c.365-165G>T	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3		chr3	51388740
chr3:51388885	C C	A A	10	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0027 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0003g0002 a0001c0001t0004g0002 a0001c0001t0005g0002 a0001c0001t0008g0002 a0001c0001t0010g0028 a0001c0001t0012g0017	98	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(95): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02735.hp1 HG02886.hp1 HG03579.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19057.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp2	intron_variant	MODIFIER	c.365-20C>A c.365-20C>A	MANF	ENSG00000145050.19	transcript	ENST00000528157.7	protein_coding	3/3		chr3	51388885

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🧬 JoGo Online Haplotype Explorer MANF_chr3_51380291_51394397

JoGo Local Haplotype Explorer (on iGV) MANF_chr3_51380291_51394397

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 2)

TTranscript Level Haplotype Info (Total: 12)

GGenebody Level Haplotype Info (Total: 29)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 2)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 13)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 43)

Haplotype Details by Sample (Haploid Level) (Total: 384)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 1)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 9)

GGenebody Level Haplotype Variants (Intron) (Total: 39)

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Annotation (Repeats)

Annotation (SNP Array)