JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	4817
ensemblid	ENSG00000158793.14
hgncid	7828
symbol	NIT1
name	nitrilase 1
refseq_nuc	NM_005600.3
refseq_prot	NP_005591.1
ensembl_nuc	ENST00000368009.7
ensembl_prot	ENSP00000356988.2
mane_status	MANE Select
chr	chr1
start	161118105
end	161121194
strand	+
ver	v1.2
region	chr1:161118105-161121194
region5000	chr1:161113105-161126194
regionname0	NIT1_chr1_161118105_161121194
regionname5000	NIT1_chr1_161113105_161126194

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	327	291	49	52	152	16	20	121	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0002	0/0	327	42	15	4	21	2	0	18	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0003	0/0	327	2	0	2	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0004	0/0	327	1	0	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0005	0/0	327	1	0	0	1	0	0	1	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0006	0/0	327	1	0	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	984	288	49	51	151	16	19	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0002	0/0	984	42	15	4	21	2	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0003	0/0	984	2	0	2	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0004	0/0	984	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0005	0/0	984	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0006	0/0	984	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0007	0/0	984	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0008	0/0	984	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
c0009	0/0	984	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	502	336	63	60	174	18	19	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
t0002	0/0	502	1	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
t0003	0/0	502	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	149	24	23	89	6	7	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0002	1/0	146	24	32	69	8	12	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0003	0/1	24	3	5	12	2	1	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0004	0/0	12	12	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0005	0/0	1	0	0	0	1	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0006	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0007	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0008	0/0	1	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0009	0/0	1	0	0	0	1	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0010	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
g0011	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	984	288	49	51	151	16	19	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0005	0/0	984	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0006	0/0	984	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0009	0/0	984	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0002c0002	0/0	984	42	15	4	21	2	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0003c0003	0/0	984	2	0	2	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0004c0007	0/0	984	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0005c0008	0/0	984	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0006c0004	0/0	984	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1485	287	49	51	151	16	18	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0001t0003	0/0	1485	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0005t0001	0/0	1485	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0006t0001	0/0	1485	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0001c0009t0001	0/0	1485	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0002c0002t0001	0/0	1485	41	14	4	21	2	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0002c0002t0002	0/0	1485	1	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0003c0003t0001	0/0	1485	2	0	2	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0004c0007t0001	0/0	1485	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0005c0008t0001	0/0	1485	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194
a0006c0004t0001	0/0	1485	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	copy fasta	chr1	161113105	161126194

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	104	9	17	67	4	7	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0002	1/0	141	24	30	68	8	10	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0003	0/1	23	3	4	12	2	1	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0004	0/0	12	12	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0005	0/0	1	0	0	0	1	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0006	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0007	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0008	0/0	1	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0009	0/0	1	0	0	0	1	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0010	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0001g0011	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0001t0003g0002	0/0	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0005t0001g0003	0/0	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0006t0001g0001	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0001c0009t0001g0002	0/0	1	0	0	0	0	1	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0002c0002t0001g0001	0/0	41	14	4	21	2	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0002c0002t0002g0001	0/0	1	1	0	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0003c0003t0001g0002	0/0	2	0	2	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0004c0007t0001g0001	0/0	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0005c0008t0001g0002	0/0	1	0	0	1	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
a0006c0004t0001g0001	0/0	1	0	1	0	0	0	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00099	hp2	a0002	c0002	t0001	g0001	EUR	GBR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00140	hp1	a0001	c0001	t0001	g0002	EUR	GBR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00280	hp2	a0001	c0001	t0001	g0002	EUR	FIN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00323	hp1	a0001	c0001	t0001	g0009	EUR	FIN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00621	hp2	a0001	c0001	t0001	g0002	EAS	CHS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00642	hp2	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00735	hp1	a0001	c0005	t0001	g0003	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00738	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00741	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01069	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01074	hp2	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01099	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01099	hp2	a0001	c0001	t0001	g0003	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01106	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01106	hp2	a0002	c0002	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01109	hp1	a0002	c0002	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01168	hp2	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01169	hp2	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01175	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01192	hp2	a0001	c0001	t0001	g0002	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01243	hp1	a0001	c0001	t0001	g0003	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01243	hp2	a0002	c0002	t0001	g0001	AMR	PUR	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01256	hp1	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01256	hp2	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01257	hp1	a0003	c0003	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01258	hp2	a0003	c0003	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01261	hp1	a0001	c0001	t0001	g0003	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01358	hp1	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01358	hp2	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01433	hp2	a0002	c0002	t0001	g0001	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01496	hp1	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01496	hp2	a0001	c0001	t0001	g0002	AMR	CLM	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01515	hp1	a0001	c0001	t0001	g0002	EUR	IBS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01516	hp1	a0001	c0001	t0001	g0002	EUR	IBS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01516	hp2	a0001	c0001	t0001	g0003	EUR	IBS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01517	hp1	a0001	c0001	t0001	g0002	EUR	IBS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01884	hp1	a0001	c0001	t0001	g0004	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01928	hp1	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01943	hp2	a0006	c0004	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02004	hp1	a0004	c0007	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02004	hp2	a0001	c0001	t0001	g0003	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02015	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02015	hp2	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02056	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02056	hp2	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02071	hp1	a0001	c0001	t0001	g0003	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02074	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02074	hp2	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02080	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02080	hp2	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02083	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02129	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02132	hp2	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02155	hp1	a0002	c0002	t0001	g0001	EAS	CDX	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02165	hp1	a0002	c0002	t0001	g0001	EAS	CDX	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02258	hp1	a0002	c0002	t0001	g0001	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02258	hp2	a0001	c0001	t0001	g0002	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02293	hp2	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02300	hp2	a0001	c0001	t0001	g0002	AMR	PEL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02451	hp1	a0001	c0001	t0001	g0002	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02451	hp2	a0001	c0001	t0001	g0004	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02523	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02523	hp2	a0001	c0001	t0001	g0002	EAS	KHV	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02572	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02572	hp2	a0001	c0001	t0001	g0008	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02602	hp1	a0001	c0001	t0003	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02602	hp2	a0001	c0001	t0001	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02615	hp1	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02615	hp2	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02622	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02622	hp2	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02647	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02647	hp2	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02698	hp1	a0001	c0001	t0001	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02698	hp2	a0001	c0001	t0001	g0003	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02717	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02717	hp2	a0001	c0001	t0001	g0004	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02723	hp1	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02723	hp2	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02735	hp2	a0001	c0001	t0001	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02738	hp1	a0001	c0001	t0001	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02809	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02809	hp2	a0001	c0001	t0001	g0004	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02818	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02818	hp2	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02886	hp1	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02886	hp2	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02895	hp1	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02895	hp2	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02897	hp1	a0002	c0002	t0001	g0001	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02897	hp2	a0001	c0001	t0001	g0004	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02922	hp1	a0001	c0001	t0001	g0002	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02922	hp2	a0002	c0002	t0001	g0001	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02965	hp1	a0002	c0002	t0001	g0001	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02965	hp2	a0001	c0001	t0001	g0004	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02970	hp1	a0001	c0001	t0001	g0004	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03195	hp1	a0001	c0001	t0001	g0003	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03195	hp2	a0001	c0001	t0001	g0002	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03209	hp1	a0002	c0002	t0002	g0001	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03209	hp2	a0001	c0001	t0001	g0004	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03453	hp1	a0001	c0001	t0001	g0004	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03453	hp2	a0001	c0001	t0001	g0002	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03486	hp1	a0002	c0002	t0001	g0001	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03486	hp2	a0001	c0001	t0001	g0002	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03491	hp2	a0001	c0001	t0001	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03516	hp2	a0002	c0002	t0001	g0001	AFR	ESN	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03540	hp2	a0001	c0001	t0001	g0004	AFR	GWD	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03831	hp1	a0001	c0009	t0001	g0002	SAS	BEB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03831	hp2	a0001	c0001	t0001	g0002	SAS	BEB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG04184	hp1	a0001	c0001	t0001	g0002	SAS	BEB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18522	hp1	a0002	c0002	t0001	g0001	AFR	YRI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18522	hp2	a0001	c0001	t0001	g0004	AFR	YRI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18612	hp1	a0001	c0001	t0001	g0002	EAS	CHB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18612	hp2	a0001	c0001	t0001	g0003	EAS	CHB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18747	hp1	a0001	c0001	t0001	g0002	EAS	CHB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18747	hp2	a0002	c0002	t0001	g0001	EAS	CHB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18939	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18940	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18942	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18943	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18944	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18944	hp2	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18945	hp1	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18946	hp2	a0001	c0001	t0001	g0010	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18947	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18948	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18948	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18949	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18950	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18951	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18952	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18954	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18957	hp2	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18959	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18960	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18961	hp2	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18962	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18963	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18964	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18964	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18965	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18966	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18967	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18967	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18968	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18969	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18972	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18972	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18977	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18980	hp2	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18981	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18982	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18983	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18984	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18985	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18986	hp1	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18986	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18987	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18987	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18988	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18988	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18990	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18993	hp1	a0001	c0001	t0001	g0011	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18993	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18997	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18997	hp2	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18998	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19001	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19001	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19003	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19005	hp1	a0001	c0006	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19005	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19006	hp1	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19006	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19007	hp1	a0001	c0001	t0001	g0006	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19009	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19010	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19011	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19012	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19043	hp2	a0001	c0001	t0001	g0002	AFR	LWK	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19060	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19062	hp1	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19062	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19063	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19063	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19064	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19065	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19066	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19067	hp2	a0005	c0008	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19068	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19074	hp2	a0001	c0001	t0001	g0007	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19077	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19080	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19088	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19088	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19089	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19091	hp1	a0002	c0002	t0001	g0001	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19091	hp2	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA19240	hp2	a0001	c0001	t0001	g0002	AFR	YRI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20129	hp2	a0001	c0001	t0001	g0002	AFR	ASW	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20752	hp1	a0001	c0001	t0001	g0005	EUR	TSI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20752	hp2	a0001	c0001	t0001	g0002	EUR	TSI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20805	hp1	a0001	c0001	t0001	g0003	EUR	TSI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20805	hp2	a0002	c0002	t0001	g0001	EUR	TSI	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20905	hp2	a0001	c0001	t0001	g0002	SAS	GIH	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02109	hp1	a0001	c0001	t0001	g0003	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02109	hp2	a0001	c0001	t0001	g0002	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02559	hp1	a0001	c0001	t0001	g0004	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG02559	hp2	a0001	c0001	t0001	g0002	AFR	ACB	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03471	hp1	a0002	c0002	t0001	g0001	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18955	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA18955	hp2	a0001	c0001	t0001	g0003	EAS	JPT	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA21309	hp1	a0001	c0001	t0001	g0003	AFR	LWK	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
NA21309	hp2	a0001	c0001	t0001	g0002	AFR	LWK	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0003	REF	REF	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0002	REF	REF	NIT1_chr1_161113105_161126194	NIT1	chr1	161113105	161126194

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:161118793	T T	G G	1	a0002 a0002	42	HG00099.hp2 HG01106.hp2 HG01109.hp1 others(39): Show HG00099.hp2 HG01106.hp2 HG01109.hp1 HG01243.hp2 HG01433.hp2 HG02155.hp1 HG02165.hp1 HG02258.hp1 HG02615.hp1 HG02615.hp2 HG02723.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG03209.hp1 HG03471.hp1 HG03486.hp1 HG03516.hp2 NA18522.hp1 NA18747.hp2 NA18943.hp2 NA18948.hp2 NA18950.hp1 NA18952.hp2 NA18964.hp2 NA18969.hp1 NA18972.hp1 NA18982.hp2 NA18984.hp1 NA18986.hp2 NA18987.hp2 NA18988.hp1 NA18997.hp2 NA19003.hp1 NA19011.hp1 NA19064.hp1 NA19065.hp1 NA19091.hp1 NA20805.hp2	missense_variant	MODERATE	c.10T>G c.10T>G	p.Phe4Val p.Phe4Val	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	2/7	82/1485	10/984	4/327	chr1	161118793
chr1:161119150	A A	C C	1	a0006 a0006	1	HG01943.hp2 HG01943.hp2	missense_variant	MODERATE	c.115A>C c.115A>C	p.Ile39Leu p.Ile39Leu	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	3/7	187/1485	115/984	39/327	chr1	161119150
chr1:161120542	T T	C C	1	a0004 a0004	1	HG02004.hp1 HG02004.hp1	missense_variant	MODERATE	c.761T>C c.761T>C	p.Val254Ala p.Val254Ala	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	7/7	833/1485	761/984	254/327	chr1	161120542
chr1:161120555	G G	T T	1	a0003 a0003	2	HG01257.hp1 HG01258.hp2 HG01257.hp1 HG01258.hp2	missense_variant	MODERATE	c.774G>T c.774G>T	p.Gln258His p.Gln258His	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	7/7	846/1485	774/984	258/327	chr1	161120555
chr1:161120665	G G	A A	1	a0005 a0005	1	NA19067.hp2 NA19067.hp2	missense_variant	MODERATE	c.884G>A c.884G>A	p.Arg295Gln p.Arg295Gln	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	7/7	956/1485	884/984	295/327	chr1	161120665

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:161119149	T T	G G	1	a0006c0004 a0006c0004	1	HG01943.hp2 HG01943.hp2	synonymous_variant	LOW	c.114T>G c.114T>G	p.Ala38Ala p.Ala38Ala	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	3/7	186/1485	114/984	38/327	chr1	161119149
chr1:161119293	G G	A A	1	a0001c0005 a0001c0005	1	HG00735.hp1 HG00735.hp1	synonymous_variant	LOW	c.258G>A c.258G>A	p.Glu86Glu p.Glu86Glu	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	3/7	330/1485	258/984	86/327	chr1	161119293
chr1:161120507	G G	A A	1	a0001c0006 a0001c0006	1	NA19005.hp1 NA19005.hp1	synonymous_variant	LOW	c.726G>A c.726G>A	p.Leu242Leu p.Leu242Leu	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	7/7	798/1485	726/984	242/327	chr1	161120507
chr1:161120732	C C	T T	1	a0001c0009 a0001c0009	1	HG03831.hp1 HG03831.hp1	synonymous_variant	LOW	c.951C>T c.951C>T	p.Asp317Asp p.Asp317Asp	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	7/7	1023/1485	951/984	317/327	chr1	161120732

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr1:161118118	C C	A A	1	a0002c0002t0002 a0002c0002t0002	1	HG03209.hp1 HG03209.hp1	5_prime_UTR_variant	MODIFIER	c.-59C>A c.-59C>A		NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	1/7				59		chr1	161118118
chr1:161120801	A A	G G	1	a0001c0001t0003 a0001c0001t0003	1	HG02602.hp1 HG02602.hp1	3_prime_UTR_variant	MODIFIER	c.36A>G c.36A>G		NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	7/7				36		chr1	161120801

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr1:161118210	G G	A A	1	a0001c0001t0001g0005 a0001c0001t0001g0005	1	NA20752.hp1 NA20752.hp1	intron_variant	MODIFIER	c.2+32G>A c.2+32G>A	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	1/6		chr1	161118210
chr1:161118559	C C	T T	1	a0001c0001t0001g0011 a0001c0001t0001g0011	1	NA18993.hp1 NA18993.hp1	intron_variant	MODIFIER	c.3-227C>T c.3-227C>T	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	1/6		chr1	161118559
chr1:161118738	T T	G G	1	a0001c0001t0001g0006 a0001c0001t0001g0006	1	NA19007.hp1 NA19007.hp1	intron_variant	MODIFIER	c.3-48T>G c.3-48T>G	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	1/6		chr1	161118738
chr1:161118905	A A	C C	3	a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0005t0001g0003 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0005t0001g0003	25	HG00621.hp1 HG00735.hp1 HG01099.hp2 others(22): Show HG00621.hp1 HG00735.hp1 HG01099.hp2 HG01243.hp1 HG01261.hp1 HG01516.hp2 HG02004.hp2 HG02071.hp1 HG02109.hp1 HG02698.hp2 HG03195.hp1 NA18612.hp2 NA18944.hp2 NA18945.hp1 NA18955.hp2 NA18957.hp2 NA18961.hp2 NA18980.hp2 NA18986.hp1 NA18993.hp1 NA19006.hp1 NA19062.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.98+24A>C c.98+24A>C	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	2/6		chr1	161118905
chr1:161119089	T T	C C	1	a0001c0001t0001g0007 a0001c0001t0001g0007	1	NA19074.hp2 NA19074.hp2	intron_variant	MODIFIER	c.99-45T>C c.99-45T>C	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	2/6		chr1	161119089
chr1:161119477	A A	G G	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	NA18946.hp2 NA18946.hp2	intron_variant	MODIFIER	c.354-32A>G c.354-32A>G	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	3/6		chr1	161119477
chr1:161119660	C C	CTAAACT CTAAACT	9	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0011 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0005t0001g0003 a0001c0006t0001g0001 a0002c0002t0001g0001 a0002c0002t0002g0001 a0004c0007t0001g0001 a0006c0004t0001g0001	174	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(171): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00621.hp1 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01261.hp1 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02293.hp1 HG02300.hp1 HG02615.hp1 HG02615.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03195.hp1 HG03209.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG04184.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18977.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp2 NA18988.hp1 NA18990.hp1 NA18993.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp1 NA19057.hp2 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp1 NA19077.hp2 NA19080.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.457+50_457+51insAA others(4): Show c.457+50_457+51insAACTTA	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	4/6	INFO_REALIGN_3_PRIME	chr1	161119660
chr1:161119962	G G	A A	1	a0001c0001t0001g0004 a0001c0001t0001g0004	12	HG01884.hp1 HG02451.hp2 HG02559.hp1 others(9): Show HG01884.hp1 HG02451.hp2 HG02559.hp1 HG02717.hp2 HG02809.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03209.hp2 HG03453.hp1 HG03540.hp2 NA18522.hp2	intron_variant	MODIFIER	c.591+10G>A c.591+10G>A	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	5/6		chr1	161119962
chr1:161120287	C C	G G	2	a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0005 a0001c0001t0001g0009	2	HG00323.hp1 NA20752.hp1 HG00323.hp1 NA20752.hp1	intron_variant	MODIFIER	c.717+55C>G c.717+55C>G	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	6/6		chr1	161120287
chr1:161120490	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG02572.hp2 HG02572.hp2	intron_variant	MODIFIER	c.718-9C>T c.718-9C>T	NIT1	ENSG00000158793.14	transcript	ENST00000368009.7	protein_coding	6/6		chr1	161120490

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer NIT1_chr1_161113105_161126194

JoGo Local Haplotype Explorer (on iGV) NIT1_chr1_161113105_161126194

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 3)

GGenebody Level Haplotype Info (Total: 11)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 11)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 21)

Haplotype Details by Sample (Haploid Level) (Total: 338)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 5)

CCoding Level Variants (Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 2)

GGenebody Level Haplotype Variants (Intron) (Total: 10)

External Link

Annotation (Repeats)

Annotation (SNP Array)