JoGo: Joint Open Genome and Omics Platform

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geneid	5308
ensemblid	ENSG00000164093.18
hgncid	9005
symbol	PITX2
name	paired like homeodomain 2
refseq_nuc	NM_000325.6
refseq_prot	NP_000316.2
ensembl_nuc	ENST00000644743.1
ensembl_prot	ENSP00000495061.1
mane_status	MANE Select
chr	chr4
start	110617423
end	110623077
strand	-
ver	v1.2
region	chr4:110617423-110623077
region5000	chr4:110612423-110628077
regionname0	PITX2_chr4_110617423_110623077
regionname5000	PITX2_chr4_110612423_110628077

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	324	422	94	72	198	18	38	156	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	975	415	91	69	198	18	37	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
c0002	0/0	975	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
c0003	0/0	975	3	0	3	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
c0004	0/0	975	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	1319	252	47	49	124	15	16	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0002	0/0	1318	110	9	17	65	3	16	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0003	0/0	1318	24	20	4	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0004	1/0	1320	12	2	1	3	0	5	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0005	0/0	1319	5	5	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0006	0/0	1319	4	3	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0007	0/0	1319	3	0	0	3	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0008	0/0	1318	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0009	0/0	1318	2	0	0	2	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0010	0/0	1318	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0011	0/0	1319	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0012	0/0	1318	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0013	0/0	1318	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0014	0/0	1319	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
t0015	0/0	1319	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	120	10	29	61	10	9	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0002	0/0	74	5	13	41	3	12	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0003	0/0	64	1	13	43	4	3	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0004	0/0	20	18	2	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0005	0/0	12	1	0	10	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0006	0/0	11	0	0	9	0	2	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0007	0/0	11	3	1	6	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0008	0/0	10	10	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0009	0/0	8	0	0	8	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0010	0/0	5	1	2	1	1	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0011	0/0	5	5	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0012	0/0	5	0	0	1	0	4	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0013	1/0	5	2	0	1	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0014	0/0	4	0	0	4	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0015	0/0	4	3	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0016	0/0	4	4	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0017	0/0	3	2	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0018	0/0	3	0	3	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0019	0/0	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0020	0/0	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0021	0/0	2	0	0	2	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0022	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0023	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0024	0/0	2	0	0	2	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0025	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0026	0/0	2	1	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0027	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0028	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0029	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0030	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0031	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0032	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0033	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0034	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0035	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0036	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0037	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0038	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0039	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0040	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0041	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0042	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0043	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0044	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0045	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0046	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0047	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0048	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0049	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0050	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0051	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0052	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0053	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0054	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0055	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0056	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0057	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
g0058	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	975	415	91	69	198	18	37	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0002	0/0	975	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0003	0/0	975	3	0	3	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0004	0/0	975	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	2293	249	45	49	124	15	15	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0002	0/0	2292	107	9	14	65	3	16	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0003	0/0	2292	24	20	4	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0004	1/0	2294	12	2	1	3	0	5	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0005	0/0	2293	5	5	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0006	0/0	2293	4	3	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0007	0/0	2293	3	0	0	3	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0008	0/0	2292	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0009	0/0	2292	2	0	0	2	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0010	0/0	2292	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0012	0/0	2292	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0013	0/0	2292	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0014	0/0	2293	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0001t0015	0/0	2293	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0002t0001	0/0	2293	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0002t0011	0/0	2293	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0003t0002	0/0	2292	3	0	3	0	0	0	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077
a0001c0004t0001	0/0	2293	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	copy fasta	chr4	110612423	110628077

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	120	10	29	61	10	9	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0003	0/0	64	1	13	43	4	3	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0007	0/0	11	3	1	6	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0008	0/0	10	10	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0009	0/0	8	0	0	8	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0010	0/0	5	1	2	1	1	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0011	0/0	5	5	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0016	0/0	4	4	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0025	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0026	0/0	2	1	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0028	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0030	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0042	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0043	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0049	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0050	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0052	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0053	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0054	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0001g0055	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0002	0/0	74	5	13	41	3	12	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0005	0/0	12	1	0	10	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0006	0/0	11	0	0	9	0	2	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0014	0/0	4	0	0	4	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0022	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0032	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0033	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0034	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0002g0035	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0003g0004	0/0	20	18	2	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0003g0017	0/0	3	2	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0003g0037	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0004g0012	0/0	5	0	0	1	0	4	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0004g0013	1/0	5	2	0	1	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0004g0057	0/0	1	0	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0004g0058	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0005g0019	0/0	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0005g0029	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0006g0015	0/0	4	3	1	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0007g0024	0/0	2	0	0	2	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0007g0039	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0008g0020	0/0	3	3	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0009g0021	0/0	2	0	0	2	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0010g0023	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0012g0036	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0013g0038	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0014g0040	0/0	1	0	0	1	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0001t0015g0056	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0002t0001g0027	0/0	2	2	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0002t0011g0031	0/0	1	1	0	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0003t0002g0018	0/0	3	0	3	0	0	0	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
a0001c0004t0001g0047	0/0	1	0	0	0	0	1	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0002	EUR	GBR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00140	hp1	a0001	c0001	t0002	g0002	EUR	GBR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00280	hp2	a0001	c0001	t0001	g0003	EUR	FIN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00323	hp1	a0001	c0001	t0001	g0010	EUR	FIN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00408	hp1	a0001	c0001	t0002	g0005	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00408	hp2	a0001	c0001	t0002	g0005	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00423	hp1	a0001	c0001	t0002	g0002	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00423	hp2	a0001	c0001	t0001	g0003	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00438	hp1	a0001	c0001	t0001	g0007	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00438	hp2	a0001	c0001	t0001	g0009	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00544	hp2	a0001	c0001	t0002	g0002	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00558	hp1	a0001	c0001	t0001	g0003	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00558	hp2	a0001	c0001	t0002	g0002	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00597	hp1	a0001	c0001	t0004	g0012	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00597	hp2	a0001	c0001	t0001	g0003	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00609	hp1	a0001	c0001	t0001	g0003	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00639	hp1	a0001	c0001	t0001	g0003	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00639	hp2	a0001	c0001	t0003	g0017	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00673	hp1	a0001	c0001	t0001	g0003	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00673	hp2	a0001	c0001	t0002	g0002	EAS	CHS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00733	hp2	a0001	c0001	t0001	g0026	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00735	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00738	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG00738	hp2	a0001	c0001	t0003	g0004	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01069	hp1	a0001	c0003	t0002	g0018	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01069	hp2	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01070	hp2	a0001	c0001	t0001	g0003	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01071	hp1	a0001	c0001	t0001	g0003	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01071	hp2	a0001	c0003	t0002	g0018	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01074	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01074	hp2	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01081	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01099	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01099	hp2	a0001	c0003	t0002	g0018	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01109	hp1	a0001	c0001	t0003	g0037	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01168	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01168	hp2	a0001	c0001	t0001	g0003	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01169	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01175	hp1	a0001	c0001	t0001	g0010	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01175	hp2	a0001	c0001	t0001	g0053	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01192	hp2	a0001	c0001	t0001	g0003	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01243	hp1	a0001	c0001	t0006	g0015	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01243	hp2	a0001	c0001	t0002	g0002	AMR	PUR	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01255	hp2	a0001	c0001	t0004	g0057	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01257	hp1	a0001	c0001	t0001	g0003	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01257	hp2	a0001	c0001	t0002	g0002	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01258	hp1	a0001	c0001	t0001	g0003	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01258	hp2	a0001	c0001	t0001	g0003	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01433	hp1	a0001	c0001	t0001	g0054	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01516	hp2	a0001	c0001	t0001	g0003	EUR	IBS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01517	hp2	a0001	c0001	t0001	g0003	EUR	IBS	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01891	hp1	a0001	c0001	t0003	g0004	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01934	hp1	a0001	c0001	t0001	g0003	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01943	hp2	a0001	c0001	t0001	g0003	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01952	hp1	a0001	c0001	t0002	g0032	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01975	hp2	a0001	c0001	t0003	g0004	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01978	hp1	a0001	c0001	t0001	g0007	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01978	hp2	a0001	c0001	t0002	g0002	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01981	hp1	a0001	c0001	t0001	g0003	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01993	hp2	a0001	c0001	t0001	g0003	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02040	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02055	hp1	a0001	c0001	t0002	g0002	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02055	hp2	a0001	c0001	t0008	g0020	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02071	hp2	a0001	c0001	t0001	g0009	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02080	hp1	a0001	c0001	t0001	g0007	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02080	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02132	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02145	hp1	a0001	c0001	t0015	g0056	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02145	hp2	a0001	c0001	t0003	g0004	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02148	hp2	a0001	c0001	t0001	g0043	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02155	hp1	a0001	c0001	t0002	g0002	EAS	CDX	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02155	hp2	a0001	c0001	t0001	g0003	EAS	CDX	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02257	hp1	a0001	c0001	t0005	g0019	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02257	hp2	a0001	c0001	t0001	g0051	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02258	hp1	a0001	c0001	t0001	g0026	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02258	hp2	a0001	c0001	t0003	g0004	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02280	hp2	a0001	c0001	t0001	g0008	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02293	hp1	a0001	c0001	t0001	g0003	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02300	hp2	a0001	c0001	t0002	g0002	AMR	PEL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02451	hp1	a0001	c0001	t0001	g0016	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02451	hp2	a0001	c0001	t0001	g0008	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02523	hp1	a0001	c0001	t0002	g0005	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02523	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02572	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02602	hp1	a0001	c0001	t0001	g0003	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02602	hp2	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02622	hp1	a0001	c0001	t0001	g0008	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02622	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02630	hp1	a0001	c0001	t0006	g0015	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02630	hp2	a0001	c0002	t0001	g0027	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02647	hp1	a0001	c0001	t0004	g0013	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02647	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02698	hp1	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02717	hp1	a0001	c0001	t0001	g0008	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02717	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02723	hp1	a0001	c0001	t0004	g0013	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02723	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02738	hp1	a0001	c0001	t0001	g0055	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02738	hp2	a0001	c0001	t0004	g0012	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02809	hp1	a0001	c0001	t0001	g0008	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02809	hp2	a0001	c0001	t0001	g0003	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02818	hp1	a0001	c0001	t0005	g0019	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02818	hp2	a0001	c0001	t0001	g0030	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02886	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02895	hp1	a0001	c0001	t0001	g0007	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02895	hp2	a0001	c0002	t0011	g0031	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02896	hp1	a0001	c0001	t0001	g0011	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02896	hp2	a0001	c0001	t0005	g0029	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02897	hp1	a0001	c0001	t0005	g0029	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02897	hp2	a0001	c0001	t0001	g0007	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02922	hp1	a0001	c0001	t0010	g0023	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02922	hp2	a0001	c0001	t0001	g0011	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02965	hp1	a0001	c0001	t0003	g0004	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02965	hp2	a0001	c0001	t0001	g0025	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02970	hp1	a0001	c0001	t0001	g0011	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02970	hp2	a0001	c0001	t0002	g0002	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02976	hp1	a0001	c0001	t0001	g0028	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02976	hp2	a0001	c0001	t0002	g0002	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03017	hp1	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03017	hp2	a0001	c0001	t0001	g0003	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03041	hp1	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03041	hp2	a0001	c0001	t0003	g0004	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03098	hp1	a0001	c0001	t0001	g0030	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03098	hp2	a0001	c0001	t0001	g0016	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03139	hp2	a0001	c0001	t0001	g0008	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03195	hp1	a0001	c0001	t0006	g0015	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03195	hp2	a0001	c0001	t0002	g0035	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03209	hp1	a0001	c0001	t0002	g0002	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03209	hp2	a0001	c0001	t0003	g0017	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03225	hp1	a0001	c0001	t0001	g0008	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03225	hp2	a0001	c0001	t0003	g0004	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03239	hp1	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03239	hp2	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03453	hp1	a0001	c0001	t0001	g0052	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03453	hp2	a0001	c0001	t0001	g0025	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03486	hp1	a0001	c0001	t0003	g0004	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03486	hp2	a0001	c0001	t0001	g0016	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03490	hp2	a0001	c0001	t0002	g0005	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03491	hp1	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03491	hp2	a0001	c0004	t0001	g0047	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03492	hp1	a0001	c0001	t0002	g0002	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03516	hp1	a0001	c0001	t0002	g0002	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03516	hp2	a0001	c0001	t0003	g0004	AFR	ESN	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03540	hp1	a0001	c0001	t0001	g0016	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03579	hp1	a0001	c0001	t0002	g0005	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03579	hp2	a0001	c0001	t0005	g0019	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03688	hp1	a0001	c0001	t0004	g0012	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03688	hp2	a0001	c0001	t0004	g0012	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03704	hp2	a0001	c0001	t0001	g0003	SAS	PJL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03831	hp1	a0001	c0001	t0012	g0036	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03831	hp2	a0001	c0001	t0001	g0007	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03927	hp1	a0001	c0001	t0002	g0002	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03942	hp1	a0001	c0001	t0002	g0006	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04115	hp2	a0001	c0001	t0001	g0042	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04184	hp1	a0001	c0001	t0004	g0012	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04184	hp2	a0001	c0001	t0004	g0013	SAS	BEB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04199	hp2	a0001	c0001	t0002	g0034	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04204	hp1	a0001	c0001	t0002	g0002	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04204	hp2	a0001	c0001	t0002	g0002	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04228	hp1	a0001	c0001	t0002	g0006	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18522	hp1	a0001	c0001	t0003	g0004	AFR	YRI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18522	hp2	a0001	c0001	t0003	g0004	AFR	YRI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18612	hp1	a0001	c0001	t0002	g0002	EAS	CHB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18612	hp2	a0001	c0001	t0001	g0003	EAS	CHB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18747	hp1	a0001	c0001	t0002	g0005	EAS	CHB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18906	hp1	a0001	c0001	t0001	g0011	AFR	YRI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18906	hp2	a0001	c0002	t0001	g0027	AFR	YRI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18940	hp1	a0001	c0001	t0002	g0005	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18941	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18941	hp2	a0001	c0001	t0007	g0024	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18943	hp1	a0001	c0001	t0002	g0005	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18945	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18946	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18946	hp2	a0001	c0001	t0009	g0021	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18947	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18947	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18948	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18948	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18949	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18949	hp2	a0001	c0001	t0001	g0007	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18950	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18951	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18952	hp2	a0001	c0001	t0002	g0014	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18954	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18954	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18956	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18957	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18957	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18959	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18959	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18960	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18961	hp1	a0001	c0001	t0001	g0041	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18962	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18963	hp1	a0001	c0001	t0009	g0021	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18963	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18964	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18965	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18965	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18966	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18968	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18970	hp1	a0001	c0001	t0001	g0046	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18970	hp2	a0001	c0001	t0001	g0044	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18971	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18973	hp2	a0001	c0001	t0001	g0049	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18975	hp1	a0001	c0001	t0002	g0005	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18977	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18978	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18979	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18980	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18982	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18983	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18984	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18985	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18985	hp2	a0001	c0001	t0014	g0040	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18988	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18988	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18990	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18990	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18992	hp2	a0001	c0001	t0001	g0009	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18994	hp2	a0001	c0001	t0002	g0005	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA18998	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19001	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19001	hp2	a0001	c0001	t0007	g0024	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19002	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19002	hp2	a0001	c0001	t0002	g0005	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19003	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19005	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19007	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19007	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19009	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19009	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19011	hp2	a0001	c0001	t0001	g0010	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19012	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19030	hp1	a0001	c0001	t0006	g0015	AFR	LWK	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19030	hp2	a0001	c0001	t0001	g0010	AFR	LWK	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19043	hp1	a0001	c0001	t0008	g0020	AFR	LWK	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19043	hp2	a0001	c0001	t0003	g0004	AFR	LWK	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19054	hp2	a0001	c0001	t0002	g0014	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19055	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19055	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19056	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19057	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19057	hp2	a0001	c0001	t0007	g0039	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19058	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19058	hp2	a0001	c0001	t0002	g0014	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19060	hp2	a0001	c0001	t0002	g0033	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19063	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19064	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19064	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19066	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19067	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19067	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19068	hp1	a0001	c0001	t0002	g0014	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19068	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19070	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19070	hp2	a0001	c0001	t0002	g0005	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19074	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19074	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19075	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19075	hp2	a0001	c0001	t0001	g0009	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19076	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19077	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19079	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19079	hp2	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19081	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19081	hp2	a0001	c0001	t0001	g0045	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19082	hp1	a0001	c0001	t0004	g0058	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19082	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19083	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19084	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19084	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19085	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19086	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19086	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19087	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19087	hp2	a0001	c0001	t0001	g0009	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19088	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19090	hp1	a0001	c0001	t0002	g0002	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19090	hp2	a0001	c0001	t0004	g0013	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19091	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19091	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19240	hp1	a0001	c0001	t0002	g0022	AFR	YRI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA19240	hp2	a0001	c0001	t0003	g0017	AFR	YRI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20129	hp1	a0001	c0001	t0001	g0007	AFR	ASW	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20129	hp2	a0001	c0001	t0010	g0023	AFR	ASW	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20752	hp1	a0001	c0001	t0001	g0003	EUR	TSI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20805	hp1	a0001	c0001	t0002	g0002	EUR	TSI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20905	hp1	a0001	c0001	t0002	g0002	SAS	GIH	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20905	hp2	a0001	c0001	t0002	g0002	SAS	GIH	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01123	hp1	a0001	c0001	t0001	g0010	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02109	hp1	a0001	c0001	t0001	g0050	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02109	hp2	a0001	c0001	t0013	g0038	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02486	hp1	a0001	c0001	t0001	g0008	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02559	hp1	a0001	c0001	t0001	g0008	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03471	hp1	a0001	c0001	t0008	g0020	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG03471	hp2	a0001	c0001	t0001	g0008	AFR	MSL	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG06807	hp1	a0001	c0001	t0002	g0022	AFR	USA	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
HG06807	hp2	a0001	c0001	t0001	g0011	AFR	USA	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA21309	hp1	a0001	c0001	t0001	g0048	AFR	LWK	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
NA21309	hp2	a0001	c0001	t0001	g0028	AFR	LWK	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077
homoSapiens_grch38	hp1	a0001	c0001	t0004	g0013	REF	REF	PITX2_chr4_110612423_110628077	PITX2	chr4	110612423	110628077

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr4:110618238	G G	A A	1	a0001c0003 a0001c0003	3	HG01069.hp1 HG01071.hp2 HG01099.hp2 HG01069.hp1 HG01071.hp2 HG01099.hp2	synonymous_variant	LOW	c.862C>T c.862C>T	p.Leu288Leu p.Leu288Leu	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	1479/2294	862/975	288/324	chr4	110618238
chr4:110618281	C C	T T	1	a0001c0004 a0001c0004	1	HG03491.hp2 HG03491.hp2	synonymous_variant	LOW	c.819G>A c.819G>A	p.Pro273Pro p.Pro273Pro	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	1436/2294	819/975	273/324	chr4	110618281
chr4:110618482	A A	C C	1	a0001c0002 a0001c0002	3	HG02630.hp2 HG02895.hp2 NA18906.hp2 HG02630.hp2 HG02895.hp2 NA18906.hp2	synonymous_variant	LOW	c.618T>G c.618T>G	p.Ser206Ser p.Ser206Ser	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	1235/2294	618/975	206/324	chr4	110618482

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr4:110617635	G G	A A	1	a0001c0001t0010 a0001c0001t0010	2	HG02922.hp1 NA20129.hp2 HG02922.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.490C>T c.490C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	490	chr4	110617635
chr4:110617654	C C	T T	1	a0001c0001t0005 a0001c0001t0005	5	HG02257.hp1 HG02818.hp1 HG02896.hp2 others(2): Show HG02257.hp1 HG02818.hp1 HG02896.hp2 HG02897.hp1 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.471G>A c.471G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	471	chr4	110617654
chr4:110617671	G G	A A	2	a0001c0001t0003 a0001c0001t0010 a0001c0001t0003 a0001c0001t0010	26	HG00639.hp2 HG00738.hp2 HG01109.hp1 others(23): Show HG00639.hp2 HG00738.hp2 HG01109.hp1 HG01891.hp1 HG01975.hp2 HG02145.hp2 HG02258.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03209.hp2 HG03225.hp2 HG03486.hp1 HG03516.hp2 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA19240.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.454C>T c.454C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	454	chr4	110617671
chr4:110617800	A A	G G	1	a0001c0001t0012 a0001c0001t0012	1	HG03831.hp1 HG03831.hp1	3_prime_UTR_variant	MODIFIER	c.325T>C c.325T>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	3/3	325	chr4	110617800
chr4:110622524	C C	T T	2	a0001c0001t0009 a0001c0001t0014 a0001c0001t0009 a0001c0001t0014	3	NA18946.hp2 NA18963.hp1 NA18985.hp2 NA18946.hp2 NA18963.hp1 NA18985.hp2	5_prime_UTR_variant	MODIFIER	c.-64G>A c.-64G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	64	chr4	110622524
chr4:110622597	G G	C C	1	a0001c0001t0013 a0001c0001t0013	1	HG02109.hp2 HG02109.hp2	5_prime_UTR_variant	MODIFIER	c.-137C>G c.-137C>G	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	137	chr4	110622597
chr4:110622696	G G	A A	1	a0001c0001t0015 a0001c0001t0015	1	HG02145.hp1 HG02145.hp1	5_prime_UTR_variant	MODIFIER	c.-236C>T c.-236C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	236	chr4	110622696
chr4:110622788	C C	T T	1	a0001c0001t0006 a0001c0001t0006	4	HG01243.hp1 HG02630.hp1 HG03195.hp1 others(1): Show HG01243.hp1 HG02630.hp1 HG03195.hp1 NA19030.hp1	5_prime_UTR_variant	MODIFIER	c.-328G>A c.-328G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	328	chr4	110622788
chr4:110622831	G G	T T	1	a0001c0001t0007 a0001c0001t0007	3	NA18941.hp2 NA19001.hp2 NA19057.hp2 NA18941.hp2 NA19001.hp2 NA19057.hp2	5_prime_UTR_variant	MODIFIER	c.-371C>A c.-371C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	371	chr4	110622831
chr4:110622846	GC GC	G G	9	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(6): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0014 a0001c0001t0015 a0001c0002t0001 a0001c0002t0011 a0001c0004t0001	267	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(264): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG02717.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp2 NA18945.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19060.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp2 NA19067.hp1 NA19070.hp1 NA19074.hp1 NA19075.hp2 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	5_prime_UTR_variant	MODIFIER	c.-387delG c.-387delG	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	387	chr4	110622846
chr4:110622846	GCC GCC	G G	8	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0003t0002	143	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(140): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01891.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02300.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18988.hp1 NA18994.hp2 NA18998.hp2 NA19001.hp1 NA19002.hp2 NA19003.hp2 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	5_prime_UTR_variant	MODIFIER	c.-388_-387delGG c.-388_-387delGG	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	387	chr4	110622846
chr4:110622855	C C	G G	1	a0001c0002t0011 a0001c0002t0011	1	HG02895.hp2 HG02895.hp2	5_prime_UTR_variant	MODIFIER	c.-395G>C c.-395G>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	395	chr4	110622855
chr4:110623054	G G	C C	1	a0001c0001t0008 a0001c0001t0008	3	HG02055.hp2 HG03471.hp1 NA19043.hp1 HG02055.hp2 HG03471.hp1 NA19043.hp1	5_prime_UTR_variant	MODIFIER	c.-594C>G c.-594C>G	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/3	594	chr4	110623054

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr4:110618790	C C	T T	2	a0001c0001t0001g0026 a0001c0001t0001g0053 a0001c0001t0001g0026 a0001c0001t0001g0053	3	HG00733.hp2 HG01175.hp2 HG02258.hp1 HG00733.hp2 HG01175.hp2 HG02258.hp1	intron_variant	MODIFIER	c.412-102G>A c.412-102G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110618790
chr4:110618843	C C	T T	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA18961.hp1 NA18961.hp1	intron_variant	MODIFIER	c.412-155G>A c.412-155G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110618843
chr4:110618894	C C	G G	1	a0001c0003t0002g0018 a0001c0003t0002g0018	3	HG01069.hp1 HG01071.hp2 HG01099.hp2 HG01069.hp1 HG01071.hp2 HG01099.hp2	intron_variant	MODIFIER	c.412-206G>C c.412-206G>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110618894
chr4:110618953	G G	T T	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.412-265C>A c.412-265C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110618953
chr4:110618959	A A	G G	1	a0001c0001t0001g0016 a0001c0001t0001g0016	4	HG02451.hp1 HG03098.hp2 HG03486.hp2 others(1): Show HG02451.hp1 HG03098.hp2 HG03486.hp2 HG03540.hp1	intron_variant	MODIFIER	c.412-271T>C c.412-271T>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110618959
chr4:110619121	C C	A A	1	a0001c0001t0001g0028 a0001c0001t0001g0028	2	HG02976.hp1 NA21309.hp2 HG02976.hp1 NA21309.hp2	intron_variant	MODIFIER	c.412-433G>T c.412-433G>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110619121
chr4:110619132	C C	T T	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.412-444G>A c.412-444G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110619132
chr4:110619222	C C	A A	1	a0001c0003t0002g0018 a0001c0003t0002g0018	3	HG01069.hp1 HG01071.hp2 HG01099.hp2 HG01069.hp1 HG01071.hp2 HG01099.hp2	intron_variant	MODIFIER	c.412-534G>T c.412-534G>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110619222
chr4:110619235	G G	A A	6	a0001c0001t0002g0022 a0001c0001t0002g0035 a0001c0001t0003g0004 others(3): Show a0001c0001t0002g0022 a0001c0001t0002g0035 a0001c0001t0003g0004 a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0010g0023	29	HG00639.hp2 HG00738.hp2 HG01109.hp1 others(26): Show HG00639.hp2 HG00738.hp2 HG01109.hp1 HG01891.hp1 HG01975.hp2 HG02145.hp2 HG02258.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03486.hp1 HG03516.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2	intron_variant	MODIFIER	c.412-547C>T c.412-547C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110619235
chr4:110619312	G G	A A	19	a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0005 others(16): Show a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0003g0004 a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0008g0020 a0001c0001t0009g0021 a0001c0001t0010g0023 a0001c0001t0012g0036 a0001c0001t0013g0038 a0001c0001t0014g0040 a0001c0003t0002g0018	144	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(141): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01891.hp1 HG01975.hp2 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02300.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18994.hp2 NA18998.hp2 NA19001.hp1 NA19002.hp2 NA19003.hp2 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.412-624C>T c.412-624C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110619312
chr4:110619501	C C	G G	2	a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0003g0017 a0001c0001t0003g0037	4	HG00639.hp2 HG01109.hp1 HG03209.hp2 others(1): Show HG00639.hp2 HG01109.hp1 HG03209.hp2 NA19240.hp2	intron_variant	MODIFIER	c.412-813G>C c.412-813G>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110619501
chr4:110620107	C C	G G	1	a0001c0001t0002g0033 a0001c0001t0002g0033	1	NA19060.hp2 NA19060.hp2	intron_variant	MODIFIER	c.411+1057G>C c.411+1057G>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620107
chr4:110620221	G G	A A	1	a0001c0001t0005g0029 a0001c0001t0005g0029	2	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	intron_variant	MODIFIER	c.411+943C>T c.411+943C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620221
chr4:110620251	AT AT	A A	2	a0001c0001t0001g0011 a0001c0001t0001g0016 a0001c0001t0001g0011 a0001c0001t0001g0016	9	HG02451.hp1 HG02896.hp1 HG02922.hp2 others(6): Show HG02451.hp1 HG02896.hp1 HG02922.hp2 HG02970.hp1 HG03098.hp2 HG03486.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp1	intron_variant	MODIFIER	c.411+912delA c.411+912delA	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620251
chr4:110620325	T T	C C	1	a0001c0001t0002g0034 a0001c0001t0002g0034	1	HG04199.hp2 HG04199.hp2	intron_variant	MODIFIER	c.411+839A>G c.411+839A>G	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620325
chr4:110620491	T T	G G	1	a0001c0003t0002g0018 a0001c0003t0002g0018	3	HG01069.hp1 HG01071.hp2 HG01099.hp2 HG01069.hp1 HG01071.hp2 HG01099.hp2	intron_variant	MODIFIER	c.411+673A>C c.411+673A>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620491
chr4:110620718	G G	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.411+446C>T c.411+446C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620718
chr4:110620890	G G	A A	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	NA18973.hp2 NA18973.hp2	intron_variant	MODIFIER	c.411+274C>T c.411+274C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620890
chr4:110620939	G G	A A	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	HG02109.hp1 HG02109.hp1	intron_variant	MODIFIER	c.411+225C>T c.411+225C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620939
chr4:110620968	G G	A A	19	a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0005 others(16): Show a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0003g0004 a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0008g0020 a0001c0001t0009g0021 a0001c0001t0010g0023 a0001c0001t0012g0036 a0001c0001t0013g0038 a0001c0001t0014g0040 a0001c0003t0002g0018	144	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(141): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01891.hp1 HG01975.hp2 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02300.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18994.hp2 NA18998.hp2 NA19001.hp1 NA19002.hp2 NA19003.hp2 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.411+196C>T c.411+196C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620968
chr4:110620998	G G	A A	7	a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0006 others(4): Show a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0008g0020 a0001c0001t0009g0021 a0001c0001t0012g0036 a0001c0001t0014g0040	93	HG00099.hp1 HG00140.hp1 HG00423.hp1 others(90): Show HG00099.hp1 HG00140.hp1 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02155.hp1 HG02300.hp2 HG02602.hp2 HG02698.hp1 HG02738.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18998.hp2 NA19001.hp1 NA19003.hp2 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.411+166C>T c.411+166C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110620998
chr4:110621074	G G	T T	1	a0001c0001t0012g0036 a0001c0001t0012g0036	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.411+90C>A c.411+90C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110621074
chr4:110621078	C C	T T	2	a0001c0001t0001g0009 a0001c0001t0001g0045 a0001c0001t0001g0009 a0001c0001t0001g0045	9	HG00438.hp2 HG02071.hp2 NA18959.hp1 others(6): Show HG00438.hp2 HG02071.hp2 NA18959.hp1 NA18960.hp1 NA18990.hp1 NA18992.hp2 NA19075.hp2 NA19081.hp2 NA19087.hp2	intron_variant	MODIFIER	c.411+86G>A c.411+86G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	2/2	chr4	110621078
chr4:110621378	G G	A A	1	a0001c0001t0013g0038 a0001c0001t0013g0038	1	HG02109.hp2 HG02109.hp2	intron_variant	MODIFIER	c.206-9C>T c.206-9C>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621378
chr4:110621417	C C	A A	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	HG02257.hp2 HG02257.hp2	intron_variant	MODIFIER	c.206-48G>T c.206-48G>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621417
chr4:110621423	C C	T T	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	NA18970.hp2 NA18970.hp2	intron_variant	MODIFIER	c.206-54G>A c.206-54G>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621423
chr4:110621431	G G	T T	6	a0001c0001t0001g0008 a0001c0001t0001g0025 a0001c0001t0001g0030 others(3): Show a0001c0001t0001g0008 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0004g0057 a0001c0001t0005g0019 a0001c0001t0005g0029	20	HG01255.hp2 HG02257.hp1 HG02280.hp2 others(17): Show HG01255.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02717.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03098.hp1 HG03139.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 HG03579.hp2	intron_variant	MODIFIER	c.206-62C>A c.206-62C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621431
chr4:110621542	G G	T T	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG02148.hp2 HG02148.hp2	intron_variant	MODIFIER	c.206-173C>A c.206-173C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621542
chr4:110621644	T T	C C	1	a0001c0001t0007g0039 a0001c0001t0007g0039	1	NA19057.hp2 NA19057.hp2	intron_variant	MODIFIER	c.206-275A>G c.206-275A>G	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621644
chr4:110621681	A A	G G	1	a0001c0001t0002g0014 a0001c0001t0002g0014	4	NA18952.hp2 NA19054.hp2 NA19058.hp2 others(1): Show NA18952.hp2 NA19054.hp2 NA19058.hp2 NA19068.hp1	intron_variant	MODIFIER	c.206-312T>C c.206-312T>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621681
chr4:110621697	G G	T T	20	a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0002g0002 others(17): Show a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0022 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0003g0004 a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0008g0020 a0001c0001t0009g0021 a0001c0001t0010g0023 a0001c0001t0012g0036 a0001c0001t0013g0038 a0001c0001t0014g0040 a0001c0003t0002g0018	145	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(142): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01891.hp1 HG01975.hp2 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02300.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18994.hp2 NA18998.hp2 NA19001.hp1 NA19002.hp2 NA19003.hp2 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.206-328C>A c.206-328C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621697
chr4:110621821	C C	CA CA	7	a0001c0001t0001g0030 a0001c0001t0001g0042 a0001c0001t0001g0055 others(4): Show a0001c0001t0001g0030 a0001c0001t0001g0042 a0001c0001t0001g0055 a0001c0001t0002g0006 a0001c0001t0002g0035 a0001c0001t0004g0058 a0001c0001t0008g0020	20	HG02055.hp2 HG02738.hp1 HG02818.hp2 others(17): Show HG02055.hp2 HG02738.hp1 HG02818.hp2 HG03098.hp1 HG03195.hp2 HG03471.hp1 HG03942.hp1 HG04115.hp2 HG04228.hp1 NA18945.hp2 NA18947.hp1 NA18971.hp1 NA18980.hp2 NA19012.hp1 NA19043.hp1 NA19064.hp2 NA19082.hp1 NA19084.hp1 NA19086.hp1 NA19091.hp2	intron_variant	MODIFIER	c.205+434dupT c.205+434dupT	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621821
chr4:110621821	CA CA	C C	25	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0009 others(22): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0002g0032 a0001c0001t0004g0012 a0001c0001t0006g0015 a0001c0001t0007g0024 a0001c0001t0007g0039 a0001c0001t0015g0056 a0001c0002t0001g0027 a0001c0002t0011g0031 a0001c0004t0001g0047	229	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(226): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03139.hp1 HG03195.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp2 NA18945.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp1 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19060.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp2 NA19067.hp1 NA19070.hp1 NA19074.hp1 NA19075.hp2 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+434delT c.205+434delT	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621821
chr4:110621887	G G	C C	1	a0001c0003t0002g0018 a0001c0003t0002g0018	3	HG01069.hp1 HG01071.hp2 HG01099.hp2 HG01069.hp1 HG01071.hp2 HG01099.hp2	intron_variant	MODIFIER	c.205+369C>G c.205+369C>G	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110621887
chr4:110622013	C C	A A	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.205+243G>T c.205+243G>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110622013
chr4:110622014	G G	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG02965.hp2 HG03453.hp2 HG02965.hp2 HG03453.hp2	intron_variant	MODIFIER	c.205+242C>A c.205+242C>A	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110622014
chr4:110622167	C C	A A	1	a0001c0001t0013g0038 a0001c0001t0013g0038	1	HG02109.hp2 HG02109.hp2	intron_variant	MODIFIER	c.205+89G>T c.205+89G>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110622167
chr4:110622167	C C	G G	4	a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0041 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0041 a0001c0001t0001g0042	71	HG00280.hp2 HG00323.hp1 HG00423.hp2 others(68): Show HG00280.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG01070.hp2 HG01071.hp1 HG01123.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp2 HG01517.hp2 HG01934.hp1 HG01943.hp2 HG01981.hp1 HG01993.hp2 HG02040.hp2 HG02080.hp2 HG02132.hp2 HG02155.hp2 HG02293.hp1 HG02523.hp2 HG02602.hp1 HG02809.hp2 HG03017.hp2 HG03704.hp2 HG04115.hp2 NA18612.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18954.hp2 NA18957.hp1 NA18959.hp2 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18982.hp1 NA18988.hp2 NA18990.hp2 NA19002.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19064.hp1 NA19067.hp1 NA19070.hp1 NA19074.hp1 NA19077.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19086.hp2 NA19087.hp1 NA19091.hp1 NA20752.hp1	intron_variant	MODIFIER	c.205+89G>C c.205+89G>C	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110622167
chr4:110622185	T T	C C	7	a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0006 others(4): Show a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0008g0020 a0001c0001t0009g0021 a0001c0001t0012g0036 a0001c0001t0014g0040	93	HG00099.hp1 HG00140.hp1 HG00423.hp1 others(90): Show HG00099.hp1 HG00140.hp1 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02155.hp1 HG02300.hp2 HG02602.hp2 HG02698.hp1 HG02738.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp1 NA18971.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18998.hp2 NA19001.hp1 NA19003.hp2 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.205+71A>G c.205+71A>G	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110622185
chr4:110622215	C C	A A	1	a0001c0001t0003g0037 a0001c0001t0003g0037	1	HG01109.hp1 HG01109.hp1	intron_variant	MODIFIER	c.205+41G>T c.205+41G>T	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding	1/2	chr4	110622215

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JoGo Local Haplotype Explorer (on iGV) PITX2_chr4_110612423_110628077

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 15)

GGenebody Level Haplotype Info (Total: 58)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 18)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 58)

Haplotype Details by Sample (Haploid Level) (Total: 422)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 13)

GGenebody Level Haplotype Variants (Intron) (Total: 40)

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Annotation (Repeats)

Annotation (SNP Array)