Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	7803
ensemblid	ENSG00000112245.13
hgncid	9634
symbol	PTP4A1
name	protein tyrosine phosphatase 4A1
refseq_nuc	NM_003463.5
refseq_prot	NP_003454.1
ensembl_nuc	ENST00000626021.3
ensembl_prot	ENSP00000485687.1
mane_status	MANE Select
chr	chr6
start	63572480
end	63583588
strand	+
ver	v1.2
region	chr6:63572480-63583588
region5000	chr6:63567480-63588588
regionname0	PTP4A1_chr6_63572480_63583588
regionname5000	PTP4A1_chr6_63567480_63588588

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	173	360	88	64	152	14	40	116	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	522	340	73	63	150	14	38	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
c0002	0/0	522	10	6	1	1	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
c0003	0/0	522	7	7	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
c0004	0/0	522	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
c0005	0/0	522	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
c0006	0/0	522	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	4100	217	46	51	79	11	28	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0002	0/0	4099	53	3	6	41	2	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0003	0/0	4101	10	0	0	10	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0004	0/0	4100	10	10	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0005	0/0	4100	5	0	0	5	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0006	0/0	4100	5	1	1	1	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0007	0/0	4100	5	0	3	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0008	0/0	4098	4	4	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0009	0/0	4100	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0010	0/0	4096	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0011	0/0	4101	3	0	0	3	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0012	0/0	4100	3	0	0	3	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0013	0/0	4100	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0014	0/0	4101	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0015	0/0	4100	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0016	0/0	4100	2	0	1	0	1	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0017	0/0	4100	2	1	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0018	0/0	4100	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0019	0/0	4100	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0020	0/0	4100	2	0	0	2	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0021	0/0	4100	2	0	0	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0022	0/0	4100	2	0	0	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0023	0/0	4100	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0024	0/0	4098	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0025	0/0	4100	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0026	0/0	4100	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0027	0/0	4100	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0028	0/0	4098	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0029	0/0	4100	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0030	0/0	4100	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0031	0/0	4100	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0032	0/0	4100	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0033	0/0	4100	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0034	0/0	4101	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0035	0/0	4100	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0036	0/0	4100	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0037	0/0	4100	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0038	0/0	4118	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
t0039	0/0	4099	1	0	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	122	7	23	68	7	16	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0002	0/1	74	17	22	20	5	9	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0003	0/0	43	2	7	28	2	4	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0004	0/0	32	19	4	7	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0005	0/0	14	10	1	1	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0006	0/0	13	0	0	13	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0007	0/0	9	1	2	4	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0008	0/0	7	7	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0009	0/0	6	6	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0010	0/0	4	4	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0011	0/0	3	0	3	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0012	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0013	0/0	2	1	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0014	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0015	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0016	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0017	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0018	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0019	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0020	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0021	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0022	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0023	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0024	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0025	0/0	1	0	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0026	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0027	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0028	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0029	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0030	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0031	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0032	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0033	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0034	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0035	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0036	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0037	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0038	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0039	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
g0040	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	522	340	73	63	150	14	38	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0002	0/0	522	10	6	1	1	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0003	0/0	522	7	7	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0004	0/0	522	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0005	0/0	522	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0006	0/0	522	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	4621	215	44	51	79	11	28	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0002	0/0	4620	53	3	6	41	2	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0003	0/0	4622	10	0	0	10	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0004	0/0	4621	10	10	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0005	0/0	4621	5	0	0	5	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0006	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0007	0/0	4621	5	0	3	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0008	0/0	4619	4	4	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0011	0/0	4622	2	0	0	2	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0012	0/0	4621	3	0	0	3	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0013	0/0	4621	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0016	0/0	4621	2	0	1	0	1	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0017	0/0	4621	2	1	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0019	0/0	4621	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0020	0/0	4621	2	0	0	2	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0021	0/0	4621	2	0	0	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0022	0/0	4621	2	0	0	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0023	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0024	0/0	4619	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0025	0/0	4621	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0026	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0027	0/0	4621	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0028	0/0	4619	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0029	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0030	0/0	4621	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0031	0/0	4621	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0032	0/0	4621	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0033	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0034	0/0	4622	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0035	0/0	4621	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0036	0/0	4621	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0037	0/0	4621	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0038	0/0	4639	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0001t0039	0/0	4620	1	0	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0002t0006	0/0	4621	4	0	1	1	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0002t0010	0/0	4617	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0002t0014	0/0	4622	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0003t0009	0/0	4621	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0003t0015	0/0	4621	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0003t0018	0/0	4621	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0004t0011	0/0	4622	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0005t0001	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588
a0001c0006t0001	0/0	4621	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	copy fasta	chr6	63567480	63588588

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	99	4	22	52	6	14	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0002	0/1	69	16	22	16	5	9	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0004	0/0	6	5	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0007	0/0	9	1	2	4	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0008	0/0	7	7	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0009	0/0	6	6	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0011	0/0	3	0	3	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0014	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0016	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0020	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0021	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0022	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0023	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0024	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0025	0/0	1	0	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0028	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0029	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0037	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0002g0003	0/0	37	2	6	26	2	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0002g0006	0/0	13	0	0	13	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0002g0019	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0002g0034	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0002g0035	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0003g0001	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0003g0002	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0003g0004	0/0	7	0	0	7	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0003g0039	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0004g0004	0/0	10	10	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0005g0001	0/0	5	0	0	5	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0006g0031	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0007g0004	0/0	4	0	3	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0007g0038	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0008g0010	0/0	4	4	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0011g0001	0/0	2	0	0	2	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0012g0001	0/0	3	0	0	3	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0013g0001	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0013g0012	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0016g0001	0/0	2	0	1	0	1	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0017g0013	0/0	2	1	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0019g0004	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0020g0001	0/0	2	0	0	2	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0021g0003	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0021g0018	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0022g0003	0/0	2	0	0	0	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0023g0001	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0024g0003	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0025g0001	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0026g0036	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0027g0002	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0028g0003	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0029g0002	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0030g0001	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0031g0002	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0032g0004	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0033g0001	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0034g0004	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0035g0001	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0036g0017	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0037g0001	0/0	1	0	0	0	0	1	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0038g0002	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0001t0039g0003	0/0	1	0	1	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0002t0006g0005	0/0	4	0	1	1	0	2	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0002t0010g0005	0/0	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0002t0014g0005	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0002t0014g0033	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0003t0009g0005	0/0	3	3	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0003t0015g0026	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0003t0015g0027	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0003t0018g0005	0/0	2	2	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0004t0011g0001	0/0	1	0	0	1	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0005t0001g0032	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
a0001c0006t0001g0004	0/0	1	1	0	0	0	0	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00140	hp2	a0001	c0001	t0002	g0003	EUR	GBR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00280	hp1	a0001	c0001	t0002	g0003	EUR	FIN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00280	hp2	a0001	c0001	t0016	g0001	EUR	FIN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00544	hp2	a0001	c0001	t0002	g0006	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00558	hp1	a0001	c0001	t0001	g0002	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00558	hp2	a0001	c0001	t0001	g0002	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00597	hp1	a0001	c0001	t0002	g0006	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00597	hp2	a0001	c0001	t0001	g0002	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00609	hp2	a0001	c0001	t0002	g0003	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00639	hp1	a0001	c0002	t0006	g0005	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00639	hp2	a0001	c0001	t0002	g0003	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00642	hp2	a0001	c0001	t0016	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00673	hp2	a0001	c0001	t0001	g0002	EAS	CHS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00733	hp2	a0001	c0001	t0002	g0003	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00735	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00738	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00741	hp1	a0001	c0001	t0001	g0011	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG00741	hp2	a0001	c0001	t0001	g0011	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01099	hp1	a0001	c0001	t0001	g0007	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01099	hp2	a0001	c0001	t0001	g0007	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01106	hp1	a0001	c0001	t0007	g0004	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01109	hp1	a0001	c0001	t0001	g0004	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01109	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01169	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01169	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01175	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01175	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01192	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01257	hp2	a0001	c0001	t0002	g0003	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01258	hp2	a0001	c0001	t0001	g0002	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01346	hp1	a0001	c0001	t0001	g0025	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01358	hp1	a0001	c0001	t0017	g0013	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01433	hp1	a0001	c0001	t0001	g0011	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01496	hp2	a0001	c0001	t0002	g0003	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01515	hp1	a0001	c0001	t0001	g0002	EUR	IBS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01515	hp2	a0001	c0001	t0001	g0002	EUR	IBS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01516	hp1	a0001	c0001	t0001	g0002	EUR	IBS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01884	hp1	a0001	c0001	t0004	g0004	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01884	hp2	a0001	c0001	t0001	g0008	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01891	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01891	hp2	a0001	c0001	t0001	g0002	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01928	hp1	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01928	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01934	hp2	a0001	c0001	t0039	g0003	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01943	hp2	a0001	c0001	t0002	g0003	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01952	hp2	a0001	c0001	t0007	g0004	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02027	hp2	a0001	c0001	t0002	g0003	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02056	hp1	a0001	c0001	t0031	g0002	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02071	hp1	a0001	c0001	t0001	g0002	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02074	hp2	a0001	c0001	t0003	g0004	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02129	hp1	a0001	c0001	t0036	g0017	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02132	hp1	a0001	c0002	t0006	g0005	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02135	hp1	a0001	c0001	t0003	g0004	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02135	hp2	a0001	c0001	t0001	g0029	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02145	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02145	hp2	a0001	c0001	t0008	g0010	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02155	hp1	a0001	c0001	t0002	g0003	EAS	CDX	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02165	hp1	a0001	c0001	t0001	g0030	EAS	CDX	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02257	hp1	a0001	c0001	t0017	g0013	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02257	hp2	a0001	c0001	t0001	g0009	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02258	hp1	a0001	c0001	t0001	g0008	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02258	hp2	a0001	c0001	t0008	g0010	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02273	hp1	a0001	c0001	t0002	g0003	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02273	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02280	hp1	a0001	c0001	t0013	g0012	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02280	hp2	a0001	c0003	t0015	g0027	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02293	hp1	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02293	hp2	a0001	c0001	t0007	g0004	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02300	hp1	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02300	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02451	hp1	a0001	c0001	t0034	g0004	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02451	hp2	a0001	c0001	t0002	g0003	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02523	hp2	a0001	c0001	t0002	g0003	EAS	KHV	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02615	hp1	a0001	c0001	t0001	g0015	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02615	hp2	a0001	c0001	t0008	g0010	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02622	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02622	hp2	a0001	c0001	t0001	g0014	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02630	hp1	a0001	c0001	t0004	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02630	hp2	a0001	c0001	t0001	g0009	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02647	hp1	a0001	c0001	t0001	g0015	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02647	hp2	a0001	c0002	t0010	g0005	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02683	hp1	a0001	c0001	t0002	g0003	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02698	hp1	a0001	c0001	t0001	g0016	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02717	hp1	a0001	c0003	t0009	g0005	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02717	hp2	a0001	c0001	t0013	g0012	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02735	hp2	a0001	c0002	t0006	g0005	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02738	hp2	a0001	c0001	t0001	g0007	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02809	hp1	a0001	c0001	t0004	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02809	hp2	a0001	c0001	t0001	g0002	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02818	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02818	hp2	a0001	c0003	t0015	g0026	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02886	hp1	a0001	c0001	t0008	g0010	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02886	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02895	hp1	a0001	c0001	t0019	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02895	hp2	a0001	c0001	t0001	g0037	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02896	hp1	a0001	c0001	t0001	g0009	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02896	hp2	a0001	c0001	t0004	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02897	hp1	a0001	c0001	t0001	g0009	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02897	hp2	a0001	c0001	t0019	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02922	hp1	a0001	c0001	t0001	g0002	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02922	hp2	a0001	c0001	t0001	g0008	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02965	hp1	a0001	c0001	t0001	g0008	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02965	hp2	a0001	c0001	t0001	g0002	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02970	hp1	a0001	c0001	t0001	g0008	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02970	hp2	a0001	c0001	t0001	g0009	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02976	hp1	a0001	c0001	t0001	g0008	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02976	hp2	a0001	c0001	t0001	g0002	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03017	hp1	a0001	c0001	t0007	g0004	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03017	hp2	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03041	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03041	hp2	a0001	c0005	t0001	g0032	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03098	hp2	a0001	c0001	t0004	g0004	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03139	hp1	a0001	c0001	t0001	g0009	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03139	hp2	a0001	c0001	t0001	g0002	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03195	hp1	a0001	c0001	t0004	g0004	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03195	hp2	a0001	c0001	t0002	g0034	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03209	hp1	a0001	c0001	t0001	g0004	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03209	hp2	a0001	c0002	t0010	g0005	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03225	hp1	a0001	c0001	t0013	g0001	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03225	hp2	a0001	c0001	t0001	g0014	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03239	hp1	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03453	hp1	a0001	c0001	t0033	g0001	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03453	hp2	a0001	c0001	t0001	g0007	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03486	hp2	a0001	c0001	t0004	g0004	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03490	hp1	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03490	hp2	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03491	hp2	a0001	c0001	t0022	g0003	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03492	hp1	a0001	c0001	t0022	g0003	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03516	hp1	a0001	c0002	t0014	g0005	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03540	hp2	a0001	c0001	t0023	g0001	AFR	GWD	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03579	hp1	a0001	c0001	t0004	g0004	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03579	hp2	a0001	c0002	t0014	g0005	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03669	hp1	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03669	hp2	a0001	c0001	t0037	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03688	hp1	a0001	c0001	t0021	g0018	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03704	hp1	a0001	c0001	t0001	g0002	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03704	hp2	a0001	c0001	t0021	g0003	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03710	hp2	a0001	c0001	t0001	g0022	SAS	PJL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03831	hp1	a0001	c0001	t0001	g0024	SAS	BEB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03831	hp2	a0001	c0001	t0035	g0001	SAS	BEB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03942	hp2	a0001	c0001	t0007	g0038	SAS	BEB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG04199	hp1	a0001	c0001	t0001	g0007	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG04199	hp2	a0001	c0001	t0001	g0002	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG04228	hp1	a0001	c0001	t0001	g0002	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG04228	hp2	a0001	c0002	t0006	g0005	SAS	STU	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18522	hp1	a0001	c0001	t0001	g0008	AFR	YRI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18522	hp2	a0001	c0002	t0010	g0005	AFR	YRI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18747	hp1	a0001	c0001	t0003	g0004	EAS	CHB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18939	hp1	a0001	c0001	t0001	g0028	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18941	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18941	hp2	a0001	c0001	t0001	g0007	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18942	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18943	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18945	hp2	a0001	c0001	t0001	g0021	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18947	hp1	a0001	c0001	t0001	g0020	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18947	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18948	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18948	hp2	a0001	c0001	t0005	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18949	hp1	a0001	c0001	t0024	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18949	hp2	a0001	c0001	t0003	g0004	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18956	hp1	a0001	c0001	t0028	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18957	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18957	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18960	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18961	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18961	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18962	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18964	hp1	a0001	c0001	t0025	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18964	hp2	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18969	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18969	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18970	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18970	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18973	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18975	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18977	hp2	a0001	c0001	t0030	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18978	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18978	hp2	a0001	c0001	t0038	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18979	hp2	a0001	c0001	t0002	g0019	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18980	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18980	hp2	a0001	c0001	t0003	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18981	hp1	a0001	c0001	t0003	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18981	hp2	a0001	c0001	t0003	g0004	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18983	hp2	a0001	c0001	t0001	g0007	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18986	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18991	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18994	hp1	a0001	c0001	t0020	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA18994	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19000	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19000	hp2	a0001	c0001	t0011	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19002	hp1	a0001	c0001	t0012	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19002	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19003	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19004	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19004	hp2	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19007	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19007	hp2	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19009	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19009	hp2	a0001	c0001	t0005	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19010	hp2	a0001	c0001	t0027	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19011	hp1	a0001	c0001	t0005	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19012	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19043	hp1	a0001	c0001	t0001	g0002	AFR	LWK	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19043	hp2	a0001	c0001	t0026	g0036	AFR	LWK	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19054	hp1	a0001	c0004	t0011	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19054	hp2	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19055	hp2	a0001	c0001	t0002	g0035	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19058	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19058	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19060	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19062	hp2	a0001	c0001	t0003	g0039	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19063	hp1	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19063	hp2	a0001	c0001	t0012	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19064	hp1	a0001	c0001	t0003	g0004	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19064	hp2	a0001	c0001	t0012	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19065	hp2	a0001	c0001	t0020	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19066	hp1	a0001	c0001	t0005	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19068	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19068	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19070	hp1	a0001	c0001	t0001	g0023	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19074	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19075	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19077	hp2	a0001	c0001	t0003	g0004	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19081	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19082	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19083	hp1	a0001	c0001	t0001	g0040	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19083	hp2	a0001	c0001	t0005	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19084	hp2	a0001	c0001	t0002	g0003	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19091	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19091	hp2	a0001	c0001	t0011	g0001	EAS	JPT	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19240	hp1	a0001	c0001	t0004	g0004	AFR	YRI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA19240	hp2	a0001	c0001	t0002	g0003	AFR	YRI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20129	hp1	a0001	c0001	t0001	g0002	AFR	ASW	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20129	hp2	a0001	c0001	t0006	g0031	AFR	ASW	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20905	hp1	a0001	c0001	t0032	g0004	SAS	GIH	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG01123	hp2	a0001	c0001	t0001	g0002	AMR	CLM	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02109	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02109	hp2	a0001	c0001	t0001	g0002	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02486	hp2	a0001	c0003	t0009	g0005	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02559	hp1	a0001	c0003	t0018	g0005	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG02559	hp2	a0001	c0003	t0009	g0005	AFR	ACB	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03471	hp1	a0001	c0001	t0029	g0002	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG03471	hp2	a0001	c0001	t0001	g0002	AFR	MSL	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG06807	hp1	a0001	c0002	t0014	g0033	AFR	USA	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
HG06807	hp2	a0001	c0003	t0018	g0005	AFR	USA	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20300	hp1	a0001	c0001	t0004	g0004	AFR	USA	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA20300	hp2	a0001	c0001	t0001	g0002	AFR	USA	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA21309	hp1	a0001	c0006	t0001	g0004	AFR	LWK	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	PTP4A1_chr6_63567480_63588588	PTP4A1	chr6	63567480	63588588

view	chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr6:63576946	A A	G G	1	a0001c0006 a0001c0006	1	NA21309.hp1 NA21309.hp1	synonymous_variant	LOW	c.66A>G c.66A>G	p.Thr22Thr p.Thr22Thr	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/6	751/4621	66/522	22/173	chr6	63576946
chr6:63578490	T T	C C	1	a0001c0004 a0001c0004	1	NA19054.hp1 NA19054.hp1	synonymous_variant	LOW	c.159T>C c.159T>C	p.Tyr53Tyr p.Tyr53Tyr	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	3/6	844/4621	159/522	53/173	chr6	63578490
chr6:63578927	A A	G G	1	a0001c0002 a0001c0002	10	HG00639.hp1 HG02132.hp1 HG02647.hp2 others(7): Show HG00639.hp1 HG02132.hp1 HG02647.hp2 HG02735.hp2 HG03209.hp2 HG03516.hp1 HG03579.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp2	synonymous_variant	LOW	c.228A>G c.228A>G	p.Pro76Pro p.Pro76Pro	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	4/6	913/4621	228/522	76/173	chr6	63578927
chr6:63580063	G G	T T	1	a0001c0003 a0001c0003	7	HG02280.hp2 HG02486.hp2 HG02559.hp1 others(4): Show HG02280.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02818.hp2 HG06807.hp2	synonymous_variant	LOW	c.411G>T c.411G>T	p.Arg137Arg p.Arg137Arg	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1096/4621	411/522	137/173	chr6	63580063
chr6:63580091	C C	T T	2	a0001c0003 a0001c0005 a0001c0003 a0001c0005	8	HG02280.hp2 HG02486.hp2 HG02559.hp1 others(5): Show HG02280.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02818.hp2 HG03041.hp2 HG06807.hp2	synonymous_variant	LOW	c.439C>T c.439C>T	p.Leu147Leu p.Leu147Leu	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1124/4621	439/522	147/173	chr6	63580091

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr6:63572537	T T	C C	1	a0001c0001t0023 a0001c0001t0023	1	HG03540.hp2 HG03540.hp2	5_prime_UTR_variant	MODIFIER	c.-628T>C c.-628T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/6	4344		chr6	63572537
chr6:63572545	G G	T T	1	a0001c0001t0039 a0001c0001t0039	1	HG01934.hp2 HG01934.hp2	5_prime_UTR_variant	MODIFIER	c.-620G>T c.-620G>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/6	4336		chr6	63572545
chr6:63572572	C C	CCCGCCGC others(11): Show CCCGCCGCCGCCTGCATCG	1	a0001c0001t0038 a0001c0001t0038	1	NA18978.hp2 NA18978.hp2	5_prime_UTR_variant	MODIFIER	c.-587_-570dupGCCGCC others(12): Show c.-587_-570dupGCCGCCTGCATCGCCGCC	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/6	4285	INFO_REALIGN_3_PRIME	chr6	63572572
chr6:63572674	C C	T T	1	a0001c0001t0037 a0001c0001t0037	1	HG03669.hp2 HG03669.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-491C>T c.-491C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/6			chr6	63572674
chr6:63576616	A A	G G	1	a0001c0001t0036 a0001c0001t0036	1	HG02129.hp1 HG02129.hp1	5_prime_UTR_variant	MODIFIER	c.-265A>G c.-265A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/6	265		chr6	63576616
chr6:63576799	C C	T T	1	a0001c0001t0035 a0001c0001t0035	1	HG03831.hp2 HG03831.hp2	5_prime_UTR_variant	MODIFIER	c.-82C>T c.-82C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/6	82		chr6	63576799
chr6:63580273	T T	A A	1	a0001c0001t0024 a0001c0001t0024	1	NA18949.hp1 NA18949.hp1	3_prime_UTR_variant	MODIFIER	c.99T>A c.99T>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	99		chr6	63580273
chr6:63580332	C C	T T	1	a0001c0001t0004 a0001c0001t0004	10	HG01884.hp1 HG02630.hp1 HG02809.hp1 others(7): Show HG01884.hp1 HG02630.hp1 HG02809.hp1 HG02896.hp2 HG03098.hp2 HG03195.hp1 HG03486.hp2 HG03579.hp1 NA19240.hp1 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.158C>T c.158C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	158		chr6	63580332
chr6:63580421	A A	G G	1	a0001c0001t0008 a0001c0001t0008	4	HG02145.hp2 HG02258.hp2 HG02615.hp2 others(1): Show HG02145.hp2 HG02258.hp2 HG02615.hp2 HG02886.hp1	3_prime_UTR_variant	MODIFIER	c.247A>G c.247A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	247		chr6	63580421
chr6:63580728	A A	AT AT	7	a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 a0001c0001t0022 a0001c0001t0034 a0001c0001t0039 a0001c0002t0014	72	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(69): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02074.hp2 HG02135.hp1 HG02155.hp1 HG02273.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02683.hp1 HG03195.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG06807.hp1 NA18747.hp1 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.569dupT c.569dupT	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	570	INFO_REALIGN_3_PRIME	chr6	63580728
chr6:63580799	A A	G G	2	a0001c0001t0013 a0001c0001t0033 a0001c0001t0013 a0001c0001t0033	4	HG02280.hp1 HG02717.hp2 HG03225.hp1 others(1): Show HG02280.hp1 HG02717.hp2 HG03225.hp1 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.625A>G c.625A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	625		chr6	63580799
chr6:63581051	A A	T T	1	a0001c0001t0020 a0001c0001t0020	2	NA18994.hp1 NA19065.hp2 NA18994.hp1 NA19065.hp2	3_prime_UTR_variant	MODIFIER	c.877A>T c.877A>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	877		chr6	63581051
chr6:63581183	T T	C C	1	a0001c0001t0025 a0001c0001t0025	1	NA18964.hp1 NA18964.hp1	3_prime_UTR_variant	MODIFIER	c.1009T>C c.1009T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1009		chr6	63581183
chr6:63581248	A A	T T	2	a0001c0001t0007 a0001c0001t0032 a0001c0001t0007 a0001c0001t0032	6	HG01106.hp1 HG01952.hp2 HG02293.hp2 others(3): Show HG01106.hp1 HG01952.hp2 HG02293.hp2 HG03017.hp1 HG03942.hp2 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.1074A>T c.1074A>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1074		chr6	63581248
chr6:63581512	C C	T T	1	a0001c0001t0031 a0001c0001t0031	1	HG02056.hp1 HG02056.hp1	3_prime_UTR_variant	MODIFIER	c.1338C>T c.1338C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1338		chr6	63581512
chr6:63581532	C C	T T	1	a0001c0001t0019 a0001c0001t0019	2	HG02895.hp1 HG02897.hp2 HG02895.hp1 HG02897.hp2	3_prime_UTR_variant	MODIFIER	c.1358C>T c.1358C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1358		chr6	63581532
chr6:63581775	T T	C C	1	a0001c0003t0015 a0001c0003t0015	2	HG02280.hp2 HG02818.hp2 HG02280.hp2 HG02818.hp2	3_prime_UTR_variant	MODIFIER	c.1601T>C c.1601T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1601		chr6	63581775
chr6:63581854	T T	G G	1	a0001c0001t0024 a0001c0001t0024	1	NA18949.hp1 NA18949.hp1	3_prime_UTR_variant	MODIFIER	c.1680T>G c.1680T>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1680		chr6	63581854
chr6:63581899	A A	G G	1	a0001c0001t0012 a0001c0001t0012	3	NA19002.hp1 NA19063.hp2 NA19064.hp2 NA19002.hp1 NA19063.hp2 NA19064.hp2	3_prime_UTR_variant	MODIFIER	c.1725A>G c.1725A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1725		chr6	63581899
chr6:63582106	G G	A A	1	a0001c0001t0026 a0001c0001t0026	1	NA19043.hp2 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.1932G>A c.1932G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1932		chr6	63582106
chr6:63582137	G G	A A	1	a0001c0001t0027 a0001c0001t0027	1	NA19010.hp2 NA19010.hp2	3_prime_UTR_variant	MODIFIER	c.1963G>A c.1963G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	1963		chr6	63582137
chr6:63582192	G G	GT GT	4	a0001c0001t0011 a0001c0001t0021 a0001c0001t0022 others(1): Show a0001c0001t0011 a0001c0001t0021 a0001c0001t0022 a0001c0004t0011	7	HG03491.hp2 HG03492.hp1 HG03688.hp1 others(4): Show HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 NA19000.hp2 NA19054.hp1 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.2028dupT c.2028dupT	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2029	INFO_REALIGN_3_PRIME	chr6	63582192
chr6:63582224	TGA TGA	T T	7	a0001c0001t0002 a0001c0001t0008 a0001c0001t0021 others(4): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0028 a0001c0001t0039	64	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(61): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02273.hp1 HG02451.hp2 HG02523.hp2 HG02615.hp2 HG02683.hp1 HG02886.hp1 HG03195.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.2053_2054delGA c.2053_2054delGA	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2053	INFO_REALIGN_3_PRIME	chr6	63582224
chr6:63582248	A A	G G	14	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 others(11): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0028 a0001c0001t0039 a0001c0002t0006 a0001c0002t0010 a0001c0002t0014 a0001c0003t0009 a0001c0003t0015 a0001c0003t0018	82	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(79): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02818.hp2 HG02886.hp1 HG03195.hp2 HG03209.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.2074A>G c.2074A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2074		chr6	63582248
chr6:63582303	TGAGA TGAGA	T T	1	a0001c0002t0010 a0001c0002t0010	3	HG02647.hp2 HG03209.hp2 NA18522.hp2 HG02647.hp2 HG03209.hp2 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.2135_2138delAGAG c.2135_2138delAGAG	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2135	INFO_REALIGN_3_PRIME	chr6	63582303
chr6:63582342	C C	A A	1	a0001c0001t0029 a0001c0001t0029	1	HG03471.hp1 HG03471.hp1	3_prime_UTR_variant	MODIFIER	c.2168C>A c.2168C>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2168		chr6	63582342
chr6:63582654	G G	A A	1	a0001c0001t0016 a0001c0001t0016	2	HG00280.hp2 HG00642.hp2 HG00280.hp2 HG00642.hp2	3_prime_UTR_variant	MODIFIER	c.2480G>A c.2480G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2480		chr6	63582654
chr6:63582676	T T	C C	1	a0001c0001t0026 a0001c0001t0026	1	NA19043.hp2 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.2502T>C c.2502T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2502		chr6	63582676
chr6:63582678	G G	A A	1	a0001c0001t0005 a0001c0001t0005	5	NA18948.hp2 NA19009.hp2 NA19011.hp1 others(2): Show NA18948.hp2 NA19009.hp2 NA19011.hp1 NA19066.hp1 NA19083.hp2	3_prime_UTR_variant	MODIFIER	c.2504G>A c.2504G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2504		chr6	63582678
chr6:63582751	A A	G G	1	a0001c0001t0032 a0001c0001t0032	1	NA20905.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.2577A>G c.2577A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2577		chr6	63582751
chr6:63582782	T T	C C	4	a0001c0001t0006 a0001c0002t0006 a0001c0002t0010 others(1): Show a0001c0001t0006 a0001c0002t0006 a0001c0002t0010 a0001c0002t0014	11	HG00639.hp1 HG02132.hp1 HG02647.hp2 others(8): Show HG00639.hp1 HG02132.hp1 HG02647.hp2 HG02735.hp2 HG03209.hp2 HG03516.hp1 HG03579.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.2608T>C c.2608T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2608		chr6	63582782
chr6:63582790	A A	G G	1	a0001c0001t0022 a0001c0001t0022	2	HG03491.hp2 HG03492.hp1 HG03491.hp2 HG03492.hp1	3_prime_UTR_variant	MODIFIER	c.2616A>G c.2616A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2616		chr6	63582790
chr6:63582897	A A	C C	1	a0001c0001t0030 a0001c0001t0030	1	NA18977.hp2 NA18977.hp2	3_prime_UTR_variant	MODIFIER	c.2723A>C c.2723A>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2723		chr6	63582897
chr6:63583105	G G	A A	6	a0001c0001t0002 a0001c0001t0021 a0001c0001t0022 others(3): Show a0001c0001t0002 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0028 a0001c0001t0039	60	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(57): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02155.hp1 HG02273.hp1 HG02451.hp2 HG02523.hp2 HG02683.hp1 HG03195.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.2931G>A c.2931G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	2931		chr6	63583105
chr6:63583279	A A	G G	1	a0001c0001t0034 a0001c0001t0034	1	HG02451.hp1 HG02451.hp1	3_prime_UTR_variant	MODIFIER	c.3105A>G c.3105A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	3105		chr6	63583279
chr6:63583281	G G	A A	1	a0001c0001t0033 a0001c0001t0033	1	HG03453.hp1 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.3107G>A c.3107G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	3107		chr6	63583281
chr6:63583330	A A	G G	1	a0001c0001t0017 a0001c0001t0017	2	HG01358.hp1 HG02257.hp1 HG01358.hp1 HG02257.hp1	3_prime_UTR_variant	MODIFIER	c.3156A>G c.3156A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	3156		chr6	63583330
chr6:63583389	A A	T T	1	a0001c0003t0018 a0001c0003t0018	2	HG02559.hp1 HG06807.hp2 HG02559.hp1 HG06807.hp2	3_prime_UTR_variant	MODIFIER	c.3215A>T c.3215A>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	3215		chr6	63583389
chr6:63583537	A A	C C	2	a0001c0001t0011 a0001c0004t0011 a0001c0001t0011 a0001c0004t0011	3	NA19000.hp2 NA19054.hp1 NA19091.hp2 NA19000.hp2 NA19054.hp1 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.3363A>C c.3363A>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	6/6	3363		chr6	63583537

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr6:63572862	C C	A A	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	HG02698.hp1 HG02698.hp1	intron_variant	MODIFIER	c.-446+143C>A c.-446+143C>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63572862
chr6:63572879	G G	A A	1	a0001c0001t0036g0017 a0001c0001t0036g0017	1	HG02129.hp1 HG02129.hp1	intron_variant	MODIFIER	c.-446+160G>A c.-446+160G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63572879
chr6:63573029	G G	A A	1	a0001c0001t0021g0018 a0001c0001t0021g0018	1	HG03688.hp1 HG03688.hp1	intron_variant	MODIFIER	c.-446+310G>A c.-446+310G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573029
chr6:63573357	C C	T T	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA19083.hp1 NA19083.hp1	intron_variant	MODIFIER	c.-446+638C>T c.-446+638C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573357
chr6:63573405	T T	C C	1	a0001c0001t0002g0019 a0001c0001t0002g0019	1	NA18979.hp2 NA18979.hp2	intron_variant	MODIFIER	c.-446+686T>C c.-446+686T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573405
chr6:63573456	G G	T T	1	a0001c0001t0003g0039 a0001c0001t0003g0039	1	NA19062.hp2 NA19062.hp2	intron_variant	MODIFIER	c.-446+737G>T c.-446+737G>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573456
chr6:63573941	C C	T T	10	a0001c0001t0001g0004 a0001c0001t0001g0015 a0001c0001t0003g0004 others(7): Show a0001c0001t0001g0004 a0001c0001t0001g0015 a0001c0001t0003g0004 a0001c0001t0004g0004 a0001c0001t0007g0004 a0001c0001t0007g0038 a0001c0001t0019g0004 a0001c0001t0032g0004 a0001c0001t0034g0004 a0001c0006t0001g0004	35	HG01106.hp1 HG01109.hp1 HG01884.hp1 others(32): Show HG01106.hp1 HG01109.hp1 HG01884.hp1 HG01952.hp2 HG02074.hp2 HG02109.hp1 HG02135.hp1 HG02293.hp2 HG02451.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03195.hp1 HG03209.hp1 HG03486.hp2 HG03579.hp1 HG03942.hp2 NA18747.hp1 NA18949.hp2 NA18981.hp2 NA19064.hp1 NA19077.hp2 NA19240.hp1 NA20300.hp1 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-446+1222C>T c.-446+1222C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573941
chr6:63573942	C C	T T	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	HG02895.hp2 HG02895.hp2	intron_variant	MODIFIER	c.-446+1223C>T c.-446+1223C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573942
chr6:63573944	C C	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	NA18947.hp1 NA18947.hp1	intron_variant	MODIFIER	c.-446+1225C>A c.-446+1225C>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63573944
chr6:63574050	A A	C C	1	a0001c0001t0026g0036 a0001c0001t0026g0036	1	NA19043.hp2 NA19043.hp2	intron_variant	MODIFIER	c.-446+1331A>C c.-446+1331A>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574050
chr6:63574253	T T	G G	1	a0001c0001t0013g0012 a0001c0001t0013g0012	2	HG02280.hp1 HG02717.hp2 HG02280.hp1 HG02717.hp2	intron_variant	MODIFIER	c.-446+1534T>G c.-446+1534T>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574253
chr6:63574369	G G	GA GA	26	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 others(23): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0003g0002 a0001c0001t0003g0004 a0001c0001t0003g0039 a0001c0001t0004g0004 a0001c0001t0007g0004 a0001c0001t0007g0038 a0001c0001t0017g0013 a0001c0001t0019g0004 a0001c0001t0027g0002 a0001c0001t0029g0002 a0001c0001t0031g0002 a0001c0001t0032g0004 a0001c0001t0034g0004 a0001c0001t0036g0017 a0001c0001t0038g0002 a0001c0006t0001g0004	133	HG00323.hp2 HG00558.hp1 HG00558.hp2 others(130): Show HG00323.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01258.hp2 HG01358.hp1 HG01433.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02071.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp1 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp2 HG04199.hp2 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18945.hp2 NA18949.hp2 NA18964.hp2 NA18969.hp1 NA18970.hp1 NA18978.hp2 NA18981.hp1 NA18981.hp2 NA18986.hp2 NA19000.hp1 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19043.hp1 NA19054.hp2 NA19062.hp2 NA19064.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-446+1656dupA c.-446+1656dupA	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5	INFO_REALIGN_3_PRIME	chr6	63574369
chr6:63574674	AG AG	A A	1	a0001c0001t0002g0006 a0001c0001t0002g0006	13	HG00544.hp2 HG00597.hp1 NA18942.hp2 others(10): Show HG00544.hp2 HG00597.hp1 NA18942.hp2 NA18948.hp1 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA19058.hp1 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19091.hp1	intron_variant	MODIFIER	c.-445-1761delG c.-445-1761delG	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574674
chr6:63574677	T T	C C	1	a0001c0001t0002g0006 a0001c0001t0002g0006	13	HG00544.hp2 HG00597.hp1 NA18942.hp2 others(10): Show HG00544.hp2 HG00597.hp1 NA18942.hp2 NA18948.hp1 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA19058.hp1 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19091.hp1	intron_variant	MODIFIER	c.-445-1759T>C c.-445-1759T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574677
chr6:63574714	T T	G G	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA18945.hp2 NA18945.hp2	intron_variant	MODIFIER	c.-445-1722T>G c.-445-1722T>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574714
chr6:63574721	A A	G G	1	a0001c0001t0007g0038 a0001c0001t0007g0038	1	HG03942.hp2 HG03942.hp2	intron_variant	MODIFIER	c.-445-1715A>G c.-445-1715A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574721
chr6:63574788	T T	C C	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	HG01346.hp1 HG01346.hp1	intron_variant	MODIFIER	c.-445-1648T>C c.-445-1648T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574788
chr6:63574798	G G	A A	1	a0001c0001t0008g0010 a0001c0001t0008g0010	4	HG02145.hp2 HG02258.hp2 HG02615.hp2 others(1): Show HG02145.hp2 HG02258.hp2 HG02615.hp2 HG02886.hp1	intron_variant	MODIFIER	c.-445-1638G>A c.-445-1638G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63574798
chr6:63575030	A A	G G	11	a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 others(8): Show a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0021g0003 a0001c0001t0021g0018 a0001c0001t0022g0003 a0001c0001t0024g0003 a0001c0001t0028g0003 a0001c0001t0039g0003	60	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(57): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02155.hp1 HG02273.hp1 HG02451.hp2 HG02523.hp2 HG02683.hp1 HG03195.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2	intron_variant	MODIFIER	c.-445-1406A>G c.-445-1406A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575030
chr6:63575034	G G	C C	1	a0001c0001t0001g0014 a0001c0001t0001g0014	2	HG02622.hp2 HG03225.hp2 HG02622.hp2 HG03225.hp2	intron_variant	MODIFIER	c.-445-1402G>C c.-445-1402G>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575034
chr6:63575220	A A	G G	2	a0001c0001t0008g0010 a0001c0001t0017g0013 a0001c0001t0008g0010 a0001c0001t0017g0013	6	HG01358.hp1 HG02145.hp2 HG02257.hp1 others(3): Show HG01358.hp1 HG02145.hp2 HG02257.hp1 HG02258.hp2 HG02615.hp2 HG02886.hp1	intron_variant	MODIFIER	c.-445-1216A>G c.-445-1216A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575220
chr6:63575265	A A	C C	1	a0001c0001t0002g0035 a0001c0001t0002g0035	1	NA19055.hp2 NA19055.hp2	intron_variant	MODIFIER	c.-445-1171A>C c.-445-1171A>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575265
chr6:63575280	G G	A A	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	HG03710.hp2 HG03710.hp2	intron_variant	MODIFIER	c.-445-1156G>A c.-445-1156G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575280
chr6:63575796	T T	G G	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG02615.hp1 HG02647.hp1 HG02615.hp1 HG02647.hp1	intron_variant	MODIFIER	c.-445-640T>G c.-445-640T>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575796
chr6:63575902	G G	T T	1	a0001c0001t0008g0010 a0001c0001t0008g0010	4	HG02145.hp2 HG02258.hp2 HG02615.hp2 others(1): Show HG02145.hp2 HG02258.hp2 HG02615.hp2 HG02886.hp1	intron_variant	MODIFIER	c.-445-534G>T c.-445-534G>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63575902
chr6:63576045	A A	G G	1	a0001c0002t0014g0033 a0001c0002t0014g0033	1	HG06807.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-445-391A>G c.-445-391A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63576045
chr6:63576164	A A	G G	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.-445-272A>G c.-445-272A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	1/5		chr6	63576164
chr6:63577080	A A	G G	13	a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 others(10): Show a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0008g0010 a0001c0001t0017g0013 a0001c0001t0021g0003 a0001c0001t0021g0018 a0001c0001t0022g0003 a0001c0001t0024g0003 a0001c0001t0028g0003 a0001c0001t0039g0003	66	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(63): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01358.hp1 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02451.hp2 HG02523.hp2 HG02615.hp2 HG02683.hp1 HG02886.hp1 HG03195.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2	intron_variant	MODIFIER	c.105+95A>G c.105+95A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577080
chr6:63577120	A A	G G	1	a0001c0005t0001g0032 a0001c0005t0001g0032	1	HG03041.hp2 HG03041.hp2	intron_variant	MODIFIER	c.105+135A>G c.105+135A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577120
chr6:63577142	A A	G G	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.105+157A>G c.105+157A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577142
chr6:63577705	C C	T T	2	a0001c0001t0008g0010 a0001c0001t0017g0013 a0001c0001t0008g0010 a0001c0001t0017g0013	6	HG01358.hp1 HG02145.hp2 HG02257.hp1 others(3): Show HG01358.hp1 HG02145.hp2 HG02257.hp1 HG02258.hp2 HG02615.hp2 HG02886.hp1	intron_variant	MODIFIER	c.105+720C>T c.105+720C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577705
chr6:63577820	A A	C C	1	a0001c0001t0006g0031 a0001c0001t0006g0031	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.106-617A>C c.106-617A>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577820
chr6:63577858	C C	A A	1	a0001c0001t0026g0036 a0001c0001t0026g0036	1	NA19043.hp2 NA19043.hp2	intron_variant	MODIFIER	c.106-579C>A c.106-579C>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577858
chr6:63577924	G G	A A	2	a0001c0003t0015g0026 a0001c0003t0015g0027 a0001c0003t0015g0026 a0001c0003t0015g0027	2	HG02280.hp2 HG02818.hp2 HG02280.hp2 HG02818.hp2	intron_variant	MODIFIER	c.106-513G>A c.106-513G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577924
chr6:63577966	T T	C C	11	a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 others(8): Show a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0021g0003 a0001c0001t0021g0018 a0001c0001t0022g0003 a0001c0001t0024g0003 a0001c0001t0028g0003 a0001c0001t0039g0003	60	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(57): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02155.hp1 HG02273.hp1 HG02451.hp2 HG02523.hp2 HG02683.hp1 HG03195.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2	intron_variant	MODIFIER	c.106-471T>C c.106-471T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63577966
chr6:63577991	G G	GTATTT GTATTT	49	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(46): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0003g0002 a0001c0001t0003g0004 a0001c0001t0003g0039 a0001c0001t0004g0004 a0001c0001t0006g0031 a0001c0001t0007g0004 a0001c0001t0007g0038 a0001c0001t0008g0010 a0001c0001t0017g0013 a0001c0001t0019g0004 a0001c0001t0021g0003 a0001c0001t0021g0018 a0001c0001t0022g0003 a0001c0001t0024g0003 a0001c0001t0026g0036 a0001c0001t0027g0002 a0001c0001t0028g0003 a0001c0001t0029g0002 a0001c0001t0031g0002 a0001c0001t0032g0004 a0001c0001t0034g0004 a0001c0001t0036g0017 a0001c0001t0038g0002 a0001c0001t0039g0003 a0001c0002t0006g0005 a0001c0002t0010g0005 a0001c0002t0014g0005 a0001c0002t0014g0033 a0001c0003t0009g0005 a0001c0003t0015g0026 a0001c0003t0015g0027 a0001c0003t0018g0005 a0001c0005t0001g0032 a0001c0006t0001g0004	223	HG00140.hp2 HG00280.hp1 HG00323.hp2 others(220): Show HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02027.hp2 HG02056.hp1 HG02071.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp2 NA18975.hp1 NA18978.hp1 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp2 NA18994.hp2 NA19000.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.106-444_106-443ins others(5): Show c.106-444_106-443insTTTTA	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr6	63577991
chr6:63578044	G G	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	7	HG01884.hp2 HG02258.hp1 HG02922.hp2 others(4): Show HG01884.hp2 HG02258.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 NA18522.hp1	intron_variant	MODIFIER	c.106-393G>T c.106-393G>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63578044
chr6:63578083	G G	C C	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	NA18939.hp1 NA18939.hp1	intron_variant	MODIFIER	c.106-354G>C c.106-354G>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63578083
chr6:63578100	C C	T T	1	a0001c0005t0001g0032 a0001c0005t0001g0032	1	HG03041.hp2 HG03041.hp2	intron_variant	MODIFIER	c.106-337C>T c.106-337C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63578100
chr6:63578115	G G	A A	1	a0001c0001t0001g0009 a0001c0001t0001g0009	6	HG02257.hp2 HG02630.hp2 HG02896.hp1 others(3): Show HG02257.hp2 HG02630.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp2 HG03139.hp1	intron_variant	MODIFIER	c.106-322G>A c.106-322G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63578115
chr6:63578305	G G	A A	22	a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 others(19): Show a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0006g0031 a0001c0001t0008g0010 a0001c0001t0021g0003 a0001c0001t0021g0018 a0001c0001t0022g0003 a0001c0001t0024g0003 a0001c0001t0028g0003 a0001c0001t0039g0003 a0001c0002t0006g0005 a0001c0002t0010g0005 a0001c0002t0014g0005 a0001c0002t0014g0033 a0001c0003t0009g0005 a0001c0003t0015g0026 a0001c0003t0015g0027 a0001c0003t0018g0005 a0001c0005t0001g0032	83	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(80): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00733.hp2 HG01257.hp2 HG01496.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp2 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02818.hp2 HG02886.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp1 NA19012.hp1 NA19055.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp2 NA20129.hp2	intron_variant	MODIFIER	c.106-132G>A c.106-132G>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63578305
chr6:63578346	A A	G G	1	a0001c0001t0002g0034 a0001c0001t0002g0034	1	HG03195.hp2 HG03195.hp2	intron_variant	MODIFIER	c.106-91A>G c.106-91A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	2/5		chr6	63578346
chr6:63579097	A A	G G	1	a0001c0003t0015g0027 a0001c0003t0015g0027	1	HG02280.hp2 HG02280.hp2	intron_variant	MODIFIER	c.329+69A>G c.329+69A>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	4/5		chr6	63579097
chr6:63579420	C C	G G	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	NA18947.hp1 NA18947.hp1	intron_variant	MODIFIER	c.404+89C>G c.404+89C>G	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	5/5		chr6	63579420
chr6:63579810	C C	A A	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG02135.hp2 HG02135.hp2	intron_variant	MODIFIER	c.405-247C>A c.405-247C>A	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	5/5		chr6	63579810
chr6:63579818	T T	C C	1	a0001c0001t0017g0013 a0001c0001t0017g0013	2	HG01358.hp1 HG02257.hp1 HG01358.hp1 HG02257.hp1	intron_variant	MODIFIER	c.405-239T>C c.405-239T>C	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	5/5		chr6	63579818
chr6:63579855	C C	T T	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG02165.hp1 HG02165.hp1	intron_variant	MODIFIER	c.405-202C>T c.405-202C>T	PTP4A1	ENSG00000112245.13	transcript	ENST00000626021.3	protein_coding	5/5		chr6	63579855

Search by Genic region

Search

JoGo Online Haplotype Explorer PTP4A1_chr6_63567480_63588588

JoGo Local Haplotype Explorer (on iGV) PTP4A1_chr6_63567480_63588588

Translation Multiple Alignment View

Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 6)

TTranscript Level Haplotype Info (Total: 39)

GGenebody Level Haplotype Info (Total: 40)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 6)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 43)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 75)

Haplotype Details by Sample (Haploid Level) (Total: 360)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (Exon) (Total: 39)

GGenebody Level Haplotype Variants (Intron) (Total: 47)

Annotation (Repeats)

Annotation (SNP Array)