| geneid | 378950 |
|---|---|
| ensemblid | ENSG00000242389.9 |
| hgncid | 23916 |
| symbol | RBMY1E |
| name | RNA binding motif protein Y-linked family 1 member E |
| refseq_nuc | NM_001006118.3 |
| refseq_prot | NP_001006118.2 |
| ensembl_nuc | ENST00000382659.7 |
| ensembl_prot | ENSP00000372105.2 |
| mane_status | MANE Select |
| chr | chrY |
| start | 21903622 |
| end | 21918032 |
| strand | - |
| ver | v1.2 |
| region | chrY:21903622-21918032 |
| region5000 | chrY:21898622-21923032 |
| regionname0 | RBMY1E_chrY_21903622_21918032 |
| regionname5000 | RBMY1E_chrY_21898622_21923032 |
| ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 496 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | RBMY1E_chrY_21898622_21923032 | RBMY1E | copy fasta | chrY | 21898622 | 21923032 |
| chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 0/0 | 1491 | 1 | 0 | 0 | 1 | 0 | 0 | RBMY1E_chrY_21898622_21923032 | RBMY1E | copy fasta | chrY | 21898622 | 21923032 |
| thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 0/0 | 392 | 1 | 0 | 0 | 1 | 0 | 0 | RBMY1E_chrY_21898622_21923032 | RBMY1E | copy fasta | chrY | 21898622 | 21923032 |
| ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RBMY1E_chrY_21898622_21923032 | RBMY1E | chrY | 21898622 | 21923032 |
| achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 1491 | 1 | 0 | 0 | 1 | 0 | 0 | RBMY1E_chrY_21898622_21923032 | RBMY1E | copy fasta | chrY | 21898622 | 21923032 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 1882 | 1 | 0 | 0 | 1 | 0 | 0 | RBMY1E_chrY_21898622_21923032 | RBMY1E | copy fasta | chrY | 21898622 | 21923032 |
| actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RBMY1E_chrY_21898622_21923032 | RBMY1E | chrY | 21898622 | 21923032 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:21904957
|
A | G | 1 | a0001c0001t0001g0001 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.993-66T>C | RBMY1E | ENSG00000242389.9 | transcript | ENST00000382659.7 | protein_coding | 9/11 | chrY | 21904957 | ||||||
| chrY:21906342
|
G | C | 1 | a0001c0001t0001g0001 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.881+16C>G | RBMY1E | ENSG00000242389.9 | transcript | ENST00000382659.7 | protein_coding | 8/11 | chrY | 21906342 | ||||||
| chrY:21907556
|
A | G | 1 | a0001c0001t0001g0001 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.659+420T>C | RBMY1E | ENSG00000242389.9 | transcript | ENST00000382659.7 | protein_coding | 6/11 | chrY | 21907556 | ||||||
| chrY:21907963
|
AT | A | 1 | a0001c0001t0001g0001 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.659+12delA | RBMY1E | ENSG00000242389.9 | transcript | ENST00000382659.7 | protein_coding | 6/11 | chrY | 21907963 | ||||||
| chrY:21910041
|
C | G | 1 | a0001c0001t0001g0001 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.544+60G>C | RBMY1E | ENSG00000242389.9 | transcript | ENST00000382659.7 | protein_coding | 5/11 | chrY | 21910041 | ||||||
| chrY:21911936
|
G | C | 1 | a0001c0001t0001g0001 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.391+233C>G | RBMY1E | ENSG00000242389.9 | transcript | ENST00000382659.7 | protein_coding | 4/11 | chrY | 21911936 |