Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 140032 |
| ensemblid | ENSG00000280969.2 |
| hgncid | 18501 |
| symbol | RPS4Y2 |
| name | ribosomal protein S4 Y-linked 2 |
| refseq_nuc | NM_001039567.3 |
| refseq_prot | NP_001034656.1 |
| ensembl_nuc | ENST00000629237.2 |
| ensembl_prot | ENSP00000486252.1 |
| mane_status | MANE Select |
| chr | chrY |
| start | 20756108 |
| end | 20781032 |
| strand | + |
| ver | v1.2 |
| region | chrY:20756108-20781032 |
| region5000 | chrY:20751108-20786032 |
| regionname0 | RPS4Y2_chrY_20756108_20781032 |
| regionname5000 | RPS4Y2_chrY_20751108_20786032 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 263 | 130 | 17 | 20 | 70 | 5 | 16 | 55 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | MARGP others(258): Show |
chrY | 20751108 | 20786032 |
| a0002 | 0/0 | 263 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | MARGP others(258): Show |
chrY | 20751108 | 20786032 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 789 | 126 | 17 | 20 | 69 | 3 | 15 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | ATGGC others(784): Show |
chrY | 20751108 | 20786032 | ||
| a0001c0002 | 0/0 | 789 | 2 | 0 | 0 | 1 | 1 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | ATGGC others(784): Show |
chrY | 20751108 | 20786032 | ||
| a0001c0003 | 0/0 | 789 | 2 | 0 | 0 | 0 | 1 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | ATGGC others(784): Show |
chrY | 20751108 | 20786032 | ||
| a0002c0004 | 0/0 | 789 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | ATGGC others(784): Show |
chrY | 20751108 | 20786032 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 848 | 126 | 17 | 20 | 69 | 3 | 15 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | GCAGA others(843): Show |
chrY | 20751108 | 20786032 |
| a0001c0002t0001 | 0/0 | 848 | 2 | 0 | 0 | 1 | 1 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | GCAGA others(843): Show |
chrY | 20751108 | 20786032 |
| a0001c0003t0001 | 0/0 | 848 | 2 | 0 | 0 | 0 | 1 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | GCAGA others(843): Show |
chrY | 20751108 | 20786032 |
| a0002c0004t0001 | 0/0 | 848 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | GCAGA others(843): Show |
chrY | 20751108 | 20786032 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 1/0 | 13 | 0 | 5 | 0 | 1 | 6 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0002 | 0/0 | 10 | 0 | 4 | 3 | 0 | 3 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0003 | 0/0 | 12 | 0 | 0 | 12 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0004 | 0/0 | 8 | 0 | 0 | 8 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0005 | 0/0 | 8 | 8 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0006 | 0/0 | 7 | 0 | 0 | 7 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0007 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0008 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0009 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0010 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0011 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0012 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0013 | 0/1 | 2 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0014 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0015 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0016 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0018 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0027 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0028 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0029 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0030 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0037 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0039 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0040 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0042 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0043 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0047 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0049 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0052 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0053 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0056 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0058 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0059 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0060 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0001t0001g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0002t0001g0009 | 0/0 | 2 | 0 | 0 | 1 | 1 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0003t0001g0002 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0001c0003t0001g0007 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| a0002c0004t0001g0002 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0022 | EUR | GBR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG00280 | hp1 | a0001 | c0002 | t0001 | g0009 | EUR | FIN | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | CHS | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG00621 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | CHS | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | CHS | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0028 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0015 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0065 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0015 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0021 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0043 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01243 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01255 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01256 | hp1 | a0001 | c0001 | t0001 | g0047 | AMR | CLM | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0029 | AMR | CLM | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0052 | EUR | IBS | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0040 | AMR | PEL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0027 | AMR | PEL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02027 | hp1 | a0001 | c0001 | t0001 | g0054 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0051 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0062 | AFR | ACB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0039 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0016 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02083 | hp1 | a0001 | c0001 | t0001 | g0046 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0010 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0048 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0010 | EAS | KHV | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02145 | hp1 | a0001 | c0001 | t0001 | g0064 | AFR | ACB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ACB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0017 | AFR | GWD | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0058 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02647 | hp1 | a0001 | c0001 | t0001 | g0055 | AFR | GWD | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0049 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02735 | hp1 | a0001 | c0003 | t0001 | g0007 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02895 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ESN | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0053 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0018 | AFR | MSL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0061 | AFR | ESN | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ESN | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | MSL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03225 | hp1 | a0001 | c0001 | t0001 | g0020 | AFR | MSL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0013 | AFR | MSL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0009 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | STU | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0019 | SAS | BEB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG04115 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | STU | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | YRI | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | CHB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18747 | hp1 | a0001 | c0002 | t0001 | g0009 | EAS | CHB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0060 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0030 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18953 | hp1 | a0001 | c0001 | t0001 | g0041 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18959 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0023 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0032 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0024 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0034 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18985 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18986 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18989 | hp1 | a0001 | c0001 | t0001 | g0044 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18990 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18994 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0036 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19000 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0031 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19006 | hp1 | a0001 | c0001 | t0001 | g0025 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0050 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19043 | hp1 | a0002 | c0004 | t0001 | g0002 | AFR | LWK | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19055 | hp1 | a0001 | c0001 | t0001 | g0026 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0014 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0056 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0057 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19063 | hp1 | a0001 | c0001 | t0001 | g0037 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19067 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19072 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19075 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19076 | hp1 | a0001 | c0001 | t0001 | g0045 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0038 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19086 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19089 | hp1 | a0001 | c0001 | t0001 | g0033 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0059 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA20805 | hp1 | a0001 | c0003 | t0001 | g0002 | EUR | TSI | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0042 | SAS | GIH | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0063 | AFR | ACB | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | MSL | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0014 | EAS | JPT | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| homoSapiens | chm13v2 | a0001 | c0001 | t0001 | g0013 | REF | REF | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0001 | REF | REF | RPS4Y2_chrY_20751108_20786032 | RPS4Y2 | chrY | 20751108 | 20786032 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:20759982 | A | G | 1 | a0002 | 1 | NA19043.hp1 | missense_variant | MODERATE | c.196A>G | p.Met66Val | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 3/7 | 252/848 | 196/792 | 66/263 | chrY | 20759982 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:20759882 | G | A | 1 | a0001c0002 | 2 | HG00280.hp1 NA18747.hp1 |
synonymous_variant | LOW | c.96G>A | p.Ser32Ser | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 3/7 | 152/848 | 96/792 | 32/263 | chrY | 20759882 | |||
| chrY:20781011 | T | C | 1 | a0001c0003 | 2 | HG02735.hp1 NA20805.hp1 |
synonymous_variant | LOW | c.771T>C | p.Ala257Ala | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 7/7 | 827/848 | 771/792 | 257/263 | chrY | 20781011 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:20756187 | C | CAGTATAG others(299): Show |
1 | a0001c0001t0001g0016 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.3+21_3+22insAGTATA others(300): Show |
RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | chrY | 20756187 | |||||||
| chrY:20756188 | T | G | 1 | a0001c0001t0001g0016 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.3+22T>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | chrY | 20756188 | |||||||
| chrY:20756189 | C | G | 1 | a0001c0001t0001g0016 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.3+23C>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | chrY | 20756189 | |||||||
| chrY:20756191 | G | A | 1 | a0001c0001t0001g0016 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.3+25G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | chrY | 20756191 | |||||||
| chrY:20756204 | TC | T | 2 | a0001c0001t0001g0017 a0001c0001t0001g0018 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.3+40delC | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 20756204 | ||||||
| chrY:20756667 | C | A | 1 | a0001c0001t0001g0019 | 1 | HG03942.hp1 | intron_variant | MODIFIER | c.4-111C>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | chrY | 20756667 | |||||||
| chrY:20756691 | C | T | 9 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0017 others(6): Show |
17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.4-87C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 1/6 | chrY | 20756691 | |||||||
| chrY:20756975 | C | T | 2 | a0001c0001t0001g0014 a0001c0001t0001g0060 |
3 | NA18940.hp1 NA18955.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.81+120C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20756975 | |||||||
| chrY:20757082 | C | A | 1 | a0001c0001t0001g0020 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.81+227C>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20757082 | |||||||
| chrY:20757151 | T | C | 1 | a0001c0001t0001g0017 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.81+296T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20757151 | |||||||
| chrY:20757362 | TAA | T | 1 | a0001c0001t0001g0059 | 1 | NA19091.hp1 | intron_variant | MODIFIER | c.81+509_81+510delAA | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 20757362 | ||||||
| chrY:20757439 | G | GT | 4 | a0001c0001t0001g0009 a0001c0001t0001g0057 a0001c0001t0001g0058 others(1): Show |
5 | HG00280.hp1 HG02602.hp1 HG03654.hp1 others(2): Show |
intron_variant | MODIFIER | c.81+604dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 20757439 | ||||||
| chrY:20757439 | GT | G | 9 | a0001c0001t0001g0005 a0001c0001t0001g0023 a0001c0001t0001g0024 others(6): Show |
16 | HG01943.hp1 HG02055.hp1 HG02145.hp1 others(13): Show |
intron_variant | MODIFIER | c.81+604delT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 20757439 | ||||||
| chrY:20757439 | GTT | G | 1 | a0001c0001t0001g0061 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.81+603_81+604delTT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 20757439 | ||||||
| chrY:20757446 | T | G | 2 | a0001c0001t0001g0021 a0001c0001t0001g0022 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.81+591T>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20757446 | |||||||
| chrY:20757714 | G | A | 2 | a0001c0001t0001g0028 a0001c0001t0001g0029 |
2 | HG01069.hp1 HG01433.hp1 |
intron_variant | MODIFIER | c.81+859G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20757714 | |||||||
| chrY:20758040 | T | C | 13 | a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0023 others(10): Show |
21 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(18): Show |
intron_variant | MODIFIER | c.81+1185T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20758040 | |||||||
| chrY:20758137 | G | A | 2 | a0001c0001t0001g0010 a0001c0001t0001g0039 |
3 | HG02071.hp1 HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.81+1282G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20758137 | |||||||
| chrY:20758719 | C | CT | 9 | a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0020 others(6): Show |
10 | HG01069.hp1 HG01074.hp1 HG01106.hp1 others(7): Show |
intron_variant | MODIFIER | c.82-1124dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 20758719 | ||||||
| chrY:20758719 | CT | C | 8 | a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0024 others(5): Show |
9 | HG01099.hp1 HG01167.hp1 HG01934.hp1 others(6): Show |
intron_variant | MODIFIER | c.82-1124delT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 20758719 | ||||||
| chrY:20758768 | C | G | 1 | a0001c0001t0001g0055 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.82-1100C>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 2/6 | chrY | 20758768 | |||||||
| chrY:20760211 | G | A | 1 | a0001c0001t0001g0042 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.262+163G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 3/6 | chrY | 20760211 | |||||||
| chrY:20761168 | G | A | 1 | a0001c0001t0001g0043 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.263-116G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 3/6 | chrY | 20761168 | |||||||
| chrY:20761736 | G | A | 2 | a0001c0001t0001g0011 a0001c0001t0001g0059 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.360+355G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20761736 | |||||||
| chrY:20762486 | G | A | 2 | a0001c0001t0001g0025 a0001c0001t0001g0044 |
2 | NA18989.hp1 NA19006.hp1 |
intron_variant | MODIFIER | c.360+1105G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20762486 | |||||||
| chrY:20764267 | C | CT | 1 | a0001c0001t0001g0054 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.360+2899dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 20764267 | ||||||
| chrY:20764673 | G | A | 1 | a0001c0001t0001g0032 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.360+3292G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20764673 | |||||||
| chrY:20764789 | CT | C | 1 | a0001c0001t0001g0045 | 1 | NA19076.hp1 | intron_variant | MODIFIER | c.360+3412delT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 20764789 | ||||||
| chrY:20765118 | C | T | 4 | a0001c0001t0001g0003 a0001c0001t0001g0024 a0001c0001t0001g0041 others(1): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.361-3687C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20765118 | |||||||
| chrY:20765536 | C | T | 1 | a0001c0001t0001g0063 | 1 | HG02486.hp1 | intron_variant | MODIFIER | c.361-3269C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20765536 | |||||||
| chrY:20766180 | T | C | 1 | a0001c0001t0001g0055 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.361-2625T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20766180 | |||||||
| chrY:20766458 | C | G | 1 | a0001c0001t0001g0022 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.361-2347C>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20766458 | |||||||
| chrY:20767807 | G | GA | 1 | a0001c0001t0001g0033 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.361-984dupA | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 20767807 | ||||||
| chrY:20768443 | G | A | 1 | a0001c0001t0001g0010 | 2 | HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.361-362G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 4/6 | chrY | 20768443 | |||||||
| chrY:20769171 | T | C | 7 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 others(4): Show |
16 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(13): Show |
intron_variant | MODIFIER | c.532+195T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20769171 | |||||||
| chrY:20769254 | G | C | 2 | a0001c0001t0001g0014 a0001c0001t0001g0060 |
3 | NA18940.hp1 NA18955.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.532+278G>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20769254 | |||||||
| chrY:20769545 | A | C | 3 | a0001c0001t0001g0012 a0001c0001t0001g0025 a0001c0001t0001g0044 |
4 | NA18971.hp1 NA18974.hp1 NA18989.hp1 others(1): Show |
intron_variant | MODIFIER | c.532+569A>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20769545 | |||||||
| chrY:20769616 | T | C | 1 | a0001c0001t0001g0055 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.532+640T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20769616 | |||||||
| chrY:20770633 | TA | T | 3 | a0001c0001t0001g0006 a0001c0001t0001g0045 a0001c0001t0001g0057 |
9 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(6): Show |
intron_variant | MODIFIER | c.532+1666delA | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20770633 | ||||||
| chrY:20770794 | C | A | 1 | a0001c0001t0001g0046 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.532+1818C>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20770794 | |||||||
| chrY:20771194 | G | A | 5 | a0001c0001t0001g0005 a0001c0001t0001g0061 a0001c0001t0001g0062 others(2): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.532+2218G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20771194 | |||||||
| chrY:20772223 | G | A | 63 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(60): Show |
112 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(109): Show |
intron_variant | MODIFIER | c.532+3247G>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20772223 | |||||||
| chrY:20772401 | GT | G | 1 | a0001c0001t0001g0060 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.532+3437delT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20772401 | ||||||
| chrY:20774402 | C | CT | 10 | a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0031 others(7): Show |
12 | HG02040.hp1 HG02145.hp1 NA18612.hp1 others(9): Show |
intron_variant | MODIFIER | c.533-5082dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20774402 | ||||||
| chrY:20774402 | C | CTT | 1 | a0001c0001t0001g0025 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.533-5083_533-5082d others(4): Show |
RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20774402 | ||||||
| chrY:20774402 | CT | C | 5 | a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0046 others(2): Show |
5 | HG01069.hp1 HG01256.hp1 HG01515.hp1 others(2): Show |
intron_variant | MODIFIER | c.533-5082delT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20774402 | ||||||
| chrY:20774820 | TC | T | 4 | a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0046 others(1): Show |
4 | HG02074.hp1 HG02083.hp1 NA19009.hp1 others(1): Show |
intron_variant | MODIFIER | c.533-4687delC | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20774820 | ||||||
| chrY:20775343 | C | T | 1 | a0001c0001t0001g0043 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.533-4166C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20775343 | |||||||
| chrY:20775494 | C | A | 5 | a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0025 others(2): Show |
7 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(4): Show |
intron_variant | MODIFIER | c.533-4015C>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20775494 | |||||||
| chrY:20775903 | A | AT | 3 | a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0044 |
3 | NA18967.hp1 NA18989.hp1 NA19058.hp1 |
intron_variant | MODIFIER | c.533-3591dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20775903 | ||||||
| chrY:20776646 | A | G | 1 | a0001c0001t0001g0037 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.533-2863A>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20776646 | |||||||
| chrY:20776926 | A | AT | 2 | a0001c0001t0001g0026 a0001c0001t0001g0049 |
2 | HG02698.hp1 NA19055.hp1 |
intron_variant | MODIFIER | c.533-2569dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20776926 | ||||||
| chrY:20778627 | G | T | 1 | a0001c0001t0001g0053 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.533-882G>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20778627 | |||||||
| chrY:20778638 | T | C | 1 | a0001c0001t0001g0055 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.533-871T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20778638 | |||||||
| chrY:20778753 | T | C | 1 | a0001c0001t0001g0016 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.533-756T>C | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20778753 | |||||||
| chrY:20778800 | G | GT | 2 | a0001c0001t0001g0035 a0001c0001t0001g0054 |
2 | HG02027.hp1 NA19058.hp1 |
intron_variant | MODIFIER | c.533-699dupT | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 20778800 | ||||||
| chrY:20778959 | T | A | 1 | a0001c0001t0001g0015 | 2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.533-550T>A | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 5/6 | chrY | 20778959 | |||||||
| chrY:20779981 | C | T | 2 | a0001c0001t0001g0017 a0001c0001t0001g0018 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.690+315C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 6/6 | chrY | 20779981 | |||||||
| chrY:20780531 | C | T | 2 | a0001c0001t0001g0048 a0001c0001t0001g0049 |
2 | HG02132.hp1 HG02698.hp1 |
intron_variant | MODIFIER | c.691-400C>T | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 6/6 | chrY | 20780531 | |||||||
| chrY:20780864 | C | G | 1 | a0001c0001t0001g0062 | 1 | HG02055.hp1 | intron_variant | MODIFIER | c.691-67C>G | RPS4Y2 | ENSG00000280969.2 | transcript | ENST00000629237.2 | protein_coding | 6/6 | chrY | 20780864 |