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geneid	126638
ensemblid	ENSG00000215853.3
hgncid	26809
symbol	RPTN
name	repetin
refseq_nuc	NM_001122965.1
refseq_prot	NP_001116437.1
ensembl_nuc	ENST00000316073.3
ensembl_prot	ENSP00000317895.3
mane_status	MANE Select
chr	chr1
start	152153595
end	152159228
strand	-
ver	v1.2
region	chr1:152153595-152159228
region5000	chr1:152148595-152164228
regionname0	RPTN_chr1_152153595_152159228
regionname5000	RPTN_chr1_152148595_152164228

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	784	246	61	25	121	9	28	92	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002	0/0	772	107	17	24	56	0	10	47	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0003	0/0	772	19	1	8	1	4	5	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0004	0/0	784	16	1	11	0	2	2	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0005	0/0	784	6	0	0	6	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0006	0/0	772	5	0	4	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0007	0/0	784	4	1	2	1	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0008	0/0	784	2	2	0	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0009	0/0	784	2	0	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0010	0/0	772	2	0	0	2	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0011	0/0	772	2	0	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0012	0/0	784	1	1	0	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0013	0/0	784	1	0	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0014	0/0	784	1	0	0	1	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0015	0/0	784	1	1	0	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0016	0/0	784	1	1	0	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0017	0/0	784	1	0	0	1	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0018	0/0	748	1	1	0	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0019	0/0	772	1	0	0	1	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0020	0/0	758	1	0	0	1	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0021	0/0	784	1	1	0	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0022	0/0	784	1	0	0	1	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	2355	244	60	25	121	9	27	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0002	0/0	2319	102	13	24	55	0	10	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0003	0/0	2319	19	1	8	1	4	5	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0004	0/0	2355	16	1	11	0	2	2	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0005	0/0	2355	6	0	0	6	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0006	0/0	2319	4	0	4	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0007	0/0	2319	4	4	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0008	0/0	2355	4	1	2	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0009	0/0	2319	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0010	0/0	2319	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0011	0/0	2355	2	0	0	0	2	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0012	0/0	2355	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0013	0/0	2355	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0014	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0015	0/0	2319	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0016	0/0	2277	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0017	0/0	2319	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0018	0/0	2355	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0019	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0020	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0021	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0022	0/0	2355	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0023	0/0	2247	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0024	0/0	2355	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0025	0/0	2355	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0026	0/0	2319	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
c0027	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1215	237	38	50	109	7	33	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0002	1/1	1215	143	31	21	70	10	9	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0003	0/0	1214	26	9	5	8	0	4	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0004	0/0	1215	6	6	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0005	0/0	1215	3	0	0	3	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0006	0/0	1215	2	0	0	1	1	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0007	0/0	1217	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0008	0/0	1217	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0009	0/0	1215	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0010	0/0	1217	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
t0011	0/0	1214	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	78	8	9	50	8	3	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0002	0/0	77	0	22	48	0	7	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0003	0/0	57	8	1	34	0	14	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0004	1/0	29	8	4	14	0	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0005	0/0	18	7	3	5	0	3	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0006	0/0	16	1	6	1	3	5	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0007	0/0	15	1	11	0	1	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0008	0/0	11	6	0	4	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0009	0/0	7	7	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0010	0/0	7	0	1	5	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0011	0/0	5	5	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0012	0/1	5	0	3	0	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0013	0/0	4	4	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0014	0/0	4	0	2	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0015	0/0	3	3	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0016	0/0	3	0	0	2	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0017	0/0	3	0	2	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0018	0/0	3	0	0	3	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0019	0/0	3	0	3	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0020	0/0	3	3	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0021	0/0	3	0	1	0	0	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0022	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0023	0/0	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0024	0/0	2	1	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0025	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0026	0/0	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0027	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0028	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0029	0/0	2	0	0	0	0	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0030	0/0	2	0	0	0	2	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0031	0/0	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0032	0/0	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0033	0/0	2	0	1	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0034	0/0	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0035	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0036	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0037	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0038	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0039	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0040	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0041	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0042	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0043	0/0	1	0	1	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0044	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0045	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0046	0/0	1	0	1	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0047	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0048	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0049	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0050	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0051	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0052	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0053	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0054	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0055	0/0	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0056	0/0	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0057	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0058	0/0	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0059	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0060	0/0	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0061	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0062	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0063	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0064	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0065	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0066	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0067	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0068	0/0	1	0	1	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0069	0/0	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0070	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0071	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0072	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0073	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0074	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0075	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
g0076	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	2355	244	60	25	121	9	27	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0021	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0024	0/0	2355	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0002	0/0	2319	102	13	24	55	0	10	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0007	0/0	2319	4	4	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0017	0/0	2319	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0003c0003	0/0	2319	19	1	8	1	4	5	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0004c0004	0/0	2355	16	1	11	0	2	2	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0005c0005	0/0	2355	6	0	0	6	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0006c0006	0/0	2319	4	0	4	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0006c0015	0/0	2319	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0007c0008	0/0	2355	4	1	2	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0008c0012	0/0	2355	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0009c0011	0/0	2355	2	0	0	0	2	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0010c0009	0/0	2319	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0011c0010	0/0	2319	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0012c0027	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0013c0025	0/0	2355	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0014c0022	0/0	2355	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0015c0020	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0016c0019	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0017c0018	0/0	2355	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0018c0023	0/0	2247	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0019c0026	0/0	2319	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0020c0016	0/0	2277	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0021c0014	0/0	2355	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0022c0013	0/0	2355	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	3569	78	21	1	41	0	15	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0002	1/1	3569	133	27	19	69	8	8	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0003	0/0	3568	25	9	5	7	0	4	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0005	0/0	3569	3	0	0	3	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0006	0/0	3569	2	0	0	1	1	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0007	0/0	3571	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0010	0/0	3571	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0001t0011	0/0	3568	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0021t0002	0/0	3569	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0001c0024t0002	0/0	3569	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0002t0001	0/0	3533	95	7	24	54	0	10	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0002t0004	0/0	3533	6	6	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0002t0009	0/0	3533	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0007t0001	0/0	3533	4	4	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0002c0017t0001	0/0	3533	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0003c0003t0001	0/0	3533	19	1	8	1	4	5	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0004c0004t0001	0/0	3569	16	1	11	0	2	2	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0005c0005t0001	0/0	3569	6	0	0	6	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0006c0006t0001	0/0	3533	4	0	4	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0006c0015t0001	0/0	3533	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0007c0008t0002	0/0	3569	4	1	2	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0008c0012t0002	0/0	3569	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0009c0011t0002	0/0	3569	2	0	0	0	2	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0010c0009t0001	0/0	3533	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0011c0010t0001	0/0	3533	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0012c0027t0001	0/0	3569	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0013c0025t0001	0/0	3569	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0014c0022t0001	0/0	3569	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0015c0020t0001	0/0	3569	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0016c0019t0001	0/0	3569	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0017c0018t0003	0/0	3568	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0018c0023t0001	0/0	3461	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0019c0026t0001	0/0	3533	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0020c0016t0001	0/0	3491	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0021c0014t0008	0/0	3571	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228
a0022c0013t0001	0/0	3569	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	copy fasta	chr1	152148595	152164228

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0003	0/0	57	8	1	34	0	14	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0001g0008	0/0	11	6	0	4	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0001g0020	0/0	3	3	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0001g0024	0/0	2	1	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0001g0032	0/0	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0001	0/0	78	8	9	50	8	3	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0004	1/0	29	8	4	14	0	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0009	0/0	7	7	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0012	0/1	5	0	3	0	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0014	0/0	4	0	2	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0021	0/0	3	0	1	0	0	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0039	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0040	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0042	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0044	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0072	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0074	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0002g0075	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0003g0005	0/0	18	7	3	5	0	3	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0003g0016	0/0	3	0	0	2	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0003g0031	0/0	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0003g0034	0/0	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0005g0027	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0005g0065	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0006g0051	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0006g0069	0/0	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0007g0063	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0010g0064	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0001t0011g0070	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0021t0002g0041	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0001c0024t0002g0055	0/0	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0002	0/0	77	0	22	48	0	7	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0010	0/0	7	0	1	5	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0011	0/0	5	5	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0029	0/0	2	0	0	0	0	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0035	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0036	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0043	0/0	1	0	1	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0001g0076	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0004g0015	0/0	3	3	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0004g0023	0/0	2	2	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0004g0037	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0002t0009g0047	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0007t0001g0013	0/0	4	4	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0002c0017t0001g0048	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0003c0003t0001g0006	0/0	16	1	6	1	3	5	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0003c0003t0001g0033	0/0	2	0	1	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0003c0003t0001g0068	0/0	1	0	1	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0004c0004t0001g0007	0/0	15	1	11	0	1	2	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0004c0004t0001g0058	0/0	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0005c0005t0001g0018	0/0	3	0	0	3	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0005c0005t0001g0028	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0005c0005t0001g0071	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0006c0006t0001g0019	0/0	3	0	3	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0006c0006t0001g0046	0/0	1	0	1	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0006c0015t0001g0060	0/0	1	0	0	0	1	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0007c0008t0002g0017	0/0	3	0	2	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0007c0008t0002g0066	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0008c0012t0002g0053	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0008c0012t0002g0073	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0009c0011t0002g0030	0/0	2	0	0	0	2	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0010c0009t0001g0025	0/0	2	0	0	2	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0011c0010t0001g0026	0/0	2	0	2	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0012c0027t0001g0067	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0013c0025t0001g0056	0/0	1	0	0	0	0	1	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0014c0022t0001g0052	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0015c0020t0001g0050	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0016c0019t0001g0049	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0017c0018t0003g0062	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0018c0023t0001g0054	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0019c0026t0001g0057	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0020c0016t0001g0061	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0021c0014t0008g0059	0/0	1	1	0	0	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
a0022c0013t0001g0045	0/0	1	0	0	1	0	0	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0003	c0003	t0001	g0006	EUR	GBR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00099	hp2	a0004	c0004	t0001	g0007	EUR	GBR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00140	hp1	a0001	c0001	t0002	g0001	EUR	GBR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00140	hp2	a0001	c0001	t0006	g0069	EUR	GBR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00280	hp1	a0003	c0003	t0001	g0033	EUR	FIN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00280	hp2	a0001	c0001	t0002	g0001	EUR	FIN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00323	hp1	a0001	c0001	t0002	g0001	EUR	FIN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00323	hp2	a0006	c0015	t0001	g0060	EUR	FIN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00408	hp1	a0001	c0001	t0001	g0003	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00408	hp2	a0001	c0001	t0001	g0003	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00423	hp1	a0001	c0001	t0002	g0001	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00423	hp2	a0001	c0001	t0005	g0065	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00438	hp1	a0001	c0001	t0002	g0001	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00438	hp2	a0005	c0005	t0001	g0028	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00544	hp1	a0002	c0002	t0001	g0002	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00544	hp2	a0001	c0001	t0003	g0016	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00558	hp1	a0001	c0001	t0002	g0075	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00558	hp2	a0001	c0001	t0002	g0001	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00597	hp1	a0001	c0001	t0001	g0008	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00597	hp2	a0002	c0002	t0001	g0002	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00609	hp1	a0002	c0002	t0001	g0002	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00609	hp2	a0001	c0001	t0002	g0001	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00639	hp1	a0006	c0006	t0001	g0046	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00639	hp2	a0004	c0004	t0001	g0007	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00642	hp1	a0002	c0002	t0001	g0002	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00642	hp2	a0004	c0004	t0001	g0007	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00673	hp1	a0002	c0002	t0001	g0076	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00673	hp2	a0001	c0001	t0002	g0001	EAS	CHS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00733	hp1	a0003	c0003	t0001	g0006	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00733	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00735	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00735	hp2	a0003	c0003	t0001	g0068	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00738	hp1	a0006	c0006	t0001	g0019	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00738	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00741	hp1	a0002	c0002	t0001	g0002	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG00741	hp2	a0006	c0006	t0001	g0019	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01069	hp1	a0004	c0004	t0001	g0007	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01069	hp2	a0001	c0001	t0003	g0034	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01070	hp1	a0002	c0002	t0001	g0002	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01070	hp2	a0007	c0008	t0002	g0017	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01071	hp1	a0001	c0001	t0003	g0034	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01071	hp2	a0007	c0008	t0002	g0017	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01074	hp1	a0001	c0001	t0001	g0003	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01074	hp2	a0002	c0002	t0001	g0002	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01081	hp1	a0001	c0001	t0003	g0005	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01081	hp2	a0001	c0001	t0002	g0004	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01106	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01106	hp2	a0004	c0004	t0001	g0007	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01109	hp1	a0003	c0003	t0001	g0006	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01109	hp2	a0001	c0001	t0002	g0004	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01167	hp1	a0011	c0010	t0001	g0026	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01167	hp2	a0001	c0001	t0002	g0004	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01168	hp1	a0001	c0001	t0002	g0012	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01168	hp2	a0006	c0006	t0001	g0019	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01169	hp1	a0011	c0010	t0001	g0026	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01169	hp2	a0001	c0001	t0002	g0012	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01175	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01175	hp2	a0002	c0002	t0001	g0002	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01192	hp1	a0001	c0001	t0003	g0005	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01192	hp2	a0003	c0003	t0001	g0033	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01243	hp1	a0003	c0003	t0001	g0006	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01243	hp2	a0001	c0001	t0002	g0014	AMR	PUR	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01255	hp1	a0004	c0004	t0001	g0007	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01255	hp2	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01256	hp1	a0002	c0002	t0001	g0010	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01256	hp2	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01257	hp1	a0004	c0004	t0001	g0007	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01257	hp2	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01258	hp1	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01258	hp2	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01261	hp1	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01261	hp2	a0004	c0004	t0001	g0007	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01346	hp1	a0003	c0003	t0001	g0006	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01346	hp2	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01358	hp1	a0001	c0001	t0002	g0021	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01358	hp2	a0004	c0004	t0001	g0007	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01361	hp1	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01361	hp2	a0003	c0003	t0001	g0006	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01433	hp1	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01433	hp2	a0001	c0001	t0002	g0001	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01496	hp1	a0002	c0002	t0001	g0002	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01496	hp2	a0001	c0001	t0002	g0004	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01515	hp1	a0009	c0011	t0002	g0030	EUR	IBS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01515	hp2	a0001	c0001	t0002	g0001	EUR	IBS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01516	hp1	a0004	c0004	t0001	g0058	EUR	IBS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01516	hp2	a0001	c0001	t0002	g0001	EUR	IBS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01517	hp1	a0001	c0001	t0002	g0001	EUR	IBS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01517	hp2	a0009	c0011	t0002	g0030	EUR	IBS	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01884	hp1	a0001	c0001	t0001	g0008	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01884	hp2	a0001	c0001	t0001	g0003	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01934	hp1	a0002	c0002	t0001	g0043	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01934	hp2	a0001	c0001	t0002	g0014	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01943	hp1	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01943	hp2	a0004	c0004	t0001	g0007	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01975	hp1	a0001	c0001	t0002	g0001	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01975	hp2	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01978	hp1	a0004	c0004	t0001	g0007	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01978	hp2	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01981	hp1	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01981	hp2	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01993	hp1	a0004	c0004	t0001	g0007	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01993	hp2	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02004	hp1	a0001	c0001	t0003	g0005	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02004	hp2	a0003	c0003	t0001	g0006	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02015	hp1	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02015	hp2	a0003	c0003	t0001	g0006	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02027	hp1	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02027	hp2	a0001	c0001	t0001	g0003	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02040	hp1	a0005	c0005	t0001	g0018	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02040	hp2	a0005	c0005	t0001	g0018	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02055	hp1	a0001	c0001	t0003	g0005	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02055	hp2	a0001	c0001	t0001	g0008	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02056	hp1	a0005	c0005	t0001	g0071	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02056	hp2	a0001	c0001	t0002	g0004	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02071	hp1	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02071	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02074	hp1	a0002	c0002	t0001	g0010	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02074	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02080	hp1	a0005	c0005	t0001	g0018	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02080	hp2	a0002	c0002	t0001	g0002	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02083	hp1	a0001	c0001	t0001	g0003	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02083	hp2	a0005	c0005	t0001	g0028	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02129	hp1	a0001	c0001	t0005	g0027	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02129	hp2	a0001	c0001	t0001	g0003	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02132	hp1	a0002	c0002	t0001	g0002	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02132	hp2	a0001	c0001	t0001	g0003	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02135	hp1	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02135	hp2	a0010	c0009	t0001	g0025	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02145	hp1	a0001	c0001	t0001	g0003	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02145	hp2	a0001	c0001	t0002	g0001	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02165	hp1	a0001	c0001	t0002	g0001	EAS	CDX	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02165	hp2	a0001	c0001	t0003	g0016	EAS	CDX	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02257	hp1	a0001	c0001	t0002	g0004	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02257	hp2	a0001	c0001	t0002	g0009	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02258	hp1	a0001	c0001	t0001	g0003	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02258	hp2	a0001	c0001	t0001	g0003	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02280	hp1	a0001	c0001	t0001	g0003	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02280	hp2	a0002	c0002	t0004	g0015	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02300	hp1	a0001	c0001	t0002	g0012	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02300	hp2	a0002	c0002	t0001	g0002	AMR	PEL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02451	hp1	a0002	c0007	t0001	g0013	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02451	hp2	a0002	c0002	t0004	g0023	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02523	hp1	a0002	c0002	t0001	g0010	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02523	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02572	hp1	a0001	c0001	t0002	g0001	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02572	hp2	a0001	c0001	t0002	g0001	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02602	hp1	a0001	c0001	t0002	g0021	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02602	hp2	a0002	c0002	t0001	g0002	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02615	hp1	a0001	c0001	t0002	g0004	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02615	hp2	a0001	c0021	t0002	g0041	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02622	hp1	a0012	c0027	t0001	g0067	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02622	hp2	a0001	c0001	t0002	g0040	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02630	hp1	a0002	c0002	t0001	g0011	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02630	hp2	a0001	c0001	t0003	g0005	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02647	hp1	a0001	c0001	t0002	g0004	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02647	hp2	a0001	c0001	t0001	g0008	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02683	hp1	a0001	c0001	t0002	g0004	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02683	hp2	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02698	hp1	a0001	c0001	t0003	g0005	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02698	hp2	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02717	hp1	a0002	c0002	t0001	g0011	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02717	hp2	a0008	c0012	t0002	g0073	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02723	hp1	a0001	c0001	t0001	g0020	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02723	hp2	a0001	c0001	t0002	g0004	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02735	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02735	hp2	a0001	c0001	t0002	g0001	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02738	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02738	hp2	a0001	c0001	t0002	g0004	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02809	hp1	a0002	c0002	t0004	g0023	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02809	hp2	a0001	c0001	t0002	g0001	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02818	hp1	a0001	c0001	t0002	g0009	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02818	hp2	a0008	c0012	t0002	g0053	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02895	hp1	a0001	c0001	t0002	g0001	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02895	hp2	a0001	c0001	t0003	g0005	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02896	hp1	a0001	c0001	t0003	g0031	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02896	hp2	a0001	c0001	t0002	g0004	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02922	hp1	a0001	c0001	t0003	g0031	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02922	hp2	a0001	c0001	t0001	g0032	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02965	hp1	a0001	c0001	t0007	g0063	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02965	hp2	a0001	c0001	t0010	g0064	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02970	hp1	a0002	c0002	t0004	g0015	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02970	hp2	a0001	c0001	t0003	g0005	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02976	hp1	a0016	c0019	t0001	g0049	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02976	hp2	a0001	c0001	t0001	g0008	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03017	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03017	hp2	a0004	c0004	t0001	g0007	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03041	hp1	a0001	c0001	t0011	g0070	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03041	hp2	a0001	c0001	t0001	g0003	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03130	hp1	a0002	c0007	t0001	g0013	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03130	hp2	a0001	c0001	t0002	g0009	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03139	hp1	a0001	c0001	t0002	g0004	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03139	hp2	a0001	c0001	t0001	g0032	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03195	hp1	a0002	c0002	t0001	g0011	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03195	hp2	a0001	c0001	t0001	g0008	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03209	hp1	a0001	c0001	t0003	g0005	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03209	hp2	a0001	c0001	t0002	g0039	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03239	hp1	a0003	c0003	t0001	g0006	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03239	hp2	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03453	hp1	a0001	c0001	t0003	g0005	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03453	hp2	a0002	c0002	t0004	g0037	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03486	hp1	a0001	c0001	t0002	g0001	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03486	hp2	a0001	c0001	t0003	g0005	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03490	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03490	hp2	a0003	c0003	t0001	g0006	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03491	hp1	a0002	c0002	t0001	g0002	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03491	hp2	a0001	c0001	t0003	g0005	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03492	hp1	a0002	c0002	t0001	g0002	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03492	hp2	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03516	hp1	a0002	c0002	t0004	g0015	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03516	hp2	a0001	c0001	t0002	g0009	AFR	ESN	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03540	hp1	a0001	c0001	t0002	g0001	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03540	hp2	a0001	c0001	t0002	g0004	AFR	GWD	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03579	hp1	a0001	c0001	t0002	g0009	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03579	hp2	a0001	c0001	t0001	g0008	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03654	hp1	a0002	c0002	t0001	g0002	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03654	hp2	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03669	hp1	a0001	c0001	t0002	g0012	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03669	hp2	a0004	c0004	t0001	g0007	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03688	hp1	a0001	c0001	t0001	g0003	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03688	hp2	a0001	c0024	t0002	g0055	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03704	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03704	hp2	a0003	c0003	t0001	g0006	SAS	PJL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03831	hp1	a0002	c0002	t0001	g0029	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03831	hp2	a0013	c0025	t0001	g0056	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03834	hp1	a0003	c0003	t0001	g0006	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03834	hp2	a0001	c0001	t0002	g0021	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03927	hp1	a0002	c0002	t0001	g0029	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03927	hp2	a0001	c0001	t0001	g0003	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03942	hp1	a0002	c0002	t0001	g0010	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03942	hp2	a0002	c0002	t0001	g0002	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04184	hp1	a0001	c0001	t0001	g0003	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04184	hp2	a0001	c0001	t0002	g0001	SAS	BEB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04199	hp1	a0001	c0001	t0003	g0005	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04199	hp2	a0002	c0002	t0001	g0002	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04204	hp1	a0001	c0001	t0003	g0016	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04204	hp2	a0001	c0001	t0001	g0008	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04228	hp1	a0001	c0001	t0001	g0003	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG04228	hp2	a0001	c0001	t0001	g0003	SAS	STU	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18522	hp1	a0001	c0001	t0002	g0004	AFR	YRI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18522	hp2	a0021	c0014	t0008	g0059	AFR	YRI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18612	hp1	a0002	c0002	t0001	g0002	EAS	CHB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18612	hp2	a0001	c0001	t0002	g0001	EAS	CHB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18747	hp1	a0001	c0001	t0002	g0001	EAS	CHB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18747	hp2	a0001	c0001	t0001	g0003	EAS	CHB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18906	hp1	a0001	c0001	t0001	g0020	AFR	YRI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18906	hp2	a0001	c0001	t0002	g0009	AFR	YRI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18939	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18939	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18940	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18940	hp2	a0019	c0026	t0001	g0057	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18941	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18941	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18943	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18943	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18946	hp1	a0001	c0001	t0006	g0051	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18946	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18947	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18947	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18948	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18948	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18949	hp1	a0020	c0016	t0001	g0061	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18949	hp2	a0001	c0001	t0005	g0027	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18951	hp1	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18951	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18953	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18953	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18956	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18956	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18959	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18959	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18960	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18960	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18961	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18961	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18962	hp1	a0001	c0001	t0002	g0074	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18962	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18963	hp1	a0002	c0002	t0001	g0010	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18963	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18964	hp1	a0022	c0013	t0001	g0045	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18964	hp2	a0007	c0008	t0002	g0017	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18966	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18966	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18967	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18967	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18969	hp1	a0002	c0002	t0009	g0047	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18969	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18970	hp1	a0001	c0001	t0003	g0005	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18970	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18971	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18971	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18972	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18972	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18974	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18974	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18978	hp1	a0001	c0001	t0002	g0014	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18978	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18979	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18979	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18981	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18981	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18982	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18982	hp2	a0002	c0017	t0001	g0048	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18983	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18983	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18985	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18985	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18987	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18987	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18988	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18988	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18989	hp1	a0001	c0001	t0001	g0008	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18989	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18990	hp1	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18990	hp2	a0001	c0001	t0001	g0008	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18991	hp1	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18991	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18992	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18992	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18993	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18993	hp2	a0001	c0001	t0003	g0005	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18994	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18994	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18995	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18995	hp2	a0002	c0002	t0001	g0010	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18999	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA18999	hp2	a0001	c0001	t0002	g0014	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19000	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19000	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19001	hp1	a0001	c0001	t0001	g0008	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19001	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19003	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19003	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19005	hp1	a0002	c0002	t0001	g0010	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19005	hp2	a0001	c0001	t0001	g0024	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19007	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19007	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19009	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19009	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19010	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19010	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19011	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19011	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19012	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19012	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19030	hp1	a0002	c0002	t0001	g0011	AFR	LWK	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19030	hp2	a0002	c0002	t0001	g0035	AFR	LWK	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19043	hp1	a0001	c0001	t0001	g0024	AFR	LWK	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19043	hp2	a0001	c0001	t0002	g0001	AFR	LWK	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19054	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19054	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19055	hp1	a0014	c0022	t0001	g0052	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19055	hp2	a0001	c0001	t0003	g0005	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19056	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19056	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19059	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19059	hp2	a0001	c0001	t0001	g0022	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19060	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19060	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19062	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19062	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19063	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19063	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19064	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19064	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19065	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19065	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19066	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19066	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19067	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19067	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19068	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19068	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19070	hp1	a0001	c0001	t0003	g0005	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19070	hp2	a0001	c0001	t0002	g0044	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19074	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19074	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19077	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19077	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19079	hp1	a0010	c0009	t0001	g0025	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19079	hp2	a0001	c0001	t0003	g0005	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19080	hp1	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19080	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19081	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19081	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19082	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19082	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19084	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19084	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19085	hp1	a0017	c0018	t0003	g0062	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19085	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19087	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19087	hp2	a0001	c0001	t0002	g0004	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19089	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19089	hp2	a0001	c0001	t0001	g0022	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19090	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19090	hp2	a0002	c0002	t0001	g0002	EAS	JPT	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19240	hp1	a0002	c0007	t0001	g0013	AFR	YRI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA19240	hp2	a0001	c0001	t0002	g0009	AFR	YRI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20129	hp1	a0004	c0004	t0001	g0007	AFR	ASW	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20129	hp2	a0001	c0001	t0001	g0020	AFR	ASW	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20752	hp1	a0001	c0001	t0002	g0001	EUR	TSI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20752	hp2	a0003	c0003	t0001	g0006	EUR	TSI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20805	hp1	a0001	c0001	t0002	g0001	EUR	TSI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20805	hp2	a0003	c0003	t0001	g0006	EUR	TSI	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20905	hp1	a0003	c0003	t0001	g0006	SAS	GIH	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20905	hp2	a0002	c0002	t0001	g0002	SAS	GIH	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01123	hp1	a0001	c0001	t0002	g0001	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG01123	hp2	a0001	c0001	t0002	g0001	AMR	CLM	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02109	hp1	a0001	c0001	t0001	g0003	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02109	hp2	a0001	c0001	t0001	g0038	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02486	hp1	a0002	c0002	t0001	g0011	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02486	hp2	a0015	c0020	t0001	g0050	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02559	hp1	a0001	c0001	t0002	g0072	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG02559	hp2	a0003	c0003	t0001	g0006	AFR	ACB	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03471	hp1	a0002	c0002	t0001	g0036	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG03471	hp2	a0002	c0007	t0001	g0013	AFR	MSL	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG06807	hp1	a0018	c0023	t0001	g0054	AFR	USA	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
HG06807	hp2	a0001	c0001	t0002	g0042	AFR	USA	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20300	hp1	a0001	c0001	t0001	g0003	AFR	USA	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
NA20300	hp2	a0007	c0008	t0002	g0066	AFR	USA	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
homoSapiens_chm13v2	hp1	a0001	c0001	t0002	g0012	REF	REF	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0004	REF	REF	RPTN_chr1_152148595_152164228	RPTN	chr1	152148595	152164228

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:152154764	CGTCTTCA others(35): Show CGTCTTCATGGGTTTGCCTGTCTCGTCTCTGACGGTTCTGCTT	C C	1	a0020 a0020	1	NA18949.hp1 NA18949.hp1	conservative_inframe_deletion	MODERATE	c.2293_2334delAAGCAG others(36): Show c.2293_2334delAAGCAGAACCGTCAGAGACGAGACAGGCAAACCCAT GAAGAC	p.Lys765_Asp778del p.Lys765_Asp778del	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	2399/3569	2293/2355	765/784	chr1	152154764
chr1:152154979	T T	C C	1	a0003 a0003	19	HG00099.hp1 HG00280.hp1 HG00733.hp1 others(16): Show HG00099.hp1 HG00280.hp1 HG00733.hp1 HG00735.hp2 HG01109.hp1 HG01192.hp2 HG01243.hp1 HG01346.hp1 HG01361.hp2 HG02004.hp2 HG02015.hp2 HG02559.hp2 HG03239.hp1 HG03490.hp2 HG03704.hp2 HG03834.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1	missense_variant	MODERATE	c.2120A>G c.2120A>G	p.Glu707Gly p.Glu707Gly	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	2185/3569	2120/2355	707/784	chr1	152154979
chr1:152155187	A A	G G	1	a0015 a0015	1	HG02486.hp2 HG02486.hp2	missense_variant	MODERATE	c.1912T>C c.1912T>C	p.Ser638Pro p.Ser638Pro	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1977/3569	1912/2355	638/784	chr1	152155187
chr1:152155421	C C	T T	1	a0016 a0016	1	HG02976.hp1 HG02976.hp1	missense_variant	MODERATE	c.1678G>A c.1678G>A	p.Gly560Ser p.Gly560Ser	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1743/3569	1678/2355	560/784	chr1	152155421
chr1:152155513	T T	C C	1	a0007 a0007	4	HG01070.hp2 HG01071.hp2 NA18964.hp2 others(1): Show HG01070.hp2 HG01071.hp2 NA18964.hp2 NA20300.hp2	missense_variant	MODERATE	c.1586A>G c.1586A>G	p.Gln529Arg p.Gln529Arg	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1651/3569	1586/2355	529/784	chr1	152155513
chr1:152155645	G G	A A	2	a0004 a0022 a0004 a0022	17	HG00099.hp2 HG00639.hp2 HG00642.hp2 others(14): Show HG00099.hp2 HG00639.hp2 HG00642.hp2 HG01069.hp1 HG01106.hp2 HG01255.hp1 HG01257.hp1 HG01261.hp2 HG01358.hp2 HG01516.hp1 HG01943.hp2 HG01978.hp1 HG01993.hp1 HG03017.hp2 HG03669.hp2 NA18964.hp1 NA20129.hp1	missense_variant	MODERATE	c.1454C>T c.1454C>T	p.Ser485Phe p.Ser485Phe	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1519/3569	1454/2355	485/784	chr1	152155645
chr1:152155667	G G	T T	1	a0014 a0014	1	NA19055.hp1 NA19055.hp1	missense_variant	MODERATE	c.1432C>A c.1432C>A	p.Pro478Thr p.Pro478Thr	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1497/3569	1432/2355	478/784	chr1	152155667
chr1:152155673	T T	C C	1	a0014 a0014	1	NA19055.hp1 NA19055.hp1	missense_variant	MODERATE	c.1426A>G c.1426A>G	p.Ser476Gly p.Ser476Gly	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1491/3569	1426/2355	476/784	chr1	152155673
chr1:152155736	C C	G G	1	a0006 a0006	5	HG00323.hp2 HG00639.hp1 HG00738.hp1 others(2): Show HG00323.hp2 HG00639.hp1 HG00738.hp1 HG00741.hp2 HG01168.hp2	missense_variant	MODERATE	c.1363G>C c.1363G>C	p.Asp455His p.Asp455His	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1428/3569	1363/2355	455/784	chr1	152155736
chr1:152155792	C C	G G	1	a0017 a0017	1	NA19085.hp1 NA19085.hp1	missense_variant	MODERATE	c.1307G>C c.1307G>C	p.Ser436Thr p.Ser436Thr	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1372/3569	1307/2355	436/784	chr1	152155792
chr1:152155925	C C	T T	1	a0009 a0009	2	HG01515.hp1 HG01517.hp2 HG01515.hp1 HG01517.hp2	missense_variant	MODERATE	c.1174G>A c.1174G>A	p.Gly392Ser p.Gly392Ser	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1239/3569	1174/2355	392/784	chr1	152155925
chr1:152155946	G G	C C	1	a0008 a0008	2	HG02717.hp2 HG02818.hp2 HG02717.hp2 HG02818.hp2	missense_variant	MODERATE	c.1153C>G c.1153C>G	p.Gln385Glu p.Gln385Glu	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1218/3569	1153/2355	385/784	chr1	152155946
chr1:152155956	CTGACCAT others(101): Show CTGACCATAGTGGGAACTCTGACCTTGTCTGTTTGGTTGACTGTAGTGGG AACCCTGGCCTTGTCTGTTTGTCTGATCATAATGATAACACTGGCCTTTT CTGTCCATT	C C	1	a0018 a0018	1	HG06807.hp1 HG06807.hp1	disruptive_inframe_deletion	MODERATE	c.1035_1142del c.1035_1142del	p.Met346_Gln381del p.Met346_Gln381del	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1207/3569	1035/2355	345/784	chr1	152155956
chr1:152156087	C C	A A	1	a0010 a0010	2	HG02135.hp2 NA19079.hp1 HG02135.hp2 NA19079.hp1	missense_variant	MODERATE	c.1012G>T c.1012G>T	p.Gly338Cys p.Gly338Cys	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1077/3569	1012/2355	338/784	chr1	152156087
chr1:152156134	G G	A A	1	a0013 a0013	1	HG03831.hp2 HG03831.hp2	missense_variant	MODERATE	c.965C>T c.965C>T	p.Thr322Met p.Thr322Met	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1030/3569	965/2355	322/784	chr1	152156134
chr1:152156362	T T	A A	1	a0005 a0005	6	HG00438.hp2 HG02040.hp1 HG02040.hp2 others(3): Show HG00438.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02080.hp1 HG02083.hp2	missense_variant	MODERATE	c.737A>T c.737A>T	p.His246Leu p.His246Leu	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	802/3569	737/2355	246/784	chr1	152156362
chr1:152156390	C C	A A	1	a0011 a0011	2	HG01167.hp1 HG01169.hp1 HG01167.hp1 HG01169.hp1	missense_variant	MODERATE	c.709G>T c.709G>T	p.Asp237Tyr p.Asp237Tyr	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	774/3569	709/2355	237/784	chr1	152156390
chr1:152156575	CTCTCAGG others(29): Show CTCTCAGGCTGACTGTGGTGGGAATCTCTGTCTTGTT	C C	1	a0019 a0019	1	NA18940.hp2 NA18940.hp2	disruptive_inframe_deletion	MODERATE	c.488_523delAACAAGAC others(28): Show c.488_523delAACAAGACAGAGATTCCCACCACAGTCAGCCTGAGA	p.Lys163_Glu174del p.Lys163_Glu174del	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	588/3569	488/2355	163/784	chr1	152156575
chr1:152156589	GTGGTGGG others(29): Show GTGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA	G G	6	a0002 a0003 a0006 others(3): Show a0002 a0003 a0006 a0010 a0011 a0020	136	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(133): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00544.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01074.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02074.hp1 HG02080.hp2 HG02132.hp1 HG02135.hp2 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp2 HG02602.hp2 HG02630.hp1 HG02717.hp1 HG02809.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp1 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03654.hp1 HG03704.hp2 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04199.hp2 NA18612.hp1 NA18939.hp2 NA18941.hp1 NA18943.hp1 NA18946.hp2 NA18949.hp1 NA18956.hp1 NA18959.hp2 NA18960.hp2 NA18961.hp1 NA18963.hp1 NA18966.hp2 NA18967.hp1 NA18969.hp1 NA18970.hp2 NA18972.hp1 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18985.hp1 NA18987.hp1 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp2 NA18995.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19054.hp2 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19066.hp2 NA19074.hp1 NA19079.hp1 NA19080.hp1 NA19084.hp2 NA19090.hp2 NA19240.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	disruptive_inframe_deletion	MODERATE	c.474_509delTGGTCAGT others(28): Show c.474_509delTGGTCAGTCTGAGAAACAAGACAGAGATTCCCACCA	p.Gly159_His170del p.Gly159_His170del	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	574/3569	474/2355	158/784	chr1	152156589
chr1:152156611	T T	C C	1	a0012 a0012	1	HG02622.hp1 HG02622.hp1	missense_variant	MODERATE	c.488A>G c.488A>G	p.Lys163Arg p.Lys163Arg	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	553/3569	488/2355	163/784	chr1	152156611
chr1:152156618	A A	G G	1	a0012 a0012	1	HG02622.hp1 HG02622.hp1	missense_variant	MODERATE	c.481T>C c.481T>C	p.Ser161Pro p.Ser161Pro	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	546/3569	481/2355	161/784	chr1	152156618
chr1:152156639	T T	C C	1	a0012 a0012	1	HG02622.hp1 HG02622.hp1	missense_variant	MODERATE	c.460A>G c.460A>G	p.Arg154Gly p.Arg154Gly	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	525/3569	460/2355	154/784	chr1	152156639
chr1:152156675	C C	T T	1	a0021 a0021	1	NA18522.hp2 NA18522.hp2	missense_variant	MODERATE	c.424G>A c.424G>A	p.Gly142Arg p.Gly142Arg	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	489/3569	424/2355	142/784	chr1	152156675
chr1:152156929	A A	T T	1	a0022 a0022	1	NA18964.hp1 NA18964.hp1	missense_variant	MODERATE	c.170T>A c.170T>A	p.Ile57Asn p.Ile57Asn	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	235/3569	170/2355	57/784	chr1	152156929

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:152155113	G G	T T	1	a0001c0021 a0001c0021	1	HG02615.hp2 HG02615.hp2	synonymous_variant	LOW	c.1986C>A c.1986C>A	p.Leu662Leu p.Leu662Leu	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	2051/3569	1986/2355	662/784	chr1	152155113
chr1:152155206	G G	A A	1	a0002c0017 a0002c0017	1	NA18982.hp2 NA18982.hp2	synonymous_variant	LOW	c.1893C>T c.1893C>T	p.Asn631Asn p.Asn631Asn	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1958/3569	1893/2355	631/784	chr1	152155206
chr1:152155317	T T	C C	1	a0005c0005 a0005c0005	6	HG00438.hp2 HG02040.hp1 HG02040.hp2 others(3): Show HG00438.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02080.hp1 HG02083.hp2	synonymous_variant	LOW	c.1782A>G c.1782A>G	p.Gln594Gln p.Gln594Gln	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1847/3569	1782/2355	594/784	chr1	152155317
chr1:152155590	G G	A A	2	a0002c0007 a0006c0015 a0002c0007 a0006c0015	5	HG00323.hp2 HG02451.hp1 HG03130.hp1 others(2): Show HG00323.hp2 HG02451.hp1 HG03130.hp1 HG03471.hp2 NA19240.hp1	synonymous_variant	LOW	c.1509C>T c.1509C>T	p.Asp503Asp p.Asp503Asp	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1574/3569	1509/2355	503/784	chr1	152155590
chr1:152155674	G G	A A	1	a0014c0022 a0014c0022	1	NA19055.hp1 NA19055.hp1	synonymous_variant	LOW	c.1425C>T c.1425C>T	p.Tyr475Tyr p.Tyr475Tyr	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1490/3569	1425/2355	475/784	chr1	152155674
chr1:152156121	G G	A A	1	a0001c0024 a0001c0024	1	HG03688.hp2 HG03688.hp2	synonymous_variant	LOW	c.978C>T c.978C>T	p.Gly326Gly p.Gly326Gly	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	1043/3569	978/2355	326/784	chr1	152156121

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:152153774	T T	C C	1	a0002c0002t0009 a0002c0002t0009	1	NA18969.hp1 NA18969.hp1	3_prime_UTR_variant	MODIFIER	c.970A>G c.970A>G	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	970	chr1	152153774
chr1:152153991	T T	C C	26	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(23): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0002c0002t0001 a0002c0002t0004 a0002c0002t0009 a0002c0007t0001 a0002c0017t0001 a0003c0003t0001 a0004c0004t0001 a0005c0005t0001 a0006c0006t0001 a0006c0015t0001 a0010c0009t0001 a0011c0010t0001 a0012c0027t0001 a0013c0025t0001 a0014c0022t0001 a0015c0020t0001 a0016c0019t0001 a0017c0018t0003 a0018c0023t0001 a0019c0026t0001 a0020c0016t0001 a0022c0013t0001	274	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(271): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02738.hp1 HG02809.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18943.hp1 NA18943.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp2 NA18978.hp2 NA18979.hp2 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18985.hp1 NA18985.hp2 NA18987.hp1 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19059.hp2 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19077.hp1 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.753A>G c.753A>G	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	753	chr1	152153991
chr1:152154118	A A	G G	1	a0002c0002t0004 a0002c0002t0004	6	HG02280.hp2 HG02451.hp2 HG02809.hp1 others(3): Show HG02280.hp2 HG02451.hp2 HG02809.hp1 HG02970.hp1 HG03453.hp2 HG03516.hp1	3_prime_UTR_variant	MODIFIER	c.626T>C c.626T>C	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	626	chr1	152154118
chr1:152154207	A A	ATT ATT	3	a0001c0001t0007 a0001c0001t0010 a0021c0014t0008 a0001c0001t0007 a0001c0001t0010 a0021c0014t0008	3	HG02965.hp1 HG02965.hp2 NA18522.hp2 HG02965.hp1 HG02965.hp2 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.535_536dupAA c.535_536dupAA	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	536	chr1	152154207
chr1:152154211	C C	T T	3	a0001c0001t0007 a0001c0001t0010 a0021c0014t0008 a0001c0001t0007 a0001c0001t0010 a0021c0014t0008	3	HG02965.hp1 HG02965.hp2 NA18522.hp2 HG02965.hp1 HG02965.hp2 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.533G>A c.533G>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	533	chr1	152154211
chr1:152154457	TA TA	T T	3	a0001c0001t0003 a0001c0001t0011 a0017c0018t0003 a0001c0001t0003 a0001c0001t0011 a0017c0018t0003	27	HG00544.hp2 HG01069.hp2 HG01071.hp1 others(24): Show HG00544.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp1 HG01192.hp1 HG02004.hp1 HG02055.hp1 HG02165.hp2 HG02630.hp2 HG02698.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03491.hp2 HG04199.hp1 HG04204.hp1 NA18970.hp1 NA18993.hp2 NA19055.hp2 NA19070.hp1 NA19079.hp2 NA19085.hp1	3_prime_UTR_variant	MODIFIER	c.286delT c.286delT	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	286	chr1	152154457
chr1:152154460	G G	C C	3	a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010	6	HG00140.hp2 HG00423.hp2 HG02129.hp1 others(3): Show HG00140.hp2 HG00423.hp2 HG02129.hp1 HG02965.hp2 NA18946.hp1 NA18949.hp2	3_prime_UTR_variant	MODIFIER	c.284C>G c.284C>G	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	284	chr1	152154460
chr1:152154460	G G	T T	1	a0001c0001t0007 a0001c0001t0007	1	HG02965.hp1 HG02965.hp1	3_prime_UTR_variant	MODIFIER	c.284C>A c.284C>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	284	chr1	152154460
chr1:152154461	G G	C C	1	a0001c0001t0011 a0001c0001t0011	1	HG03041.hp1 HG03041.hp1	3_prime_UTR_variant	MODIFIER	c.283C>G c.283C>G	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	3/3	283	chr1	152154461

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr1:152157106	C C	T T	1	a0005c0005t0001g0028 a0005c0005t0001g0028	2	HG00438.hp2 HG02083.hp2 HG00438.hp2 HG02083.hp2	intron_variant	MODIFIER	c.139-146G>A c.139-146G>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157106
chr1:152157401	G G	T T	1	a0001c0001t0002g0044 a0001c0001t0002g0044	1	NA19070.hp2 NA19070.hp2	intron_variant	MODIFIER	c.138+351C>A c.138+351C>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157401
chr1:152157419	C C	T T	1	a0002c0002t0004g0037 a0002c0002t0004g0037	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.138+333G>A c.138+333G>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157419
chr1:152157444	T T	C C	1	a0004c0004t0001g0058 a0004c0004t0001g0058	1	HG01516.hp1 HG01516.hp1	intron_variant	MODIFIER	c.138+308A>G c.138+308A>G	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157444
chr1:152157449	A A	G G	1	a0002c0002t0001g0011 a0002c0002t0001g0011	5	HG02486.hp1 HG02630.hp1 HG02717.hp1 others(2): Show HG02486.hp1 HG02630.hp1 HG02717.hp1 HG03195.hp1 NA19030.hp1	intron_variant	MODIFIER	c.138+303T>C c.138+303T>C	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157449
chr1:152157558	G G	GGT GGT	30	a0001c0001t0001g0003 a0001c0001t0001g0022 a0001c0001t0002g0001 others(27): Show a0001c0001t0001g0003 a0001c0001t0001g0022 a0001c0001t0002g0001 a0001c0001t0002g0039 a0001c0001t0002g0044 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0003g0016 a0001c0001t0005g0027 a0001c0001t0006g0051 a0001c0024t0002g0055 a0002c0002t0001g0002 a0002c0002t0004g0015 a0002c0002t0009g0047 a0002c0017t0001g0048 a0004c0004t0001g0007 a0004c0004t0001g0058 a0005c0005t0001g0018 a0006c0006t0001g0046 a0007c0008t0002g0017 a0008c0012t0002g0053 a0010c0009t0001g0025 a0011c0010t0001g0026 a0013c0025t0001g0056 a0014c0022t0001g0052 a0015c0020t0001g0050 a0016c0019t0001g0049 a0018c0023t0001g0054 a0019c0026t0001g0057 a0022c0013t0001g0045	265	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(262): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02486.hp2 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02683.hp2 HG02698.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03209.hp2 HG03239.hp2 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp1 NA18943.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18985.hp1 NA18985.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp2	intron_variant	MODIFIER	c.138+192_138+193dup others(2): Show c.138+192_138+193dupAC	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157558
chr1:152157558	G G	GGTGT GGTGT	3	a0001c0001t0001g0024 a0001c0001t0002g0014 a0002c0002t0001g0043 a0001c0001t0001g0024 a0001c0001t0002g0014 a0002c0002t0001g0043	7	HG01243.hp2 HG01934.hp1 HG01934.hp2 others(4): Show HG01243.hp2 HG01934.hp1 HG01934.hp2 NA18978.hp1 NA18999.hp2 NA19005.hp2 NA19043.hp1	intron_variant	MODIFIER	c.138+190_138+193dup others(4): Show c.138+190_138+193dupACAC	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157558
chr1:152157558	GGT GGT	G G	13	a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0002g0009 others(10): Show a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0003g0031 a0001c0001t0006g0069 a0001c0001t0011g0070 a0001c0021t0002g0041 a0002c0002t0001g0029 a0002c0002t0001g0036 a0003c0003t0001g0068 a0005c0005t0001g0071 a0009c0011t0002g0030	27	HG00140.hp2 HG00735.hp2 HG01168.hp1 others(24): Show HG00140.hp2 HG00735.hp2 HG01168.hp1 HG01169.hp2 HG01515.hp1 HG01517.hp2 HG02056.hp1 HG02109.hp2 HG02257.hp2 HG02300.hp1 HG02615.hp2 HG02818.hp1 HG02896.hp1 HG02922.hp1 HG02922.hp2 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03471.hp1 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03831.hp1 HG03927.hp1 NA18906.hp2 NA19240.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.138+192_138+193del others(2): Show c.138+192_138+193delAC	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157558
chr1:152157558	GGTGT GGTGT	G G	5	a0001c0001t0001g0020 a0001c0001t0002g0042 a0001c0001t0002g0072 others(2): Show a0001c0001t0001g0020 a0001c0001t0002g0042 a0001c0001t0002g0072 a0003c0003t0001g0033 a0008c0012t0002g0073	8	HG00280.hp1 HG01192.hp2 HG02559.hp1 others(5): Show HG00280.hp1 HG01192.hp2 HG02559.hp1 HG02717.hp2 HG02723.hp1 HG06807.hp2 NA18906.hp1 NA20129.hp2	intron_variant	MODIFIER	c.138+190_138+193del others(4): Show c.138+190_138+193delACAC	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157558
chr1:152157558	GGTGTGT GGTGTGT	G G	1	a0001c0001t0002g0021 a0001c0001t0002g0021	3	HG01358.hp1 HG02602.hp1 HG03834.hp2 HG01358.hp1 HG02602.hp1 HG03834.hp2	intron_variant	MODIFIER	c.138+188_138+193del others(6): Show c.138+188_138+193delACACAC	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157558
chr1:152157558	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	G G	1	a0001c0001t0003g0034 a0001c0001t0003g0034	2	HG01069.hp2 HG01071.hp1 HG01069.hp2 HG01071.hp1	intron_variant	MODIFIER	c.138+180_138+193del others(14): Show c.138+180_138+193delACACACACACACAC	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	2/2	chr1	152157558
chr1:152158000	G G	A A	1	a0001c0001t0002g0074 a0001c0001t0002g0074	1	NA18962.hp1 NA18962.hp1	intron_variant	MODIFIER	c.-20-91C>T c.-20-91C>T	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158000
chr1:152158063	C C	T T	5	a0001c0001t0002g0009 a0001c0001t0002g0039 a0001c0001t0002g0040 others(2): Show a0001c0001t0002g0009 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0021t0002g0041	11	HG02257.hp2 HG02615.hp2 HG02622.hp2 others(8): Show HG02257.hp2 HG02615.hp2 HG02622.hp2 HG02818.hp1 HG03130.hp2 HG03209.hp2 HG03516.hp2 HG03579.hp1 HG06807.hp2 NA18906.hp2 NA19240.hp2	intron_variant	MODIFIER	c.-20-154G>A c.-20-154G>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158063
chr1:152158064	G G	A A	1	a0001c0001t0002g0075 a0001c0001t0002g0075	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.-20-155C>T c.-20-155C>T	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158064
chr1:152158296	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	HG02109.hp2 HG02109.hp2	intron_variant	MODIFIER	c.-20-387G>A c.-20-387G>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158296
chr1:152158407	C C	T T	7	a0002c0002t0001g0011 a0002c0002t0001g0035 a0002c0002t0001g0036 others(4): Show a0002c0002t0001g0011 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0004g0015 a0002c0002t0004g0023 a0002c0002t0004g0037 a0002c0007t0001g0013	17	HG02280.hp2 HG02451.hp1 HG02451.hp2 others(14): Show HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02630.hp1 HG02717.hp1 HG02809.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA19240.hp1	intron_variant	MODIFIER	c.-20-498G>A c.-20-498G>A	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158407
chr1:152158500	A A	G G	2	a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0035 a0002c0002t0001g0036	2	HG03471.hp1 NA19030.hp2 HG03471.hp1 NA19030.hp2	intron_variant	MODIFIER	c.-20-591T>C c.-20-591T>C	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158500
chr1:152158987	G G	A A	1	a0002c0002t0001g0076 a0002c0002t0001g0076	1	HG00673.hp1 HG00673.hp1	intron_variant	MODIFIER	c.-21+197C>T c.-21+197C>T	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152158987
chr1:152159128	A A	C C	1	a0001c0001t0001g0022 a0001c0001t0001g0022	2	NA19059.hp2 NA19089.hp2 NA19059.hp2 NA19089.hp2	intron_variant	MODIFIER	c.-21+56T>G c.-21+56T>G	RPTN	ENSG00000215853.3	transcript	ENST00000316073.3	protein_coding	1/2	chr1	152159128

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🧬 JoGo Online Haplotype Explorer RPTN_chr1_152148595_152164228

JoGo Local Haplotype Explorer (on iGV) RPTN_chr1_152148595_152164228

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 22)

CCoding Level Haplotype Info (Total: 27)

TTranscript Level Haplotype Info (Total: 11)

GGenebody Level Haplotype Info (Total: 76)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 27)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 36)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 76)

Haplotype Details by Sample (Haploid Level) (Total: 422)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 24)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 9)

GGenebody Level Haplotype Variants (Intron) (Total: 19)

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Annotation (Repeats)

Annotation (SNP Array)