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geneid	548593
ensemblid	ENSG00000132207.18
hgncid	20922
symbol	SLX1A
name	SLX1 homolog A, structure-specific endonuclease subunit
refseq_nuc	NM_001014999.3
refseq_prot	NP_001014999.1
ensembl_nuc	ENST00000251303.11
ensembl_prot	ENSP00000251303.7
mane_status	MANE Select
chr	chr16
start	30193875
end	30197561
strand	+
ver	v1.2
region	chr16:30193875-30197561
region5000	chr16:30188875-30202561
regionname0	SLX1A_chr16_30193875_30197561
regionname5000	SLX1A_chr16_30188875_30202561

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	275	186	47	25	92	8	14	76	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0002	0/0	275	5	5	0	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0003	0/0	163	1	0	0	0	0	1	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0004	0/0	275	1	0	0	0	0	1	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0005	0/0	275	1	0	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	828	186	47	25	92	8	14	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
c0002	0/0	828	3	3	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
c0003	0/0	828	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
c0004	0/0	828	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
c0005	0/0	828	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
c0006	0/0	828	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	306	193	52	26	91	8	16	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
t0002	0/0	306	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	87	14	10	53	4	6	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0002	0/0	22	2	5	8	2	5	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0003	0/0	13	0	0	13	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0004	0/0	12	8	2	1	1	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0005	0/0	11	7	0	3	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0006	0/0	8	8	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0007	0/0	4	4	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0008	0/0	4	0	3	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0009	0/0	3	0	3	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0010	0/0	3	0	0	1	0	2	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0011	0/0	3	0	0	3	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0012	0/0	2	1	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0013	0/0	2	0	0	2	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0014	0/0	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0015	0/0	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0016	0/0	2	1	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0017	0/0	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0018	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0019	0/0	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0020	0/0	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0021	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0022	0/0	1	0	0	0	1	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0023	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0024	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0025	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0026	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0027	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0028	0/0	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0029	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
g0030	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	828	186	47	25	92	8	14	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0002c0002	0/0	828	3	3	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0002c0003	0/0	828	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0003c0006	0/0	828	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0004c0004	0/0	828	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0005c0005	0/0	828	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1133	185	47	25	91	8	14	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0001c0001t0002	0/0	1133	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0002c0002t0001	0/0	1133	3	3	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0002c0003t0001	0/0	1133	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0003c0006t0001	0/0	1133	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0004c0004t0001	0/0	1133	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561
a0005c0005t0001	0/0	1133	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	copy fasta	chr16	30188875	30202561

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	83	12	10	52	4	5	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0002	0/0	21	2	5	8	2	4	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0003	0/0	13	0	0	13	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0004	0/0	12	8	2	1	1	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0005	0/0	11	7	0	3	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0006	0/0	8	8	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0007	0/0	4	4	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0008	0/0	4	0	3	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0009	0/0	3	0	3	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0010	0/0	3	0	0	1	0	2	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0011	0/0	3	0	0	3	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0012	0/0	2	1	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0013	0/0	2	0	0	2	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0016	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0017	0/0	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0018	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0019	0/0	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0021	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0022	0/0	1	0	0	0	1	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0023	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0024	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0027	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0028	0/0	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0001c0001t0002g0001	0/0	1	0	0	1	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0002c0002t0001g0001	0/0	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0002c0002t0001g0016	0/0	1	1	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0002c0003t0001g0014	0/0	2	2	0	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0003c0006t0001g0002	0/0	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0004c0004t0001g0001	0/0	1	0	0	0	0	1	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
a0005c0005t0001g0020	0/0	1	0	1	0	0	0	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0002	EUR	GBR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00323	hp1	a0001	c0001	t0001	g0004	EUR	FIN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00642	hp1	a0001	c0001	t0001	g0008	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00642	hp2	a0001	c0001	t0001	g0004	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00735	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01081	hp1	a0001	c0001	t0001	g0008	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01081	hp2	a0001	c0001	t0001	g0009	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01099	hp1	a0001	c0001	t0001	g0017	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01099	hp2	a0001	c0001	t0001	g0019	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01168	hp1	a0001	c0001	t0001	g0009	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01255	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01255	hp2	a0001	c0001	t0001	g0008	AMR	CLM	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01261	hp1	a0005	c0005	t0001	g0020	AMR	CLM	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01346	hp1	a0001	c0001	t0001	g0004	AMR	CLM	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01346	hp2	a0001	c0001	t0001	g0009	AMR	CLM	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01515	hp1	a0001	c0001	t0001	g0022	EUR	IBS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01884	hp2	a0001	c0001	t0001	g0007	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01891	hp2	a0001	c0001	t0001	g0006	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG01981	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02055	hp1	a0001	c0001	t0001	g0015	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02055	hp2	a0001	c0001	t0001	g0007	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02056	hp2	a0001	c0001	t0001	g0005	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02074	hp2	a0001	c0001	t0001	g0003	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02129	hp2	a0001	c0001	t0001	g0003	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02145	hp1	a0001	c0001	t0001	g0029	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02145	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02523	hp2	a0001	c0001	t0001	g0003	EAS	KHV	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02630	hp2	a0001	c0001	t0001	g0006	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02647	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02717	hp1	a0001	c0001	t0001	g0004	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02717	hp2	a0001	c0001	t0001	g0004	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02818	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02818	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02886	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02896	hp2	a0001	c0001	t0001	g0012	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02965	hp1	a0001	c0001	t0001	g0015	AFR	ESN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02965	hp2	a0001	c0001	t0001	g0006	AFR	ESN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03041	hp1	a0001	c0001	t0001	g0007	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03041	hp2	a0002	c0002	t0001	g0001	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03098	hp2	a0001	c0001	t0001	g0005	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03130	hp2	a0001	c0001	t0001	g0004	AFR	ESN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03225	hp1	a0001	c0001	t0001	g0004	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03225	hp2	a0001	c0001	t0001	g0001	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03453	hp1	a0002	c0003	t0001	g0014	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03453	hp2	a0001	c0001	t0001	g0005	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03486	hp1	a0001	c0001	t0001	g0006	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03486	hp2	a0001	c0001	t0001	g0026	AFR	MSL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03490	hp1	a0001	c0001	t0001	g0005	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03490	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03491	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03492	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03516	hp1	a0001	c0001	t0001	g0004	AFR	ESN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03516	hp2	a0001	c0001	t0001	g0021	AFR	ESN	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03540	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03669	hp1	a0001	c0001	t0001	g0010	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03669	hp2	a0001	c0001	t0001	g0008	SAS	PJL	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03831	hp2	a0003	c0006	t0001	g0002	SAS	BEB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG03834	hp2	a0001	c0001	t0001	g0028	SAS	BEB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG04184	hp1	a0004	c0004	t0001	g0001	SAS	BEB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG04184	hp2	a0001	c0001	t0001	g0010	SAS	BEB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18906	hp1	a0001	c0001	t0001	g0006	AFR	YRI	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18906	hp2	a0002	c0003	t0001	g0014	AFR	YRI	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18941	hp1	a0001	c0001	t0001	g0025	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18941	hp2	a0001	c0001	t0001	g0005	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18945	hp1	a0001	c0001	t0001	g0018	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18956	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18957	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18962	hp2	a0001	c0001	t0001	g0012	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18968	hp1	a0001	c0001	t0001	g0024	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18971	hp2	a0001	c0001	t0001	g0011	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18972	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18974	hp1	a0001	c0001	t0001	g0016	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18974	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18978	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18979	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18979	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18981	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18993	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18993	hp2	a0001	c0001	t0001	g0005	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19000	hp2	a0001	c0001	t0001	g0011	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19009	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19011	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19030	hp1	a0001	c0001	t0001	g0006	AFR	LWK	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19030	hp2	a0001	c0001	t0001	g0002	AFR	LWK	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19054	hp2	a0001	c0001	t0001	g0030	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19056	hp2	a0001	c0001	t0001	g0013	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19058	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19058	hp2	a0001	c0001	t0001	g0011	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19063	hp1	a0001	c0001	t0001	g0010	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19063	hp2	a0001	c0001	t0001	g0013	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19066	hp2	a0001	c0001	t0001	g0027	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19070	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19070	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19074	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19081	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19081	hp2	a0001	c0001	t0001	g0004	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19083	hp2	a0001	c0001	t0001	g0023	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19086	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19088	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19240	hp1	a0001	c0001	t0001	g0004	AFR	YRI	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA19240	hp2	a0001	c0001	t0001	g0004	AFR	YRI	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA20129	hp1	a0001	c0001	t0001	g0006	AFR	ASW	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA20752	hp2	a0001	c0001	t0001	g0002	EUR	TSI	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02109	hp1	a0001	c0001	t0001	g0004	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02486	hp1	a0002	c0002	t0001	g0001	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
HG02486	hp2	a0001	c0001	t0001	g0007	AFR	ACB	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA21309	hp1	a0002	c0002	t0001	g0016	AFR	LWK	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	SLX1A_chr16_30188875_30202561	SLX1A	chr16	30188875	30202561

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:30194085	A A	T T	1	a0003 a0003	1	HG03831.hp2 HG03831.hp2	initiator_codon_variant	LOW	c.1A>T c.1A>T	p.Met1? p.Met1?	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	1/6	211/1133	1/828	1/275	chr16	30194085
chr16:30194892	T T	A A	1	a0004 a0004	1	HG04184.hp1 HG04184.hp1	missense_variant	MODERATE	c.247T>A c.247T>A	p.Trp83Arg p.Trp83Arg	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/6	457/1133	247/828	83/275	chr16	30194892
chr16:30195153	T T	C C	1	a0005 a0005	1	HG01261.hp1 HG01261.hp1	missense_variant	MODERATE	c.508T>C c.508T>C	p.Phe170Leu p.Phe170Leu	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/6	718/1133	508/828	170/275	chr16	30195153
chr16:30196999	C C	T T	1	a0002 a0002	5	HG02486.hp1 HG03041.hp2 HG03453.hp1 others(2): Show HG02486.hp1 HG03041.hp2 HG03453.hp1 NA18906.hp2 NA21309.hp1	missense_variant	MODERATE	c.608C>T c.608C>T	p.Pro203Leu p.Pro203Leu	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	4/6	818/1133	608/828	203/275	chr16	30196999

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr16:30194162	C C	T T	1	a0002c0003 a0002c0003	2	HG03453.hp1 NA18906.hp2 HG03453.hp1 NA18906.hp2	synonymous_variant	LOW	c.78C>T c.78C>T	p.Tyr26Tyr p.Tyr26Tyr	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	1/6	288/1133	78/828	26/275			chr16	30194162

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr16:30193886	C C	G G	1	a0001c0001t0002 a0001c0001t0002	1	NA19074.hp2 NA19074.hp2	5_prime_UTR_variant	MODIFIER	c.-199C>G c.-199C>G		SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	1/6				199		chr16	30193886

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr16:30194486	G G	C C	7	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0003c0006t0001g0002	31	HG00140.hp1 HG00735.hp1 HG01081.hp2 others(28): Show HG00140.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01168.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01975.hp1 HG01981.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03669.hp1 HG03831.hp2 HG04184.hp2 NA18945.hp1 NA18946.hp1 NA18957.hp2 NA18979.hp1 NA19011.hp2 NA19030.hp2 NA19063.hp1 NA19070.hp2 NA19081.hp1 NA19086.hp1 NA19088.hp1 NA20752.hp2	intron_variant	MODIFIER	c.188+214G>C c.188+214G>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	1/5		chr16	30194486
chr16:30194614	C C	T T	7	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0003c0006t0001g0002	31	HG00140.hp1 HG00735.hp1 HG01081.hp2 others(28): Show HG00140.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01168.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01975.hp1 HG01981.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03669.hp1 HG03831.hp2 HG04184.hp2 NA18945.hp1 NA18946.hp1 NA18957.hp2 NA18979.hp1 NA19011.hp2 NA19030.hp2 NA19063.hp1 NA19070.hp2 NA19081.hp1 NA19086.hp1 NA19088.hp1 NA20752.hp2	intron_variant	MODIFIER	c.189-126C>T c.189-126C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	1/5		chr16	30194614
chr16:30194685	G G	C C	2	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0009 a0001c0001t0001g0017	4	HG01081.hp2 HG01099.hp1 HG01168.hp1 others(1): Show HG01081.hp2 HG01099.hp1 HG01168.hp1 HG01346.hp2	intron_variant	MODIFIER	c.189-55G>C c.189-55G>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	1/5		chr16	30194685
chr16:30195353	A A	G G	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	NA19054.hp2 NA19054.hp2	intron_variant	MODIFIER	c.582+126A>G c.582+126A>G	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195353
chr16:30195484	T T	C C	1	a0005c0005t0001g0020 a0005c0005t0001g0020	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.582+257T>C c.582+257T>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195484
chr16:30195485	C C	CT CT	11	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0015 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0002c0002t0001g0016 a0003c0006t0001g0002	34	HG00140.hp1 HG00735.hp1 HG01081.hp2 others(31): Show HG00140.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp2 HG01168.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01975.hp1 HG01981.hp2 HG02055.hp1 HG02145.hp1 HG02965.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03831.hp2 HG03834.hp2 NA18945.hp1 NA18946.hp1 NA18957.hp2 NA18974.hp1 NA18979.hp1 NA19011.hp2 NA19030.hp2 NA19066.hp2 NA19070.hp2 NA19081.hp1 NA19086.hp1 NA19088.hp1 NA20752.hp2 NA21309.hp1	intron_variant	MODIFIER	c.582+278dupT c.582+278dupT	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5	INFO_REALIGN_3_PRIME	chr16	30195485
chr16:30195485	C C	T T	1	a0005c0005t0001g0020 a0005c0005t0001g0020	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.582+258C>T c.582+258C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195485
chr16:30195485	CT CT	C C	4	a0001c0001t0001g0012 a0001c0001t0001g0021 a0001c0001t0001g0022 others(1): Show a0001c0001t0001g0012 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0030	5	HG01515.hp1 HG02896.hp2 HG03516.hp2 others(2): Show HG01515.hp1 HG02896.hp2 HG03516.hp2 NA18962.hp2 NA19054.hp2	intron_variant	MODIFIER	c.582+278delT c.582+278delT	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5	INFO_REALIGN_3_PRIME	chr16	30195485
chr16:30195526	C C	T T	1	a0001c0001t0001g0004 a0001c0001t0001g0004	12	HG00323.hp1 HG00642.hp2 HG01346.hp1 others(9): Show HG00323.hp1 HG00642.hp2 HG01346.hp1 HG02109.hp1 HG02717.hp1 HG02717.hp2 HG03130.hp2 HG03225.hp1 HG03516.hp1 NA19081.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.582+299C>T c.582+299C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195526
chr16:30195550	C C	T T	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.582+323C>T c.582+323C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195550
chr16:30195633	G G	C C	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG03516.hp2 HG03516.hp2	intron_variant	MODIFIER	c.582+406G>C c.582+406G>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195633
chr16:30195722	C C	T T	1	a0002c0003t0001g0014 a0002c0003t0001g0014	2	HG03453.hp1 NA18906.hp2 HG03453.hp1 NA18906.hp2	intron_variant	MODIFIER	c.582+495C>T c.582+495C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195722
chr16:30195908	G G	C C	1	a0005c0005t0001g0020 a0005c0005t0001g0020	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.582+681G>C c.582+681G>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195908
chr16:30195909	C C	G G	1	a0005c0005t0001g0020 a0005c0005t0001g0020	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.582+682C>G c.582+682C>G	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30195909
chr16:30196141	C C	CTATT CTATT	1	a0001c0001t0001g0008 a0001c0001t0001g0008	4	HG00642.hp1 HG01081.hp1 HG01255.hp2 others(1): Show HG00642.hp1 HG01081.hp1 HG01255.hp2 HG03669.hp2	intron_variant	MODIFIER	c.583-832_583-829dup others(4): Show c.583-832_583-829dupTATT	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5	INFO_REALIGN_3_PRIME	chr16	30196141
chr16:30196178	T T	C C	1	a0001c0001t0001g0007 a0001c0001t0001g0007	4	HG01884.hp2 HG02055.hp2 HG02486.hp2 others(1): Show HG01884.hp2 HG02055.hp2 HG02486.hp2 HG03041.hp1	intron_variant	MODIFIER	c.583-796T>C c.583-796T>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30196178
chr16:30196297	A A	AT AT	7	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0017 a0001c0001t0001g0029 a0003c0006t0001g0002	32	HG00140.hp1 HG00735.hp1 HG01081.hp2 others(29): Show HG00140.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01168.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01975.hp1 HG01981.hp2 HG02145.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03669.hp1 HG03831.hp2 HG04184.hp2 NA18946.hp1 NA18957.hp2 NA18979.hp1 NA19011.hp2 NA19030.hp2 NA19056.hp2 NA19063.hp1 NA19063.hp2 NA19070.hp2 NA19081.hp1 NA19086.hp1 NA19088.hp1 NA20752.hp2	intron_variant	MODIFIER	c.583-667dupT c.583-667dupT	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5	INFO_REALIGN_3_PRIME	chr16	30196297
chr16:30196297	A A	T T	3	a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0025	10	HG01099.hp2 HG01891.hp2 HG02630.hp2 others(7): Show HG01099.hp2 HG01891.hp2 HG02630.hp2 HG02818.hp1 HG02965.hp2 HG03486.hp1 NA18906.hp1 NA18941.hp1 NA19030.hp1 NA20129.hp1	intron_variant	MODIFIER	c.583-677A>T c.583-677A>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30196297
chr16:30196301	T T	A A	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG03516.hp2 HG03516.hp2	intron_variant	MODIFIER	c.583-673T>A c.583-673T>A	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30196301
chr16:30196495	T T	C C	1	a0001c0001t0001g0011 a0001c0001t0001g0011	3	NA18971.hp2 NA19000.hp2 NA19058.hp2 NA18971.hp2 NA19000.hp2 NA19058.hp2	intron_variant	MODIFIER	c.583-479T>C c.583-479T>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30196495
chr16:30196620	G G	C C	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	NA19083.hp2 NA19083.hp2	intron_variant	MODIFIER	c.583-354G>C c.583-354G>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	3/5		chr16	30196620
chr16:30197197	C C	T T	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.711-73C>T c.711-73C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	4/5		chr16	30197197
chr16:30197200	G G	C C	14	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(11): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0026 a0001c0001t0001g0029 a0003c0006t0001g0002	68	HG00140.hp1 HG00323.hp1 HG00642.hp2 others(65): Show HG00140.hp1 HG00323.hp1 HG00642.hp2 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01168.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01891.hp2 HG01975.hp1 HG01981.hp2 HG02055.hp1 HG02056.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02965.hp1 HG02965.hp2 HG03098.hp2 HG03130.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03669.hp1 HG03831.hp2 HG04184.hp2 NA18906.hp1 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18957.hp2 NA18979.hp1 NA18993.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp2 NA19063.hp1 NA19063.hp2 NA19070.hp2 NA19081.hp1 NA19081.hp2 NA19086.hp1 NA19088.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp2	intron_variant	MODIFIER	c.711-70G>C c.711-70G>C	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	4/5		chr16	30197200
chr16:30197206	C C	T T	6	a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0021 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030	19	HG02074.hp2 HG02129.hp2 HG02523.hp2 others(16): Show HG02074.hp2 HG02129.hp2 HG02523.hp2 HG02896.hp2 HG03516.hp2 HG03834.hp2 NA18956.hp2 NA18962.hp2 NA18972.hp2 NA18974.hp2 NA18978.hp1 NA18979.hp2 NA18981.hp2 NA18993.hp1 NA19009.hp2 NA19054.hp2 NA19058.hp1 NA19066.hp2 NA19070.hp1	intron_variant	MODIFIER	c.711-64C>T c.711-64C>T	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	4/5		chr16	30197206
chr16:30197254	C C	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	NA19066.hp2 NA19066.hp2	intron_variant	MODIFIER	c.711-16C>A c.711-16C>A	SLX1A	ENSG00000132207.18	transcript	ENST00000251303.11	protein_coding	4/5		chr16	30197254

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JoGo Local Haplotype Explorer (on iGV) SLX1A_chr16_30188875_30202561

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 6)

TTranscript Level Haplotype Info (Total: 2)

GGenebody Level Haplotype Info (Total: 30)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 6)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 7)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 35)

Haplotype Details by Sample (Haploid Level) (Total: 194)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 1)

GGenebody Level Haplotype Variants (Intron) (Total: 25)

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Annotation (Repeats)

Annotation (SNP Array)