Joint Open Genome and Omics Platform (JoGo)

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geneid	647060
ensemblid	ENSG00000204849.10
hgncid	23394
symbol	SPATA31A1
name	SPATA31 subfamily A member 1
refseq_nuc	NM_001085452.4
refseq_prot	NP_001078921.3
ensembl_nuc	ENST00000377647.6
ensembl_prot	ENSP00000366875.5
mane_status	MANE Select
chr	chr9
start	39355669
end	39361962
strand	+
ver	v1.2
region	chr9:39355669-39361962
region5000	chr9:39350669-39366962
regionname0	SPATA31A1_chr9_39355669_39361962
regionname5000	SPATA31A1_chr9_39350669_39366962

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	1347	215	37	40	103	5	29	82	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002	0/0	1347	100	9	17	66	3	5	53	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003	0/0	1347	35	1	9	21	0	4	16	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0004	0/0	1347	10	0	9	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0005	0/0	1347	6	0	0	6	0	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0006	1/0	1347	4	2	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0007	0/0	1347	4	0	3	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0008	0/0	1347	3	3	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0009	0/0	1347	3	2	0	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0010	0/0	1347	2	1	0	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0011	0/0	1347	2	2	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0012	0/0	1347	2	2	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0013	0/0	1347	2	2	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0014	0/0	1347	2	2	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0015	0/0	1347	2	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0016	0/0	1347	2	0	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0017	0/0	1347	2	0	0	2	0	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0018	0/0	1347	2	0	0	2	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0019	0/0	1347	2	0	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0020	0/0	1347	1	0	0	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0021	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0022	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0023	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0024	0/0	1347	1	0	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0025	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0026	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0027	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0028	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0029	0/0	1347	1	0	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0030	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0031	0/0	1347	1	0	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0032	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0033	0/0	1347	1	0	0	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0034	0/0	1347	1	0	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0035	0/0	1347	1	0	0	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0036	0/0	1347	1	0	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0037	0/0	1347	1	0	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0038	0/0	1347	1	0	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0039	0/0	1347	1	0	0	1	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0040	0/0	1347	1	0	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0041	0/0	1347	1	1	0	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0042	0/0	1347	1	0	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0043	0/0	1347	1	0	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	4044	118	17	12	84	0	5	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0002	0/0	4044	89	0	17	66	3	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0003	0/1	4044	65	12	26	3	4	19	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0004	0/0	4044	29	1	4	21	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0005	0/0	4044	22	4	2	13	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0006	0/0	4044	10	0	9	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0007	0/0	4044	7	7	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0008	0/0	4044	6	0	0	6	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0009	0/0	4044	5	0	5	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0010	1/0	4044	4	2	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0011	0/0	4044	4	0	3	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0012	0/0	4044	3	3	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0013	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0014	0/0	4044	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0015	0/0	4044	2	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0016	0/0	4044	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0017	0/0	4044	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0018	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0019	0/0	4044	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0020	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0021	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0022	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0023	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0024	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0025	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0026	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0027	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0028	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0029	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0030	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0031	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0032	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0033	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0034	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0035	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0036	0/0	4044	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0037	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0038	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0039	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0040	0/0	4044	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0041	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0042	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0043	0/0	4044	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0044	0/0	4044	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0045	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0046	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0047	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0048	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0049	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0050	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0051	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0052	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0053	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0054	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0055	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0056	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0057	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0058	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0059	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0060	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0061	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0062	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0063	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
c0064	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	216	311	36	52	195	4	23	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0002	0/1	216	103	31	32	15	6	18	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0003	0/0	216	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0004	0/0	216	2	0	0	1	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0005	0/0	216	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0006	0/0	216	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0007	0/0	216	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0008	0/0	216	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
t0009	0/0	216	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	162	11	19	113	4	15	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0002	0/0	39	1	10	25	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0003	0/0	30	1	10	18	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0004	0/0	20	4	10	3	1	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0005	0/0	16	1	2	11	1	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0006	0/0	14	3	1	7	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0007	0/0	9	0	8	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0008	0/0	8	0	5	0	1	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0009	0/0	7	5	1	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0010	0/0	6	1	0	3	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0011	1/0	6	4	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0012	0/0	5	1	0	4	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0013	0/0	5	0	0	2	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0014	0/0	5	0	0	5	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0015	0/0	4	4	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0016	0/0	3	0	3	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0017	0/0	3	0	0	3	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0018	0/0	3	3	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0019	0/0	3	0	3	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0020	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0021	0/0	2	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0022	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0023	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0024	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0025	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0026	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0027	0/0	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0028	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0029	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0030	0/0	2	1	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0031	0/0	2	0	1	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0032	0/1	2	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0033	0/0	2	0	0	0	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0034	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0035	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0036	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0037	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0038	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0039	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0040	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0041	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0042	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0043	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0044	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0045	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0046	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0047	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0048	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0049	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0050	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0051	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0052	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0053	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0054	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0055	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0056	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0057	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0058	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0059	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0060	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0061	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0062	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0063	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0064	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0065	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0066	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0067	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0068	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0069	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0070	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0071	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0072	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0073	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0074	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0075	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0076	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0077	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0078	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0079	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
g0080	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	4044	118	17	12	84	0	5	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0003	0/1	4044	65	12	26	3	4	19	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0005	0/0	4044	22	4	2	13	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0021	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0023	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0025	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0041	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0044	0/0	4044	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0058	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0059	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0060	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0061	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0002	0/0	4044	89	0	17	66	3	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0007	0/0	4044	7	7	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0018	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0039	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0063	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0004	0/0	4044	29	1	4	21	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0009	0/0	4044	5	0	5	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0024	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0004c0006	0/0	4044	10	0	9	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0005c0008	0/0	4044	6	0	0	6	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0006c0010	1/0	4044	4	2	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0007c0011	0/0	4044	4	0	3	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0008c0012	0/0	4044	3	3	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0009c0022	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0009c0062	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0010c0027	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0010c0028	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0011c0013	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0012c0056	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0012c0057	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0013c0034	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0013c0052	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0014c0020	0/0	4044	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0015c0015	0/0	4044	2	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0016c0014	0/0	4044	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0017c0016	0/0	4044	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0018c0019	0/0	4044	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0019c0017	0/0	4044	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0020c0064	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0021c0026	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0022c0055	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0023c0054	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0024c0053	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0025c0035	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0026c0049	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0027c0042	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0028c0047	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0029c0033	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0030c0045	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0031c0032	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0032c0046	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0033c0031	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0034c0043	0/0	4044	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0035c0048	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0036c0036	0/0	4044	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0037c0050	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0038c0040	0/0	4044	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0039c0038	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0040c0037	0/0	4044	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0041c0051	0/0	4044	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0042c0030	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0043c0029	0/0	4044	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	4259	115	16	12	83	0	4	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0001t0004	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0001t0006	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0001t0008	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0003t0001	0/0	4259	10	2	0	1	0	7	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0003t0002	0/1	4259	53	8	26	2	4	12	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0003t0005	0/0	4259	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0005t0002	0/0	4259	22	4	2	13	0	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0021t0002	0/0	4259	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0023t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0025t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0041t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0044t0002	0/0	4259	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0058t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0059t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0060t0002	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0001c0061t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0002t0001	0/0	4259	89	0	17	66	3	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0007t0001	0/0	4259	7	7	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0018t0002	0/0	4259	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0039t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0002c0063t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0004t0001	0/0	4259	27	0	4	21	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0004t0002	0/0	4259	2	1	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0009t0001	0/0	4259	5	0	5	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0003c0024t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0004c0006t0001	0/0	4259	10	0	9	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0005c0008t0001	0/0	4259	6	0	0	6	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0006c0010t0001	1/0	4259	4	2	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0007c0011t0002	0/0	4259	4	0	3	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0008c0012t0001	0/0	4259	3	3	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0009c0022t0002	0/0	4259	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0009c0062t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0010c0027t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0010c0028t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0011c0013t0001	0/0	4259	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0012c0056t0003	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0012c0057t0003	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0013c0034t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0013c0052t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0014c0020t0002	0/0	4259	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0015c0015t0001	0/0	4259	2	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0016c0014t0001	0/0	4259	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0017c0016t0001	0/0	4259	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0018c0019t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0018c0019t0004	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0019c0017t0001	0/0	4259	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0020c0064t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0021c0026t0009	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0022c0055t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0023c0054t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0024c0053t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0025c0035t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0026c0049t0001	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0027c0042t0007	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0028c0047t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0029c0033t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0030c0045t0001	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0031c0032t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0032c0046t0001	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0033c0031t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0034c0043t0002	0/0	4259	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0035c0048t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0036c0036t0001	0/0	4259	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0037c0050t0002	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0038c0040t0001	0/0	4259	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0039c0038t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0040c0037t0001	0/0	4259	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0041c0051t0002	0/0	4259	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0042c0030t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962
a0043c0029t0001	0/0	4259	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	copy fasta	chr9	39350669	39366962

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	69	10	2	55	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0003	0/0	13	1	1	11	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0004	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0005	0/0	2	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0007	0/0	6	0	6	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0013	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0014	0/0	5	0	0	5	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0015	0/0	4	4	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0017	0/0	3	0	0	3	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0033	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0034	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0047	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0053	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0058	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0064	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0070	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0001g0075	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0004g0072	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0006g0001	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0001t0008g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0001g0001	0/0	5	0	0	0	0	5	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0001g0003	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0001g0004	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0001g0060	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0001g0066	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0001g0076	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0001	0/0	4	0	3	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0002	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0004	0/0	17	3	10	1	1	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0005	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0006	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0008	0/0	8	0	5	0	1	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0010	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0013	0/0	2	0	0	0	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0016	0/0	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0024	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0027	0/0	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0032	0/1	2	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0033	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0048	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0050	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0054	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0055	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0056	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0061	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0065	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0068	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0071	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0002g0080	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0005g0073	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0003t0005g0074	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0005t0002g0006	0/0	11	1	1	7	0	2	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0005t0002g0009	0/0	5	3	1	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0005t0002g0010	0/0	4	0	0	3	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0005t0002g0023	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0021t0002g0020	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0023t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0025t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0041t0002g0029	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0044t0002g0005	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0058t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0059t0001g0001	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0060t0002g0013	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0001c0061t0002g0069	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0001	0/0	64	0	14	44	3	3	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0002	0/0	2	0	1	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0003	0/0	6	0	0	6	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0005	0/0	10	0	0	10	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0007	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0031	0/0	2	0	1	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0035	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0059	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0062	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0002t0001g0078	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0007t0001g0018	0/0	3	3	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0007t0001g0028	0/0	2	2	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0007t0001g0043	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0007t0001g0067	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0018t0002g0006	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0018t0002g0009	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0039t0001g0001	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0002c0063t0001g0001	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0001g0002	0/0	22	0	3	18	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0001g0012	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0001g0036	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0001g0038	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0001g0040	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0002g0010	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0004t0002g0079	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0009t0001g0002	0/0	5	0	5	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0003c0024t0001g0002	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0004c0006t0001g0003	0/0	10	0	9	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0005c0008t0001g0002	0/0	4	0	0	4	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0005c0008t0001g0012	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0006c0010t0001g0011	1/0	3	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0006c0010t0001g0025	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0007c0011t0002g0019	0/0	3	0	3	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0007c0011t0002g0077	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0008c0012t0001g0011	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0008c0012t0001g0025	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0008c0012t0001g0026	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0009c0022t0002g0045	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0009c0022t0002g0046	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0009c0062t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0010c0027t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0010c0028t0002g0041	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0011c0013t0001g0011	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0011c0013t0001g0026	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0012c0056t0003g0022	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0012c0057t0003g0022	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0013c0034t0002g0024	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0013c0052t0002g0009	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0014c0020t0002g0012	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0014c0020t0002g0042	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0015c0015t0001g0021	0/0	2	1	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0016c0014t0001g0007	0/0	2	0	2	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0017c0016t0001g0001	0/0	2	0	0	2	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0018c0019t0001g0013	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0018c0019t0004g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0019c0017t0001g0004	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0019c0017t0001g0005	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0020c0064t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0021c0026t0009g0011	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0022c0055t0002g0039	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0023c0054t0002g0044	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0024c0053t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0025c0035t0002g0051	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0026c0049t0001g0037	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0027c0042t0007g0052	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0028c0047t0002g0049	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0029c0033t0001g0001	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0030c0045t0001g0057	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0031c0032t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0032c0046t0001g0029	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0033c0031t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0034c0043t0002g0016	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0035c0048t0001g0002	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0036c0036t0001g0002	0/0	1	0	1	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0037c0050t0002g0006	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0038c0040t0001g0001	0/0	1	0	0	0	1	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0039c0038t0001g0001	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0040c0037t0001g0002	0/0	1	0	0	1	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0041c0051t0002g0030	0/0	1	1	0	0	0	0	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0042c0030t0001g0005	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
a0043c0029t0001g0002	0/0	1	0	0	0	0	1	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0002	c0002	t0001	g0001	EUR	GBR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00099	hp2	a0001	c0003	t0002	g0061	EUR	GBR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00140	hp1	a0002	c0002	t0001	g0001	EUR	GBR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00140	hp2	a0002	c0002	t0001	g0001	EUR	GBR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00408	hp1	a0001	c0003	t0002	g0004	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00423	hp1	a0003	c0004	t0001	g0002	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00423	hp2	a0002	c0002	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00438	hp1	a0002	c0002	t0001	g0003	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00438	hp2	a0003	c0004	t0001	g0002	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00544	hp2	a0003	c0004	t0001	g0002	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00558	hp2	a0040	c0037	t0001	g0002	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00597	hp1	a0005	c0008	t0001	g0012	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00597	hp2	a0003	c0004	t0001	g0002	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00609	hp2	a0001	c0005	t0002	g0009	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00621	hp1	a0001	c0058	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00621	hp2	a0001	c0001	t0001	g0047	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00639	hp1	a0001	c0003	t0002	g0008	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00639	hp2	a0001	c0001	t0001	g0075	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00642	hp1	a0001	c0001	t0001	g0005	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00642	hp2	a0001	c0003	t0002	g0005	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00673	hp1	a0003	c0004	t0001	g0002	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00673	hp2	a0001	c0023	t0001	g0001	EAS	CHS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00733	hp1	a0007	c0011	t0002	g0019	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00733	hp2	a0001	c0003	t0002	g0054	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00735	hp1	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00735	hp2	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00738	hp1	a0003	c0004	t0001	g0036	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00738	hp2	a0001	c0003	t0002	g0004	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00741	hp1	a0001	c0003	t0002	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG00741	hp2	a0001	c0003	t0002	g0065	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01069	hp1	a0001	c0003	t0002	g0027	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01069	hp2	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01070	hp1	a0001	c0003	t0002	g0004	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01070	hp2	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01071	hp1	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01071	hp2	a0001	c0003	t0002	g0027	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01074	hp1	a0007	c0011	t0002	g0019	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01074	hp2	a0004	c0006	t0001	g0003	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01081	hp1	a0001	c0003	t0002	g0004	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01081	hp2	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01099	hp1	a0003	c0004	t0001	g0002	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01099	hp2	a0004	c0006	t0001	g0003	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01106	hp1	a0002	c0002	t0001	g0001	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01106	hp2	a0034	c0043	t0002	g0016	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01109	hp1	a0001	c0003	t0002	g0004	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01109	hp2	a0001	c0005	t0002	g0009	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01168	hp1	a0001	c0003	t0002	g0016	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01168	hp2	a0016	c0014	t0001	g0007	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01169	hp1	a0016	c0014	t0001	g0007	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01169	hp2	a0001	c0003	t0002	g0008	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01175	hp1	a0001	c0003	t0002	g0008	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01175	hp2	a0001	c0005	t0002	g0006	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01192	hp1	a0001	c0003	t0002	g0004	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01192	hp2	a0004	c0006	t0001	g0003	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01243	hp1	a0015	c0015	t0001	g0021	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01243	hp2	a0004	c0006	t0001	g0003	AMR	PUR	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01255	hp1	a0001	c0003	t0002	g0001	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01255	hp2	a0001	c0001	t0001	g0064	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01256	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01256	hp2	a0001	c0003	t0002	g0004	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01257	hp1	a0001	c0003	t0002	g0008	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01257	hp2	a0001	c0003	t0002	g0016	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01258	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01258	hp2	a0001	c0003	t0002	g0008	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01261	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01261	hp2	a0003	c0009	t0001	g0002	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01346	hp1	a0001	c0003	t0002	g0004	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01346	hp2	a0036	c0036	t0001	g0002	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01358	hp1	a0003	c0009	t0001	g0002	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01358	hp2	a0001	c0003	t0002	g0032	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01361	hp1	a0003	c0009	t0001	g0002	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01361	hp2	a0001	c0003	t0002	g0004	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01433	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01433	hp2	a0004	c0006	t0001	g0003	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01496	hp1	a0006	c0010	t0001	g0011	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01496	hp2	a0002	c0002	t0001	g0001	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01516	hp1	a0001	c0003	t0002	g0004	EUR	IBS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01516	hp2	a0001	c0003	t0002	g0068	EUR	IBS	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01884	hp1	a0028	c0047	t0002	g0049	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01884	hp2	a0001	c0003	t0002	g0004	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01928	hp1	a0002	c0002	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01928	hp2	a0004	c0006	t0001	g0003	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01934	hp1	a0007	c0011	t0002	g0019	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01934	hp2	a0001	c0001	t0001	g0003	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01943	hp1	a0003	c0004	t0001	g0002	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01943	hp2	a0002	c0002	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01952	hp1	a0004	c0006	t0001	g0003	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01952	hp2	a0002	c0002	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01975	hp2	a0002	c0002	t0001	g0062	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01978	hp1	a0003	c0009	t0001	g0002	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01978	hp2	a0001	c0003	t0002	g0004	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01981	hp1	a0002	c0002	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01993	hp1	a0002	c0002	t0001	g0031	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01993	hp2	a0003	c0009	t0001	g0002	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02004	hp1	a0002	c0002	t0001	g0002	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02004	hp2	a0004	c0006	t0001	g0003	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02015	hp1	a0018	c0019	t0004	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02015	hp2	a0001	c0001	t0001	g0003	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02027	hp1	a0002	c0002	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02027	hp2	a0002	c0002	t0001	g0035	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02040	hp1	a0002	c0002	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02055	hp1	a0008	c0012	t0001	g0026	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02055	hp2	a0032	c0046	t0001	g0029	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02056	hp1	a0002	c0002	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02056	hp2	a0001	c0005	t0002	g0010	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02071	hp1	a0001	c0005	t0002	g0006	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02071	hp2	a0019	c0017	t0001	g0005	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02074	hp1	a0002	c0002	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02074	hp2	a0031	c0032	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02080	hp1	a0002	c0002	t0001	g0007	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02083	hp1	a0024	c0053	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02083	hp2	a0002	c0002	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02129	hp1	a0001	c0005	t0002	g0010	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02132	hp1	a0019	c0017	t0001	g0004	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02132	hp2	a0005	c0008	t0001	g0012	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02135	hp1	a0002	c0002	t0001	g0005	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02135	hp2	a0002	c0002	t0001	g0005	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02148	hp1	a0002	c0002	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02148	hp2	a0002	c0002	t0001	g0001	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02155	hp1	a0001	c0005	t0002	g0006	EAS	CDX	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02155	hp2	a0002	c0002	t0001	g0001	EAS	CDX	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02165	hp1	a0005	c0008	t0001	g0002	EAS	CDX	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02257	hp1	a0001	c0001	t0001	g0015	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02257	hp2	a0001	c0003	t0002	g0006	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02258	hp1	a0041	c0051	t0002	g0030	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02258	hp2	a0001	c0005	t0002	g0009	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02273	hp1	a0004	c0006	t0001	g0003	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02273	hp2	a0003	c0004	t0001	g0002	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02280	hp1	a0001	c0003	t0002	g0050	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02280	hp2	a0001	c0003	t0002	g0004	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02300	hp1	a0001	c0003	t0002	g0004	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02300	hp2	a0001	c0001	t0001	g0007	AMR	PEL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02451	hp1	a0006	c0010	t0001	g0011	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02523	hp1	a0002	c0002	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02572	hp1	a0001	c0003	t0005	g0073	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02572	hp2	a0001	c0005	t0002	g0009	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02602	hp1	a0001	c0003	t0002	g0013	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02602	hp2	a0001	c0003	t0002	g0056	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02615	hp2	a0027	c0042	t0007	g0052	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02622	hp2	a0009	c0022	t0002	g0046	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02630	hp2	a0001	c0041	t0002	g0029	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02647	hp2	a0001	c0005	t0002	g0009	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02683	hp1	a0001	c0003	t0002	g0010	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02683	hp2	a0001	c0001	t0001	g0033	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02698	hp1	a0001	c0060	t0002	g0013	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02698	hp2	a0001	c0003	t0001	g0001	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02717	hp1	a0015	c0015	t0001	g0021	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02723	hp1	a0001	c0003	t0002	g0024	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02723	hp2	a0002	c0007	t0001	g0028	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02735	hp1	a0001	c0001	t0001	g0053	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02735	hp2	a0001	c0005	t0002	g0010	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02738	hp1	a0002	c0002	t0001	g0001	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02738	hp2	a0001	c0005	t0002	g0006	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02809	hp1	a0001	c0005	t0002	g0006	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02809	hp2	a0001	c0001	t0001	g0003	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02886	hp1	a0013	c0052	t0002	g0009	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02886	hp2	a0011	c0013	t0001	g0026	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02895	hp1	a0002	c0018	t0002	g0009	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02895	hp2	a0003	c0004	t0002	g0010	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02922	hp1	a0030	c0045	t0001	g0057	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02922	hp2	a0001	c0001	t0006	g0001	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02965	hp1	a0012	c0057	t0003	g0022	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02965	hp2	a0009	c0022	t0002	g0045	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02970	hp2	a0002	c0007	t0001	g0043	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03017	hp1	a0001	c0003	t0001	g0003	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03017	hp2	a0001	c0003	t0002	g0008	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03041	hp1	a0001	c0001	t0001	g0015	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03041	hp2	a0022	c0055	t0002	g0039	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03098	hp1	a0013	c0034	t0002	g0024	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03098	hp2	a0014	c0020	t0002	g0042	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03139	hp1	a0002	c0007	t0001	g0028	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03139	hp2	a0002	c0007	t0001	g0018	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03209	hp1	a0002	c0007	t0001	g0067	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03209	hp2	a0001	c0003	t0005	g0074	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03225	hp1	a0001	c0001	t0001	g0005	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03225	hp2	a0011	c0013	t0001	g0011	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03453	hp1	a0014	c0020	t0002	g0012	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03453	hp2	a0010	c0028	t0002	g0041	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03486	hp1	a0025	c0035	t0002	g0051	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03490	hp1	a0001	c0003	t0001	g0001	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03490	hp2	a0001	c0003	t0002	g0008	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03491	hp1	a0001	c0003	t0001	g0001	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03491	hp2	a0003	c0024	t0001	g0002	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03516	hp1	a0001	c0003	t0002	g0071	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03516	hp2	a0012	c0056	t0003	g0022	AFR	ESN	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03540	hp1	a0021	c0026	t0009	g0011	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03540	hp2	a0001	c0021	t0002	g0020	AFR	GWD	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03579	hp1	a0001	c0001	t0001	g0015	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03579	hp2	a0001	c0021	t0002	g0020	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03654	hp1	a0001	c0003	t0002	g0013	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03654	hp2	a0001	c0003	t0002	g0004	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03669	hp1	a0001	c0003	t0002	g0080	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03669	hp2	a0002	c0002	t0001	g0001	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03688	hp2	a0001	c0003	t0002	g0004	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03704	hp1	a0043	c0029	t0001	g0002	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03704	hp2	a0001	c0001	t0004	g0072	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03710	hp1	a0003	c0004	t0001	g0002	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03710	hp2	a0001	c0003	t0001	g0076	SAS	PJL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03831	hp1	a0003	c0004	t0002	g0079	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03831	hp2	a0001	c0003	t0002	g0001	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03834	hp1	a0001	c0003	t0002	g0033	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03834	hp2	a0002	c0063	t0001	g0001	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03942	hp1	a0037	c0050	t0002	g0006	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03942	hp2	a0002	c0002	t0001	g0001	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04115	hp1	a0001	c0003	t0001	g0001	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04115	hp2	a0003	c0004	t0001	g0040	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04184	hp1	a0002	c0039	t0001	g0001	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04184	hp2	a0001	c0003	t0001	g0001	SAS	BEB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04199	hp1	a0001	c0005	t0002	g0006	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04199	hp2	a0001	c0003	t0002	g0048	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04204	hp1	a0042	c0030	t0001	g0005	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG04204	hp2	a0001	c0059	t0001	g0001	SAS	STU	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18522	hp1	a0023	c0054	t0002	g0044	AFR	YRI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18522	hp2	a0002	c0007	t0001	g0018	AFR	YRI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18939	hp1	a0001	c0001	t0001	g0070	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18939	hp2	a0002	c0002	t0001	g0059	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18940	hp2	a0001	c0005	t0002	g0006	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18941	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18942	hp1	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18943	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18943	hp2	a0017	c0016	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18944	hp1	a0005	c0008	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18944	hp2	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18945	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18945	hp2	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18946	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18947	hp2	a0018	c0019	t0001	g0013	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18949	hp1	a0020	c0064	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18949	hp2	a0035	c0048	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18950	hp1	a0039	c0038	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18950	hp2	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18951	hp2	a0002	c0002	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18952	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18952	hp2	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18953	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18953	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18956	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18960	hp2	a0001	c0005	t0002	g0023	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18961	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18961	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18962	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18962	hp2	a0001	c0005	t0002	g0006	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18963	hp2	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18964	hp1	a0002	c0002	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18964	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18965	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18966	hp1	a0003	c0004	t0001	g0012	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18966	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18967	hp1	a0005	c0008	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18967	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18968	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18970	hp1	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18970	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18971	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18971	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18972	hp1	a0001	c0005	t0002	g0010	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18972	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18973	hp1	a0001	c0001	t0001	g0063	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18974	hp1	a0001	c0005	t0002	g0006	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18974	hp2	a0001	c0001	t0001	g0013	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18975	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18975	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18977	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18979	hp1	a0002	c0002	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18979	hp2	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18980	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18980	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18981	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18981	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18982	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18982	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18983	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18983	hp2	a0001	c0001	t0001	g0058	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18985	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18986	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18986	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18987	hp1	a0002	c0002	t0001	g0031	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18987	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18989	hp1	a0017	c0016	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18989	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18990	hp1	a0001	c0005	t0002	g0006	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18994	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18995	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18998	hp2	a0001	c0003	t0001	g0060	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19000	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19000	hp2	a0001	c0001	t0001	g0014	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19002	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19002	hp2	a0009	c0062	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19003	hp1	a0001	c0001	t0001	g0034	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19003	hp2	a0001	c0001	t0001	g0034	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19004	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19005	hp1	a0004	c0006	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19005	hp2	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19007	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19009	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19009	hp2	a0001	c0001	t0001	g0030	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19010	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19010	hp2	a0005	c0008	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19011	hp1	a0001	c0005	t0002	g0006	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19011	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19056	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19056	hp2	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19058	hp2	a0001	c0001	t0001	g0004	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19062	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19062	hp2	a0001	c0001	t0001	g0014	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19063	hp1	a0001	c0005	t0002	g0023	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19064	hp1	a0003	c0004	t0001	g0012	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19064	hp2	a0001	c0001	t0001	g0014	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19065	hp2	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19067	hp1	a0033	c0031	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19067	hp2	a0003	c0004	t0001	g0038	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19070	hp1	a0002	c0002	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19070	hp2	a0001	c0025	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19074	hp1	a0001	c0001	t0001	g0014	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19074	hp2	a0001	c0001	t0001	g0014	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19075	hp1	a0002	c0002	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19075	hp2	a0001	c0001	t0001	g0017	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19077	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19077	hp2	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19078	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19078	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19079	hp1	a0003	c0004	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19079	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19081	hp1	a0001	c0001	t0001	g0017	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19081	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19082	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19082	hp2	a0001	c0003	t0002	g0055	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19084	hp2	a0002	c0002	t0001	g0078	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19085	hp1	a0002	c0002	t0001	g0005	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19088	hp2	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19090	hp1	a0001	c0001	t0008	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19091	hp1	a0001	c0001	t0001	g0017	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19091	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19240	hp1	a0006	c0010	t0001	g0025	AFR	YRI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA19240	hp2	a0001	c0001	t0001	g0015	AFR	YRI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20129	hp1	a0008	c0012	t0001	g0011	AFR	ASW	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20752	hp1	a0038	c0040	t0001	g0001	EUR	TSI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20752	hp2	a0001	c0044	t0002	g0005	EUR	TSI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20805	hp1	a0007	c0011	t0002	g0077	EUR	TSI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20805	hp2	a0001	c0003	t0002	g0008	EUR	TSI	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20905	hp1	a0029	c0033	t0001	g0001	SAS	GIH	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01123	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG01123	hp2	a0001	c0003	t0002	g0001	AMR	CLM	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02109	hp1	a0001	c0061	t0002	g0069	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02109	hp2	a0001	c0003	t0002	g0002	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG02559	hp2	a0002	c0007	t0001	g0018	AFR	ACB	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03471	hp1	a0001	c0003	t0001	g0004	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG03471	hp2	a0026	c0049	t0001	g0037	AFR	MSL	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG06807	hp1	a0008	c0012	t0001	g0025	AFR	USA	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
HG06807	hp2	a0001	c0003	t0002	g0004	AFR	USA	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18955	hp1	a0002	c0002	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA18955	hp2	a0010	c0027	t0001	g0001	EAS	JPT	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA21309	hp1	a0002	c0018	t0002	g0006	AFR	LWK	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
NA21309	hp2	a0001	c0003	t0001	g0066	AFR	LWK	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
homoSapiens_chm13v2	hp1	a0001	c0003	t0002	g0032	REF	REF	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962
homoSapiens_grch38	hp1	a0006	c0010	t0001	g0011	REF	REF	SPATA31A1_chr9_39350669_39366962	SPATA31A1	chr9	39350669	39366962

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr9:39355774	C C	T T	1	a0020 a0020	1	NA18949.hp1 NA18949.hp1	missense_variant	MODERATE	c.44C>T c.44C>T	p.Ser15Leu p.Ser15Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4	106/4259	44/4044	15/1347	chr9	39355774
chr9:39357773	C C	A A	1	a0021 a0021	1	HG03540.hp1 HG03540.hp1	missense_variant	MODERATE	c.263C>A c.263C>A	p.Pro88Gln p.Pro88Gln	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/4	325/4259	263/4044	88/1347	chr9	39357773
chr9:39357773	C C	G G	38	a0001 a0002 a0003 others(35): Show a0001 a0002 a0003 a0004 a0005 a0007 a0009 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0020 a0022 a0023 a0024 a0025 a0026 a0027 a0028 a0029 a0030 a0031 a0032 a0033 a0034 a0035 a0036 a0037 a0038 a0039 a0040 a0041 a0042 a0043	412	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(409): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.263C>G c.263C>G	p.Pro88Arg p.Pro88Arg	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/4	325/4259	263/4044	88/1347	chr9	39357773
chr9:39357784	C C	G G	3	a0007 a0009 a0010 a0007 a0009 a0010	9	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(6): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 HG02622.hp2 HG02965.hp2 HG03453.hp2 NA18955.hp2 NA19002.hp2 NA20805.hp1	missense_variant	MODERATE	c.274C>G c.274C>G	p.Gln92Glu p.Gln92Glu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/4	336/4259	274/4044	92/1347	chr9	39357784
chr9:39358087	C C	A A	1	a0043 a0043	1	HG03704.hp1 HG03704.hp1	missense_variant	MODERATE	c.322C>A c.322C>A	p.His108Asn p.His108Asn	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	384/4259	322/4044	108/1347	chr9	39358087
chr9:39358165	G G	C C	1	a0042 a0042	1	HG04204.hp1 HG04204.hp1	missense_variant	MODERATE	c.400G>C c.400G>C	p.Ala134Pro p.Ala134Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	462/4259	400/4044	134/1347	chr9	39358165
chr9:39358217	C C	T T	3	a0012 a0022 a0023 a0012 a0022 a0023	4	HG02965.hp1 HG03041.hp2 HG03516.hp2 others(1): Show HG02965.hp1 HG03041.hp2 HG03516.hp2 NA18522.hp1	missense_variant	MODERATE	c.452C>T c.452C>T	p.Pro151Leu p.Pro151Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	514/4259	452/4044	151/1347	chr9	39358217
chr9:39358462	A A	G G	1	a0024 a0024	1	HG02083.hp1 HG02083.hp1	missense_variant	MODERATE	c.697A>G c.697A>G	p.Thr233Ala p.Thr233Ala	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	759/4259	697/4044	233/1347	chr9	39358462
chr9:39358495	G G	A A	1	a0019 a0019	2	HG02071.hp2 HG02132.hp1 HG02071.hp2 HG02132.hp1	missense_variant	MODERATE	c.730G>A c.730G>A	p.Ala244Thr p.Ala244Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	792/4259	730/4044	244/1347	chr9	39358495
chr9:39358639	G G	A A	1	a0023 a0023	1	NA18522.hp1 NA18522.hp1	missense_variant	MODERATE	c.874G>A c.874G>A	p.Ala292Thr p.Ala292Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	936/4259	874/4044	292/1347	chr9	39358639
chr9:39358675	C C	T T	1	a0013 a0013	2	HG02886.hp1 HG03098.hp1 HG02886.hp1 HG03098.hp1	missense_variant	MODERATE	c.910C>T c.910C>T	p.Arg304Cys p.Arg304Cys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	972/4259	910/4044	304/1347	chr9	39358675
chr9:39358747	G G	A A	1	a0025 a0025	1	HG03486.hp1 HG03486.hp1	missense_variant	MODERATE	c.982G>A c.982G>A	p.Val328Met p.Val328Met	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1044/4259	982/4044	328/1347	chr9	39358747
chr9:39358855	C C	T T	1	a0041 a0041	1	HG02258.hp1 HG02258.hp1	missense_variant	MODERATE	c.1090C>T c.1090C>T	p.Arg364Trp p.Arg364Trp	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1152/4259	1090/4044	364/1347	chr9	39358855
chr9:39358957	C C	T T	33	a0001 a0003 a0004 others(30): Show a0001 a0003 a0004 a0005 a0007 a0008 a0009 a0010 a0011 a0012 a0014 a0015 a0016 a0017 a0021 a0022 a0023 a0025 a0026 a0027 a0028 a0029 a0030 a0031 a0032 a0033 a0034 a0035 a0036 a0037 a0041 a0042 a0043	309	HG00099.hp2 HG00408.hp1 HG00408.hp2 others(306): Show HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp2 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19078.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp2 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.1192C>T c.1192C>T	p.Leu398Phe p.Leu398Phe	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1254/4259	1192/4044	398/1347	chr9	39358957
chr9:39358958	T T	G G	1	a0004 a0004	10	HG01074.hp2 HG01099.hp2 HG01192.hp2 others(7): Show HG01074.hp2 HG01099.hp2 HG01192.hp2 HG01243.hp2 HG01433.hp2 HG01928.hp2 HG01952.hp1 HG02004.hp2 HG02273.hp1 NA19005.hp1	missense_variant	MODERATE	c.1193T>G c.1193T>G	p.Leu398Arg p.Leu398Arg	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1255/4259	1193/4044	398/1347	chr9	39358958
chr9:39358976	G G	T T	1	a0004 a0004	10	HG01074.hp2 HG01099.hp2 HG01192.hp2 others(7): Show HG01074.hp2 HG01099.hp2 HG01192.hp2 HG01243.hp2 HG01433.hp2 HG01928.hp2 HG01952.hp1 HG02004.hp2 HG02273.hp1 NA19005.hp1	missense_variant	MODERATE	c.1211G>T c.1211G>T	p.Trp404Leu p.Trp404Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1273/4259	1211/4044	404/1347	chr9	39358976
chr9:39359194	C C	T T	1	a0037 a0037	1	HG03942.hp1 HG03942.hp1	missense_variant	MODERATE	c.1429C>T c.1429C>T	p.Pro477Ser p.Pro477Ser	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1491/4259	1429/4044	477/1347	chr9	39359194
chr9:39359203	C C	A A	1	a0014 a0014	2	HG03098.hp2 HG03453.hp1 HG03098.hp2 HG03453.hp1	missense_variant	MODERATE	c.1438C>A c.1438C>A	p.Gln480Lys p.Gln480Lys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1500/4259	1438/4044	480/1347	chr9	39359203
chr9:39359257	G G	A A	1	a0007 a0007	4	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(1): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 NA20805.hp1	missense_variant	MODERATE	c.1492G>A c.1492G>A	p.Glu498Lys p.Glu498Lys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1554/4259	1492/4044	498/1347	chr9	39359257
chr9:39359294	T T	C C	2	a0005 a0040 a0005 a0040	7	HG00558.hp2 HG00597.hp1 HG02132.hp2 others(4): Show HG00558.hp2 HG00597.hp1 HG02132.hp2 HG02165.hp1 NA18944.hp1 NA18967.hp1 NA19010.hp2	missense_variant	MODERATE	c.1529T>C c.1529T>C	p.Leu510Pro p.Leu510Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1591/4259	1529/4044	510/1347	chr9	39359294
chr9:39359299	C C	G G	1	a0026 a0026	1	HG03471.hp2 HG03471.hp2	missense_variant	MODERATE	c.1534C>G c.1534C>G	p.Pro512Ala p.Pro512Ala	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1596/4259	1534/4044	512/1347	chr9	39359299
chr9:39359320	A A	C C	6	a0003 a0005 a0014 others(3): Show a0003 a0005 a0014 a0035 a0036 a0040	46	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(43): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00673.hp1 HG00738.hp1 HG01099.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01943.hp1 HG01978.hp1 HG01993.hp2 HG02132.hp2 HG02165.hp1 HG02273.hp2 HG02895.hp2 HG03098.hp2 HG03453.hp1 HG03491.hp2 HG03710.hp1 HG03831.hp1 HG04115.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18949.hp2 NA18950.hp2 NA18952.hp2 NA18961.hp1 NA18962.hp1 NA18963.hp2 NA18966.hp1 NA18967.hp1 NA18975.hp1 NA18982.hp1 NA19000.hp1 NA19010.hp2 NA19062.hp1 NA19064.hp1 NA19067.hp2 NA19078.hp1 NA19079.hp1	missense_variant	MODERATE	c.1555A>C c.1555A>C	p.Lys519Gln p.Lys519Gln	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1617/4259	1555/4044	519/1347	chr9	39359320
chr9:39359352	G G	C C	1	a0011 a0011	2	HG02886.hp2 HG03225.hp2 HG02886.hp2 HG03225.hp2	missense_variant	MODERATE	c.1587G>C c.1587G>C	p.Gln529His p.Gln529His	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1649/4259	1587/4044	529/1347	chr9	39359352
chr9:39359402	C C	T T	1	a0038 a0038	1	NA20752.hp1 NA20752.hp1	missense_variant	MODERATE	c.1637C>T c.1637C>T	p.Pro546Leu p.Pro546Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1699/4259	1637/4044	546/1347	chr9	39359402
chr9:39359714	G G	A A	1	a0007 a0007	4	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(1): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 NA20805.hp1	missense_variant	MODERATE	c.1949G>A c.1949G>A	p.Gly650Asp p.Gly650Asp	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2011/4259	1949/4044	650/1347	chr9	39359714
chr9:39359731	G G	A A	1	a0039 a0039	1	NA18950.hp1 NA18950.hp1	missense_variant	MODERATE	c.1966G>A c.1966G>A	p.Ala656Thr p.Ala656Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2028/4259	1966/4044	656/1347	chr9	39359731
chr9:39360157	C C	A A	2	a0007 a0027 a0007 a0027	5	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(2): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 HG02615.hp2 NA20805.hp1	missense_variant	MODERATE	c.2392C>A c.2392C>A	p.Gln798Lys p.Gln798Lys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2454/4259	2392/4044	798/1347	chr9	39360157
chr9:39360255	G G	C C	1	a0034 a0034	1	HG01106.hp2 HG01106.hp2	missense_variant	MODERATE	c.2490G>C c.2490G>C	p.Lys830Asn p.Lys830Asn	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2552/4259	2490/4044	830/1347	chr9	39360255
chr9:39360289	C C	T T	1	a0033 a0033	1	NA19067.hp1 NA19067.hp1	missense_variant	MODERATE	c.2524C>T c.2524C>T	p.Pro842Ser p.Pro842Ser	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2586/4259	2524/4044	842/1347	chr9	39360289
chr9:39360428	C C	G G	1	a0028 a0028	1	HG01884.hp1 HG01884.hp1	missense_variant	MODERATE	c.2663C>G c.2663C>G	p.Ser888Cys p.Ser888Cys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2725/4259	2663/4044	888/1347	chr9	39360428
chr9:39360694	A A	G G	2	a0017 a0032 a0017 a0032	3	HG02055.hp2 NA18943.hp2 NA18989.hp1 HG02055.hp2 NA18943.hp2 NA18989.hp1	missense_variant	MODERATE	c.2929A>G c.2929A>G	p.Met977Val p.Met977Val	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2991/4259	2929/4044	977/1347	chr9	39360694
chr9:39360731	C C	A A	1	a0016 a0016	2	HG01168.hp2 HG01169.hp1 HG01168.hp2 HG01169.hp1	missense_variant	MODERATE	c.2966C>A c.2966C>A	p.Ser989Tyr p.Ser989Tyr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3028/4259	2966/4044	989/1347	chr9	39360731
chr9:39360853	G G	A A	1	a0036 a0036	1	HG01346.hp2 HG01346.hp2	missense_variant	MODERATE	c.3088G>A c.3088G>A	p.Ala1030Thr p.Ala1030Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3150/4259	3088/4044	1030/1347	chr9	39360853
chr9:39360884	C C	G G	1	a0029 a0029	1	NA20905.hp1 NA20905.hp1	missense_variant	MODERATE	c.3119C>G c.3119C>G	p.Ser1040Cys p.Ser1040Cys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3181/4259	3119/4044	1040/1347	chr9	39360884
chr9:39360952	G G	A A	38	a0001 a0002 a0003 others(35): Show a0001 a0002 a0003 a0004 a0005 a0007 a0009 a0010 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0020 a0022 a0023 a0024 a0025 a0026 a0027 a0028 a0029 a0031 a0032 a0033 a0034 a0035 a0036 a0037 a0038 a0039 a0040 a0041 a0042 a0043	413	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(410): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.3187G>A c.3187G>A	p.Ala1063Thr p.Ala1063Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3249/4259	3187/4044	1063/1347	chr9	39360952
chr9:39360965	G G	A A	1	a0018 a0018	2	HG02015.hp1 NA18947.hp2 HG02015.hp1 NA18947.hp2	missense_variant	MODERATE	c.3200G>A c.3200G>A	p.Arg1067Gln p.Arg1067Gln	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3262/4259	3200/4044	1067/1347	chr9	39360965
chr9:39361061	A A	G G	3	a0007 a0015 a0027 a0007 a0015 a0027	7	HG00733.hp1 HG01074.hp1 HG01243.hp1 others(4): Show HG00733.hp1 HG01074.hp1 HG01243.hp1 HG01934.hp1 HG02615.hp2 HG02717.hp1 NA20805.hp1	missense_variant	MODERATE	c.3296A>G c.3296A>G	p.Asn1099Ser p.Asn1099Ser	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3358/4259	3296/4044	1099/1347	chr9	39361061
chr9:39361207	G G	A A	1	a0014 a0014	2	HG03098.hp2 HG03453.hp1 HG03098.hp2 HG03453.hp1	missense_variant	MODERATE	c.3442G>A c.3442G>A	p.Val1148Ile p.Val1148Ile	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3504/4259	3442/4044	1148/1347	chr9	39361207
chr9:39361397	C C	T T	1	a0035 a0035	1	NA18949.hp2 NA18949.hp2	missense_variant	MODERATE	c.3632C>T c.3632C>T	p.Thr1211Met p.Thr1211Met	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3694/4259	3632/4044	1211/1347	chr9	39361397
chr9:39361413	G G	C C	1	a0031 a0031	1	HG02074.hp2 HG02074.hp2	missense_variant	MODERATE	c.3648G>C c.3648G>C	p.Met1216Ile p.Met1216Ile	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3710/4259	3648/4044	1216/1347	chr9	39361413
chr9:39361521	C C	A A	1	a0032 a0032	1	HG02055.hp2 HG02055.hp2	missense_variant	MODERATE	c.3756C>A c.3756C>A	p.His1252Gln p.His1252Gln	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3818/4259	3756/4044	1252/1347	chr9	39361521
chr9:39361627	C C	A A	2	a0012 a0023 a0012 a0023	3	HG02965.hp1 HG03516.hp2 NA18522.hp1 HG02965.hp1 HG03516.hp2 NA18522.hp1	missense_variant	MODERATE	c.3862C>A c.3862C>A	p.Gln1288Lys p.Gln1288Lys	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3924/4259	3862/4044	1288/1347	chr9	39361627
chr9:39361727	T T	C C	1	a0038 a0038	1	NA20752.hp1 NA20752.hp1	missense_variant	MODERATE	c.3962T>C c.3962T>C	p.Leu1321Pro p.Leu1321Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	4024/4259	3962/4044	1321/1347	chr9	39361727

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr9:39355790	T T	C C	2	a0001c0023 a0003c0024 a0001c0023 a0003c0024	2	HG00673.hp2 HG03491.hp2 HG00673.hp2 HG03491.hp2	synonymous_variant	LOW	c.60T>C c.60T>C	p.Ser20Ser p.Ser20Ser	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4	122/4259	60/4044	20/1347	chr9	39355790
chr9:39355823	T T	C C	1	a0001c0025 a0001c0025	1	NA19070.hp2 NA19070.hp2	synonymous_variant	LOW	c.93T>C c.93T>C	p.Thr31Thr p.Thr31Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4	155/4259	93/4044	31/1347	chr9	39355823
chr9:39355853	A A	T T	1	a0002c0063 a0002c0063	1	HG03834.hp2 HG03834.hp2	synonymous_variant	LOW	c.123A>T c.123A>T	p.Leu41Leu p.Leu41Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4	185/4259	123/4044	41/1347	chr9	39355853
chr9:39357810	A A	G G	1	a0001c0061 a0001c0061	1	HG02109.hp1 HG02109.hp1	synonymous_variant	LOW	c.300A>G c.300A>G	p.Gln100Gln p.Gln100Gln	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/4	362/4259	300/4044	100/1347	chr9	39357810
chr9:39358134	A A	G G	1	a0001c0060 a0001c0060	1	HG02698.hp1 HG02698.hp1	synonymous_variant	LOW	c.369A>G c.369A>G	p.Pro123Pro p.Pro123Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	431/4259	369/4044	123/1347	chr9	39358134
chr9:39358140	A A	G G	3	a0001c0021 a0001c0059 a0010c0028 a0001c0021 a0001c0059 a0010c0028	4	HG03453.hp2 HG03540.hp2 HG03579.hp2 others(1): Show HG03453.hp2 HG03540.hp2 HG03579.hp2 HG04204.hp2	synonymous_variant	LOW	c.375A>G c.375A>G	p.Glu125Glu p.Glu125Glu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	437/4259	375/4044	125/1347	chr9	39358140
chr9:39358146	C C	T T	1	a0001c0059 a0001c0059	1	HG04204.hp2 HG04204.hp2	synonymous_variant	LOW	c.381C>T c.381C>T	p.Gly127Gly p.Gly127Gly	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	443/4259	381/4044	127/1347	chr9	39358146
chr9:39358170	C C	T T	1	a0001c0058 a0001c0058	1	HG00621.hp1 HG00621.hp1	synonymous_variant	LOW	c.405C>T c.405C>T	p.Ser135Ser p.Ser135Ser	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	467/4259	405/4044	135/1347	chr9	39358170
chr9:39358230	G G	A A	17	a0001c0001 a0001c0023 a0001c0025 others(14): Show a0001c0001 a0001c0023 a0001c0025 a0001c0058 a0001c0059 a0002c0007 a0004c0006 a0009c0062 a0010c0027 a0013c0034 a0015c0015 a0016c0014 a0017c0016 a0029c0033 a0031c0032 a0033c0031 a0042c0030	152	HG00408.hp2 HG00544.hp1 HG00558.hp1 others(149): Show HG00408.hp2 HG00544.hp1 HG00558.hp1 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG01074.hp2 HG01099.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01433.hp2 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01975.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp2 HG02129.hp2 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02809.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp2 HG04204.hp1 HG04204.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18940.hp1 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18946.hp1 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp1 NA18968.hp2 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18977.hp1 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20905.hp1 NA20905.hp2	synonymous_variant	LOW	c.465G>A c.465G>A	p.Pro155Pro p.Pro155Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	527/4259	465/4044	155/1347	chr9	39358230
chr9:39358873	T T	C C	2	a0003c0009 a0036c0036 a0003c0009 a0036c0036	6	HG01261.hp2 HG01346.hp2 HG01358.hp1 others(3): Show HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01978.hp1 HG01993.hp2	synonymous_variant	LOW	c.1108T>C c.1108T>C	p.Leu370Leu p.Leu370Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1170/4259	1108/4044	370/1347	chr9	39358873
chr9:39359181	G G	A A	3	a0001c0005 a0001c0041 a0002c0018 a0001c0005 a0001c0041 a0002c0018	25	HG00609.hp2 HG01109.hp2 HG01175.hp2 others(22): Show HG00609.hp2 HG01109.hp2 HG01175.hp2 HG02056.hp2 HG02071.hp1 HG02129.hp1 HG02155.hp1 HG02258.hp2 HG02572.hp2 HG02630.hp2 HG02647.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02895.hp1 HG04199.hp1 NA18940.hp2 NA18960.hp2 NA18962.hp2 NA18972.hp1 NA18974.hp1 NA18990.hp1 NA19011.hp1 NA19063.hp1 NA21309.hp1	synonymous_variant	LOW	c.1416G>A c.1416G>A	p.Pro472Pro p.Pro472Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1478/4259	1416/4044	472/1347	chr9	39359181
chr9:39359337	T T	C C	1	a0022c0055 a0022c0055	1	HG03041.hp2 HG03041.hp2	synonymous_variant	LOW	c.1572T>C c.1572T>C	p.Ala524Ala p.Ala524Ala	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1634/4259	1572/4044	524/1347	chr9	39359337
chr9:39359466	C C	T T	1	a0012c0057 a0012c0057	1	HG02965.hp1 HG02965.hp1	synonymous_variant	LOW	c.1701C>T c.1701C>T	p.Asp567Asp p.Asp567Asp	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	1763/4259	1701/4044	567/1347	chr9	39359466
chr9:39360006	C C	T T	1	a0021c0026 a0021c0026	1	HG03540.hp1 HG03540.hp1	synonymous_variant	LOW	c.2241C>T c.2241C>T	p.Pro747Pro p.Pro747Pro	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2303/4259	2241/4044	747/1347	chr9	39360006
chr9:39360288	T T	G G	1	a0033c0031 a0033c0031	1	NA19067.hp1 NA19067.hp1	synonymous_variant	LOW	c.2523T>G c.2523T>G	p.Gly841Gly p.Gly841Gly	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	2585/4259	2523/4044	841/1347	chr9	39360288
chr9:39360834	C C	T T	1	a0014c0020 a0014c0020	2	HG03098.hp2 HG03453.hp1 HG03098.hp2 HG03453.hp1	synonymous_variant	LOW	c.3069C>T c.3069C>T	p.Thr1023Thr p.Thr1023Thr	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3131/4259	3069/4044	1023/1347	chr9	39360834
chr9:39360990	T T	C C	1	a0002c0039 a0002c0039	1	HG04184.hp1 HG04184.hp1	synonymous_variant	LOW	c.3225T>C c.3225T>C	p.Leu1075Leu p.Leu1075Leu	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3287/4259	3225/4044	1075/1347	chr9	39360990
chr9:39361443	G G	A A	1	a0001c0044 a0001c0044	1	NA20752.hp2 NA20752.hp2	synonymous_variant	LOW	c.3678G>A c.3678G>A	p.Ala1226Ala p.Ala1226Ala	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	3740/4259	3678/4044	1226/1347	chr9	39361443
chr9:39361749	C C	A A	1	a0001c0041 a0001c0041	1	HG02630.hp2 HG02630.hp2	synonymous_variant	LOW	c.3984C>A c.3984C>A	p.Ser1328Ser p.Ser1328Ser	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	4046/4259	3984/4044	1328/1347	chr9	39361749

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr9:39355680	C C	G G	1	a0021c0026t0009 a0021c0026t0009	1	HG03540.hp1 HG03540.hp1	5_prime_UTR_variant	MODIFIER	c.-51C>G c.-51C>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4	51	chr9	39355680
chr9:39355684	C C	T T	1	a0001c0001t0008 a0001c0001t0008	1	NA19090.hp1 NA19090.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-47C>T c.-47C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4		chr9	39355684
chr9:39355718	C C	T T	1	a0001c0003t0005 a0001c0003t0005	2	HG02572.hp1 HG03209.hp2 HG02572.hp1 HG03209.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-13C>T c.-13C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4		chr9	39355718
chr9:39355720	C C	T T	2	a0001c0001t0004 a0018c0019t0004 a0001c0001t0004 a0018c0019t0004	2	HG02015.hp1 HG03704.hp2 HG02015.hp1 HG03704.hp2	5_prime_UTR_variant	MODIFIER	c.-11C>T c.-11C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/4	11	chr9	39355720
chr9:39361879	T T	G G	1	a0001c0001t0006 a0001c0001t0006	1	HG02922.hp2 HG02922.hp2	3_prime_UTR_variant	MODIFIER	c.70T>G c.70T>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	70	chr9	39361879
chr9:39361888	A A	G G	1	a0027c0042t0007 a0027c0042t0007	1	HG02615.hp2 HG02615.hp2	3_prime_UTR_variant	MODIFIER	c.79A>G c.79A>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	79	chr9	39361888
chr9:39361915	A A	C C	2	a0012c0056t0003 a0012c0057t0003 a0012c0056t0003 a0012c0057t0003	2	HG02965.hp1 HG03516.hp2 HG02965.hp1 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.106A>C c.106A>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	106	chr9	39361915
chr9:39361933	A A	T T	26	a0001c0003t0002 a0001c0003t0005 a0001c0005t0002 others(23): Show a0001c0003t0002 a0001c0003t0005 a0001c0005t0002 a0001c0021t0002 a0001c0041t0002 a0001c0044t0002 a0001c0060t0002 a0001c0061t0002 a0002c0018t0002 a0003c0004t0002 a0007c0011t0002 a0009c0022t0002 a0010c0028t0002 a0012c0056t0003 a0012c0057t0003 a0013c0034t0002 a0013c0052t0002 a0014c0020t0002 a0022c0055t0002 a0023c0054t0002 a0025c0035t0002 a0027c0042t0007 a0028c0047t0002 a0034c0043t0002 a0037c0050t0002 a0041c0051t0002	108	HG00099.hp2 HG00408.hp1 HG00609.hp2 others(105): Show HG00099.hp2 HG00408.hp1 HG00609.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01978.hp2 HG02056.hp2 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04199.hp1 HG04199.hp2 HG06807.hp2 NA18522.hp1 NA18940.hp2 NA18960.hp2 NA18962.hp2 NA18972.hp1 NA18974.hp1 NA18990.hp1 NA19011.hp1 NA19063.hp1 NA19082.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.124A>T c.124A>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	4/4	124	chr9	39361933

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr9:39355942	C C	T T	1	a0001c0003t0002g0080 a0001c0003t0002g0080	1	HG03669.hp1 HG03669.hp1	intron_variant	MODIFIER	c.189+23C>T c.189+23C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39355942
chr9:39356083	A A	T T	1	a0003c0004t0002g0079 a0003c0004t0002g0079	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.189+164A>T c.189+164A>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356083
chr9:39356100	T T	C C	1	a0002c0002t0001g0035 a0002c0002t0001g0035	1	HG02027.hp2 HG02027.hp2	intron_variant	MODIFIER	c.189+181T>C c.189+181T>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356100
chr9:39356218	C C	T T	1	a0002c0002t0001g0078 a0002c0002t0001g0078	1	NA19084.hp2 NA19084.hp2	intron_variant	MODIFIER	c.189+299C>T c.189+299C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356218
chr9:39356298	G G	C C	28	a0001c0003t0002g0002 a0001c0021t0002g0020 a0002c0002t0001g0002 others(25): Show a0001c0003t0002g0002 a0001c0021t0002g0020 a0002c0002t0001g0002 a0002c0007t0001g0043 a0003c0004t0001g0002 a0003c0004t0001g0012 a0003c0004t0001g0036 a0003c0004t0001g0038 a0003c0004t0001g0040 a0003c0009t0001g0002 a0003c0024t0001g0002 a0005c0008t0001g0002 a0005c0008t0001g0012 a0009c0022t0002g0045 a0009c0022t0002g0046 a0010c0028t0002g0041 a0012c0056t0003g0022 a0012c0057t0003g0022 a0014c0020t0002g0012 a0014c0020t0002g0042 a0015c0015t0001g0021 a0022c0055t0002g0039 a0023c0054t0002g0044 a0026c0049t0001g0037 a0035c0048t0001g0002 a0036c0036t0001g0002 a0040c0037t0001g0002 a0043c0029t0001g0002	61	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(58): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00673.hp1 HG00738.hp1 HG01099.hp1 HG01243.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01943.hp1 HG01978.hp1 HG01993.hp2 HG02004.hp1 HG02109.hp2 HG02132.hp2 HG02165.hp1 HG02273.hp2 HG02622.hp2 HG02717.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03704.hp1 HG03710.hp1 HG04115.hp2 NA18522.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18949.hp2 NA18950.hp2 NA18952.hp2 NA18961.hp1 NA18962.hp1 NA18963.hp2 NA18966.hp1 NA18967.hp1 NA18975.hp1 NA18982.hp1 NA19000.hp1 NA19010.hp2 NA19062.hp1 NA19064.hp1 NA19067.hp2 NA19078.hp1 NA19079.hp1 NA19081.hp2	intron_variant	MODIFIER	c.189+379G>C c.189+379G>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356298
chr9:39356352	C C	T T	2	a0007c0011t0002g0019 a0007c0011t0002g0077 a0007c0011t0002g0019 a0007c0011t0002g0077	4	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(1): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 NA20805.hp1	intron_variant	MODIFIER	c.189+433C>T c.189+433C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356352
chr9:39356361	C C	T T	1	a0001c0003t0001g0076 a0001c0003t0001g0076	1	HG03710.hp2 HG03710.hp2	intron_variant	MODIFIER	c.189+442C>T c.189+442C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356361
chr9:39356449	G G	T T	2	a0009c0022t0002g0045 a0009c0022t0002g0046 a0009c0022t0002g0045 a0009c0022t0002g0046	2	HG02622.hp2 HG02965.hp2 HG02622.hp2 HG02965.hp2	intron_variant	MODIFIER	c.189+530G>T c.189+530G>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356449
chr9:39356482	C C	CTG CTG	18	a0001c0001t0001g0003 a0001c0001t0001g0033 a0001c0001t0001g0034 others(15): Show a0001c0001t0001g0003 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0004g0072 a0001c0003t0001g0003 a0001c0003t0002g0032 a0001c0003t0002g0033 a0001c0003t0002g0068 a0001c0003t0002g0071 a0001c0003t0005g0073 a0001c0003t0005g0074 a0001c0061t0002g0069 a0002c0002t0001g0003 a0004c0006t0001g0003 a0009c0022t0002g0046 a0023c0054t0002g0044	46	HG00438.hp1 HG00639.hp2 HG01074.hp2 others(43): Show HG00438.hp1 HG00639.hp2 HG01074.hp2 HG01099.hp2 HG01192.hp2 HG01243.hp2 HG01358.hp2 HG01433.hp2 HG01516.hp2 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG02004.hp2 HG02015.hp2 HG02109.hp1 HG02273.hp1 HG02572.hp1 HG02622.hp2 HG02683.hp2 HG02809.hp2 HG03017.hp1 HG03209.hp2 HG03516.hp1 HG03704.hp2 HG03834.hp1 NA18522.hp1 NA18939.hp1 NA18943.hp1 NA18951.hp2 NA18953.hp2 NA18964.hp1 NA18964.hp2 NA18971.hp1 NA18979.hp1 NA18983.hp1 NA18994.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19010.hp1 NA19011.hp2 NA19070.hp1 NA19075.hp1 NA19082.hp1 NA19091.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.189+593_189+594dup others(2): Show c.189+593_189+594dupGT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356482
chr9:39356482	CTG CTG	C C	41	a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0053 others(38): Show a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0053 a0001c0003t0002g0002 a0001c0003t0002g0006 a0001c0003t0002g0010 a0001c0003t0002g0013 a0001c0003t0002g0024 a0001c0003t0002g0048 a0001c0003t0002g0050 a0001c0005t0002g0006 a0001c0005t0002g0009 a0001c0005t0002g0010 a0001c0005t0002g0023 a0001c0060t0002g0013 a0002c0002t0001g0002 a0002c0018t0002g0006 a0002c0018t0002g0009 a0003c0004t0001g0002 a0003c0004t0001g0036 a0003c0004t0001g0038 a0003c0004t0002g0010 a0003c0004t0002g0079 a0003c0009t0001g0002 a0003c0024t0001g0002 a0005c0008t0001g0002 a0007c0011t0002g0019 a0007c0011t0002g0077 a0013c0034t0002g0024 a0013c0052t0002g0009 a0018c0019t0001g0013 a0022c0055t0002g0039 a0025c0035t0002g0051 a0026c0049t0001g0037 a0027c0042t0007g0052 a0028c0047t0002g0049 a0035c0048t0001g0002 a0036c0036t0001g0002 a0037c0050t0002g0006 a0040c0037t0001g0002 a0043c0029t0001g0002	94	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(91): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG01074.hp1 HG01099.hp1 HG01109.hp2 HG01175.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01978.hp1 HG01993.hp2 HG02004.hp1 HG02056.hp2 HG02071.hp1 HG02109.hp2 HG02129.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG03942.hp1 HG04199.hp1 HG04199.hp2 NA18940.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18947.hp2 NA18949.hp2 NA18950.hp2 NA18952.hp2 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18967.hp1 NA18972.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18982.hp1 NA18990.hp1 NA19000.hp1 NA19010.hp2 NA19011.hp1 NA19062.hp1 NA19063.hp1 NA19067.hp2 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19240.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.189+593_189+594del others(2): Show c.189+593_189+594delGT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356482
chr9:39356512	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG00621.hp2 HG00621.hp2	intron_variant	MODIFIER	c.189+593G>A c.189+593G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356512
chr9:39356514	A A	G G	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.189+595A>G c.189+595A>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356514
chr9:39356539	TTTTCATT others(3): Show TTTTCATTTTA	T T	1	a0001c0003t0001g0076 a0001c0003t0001g0076	1	HG03710.hp2 HG03710.hp2	intron_variant	MODIFIER	c.190-589_190-580del others(10): Show c.190-589_190-580delCATTTTATTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356539
chr9:39356543	CATTTT CATTTT	C C	16	a0001c0001t0001g0004 a0001c0003t0001g0004 a0001c0003t0002g0004 others(13): Show a0001c0001t0001g0004 a0001c0003t0001g0004 a0001c0003t0002g0004 a0001c0003t0002g0010 a0001c0003t0002g0032 a0001c0003t0002g0080 a0001c0005t0002g0010 a0001c0005t0002g0023 a0001c0061t0002g0069 a0003c0004t0002g0010 a0006c0010t0001g0025 a0008c0012t0001g0025 a0008c0012t0001g0026 a0011c0013t0001g0026 a0019c0017t0001g0004 a0030c0045t0001g0057	37	HG00408.hp1 HG00738.hp2 HG01070.hp1 others(34): Show HG00408.hp1 HG00738.hp2 HG01070.hp1 HG01081.hp1 HG01109.hp1 HG01192.hp1 HG01256.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01516.hp1 HG01884.hp2 HG01978.hp2 HG02055.hp1 HG02056.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02280.hp2 HG02300.hp1 HG02683.hp1 HG02735.hp2 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG03471.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG06807.hp1 HG06807.hp2 NA18960.hp2 NA18972.hp1 NA19058.hp2 NA19063.hp1 NA19240.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.190-528_190-524del others(5): Show c.190-528_190-524delATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(3): Show CATTTTATTTT	C C	23	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0015 others(20): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0033 a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0003t0002g0005 a0001c0003t0002g0006 a0001c0003t0002g0016 a0001c0003t0002g0027 a0001c0003t0002g0033 a0001c0003t0002g0054 a0001c0005t0002g0006 a0001c0044t0002g0005 a0002c0002t0001g0005 a0002c0002t0001g0059 a0002c0007t0001g0028 a0002c0018t0002g0006 a0003c0004t0002g0079 a0019c0017t0001g0005 a0034c0043t0002g0016 a0037c0050t0002g0006 a0042c0030t0001g0005	53	HG00621.hp2 HG00642.hp1 HG00642.hp2 others(50): Show HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG01069.hp1 HG01071.hp2 HG01106.hp2 HG01168.hp1 HG01175.hp2 HG01257.hp2 HG02071.hp1 HG02071.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02257.hp1 HG02257.hp2 HG02683.hp2 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG03041.hp1 HG03139.hp1 HG03225.hp1 HG03579.hp1 HG03831.hp1 HG03834.hp1 HG03942.hp1 HG04199.hp1 HG04204.hp1 NA18939.hp2 NA18940.hp2 NA18942.hp1 NA18962.hp2 NA18970.hp1 NA18974.hp1 NA18979.hp2 NA18983.hp2 NA18990.hp1 NA19000.hp2 NA19005.hp2 NA19011.hp1 NA19056.hp2 NA19062.hp2 NA19064.hp2 NA19065.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19085.hp1 NA19240.hp2 NA20752.hp2 NA21309.hp1	intron_variant	MODIFIER	c.190-533_190-524del others(10): Show c.190-533_190-524delATTTTATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(8): Show CATTTTATTTTATTTT	C C	52	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0013 others(49): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0017 a0001c0001t0001g0030 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0003t0001g0001 a0001c0003t0001g0003 a0001c0003t0001g0060 a0001c0003t0002g0001 a0001c0003t0002g0013 a0001c0003t0002g0050 a0001c0003t0002g0061 a0001c0003t0002g0071 a0001c0005t0002g0009 a0001c0023t0001g0001 a0001c0025t0001g0001 a0001c0041t0002g0029 a0001c0058t0001g0001 a0001c0059t0001g0001 a0001c0060t0002g0013 a0002c0002t0001g0001 a0002c0002t0001g0003 a0002c0002t0001g0035 a0002c0002t0001g0062 a0002c0002t0001g0078 a0002c0007t0001g0018 a0002c0018t0002g0009 a0002c0039t0001g0001 a0002c0063t0001g0001 a0003c0004t0001g0040 a0004c0006t0001g0003 a0009c0062t0001g0001 a0010c0027t0001g0001 a0013c0052t0002g0009 a0017c0016t0001g0001 a0018c0019t0001g0013 a0018c0019t0004g0001 a0020c0064t0001g0001 a0024c0053t0001g0001 a0029c0033t0001g0001 a0031c0032t0001g0001 a0032c0046t0001g0029 a0033c0031t0001g0001 a0038c0040t0001g0001 a0039c0038t0001g0001 a0041c0051t0002g0030	226	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(223): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01433.hp2 HG01496.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02738.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03139.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03516.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19065.hp1 NA19067.hp1 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.190-538_190-524del others(15): Show c.190-538_190-524delATTTTATTTTATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(13): Show CATTTTATTTTATTTTATTTT	C C	12	a0001c0003t0001g0066 a0001c0003t0002g0024 a0001c0003t0002g0065 others(9): Show a0001c0003t0001g0066 a0001c0003t0002g0024 a0001c0003t0002g0065 a0001c0021t0002g0020 a0002c0002t0001g0031 a0002c0007t0001g0067 a0009c0022t0002g0045 a0009c0022t0002g0046 a0010c0028t0002g0041 a0013c0034t0002g0024 a0023c0054t0002g0044 a0025c0035t0002g0051	14	HG00741.hp2 HG01993.hp1 HG02622.hp2 others(11): Show HG00741.hp2 HG01993.hp1 HG02622.hp2 HG02723.hp1 HG02965.hp2 HG03098.hp1 HG03209.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 NA18522.hp1 NA18987.hp1 NA21309.hp2	intron_variant	MODIFIER	c.190-543_190-524del others(20): Show c.190-543_190-524delATTTTATTTTATTTTATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(18): Show CATTTTATTTTATTTTATTTTATTTT	C C	9	a0001c0001t0001g0007 a0001c0001t0001g0053 a0001c0001t0004g0072 others(6): Show a0001c0001t0001g0007 a0001c0001t0001g0053 a0001c0001t0004g0072 a0002c0002t0001g0007 a0003c0004t0001g0036 a0007c0011t0002g0019 a0015c0015t0001g0021 a0016c0014t0001g0007 a0027c0042t0007g0052	18	HG00733.hp1 HG00738.hp1 HG01074.hp1 others(15): Show HG00733.hp1 HG00738.hp1 HG01074.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01934.hp1 HG02080.hp1 HG02300.hp2 HG02615.hp2 HG02717.hp1 HG02735.hp1 HG03704.hp2	intron_variant	MODIFIER	c.190-548_190-524del others(25): Show c.190-548_190-524delATTTTATTTTATTTTATTTTATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(23): Show CATTTTATTTTATTTTATTTTATTTTATTTT	C C	19	a0001c0001t0001g0034 a0001c0003t0002g0002 a0001c0003t0005g0073 others(16): Show a0001c0001t0001g0034 a0001c0003t0002g0002 a0001c0003t0005g0073 a0002c0002t0001g0002 a0002c0007t0001g0043 a0003c0004t0001g0002 a0003c0004t0001g0012 a0003c0009t0001g0002 a0003c0024t0001g0002 a0005c0008t0001g0002 a0005c0008t0001g0012 a0007c0011t0002g0077 a0014c0020t0002g0012 a0014c0020t0002g0042 a0026c0049t0001g0037 a0035c0048t0001g0002 a0036c0036t0001g0002 a0040c0037t0001g0002 a0043c0029t0001g0002	51	HG00423.hp1 HG00438.hp2 HG00544.hp2 others(48): Show HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00673.hp1 HG01099.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01943.hp1 HG01978.hp1 HG01993.hp2 HG02004.hp1 HG02109.hp2 HG02132.hp2 HG02165.hp1 HG02273.hp2 HG02572.hp1 HG02970.hp2 HG03098.hp2 HG03453.hp1 HG03471.hp2 HG03491.hp2 HG03704.hp1 HG03710.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18949.hp2 NA18950.hp2 NA18952.hp2 NA18961.hp1 NA18962.hp1 NA18963.hp2 NA18966.hp1 NA18967.hp1 NA18975.hp1 NA18982.hp1 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19010.hp2 NA19062.hp1 NA19064.hp1 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA20805.hp1	intron_variant	MODIFIER	c.190-553_190-524del others(30): Show c.190-553_190-524delATTTTATTTTATTTTATTTTATTTTATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(28): Show CATTTTATTTTATTTTATTTTATTTTATTTTATTTT	C C	4	a0003c0004t0001g0038 a0012c0056t0003g0022 a0012c0057t0003g0022 others(1): Show a0003c0004t0001g0038 a0012c0056t0003g0022 a0012c0057t0003g0022 a0022c0055t0002g0039	4	HG02965.hp1 HG03041.hp2 HG03516.hp2 others(1): Show HG02965.hp1 HG03041.hp2 HG03516.hp2 NA19067.hp2	intron_variant	MODIFIER	c.190-558_190-524del others(35): Show c.190-558_190-524delATTTTATTTTATTTTATTTTATTTTATTTT ATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356543	CATTTTAT others(33): Show CATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	C C	1	a0001c0003t0005g0074 a0001c0003t0005g0074	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.190-563_190-524del others(40): Show c.190-563_190-524delATTTTATTTTATTTTATTTTATTTTATTTT ATTTTATTTT	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr9	39356543
chr9:39356558	T T	C C	1	a0001c0001t0001g0014 a0001c0001t0001g0014	5	NA19000.hp2 NA19062.hp2 NA19064.hp2 others(2): Show NA19000.hp2 NA19062.hp2 NA19064.hp2 NA19074.hp1 NA19074.hp2	intron_variant	MODIFIER	c.190-574T>C c.190-574T>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356558
chr9:39356605	T T	C C	1	a0001c0003t0002g0054 a0001c0003t0002g0054	1	HG00733.hp2 HG00733.hp2	intron_variant	MODIFIER	c.190-527T>C c.190-527T>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356605
chr9:39356712	A A	C C	2	a0007c0011t0002g0019 a0007c0011t0002g0077 a0007c0011t0002g0019 a0007c0011t0002g0077	4	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(1): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 NA20805.hp1	intron_variant	MODIFIER	c.190-420A>C c.190-420A>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356712
chr9:39356854	G G	A A	1	a0027c0042t0007g0052 a0027c0042t0007g0052	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.190-278G>A c.190-278G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356854
chr9:39356855	T T	C C	2	a0009c0022t0002g0045 a0009c0022t0002g0046 a0009c0022t0002g0045 a0009c0022t0002g0046	2	HG02622.hp2 HG02965.hp2 HG02622.hp2 HG02965.hp2	intron_variant	MODIFIER	c.190-277T>C c.190-277T>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356855
chr9:39356877	C C	T T	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG01255.hp2 HG01255.hp2	intron_variant	MODIFIER	c.190-255C>T c.190-255C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356877
chr9:39356883	G G	A A	3	a0001c0001t0001g0017 a0001c0001t0001g0058 a0001c0003t0001g0060 a0001c0001t0001g0017 a0001c0001t0001g0058 a0001c0003t0001g0060	5	NA18983.hp2 NA18998.hp2 NA19075.hp2 others(2): Show NA18983.hp2 NA18998.hp2 NA19075.hp2 NA19081.hp1 NA19091.hp1	intron_variant	MODIFIER	c.190-249G>A c.190-249G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39356883
chr9:39357062	C C	G G	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA18973.hp1 NA18973.hp1	intron_variant	MODIFIER	c.190-70C>G c.190-70C>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39357062
chr9:39357094	C C	T T	1	a0001c0003t0002g0056 a0001c0003t0002g0056	1	HG02602.hp2 HG02602.hp2	intron_variant	MODIFIER	c.190-38C>T c.190-38C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39357094
chr9:39357097	G G	A A	2	a0012c0056t0003g0022 a0012c0057t0003g0022 a0012c0056t0003g0022 a0012c0057t0003g0022	2	HG02965.hp1 HG03516.hp2 HG02965.hp1 HG03516.hp2	intron_variant	MODIFIER	c.190-35G>A c.190-35G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	1/3		chr9	39357097
chr9:39357213	A A	G G	1	a0001c0003t0002g0055 a0001c0003t0002g0055	1	NA19082.hp2 NA19082.hp2	intron_variant	MODIFIER	c.247+24A>G c.247+24A>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357213
chr9:39357215	A A	G G	3	a0002c0007t0001g0043 a0009c0022t0002g0045 a0009c0022t0002g0046 a0002c0007t0001g0043 a0009c0022t0002g0045 a0009c0022t0002g0046	3	HG02622.hp2 HG02965.hp2 HG02970.hp2 HG02622.hp2 HG02965.hp2 HG02970.hp2	intron_variant	MODIFIER	c.247+26A>G c.247+26A>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357215
chr9:39357236	C C	T T	2	a0007c0011t0002g0019 a0007c0011t0002g0077 a0007c0011t0002g0019 a0007c0011t0002g0077	4	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(1): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 NA20805.hp1	intron_variant	MODIFIER	c.247+47C>T c.247+47C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357236
chr9:39357334	C C	T T	3	a0002c0007t0001g0018 a0002c0007t0001g0028 a0002c0007t0001g0067 a0002c0007t0001g0018 a0002c0007t0001g0028 a0002c0007t0001g0067	6	HG02559.hp2 HG02723.hp2 HG03139.hp1 others(3): Show HG02559.hp2 HG02723.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 NA18522.hp2	intron_variant	MODIFIER	c.247+145C>T c.247+145C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357334
chr9:39357342	A A	C C	2	a0001c0001t0001g0030 a0041c0051t0002g0030 a0001c0001t0001g0030 a0041c0051t0002g0030	2	HG02258.hp1 NA19009.hp2 HG02258.hp1 NA19009.hp2	intron_variant	MODIFIER	c.247+153A>C c.247+153A>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357342
chr9:39357433	G G	A A	1	a0001c0003t0005g0074 a0001c0003t0005g0074	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.247+244G>A c.247+244G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357433
chr9:39357448	G G	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA18939.hp1 NA18939.hp1	intron_variant	MODIFIER	c.247+259G>A c.247+259G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357448
chr9:39357464	A A	T T	110	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(107): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0003t0001g0001 a0001c0003t0001g0003 a0001c0003t0001g0004 a0001c0003t0001g0060 a0001c0003t0001g0076 a0001c0003t0002g0001 a0001c0003t0002g0002 a0001c0003t0002g0004 a0001c0003t0002g0005 a0001c0003t0002g0008 a0001c0003t0002g0010 a0001c0003t0002g0013 a0001c0003t0002g0016 a0001c0003t0002g0032 a0001c0003t0002g0033 a0001c0003t0002g0050 a0001c0003t0002g0054 a0001c0003t0002g0055 a0001c0003t0002g0056 a0001c0003t0002g0061 a0001c0003t0002g0068 a0001c0003t0005g0073 a0001c0005t0002g0010 a0001c0021t0002g0020 a0001c0023t0001g0001 a0001c0025t0001g0001 a0001c0044t0002g0005 a0001c0058t0001g0001 a0001c0059t0001g0001 a0001c0060t0002g0013 a0002c0002t0001g0001 a0002c0002t0001g0002 a0002c0002t0001g0003 a0002c0002t0001g0005 a0002c0002t0001g0007 a0002c0002t0001g0031 a0002c0002t0001g0035 a0002c0002t0001g0059 a0002c0002t0001g0062 a0002c0002t0001g0078 a0002c0007t0001g0018 a0002c0007t0001g0028 a0002c0007t0001g0043 a0002c0007t0001g0067 a0002c0039t0001g0001 a0002c0063t0001g0001 a0003c0004t0001g0002 a0003c0004t0001g0012 a0003c0004t0001g0036 a0003c0004t0001g0038 a0003c0004t0001g0040 a0003c0004t0002g0010 a0003c0004t0002g0079 a0003c0009t0001g0002 a0003c0024t0001g0002 a0004c0006t0001g0003 a0005c0008t0001g0002 a0005c0008t0001g0012 a0007c0011t0002g0019 a0007c0011t0002g0077 a0008c0012t0001g0026 a0009c0062t0001g0001 a0010c0027t0001g0001 a0010c0028t0002g0041 a0011c0013t0001g0026 a0014c0020t0002g0012 a0015c0015t0001g0021 a0016c0014t0001g0007 a0017c0016t0001g0001 a0018c0019t0001g0013 a0018c0019t0004g0001 a0019c0017t0001g0004 a0019c0017t0001g0005 a0020c0064t0001g0001 a0022c0055t0002g0039 a0024c0053t0001g0001 a0025c0035t0002g0051 a0028c0047t0002g0049 a0029c0033t0001g0001 a0031c0032t0001g0001 a0033c0031t0001g0001 a0034c0043t0002g0016 a0035c0048t0001g0002 a0036c0036t0001g0002 a0038c0040t0001g0001 a0039c0038t0001g0001 a0040c0037t0001g0002 a0041c0051t0002g0030 a0042c0030t0001g0005 a0043c0029t0001g0002	369	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(366): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.247+275A>T c.247+275A>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357464
chr9:39357494	T T	G G	3	a0012c0056t0003g0022 a0012c0057t0003g0022 a0023c0054t0002g0044 a0012c0056t0003g0022 a0012c0057t0003g0022 a0023c0054t0002g0044	3	HG02965.hp1 HG03516.hp2 NA18522.hp1 HG02965.hp1 HG03516.hp2 NA18522.hp1	intron_variant	MODIFIER	c.248-264T>G c.248-264T>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357494
chr9:39357552	G G	A A	1	a0002c0002t0001g0059 a0002c0002t0001g0059	1	NA18939.hp2 NA18939.hp2	intron_variant	MODIFIER	c.248-206G>A c.248-206G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357552
chr9:39357557	G G	A A	4	a0001c0003t0002g0016 a0001c0003t0002g0054 a0001c0003t0002g0061 others(1): Show a0001c0003t0002g0016 a0001c0003t0002g0054 a0001c0003t0002g0061 a0034c0043t0002g0016	5	HG00099.hp2 HG00733.hp2 HG01106.hp2 others(2): Show HG00099.hp2 HG00733.hp2 HG01106.hp2 HG01168.hp1 HG01257.hp2	intron_variant	MODIFIER	c.248-201G>A c.248-201G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357557
chr9:39357570	C C	T T	1	a0010c0028t0002g0041 a0010c0028t0002g0041	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.248-188C>T c.248-188C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357570
chr9:39357571	T T	G G	1	a0010c0028t0002g0041 a0010c0028t0002g0041	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.248-187T>G c.248-187T>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357571
chr9:39357589	C C	T T	3	a0001c0003t0005g0073 a0001c0003t0005g0074 a0001c0021t0002g0020 a0001c0003t0005g0073 a0001c0003t0005g0074 a0001c0021t0002g0020	4	HG02572.hp1 HG03209.hp2 HG03540.hp2 others(1): Show HG02572.hp1 HG03209.hp2 HG03540.hp2 HG03579.hp2	intron_variant	MODIFIER	c.248-169C>T c.248-169C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357589
chr9:39357602	A A	C C	4	a0001c0003t0005g0073 a0001c0003t0005g0074 a0001c0021t0002g0020 others(1): Show a0001c0003t0005g0073 a0001c0003t0005g0074 a0001c0021t0002g0020 a0010c0028t0002g0041	5	HG02572.hp1 HG03209.hp2 HG03453.hp2 others(2): Show HG02572.hp1 HG03209.hp2 HG03453.hp2 HG03540.hp2 HG03579.hp2	intron_variant	MODIFIER	c.248-156A>C c.248-156A>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357602
chr9:39357649	G G	C C	2	a0007c0011t0002g0019 a0007c0011t0002g0077 a0007c0011t0002g0019 a0007c0011t0002g0077	4	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(1): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 NA20805.hp1	intron_variant	MODIFIER	c.248-109G>C c.248-109G>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357649
chr9:39357651	C C	T T	2	a0001c0003t0001g0060 a0010c0028t0002g0041 a0001c0003t0001g0060 a0010c0028t0002g0041	2	HG03453.hp2 NA18998.hp2 HG03453.hp2 NA18998.hp2	intron_variant	MODIFIER	c.248-107C>T c.248-107C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357651
chr9:39357656	G G	A A	1	a0002c0002t0001g0062 a0002c0002t0001g0062	1	HG01975.hp2 HG01975.hp2	intron_variant	MODIFIER	c.248-102G>A c.248-102G>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357656
chr9:39357711	A A	T T	4	a0001c0003t0001g0066 a0007c0011t0002g0019 a0007c0011t0002g0077 others(1): Show a0001c0003t0001g0066 a0007c0011t0002g0019 a0007c0011t0002g0077 a0010c0028t0002g0041	6	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(3): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 HG03453.hp2 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.248-47A>T c.248-47A>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	2/3		chr9	39357711
chr9:39357844	C C	A A	2	a0009c0022t0002g0045 a0009c0022t0002g0046 a0009c0022t0002g0045 a0009c0022t0002g0046	2	HG02622.hp2 HG02965.hp2 HG02622.hp2 HG02965.hp2	intron_variant	MODIFIER	c.308+26C>A c.308+26C>A	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/3		chr9	39357844
chr9:39357920	T T	G G	3	a0001c0003t0002g0050 a0007c0011t0002g0019 a0007c0011t0002g0077 a0001c0003t0002g0050 a0007c0011t0002g0019 a0007c0011t0002g0077	5	HG00733.hp1 HG01074.hp1 HG01934.hp1 others(2): Show HG00733.hp1 HG01074.hp1 HG01934.hp1 HG02280.hp1 NA20805.hp1	intron_variant	MODIFIER	c.308+102T>G c.308+102T>G	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/3		chr9	39357920
chr9:39358006	C C	T T	1	a0022c0055t0002g0039 a0022c0055t0002g0039	1	HG03041.hp2 HG03041.hp2	intron_variant	MODIFIER	c.309-68C>T c.309-68C>T	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/3		chr9	39358006
chr9:39358057	T T	C C	139	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0058 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0004g0072 a0001c0001t0006g0001 a0001c0001t0008g0001 a0001c0003t0001g0001 a0001c0003t0001g0003 a0001c0003t0001g0004 a0001c0003t0001g0060 a0001c0003t0001g0066 a0001c0003t0001g0076 a0001c0003t0002g0001 a0001c0003t0002g0002 a0001c0003t0002g0004 a0001c0003t0002g0005 a0001c0003t0002g0006 a0001c0003t0002g0008 a0001c0003t0002g0010 a0001c0003t0002g0013 a0001c0003t0002g0016 a0001c0003t0002g0024 a0001c0003t0002g0027 a0001c0003t0002g0032 a0001c0003t0002g0033 a0001c0003t0002g0048 a0001c0003t0002g0050 a0001c0003t0002g0054 a0001c0003t0002g0055 a0001c0003t0002g0056 a0001c0003t0002g0061 a0001c0003t0002g0065 a0001c0003t0002g0068 a0001c0003t0002g0071 a0001c0003t0002g0080 a0001c0003t0005g0073 a0001c0003t0005g0074 a0001c0005t0002g0006 a0001c0005t0002g0009 a0001c0005t0002g0010 a0001c0005t0002g0023 a0001c0021t0002g0020 a0001c0023t0001g0001 a0001c0025t0001g0001 a0001c0041t0002g0029 a0001c0044t0002g0005 a0001c0058t0001g0001 a0001c0059t0001g0001 a0001c0060t0002g0013 a0001c0061t0002g0069 a0002c0002t0001g0001 a0002c0002t0001g0002 a0002c0002t0001g0003 a0002c0002t0001g0005 a0002c0002t0001g0007 a0002c0002t0001g0031 a0002c0002t0001g0035 a0002c0002t0001g0059 a0002c0002t0001g0062 a0002c0002t0001g0078 a0002c0007t0001g0018 a0002c0007t0001g0028 a0002c0007t0001g0043 a0002c0007t0001g0067 a0002c0018t0002g0006 a0002c0018t0002g0009 a0002c0039t0001g0001 a0002c0063t0001g0001 a0003c0004t0001g0002 a0003c0004t0001g0012 a0003c0004t0001g0036 a0003c0004t0001g0038 a0003c0004t0001g0040 a0003c0004t0002g0010 a0003c0004t0002g0079 a0003c0009t0001g0002 a0003c0024t0001g0002 a0004c0006t0001g0003 a0005c0008t0001g0002 a0005c0008t0001g0012 a0007c0011t0002g0019 a0007c0011t0002g0077 a0009c0022t0002g0045 a0009c0022t0002g0046 a0009c0062t0001g0001 a0010c0027t0001g0001 a0010c0028t0002g0041 a0012c0056t0003g0022 a0012c0057t0003g0022 a0013c0034t0002g0024 a0013c0052t0002g0009 a0014c0020t0002g0012 a0014c0020t0002g0042 a0015c0015t0001g0021 a0016c0014t0001g0007 a0017c0016t0001g0001 a0018c0019t0001g0013 a0018c0019t0004g0001 a0019c0017t0001g0004 a0019c0017t0001g0005 a0020c0064t0001g0001 a0022c0055t0002g0039 a0023c0054t0002g0044 a0024c0053t0001g0001 a0025c0035t0002g0051 a0026c0049t0001g0037 a0027c0042t0007g0052 a0028c0047t0002g0049 a0029c0033t0001g0001 a0030c0045t0001g0057 a0031c0032t0001g0001 a0032c0046t0001g0029 a0033c0031t0001g0001 a0034c0043t0002g0016 a0035c0048t0001g0002 a0036c0036t0001g0002 a0037c0050t0002g0006 a0038c0040t0001g0001 a0039c0038t0001g0001 a0040c0037t0001g0002 a0041c0051t0002g0030 a0042c0030t0001g0005 a0043c0029t0001g0002	414	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(411): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.309-17T>C c.309-17T>C	SPATA31A1	ENSG00000204849.10	transcript	ENST00000377647.6	protein_coding	3/3		chr9	39358057

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🧬 JoGo Online Haplotype Explorer SPATA31A1_chr9_39350669_39366962

JoGo Local Haplotype Explorer (on iGV) SPATA31A1_chr9_39350669_39366962

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 43)

CCoding Level Haplotype Info (Total: 64)

TTranscript Level Haplotype Info (Total: 9)

GGenebody Level Haplotype Info (Total: 80)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 64)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 71)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 147)

Haplotype Details by Sample (Haploid Level) (Total: 424)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 43)

CCoding Level Variants (Synonymous Mutations) (Total: 19)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 8)

GGenebody Level Haplotype Variants (Intron) (Total: 54)

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Annotation (Repeats)

Annotation (SNP Array)