Joint Open Genome and Omics Platform (JoGo)

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geneid	399473
ensemblid	ENSG00000188766.13
hgncid	31041
symbol	SPRED3
name	sprouty related EVH1 domain containing 3
refseq_nuc	NM_001394336.1
refseq_prot	NP_001381265.1
ensembl_nuc	ENST00000691638.1
ensembl_prot	ENSP00000510478.1
mane_status	MANE Select
chr	chr19
start	38388697
end	38399587
strand	+
ver	v1.2
region	chr19:38388697-38399587
region5000	chr19:38383697-38404587
regionname0	SPRED3_chr19_38388697_38399587
regionname5000	SPRED3_chr19_38383697_38404587

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	410	355	75	58	171	14	35	132	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0002	0/0	410	2	0	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0003	0/0	410	1	0	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0004	0/0	410	1	0	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0005	0/0	410	1	1	0	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1233	344	72	56	168	14	32	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0002	0/0	1233	5	2	2	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0003	0/0	1233	2	0	2	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0004	0/0	1233	2	0	0	1	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0005	0/0	1233	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0006	0/0	1233	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0007	0/0	1233	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0008	0/0	1233	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0009	0/0	1233	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0010	0/0	1233	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
c0011	0/0	1233	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	3558	192	50	43	59	12	26	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0002	0/0	3557	58	10	5	43	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0003	0/0	3558	47	1	8	32	1	5	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0004	0/0	3557	20	2	1	17	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0005	0/0	3556	11	0	0	11	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0006	0/0	3558	3	0	0	3	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0007	0/0	3571	3	1	1	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0008	0/0	3586	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0009	0/0	3572	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0010	0/0	3558	2	0	0	0	0	2	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0011	0/0	3558	2	0	0	1	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0012	0/0	3556	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0013	0/0	3585	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0014	0/0	3559	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0015	0/0	3558	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0016	0/0	3558	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0017	0/0	3558	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0018	0/0	3561	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0019	0/0	3557	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0020	0/0	3558	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0021	0/0	3558	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0022	0/0	3558	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0023	0/0	3571	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0024	0/0	3575	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0025	0/0	3581	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0026	0/0	3580	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0027	0/0	3592	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
t0028	0/0	3586	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	66	16	13	24	6	6	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0002	0/0	44	11	13	11	2	7	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0003	0/0	19	0	3	13	0	3	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0004	0/0	17	1	3	13	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0005	0/0	14	3	0	11	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0006	0/1	13	1	4	2	2	3	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0007	0/0	13	0	0	10	0	3	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0008	0/0	13	0	0	13	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0009	0/0	10	1	2	5	0	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0010	0/0	7	0	0	7	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0011	0/0	6	0	1	5	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0012	0/0	5	2	3	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0013	0/0	5	1	1	2	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0014	0/0	5	3	1	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0015	0/0	4	2	0	1	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0016	0/0	4	0	0	4	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0017	0/0	4	0	0	4	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0018	0/0	3	1	1	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0019	0/0	3	0	0	2	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0020	0/0	3	1	0	0	0	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0021	0/0	3	0	0	3	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0022	0/0	3	1	1	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0023	0/0	3	0	1	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0024	0/0	3	3	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0025	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0026	0/0	2	0	1	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0027	0/0	2	1	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0028	0/0	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0029	0/0	2	0	1	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0030	0/0	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0031	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0032	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0033	0/0	2	0	2	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0034	0/0	2	1	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0035	0/0	2	1	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0036	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0037	0/0	2	0	0	0	0	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0038	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0039	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0040	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0041	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0042	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0043	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0044	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0045	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0046	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0047	0/0	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0048	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0049	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0050	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0051	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0052	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0053	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0054	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0055	0/0	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0056	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0057	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0058	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0059	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0060	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0061	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0062	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0063	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0064	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0065	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0066	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0067	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0068	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0069	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0070	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0071	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0072	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0073	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0074	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0075	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0076	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0077	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0078	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0079	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0080	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0081	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0082	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0083	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0084	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0085	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0086	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0087	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0088	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0089	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0090	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0091	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0092	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0093	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0094	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0095	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0096	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0097	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0098	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0099	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
g0100	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1233	344	72	56	168	14	32	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0002	0/0	1233	5	2	2	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0004	0/0	1233	2	0	0	1	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0007	0/0	1233	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0008	0/0	1233	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0010	0/0	1233	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0011	0/0	1233	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0002c0003	0/0	1233	2	0	2	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0003c0005	0/0	1233	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0004c0006	0/0	1233	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0005c0009	0/0	1233	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	4790	187	48	41	59	12	25	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0002	0/0	4789	58	10	5	43	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0003	0/0	4790	43	1	8	29	1	4	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0004	0/0	4789	20	2	1	17	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0005	0/0	4788	11	0	0	11	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0006	0/0	4790	3	0	0	3	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0008	0/0	4818	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0009	0/0	4804	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0010	0/0	4790	2	0	0	0	0	2	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0012	0/0	4788	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0013	0/0	4817	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0014	0/0	4791	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0015	0/0	4790	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0016	0/0	4790	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0017	0/0	4790	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0018	0/0	4793	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0019	0/0	4789	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0020	0/0	4790	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0021	0/0	4790	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0022	0/0	4790	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0025	0/0	4813	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0026	0/0	4812	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0027	0/0	4824	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0001t0028	0/0	4818	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0002t0007	0/0	4803	3	1	1	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0002t0023	0/0	4803	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0002t0024	0/0	4807	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0004t0011	0/0	4790	2	0	0	1	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0007t0001	0/0	4790	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0008t0003	0/0	4790	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0010t0001	0/0	4790	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0001c0011t0003	0/0	4790	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0002c0003t0001	0/0	4790	2	0	2	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0003c0005t0003	0/0	4790	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0004c0006t0003	0/0	4790	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587
a0005c0009t0001	0/0	4790	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	copy fasta	chr19	38383697	38404587

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	62	15	11	23	6	6	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0002	0/0	41	10	13	10	1	7	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0006	0/1	8	0	3	0	2	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0007	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0009	0/0	10	1	2	5	0	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0011	0/0	6	0	1	5	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0012	0/0	5	2	3	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0014	0/0	5	3	1	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0018	0/0	3	1	1	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0019	0/0	3	0	0	2	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0020	0/0	3	1	0	0	0	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0021	0/0	3	0	0	3	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0027	0/0	2	1	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0030	0/0	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0034	0/0	2	1	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0035	0/0	2	1	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0037	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0039	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0041	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0042	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0043	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0047	0/0	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0049	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0052	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0055	0/0	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0056	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0057	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0058	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0059	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0060	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0061	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0062	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0065	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0070	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0082	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0083	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0094	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0001g0099	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0004	0/0	16	1	3	12	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0005	0/0	13	3	0	10	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0008	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0016	0/0	4	0	0	4	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0017	0/0	4	0	0	4	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0022	0/0	3	1	1	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0024	0/0	3	3	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0038	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0071	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0078	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0079	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0080	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0084	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0085	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0086	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0087	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0088	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0089	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0090	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0002g0096	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0003	0/0	17	0	3	12	0	2	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0007	0/0	11	0	0	10	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0013	0/0	2	1	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0015	0/0	2	0	0	1	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0026	0/0	2	0	1	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0029	0/0	2	0	1	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0045	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0046	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0048	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0050	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0054	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0068	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0003g0069	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0004g0008	0/0	12	0	0	12	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0004g0023	0/0	3	0	1	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0004g0036	0/0	2	2	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0004g0091	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0004g0092	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0004g0093	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0005g0010	0/0	7	0	0	7	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0005g0053	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0005g0066	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0005g0067	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0005g0081	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0006g0002	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0006g0006	0/0	2	0	0	2	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0008g0031	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0008g0032	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0009g0031	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0009g0075	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0010g0003	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0010g0013	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0012g0044	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0012g0072	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0013g0032	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0014g0013	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0015g0037	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0016g0006	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0017g0002	0/0	1	0	0	0	1	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0018g0005	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0019g0004	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0020g0001	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0021g0095	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0022g0001	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0025g0025	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0026g0025	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0027g0073	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0001t0028g0074	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0002t0007g0033	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0002t0007g0063	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0002t0007g0064	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0002t0023g0077	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0002t0024g0033	0/0	1	0	1	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0004t0011g0097	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0004t0011g0098	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0007t0001g0006	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0008t0003g0003	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0010t0001g0006	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0001c0011t0003g0100	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0002c0003t0001g0001	0/0	2	0	2	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0003c0005t0003g0013	0/0	1	0	0	1	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0004c0006t0003g0007	0/0	1	0	0	0	0	1	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
a0005c0009t0001g0002	0/0	1	1	0	0	0	0	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0055	EUR	GBR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00099	hp2	a0001	c0001	t0003	g0015	EUR	GBR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00140	hp2	a0001	c0001	t0001	g0018	EUR	GBR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00280	hp2	a0001	c0001	t0017	g0002	EUR	FIN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00323	hp1	a0001	c0001	t0001	g0006	EUR	FIN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00408	hp1	a0001	c0001	t0006	g0006	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00438	hp1	a0001	c0001	t0002	g0004	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00438	hp2	a0001	c0001	t0004	g0093	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00544	hp1	a0001	c0001	t0002	g0087	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00558	hp1	a0001	c0001	t0001	g0070	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00558	hp2	a0001	c0001	t0003	g0007	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00597	hp1	a0001	c0001	t0003	g0003	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00597	hp2	a0001	c0001	t0001	g0011	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00609	hp1	a0001	c0001	t0002	g0005	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00609	hp2	a0001	c0001	t0001	g0011	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00621	hp1	a0001	c0001	t0003	g0003	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00621	hp2	a0001	c0001	t0001	g0083	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00639	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00639	hp2	a0001	c0001	t0001	g0043	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00673	hp1	a0001	c0001	t0003	g0045	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00673	hp2	a0001	c0001	t0005	g0010	EAS	CHS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00733	hp1	a0001	c0002	t0007	g0033	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00735	hp1	a0001	c0001	t0003	g0046	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00735	hp2	a0001	c0001	t0001	g0027	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01070	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01070	hp2	a0001	c0001	t0004	g0023	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01071	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01081	hp1	a0001	c0001	t0003	g0029	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01099	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01099	hp2	a0001	c0001	t0001	g0061	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01106	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01106	hp2	a0001	c0002	t0024	g0033	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01109	hp1	a0001	c0001	t0001	g0012	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01109	hp2	a0001	c0001	t0001	g0012	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01192	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01192	hp2	a0001	c0001	t0002	g0089	AMR	PUR	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01257	hp2	a0002	c0003	t0001	g0001	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01258	hp2	a0002	c0003	t0001	g0001	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01261	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01346	hp1	a0001	c0001	t0002	g0022	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01346	hp2	a0001	c0001	t0003	g0003	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01361	hp1	a0001	c0001	t0003	g0026	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01361	hp2	a0001	c0001	t0001	g0011	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01433	hp1	a0001	c0001	t0016	g0006	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01433	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01884	hp1	a0001	c0001	t0001	g0040	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01884	hp2	a0005	c0009	t0001	g0002	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01891	hp2	a0001	c0001	t0026	g0025	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01928	hp2	a0001	c0001	t0001	g0009	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01934	hp1	a0001	c0001	t0002	g0004	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01934	hp2	a0001	c0001	t0001	g0012	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01943	hp2	a0001	c0001	t0001	g0014	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01952	hp2	a0001	c0001	t0003	g0050	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01978	hp1	a0001	c0001	t0003	g0003	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01981	hp1	a0001	c0001	t0001	g0009	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01981	hp2	a0001	c0001	t0001	g0035	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02015	hp1	a0001	c0001	t0002	g0005	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02015	hp2	a0003	c0005	t0003	g0013	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02027	hp1	a0001	c0001	t0001	g0002	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02027	hp2	a0001	c0001	t0004	g0091	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02040	hp1	a0001	c0001	t0001	g0002	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02040	hp2	a0001	c0001	t0003	g0007	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02055	hp1	a0001	c0001	t0027	g0073	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02055	hp2	a0001	c0001	t0001	g0002	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02056	hp2	a0001	c0001	t0001	g0009	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02071	hp1	a0001	c0001	t0004	g0008	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02080	hp1	a0001	c0001	t0005	g0053	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02080	hp2	a0001	c0001	t0001	g0009	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02083	hp1	a0001	c0001	t0002	g0008	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02083	hp2	a0001	c0001	t0020	g0001	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02129	hp2	a0001	c0001	t0003	g0003	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02132	hp2	a0001	c0001	t0004	g0008	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02135	hp1	a0001	c0001	t0002	g0016	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02135	hp2	a0001	c0001	t0002	g0022	EAS	KHV	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02145	hp1	a0001	c0001	t0001	g0012	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02145	hp2	a0001	c0001	t0001	g0012	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02148	hp1	a0001	c0001	t0001	g0052	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02155	hp1	a0001	c0001	t0003	g0003	EAS	CDX	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02257	hp1	a0001	c0001	t0002	g0038	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02257	hp2	a0001	c0001	t0001	g0056	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02258	hp1	a0001	c0001	t0008	g0031	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02258	hp2	a0001	c0001	t0002	g0024	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02273	hp1	a0001	c0001	t0003	g0013	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02273	hp2	a0001	c0001	t0001	g0039	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02293	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02293	hp2	a0001	c0001	t0003	g0003	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02300	hp1	a0001	c0001	t0001	g0018	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02300	hp2	a0001	c0001	t0002	g0004	AMR	PEL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02451	hp2	a0001	c0001	t0001	g0020	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02602	hp1	a0001	c0001	t0010	g0013	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02602	hp2	a0001	c0001	t0001	g0019	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02615	hp1	a0001	c0001	t0004	g0036	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02615	hp2	a0001	c0001	t0002	g0004	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02622	hp2	a0001	c0001	t0002	g0024	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02630	hp1	a0001	c0001	t0001	g0002	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02630	hp2	a0001	c0001	t0028	g0074	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02647	hp1	a0001	c0001	t0002	g0022	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02647	hp2	a0001	c0001	t0001	g0002	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02683	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02683	hp2	a0001	c0001	t0001	g0009	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02717	hp1	a0001	c0001	t0022	g0001	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02723	hp1	a0001	c0001	t0004	g0036	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02723	hp2	a0001	c0001	t0001	g0042	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02738	hp1	a0001	c0001	t0010	g0003	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02738	hp2	a0001	c0001	t0001	g0009	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02809	hp1	a0001	c0001	t0001	g0002	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02809	hp2	a0001	c0001	t0001	g0002	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02895	hp1	a0001	c0001	t0001	g0041	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02896	hp1	a0001	c0001	t0001	g0035	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02896	hp2	a0001	c0001	t0002	g0024	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02897	hp1	a0001	c0001	t0001	g0014	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02897	hp2	a0001	c0001	t0001	g0014	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02965	hp1	a0001	c0001	t0001	g0082	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02965	hp2	a0001	c0001	t0001	g0057	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03017	hp1	a0001	c0001	t0003	g0003	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03041	hp1	a0001	c0001	t0001	g0014	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03041	hp2	a0001	c0001	t0001	g0034	AFR	GWD	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03098	hp1	a0001	c0001	t0001	g0051	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03098	hp2	a0001	c0001	t0025	g0025	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03130	hp2	a0001	c0001	t0009	g0075	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03139	hp1	a0001	c0001	t0008	g0032	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03139	hp2	a0001	c0001	t0001	g0059	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03225	hp1	a0001	c0001	t0002	g0005	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03225	hp2	a0001	c0001	t0001	g0001	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03239	hp1	a0001	c0001	t0001	g0002	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03239	hp2	a0001	c0001	t0003	g0007	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03453	hp1	a0001	c0001	t0001	g0015	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03453	hp2	a0001	c0001	t0002	g0038	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03490	hp1	a0001	c0001	t0001	g0020	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03516	hp1	a0001	c0001	t0009	g0031	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03516	hp2	a0001	c0001	t0001	g0002	AFR	ESN	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03654	hp1	a0001	c0002	t0007	g0064	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03704	hp1	a0001	c0001	t0001	g0062	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03704	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03710	hp1	a0004	c0006	t0003	g0007	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03710	hp2	a0001	c0001	t0001	g0002	SAS	PJL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03831	hp1	a0001	c0001	t0001	g0049	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03831	hp2	a0001	c0001	t0003	g0003	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03927	hp1	a0001	c0001	t0001	g0002	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03927	hp2	a0001	c0001	t0015	g0037	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03942	hp1	a0001	c0001	t0001	g0058	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03942	hp2	a0001	c0004	t0011	g0098	SAS	BEB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG04199	hp1	a0001	c0001	t0001	g0006	SAS	STU	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG04199	hp2	a0001	c0001	t0003	g0026	SAS	STU	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG04204	hp1	a0001	c0010	t0001	g0006	SAS	STU	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG04204	hp2	a0001	c0001	t0001	g0006	SAS	STU	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG04228	hp1	a0001	c0001	t0001	g0037	SAS	STU	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG04228	hp2	a0001	c0001	t0001	g0002	SAS	STU	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18522	hp2	a0001	c0001	t0001	g0009	AFR	YRI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18747	hp1	a0001	c0001	t0002	g0080	EAS	CHB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18906	hp2	a0001	c0007	t0001	g0006	AFR	YRI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18939	hp1	a0001	c0001	t0012	g0044	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18939	hp2	a0001	c0001	t0004	g0092	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18940	hp1	a0001	c0001	t0001	g0021	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18940	hp2	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18941	hp1	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18941	hp2	a0001	c0001	t0001	g0030	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18943	hp2	a0001	c0001	t0002	g0086	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18945	hp1	a0001	c0001	t0002	g0016	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18945	hp2	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18950	hp1	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18950	hp2	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18951	hp1	a0001	c0001	t0002	g0071	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18951	hp2	a0001	c0001	t0012	g0072	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18953	hp1	a0001	c0001	t0001	g0019	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18953	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18954	hp1	a0001	c0001	t0004	g0023	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18954	hp2	a0001	c0001	t0004	g0023	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18956	hp1	a0001	c0001	t0002	g0088	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18956	hp2	a0001	c0001	t0001	g0028	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18957	hp1	a0001	c0001	t0001	g0060	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18957	hp2	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18960	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18960	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18962	hp1	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18963	hp1	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18963	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18966	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18966	hp2	a0001	c0008	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18967	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18967	hp2	a0001	c0001	t0003	g0029	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18968	hp1	a0001	c0001	t0001	g0019	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18968	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18969	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18971	hp1	a0001	c0001	t0001	g0021	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18971	hp2	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18973	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18973	hp2	a0001	c0001	t0005	g0010	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18974	hp1	a0001	c0001	t0005	g0010	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18974	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18975	hp1	a0001	c0001	t0002	g0017	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18975	hp2	a0001	c0001	t0001	g0028	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18977	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18977	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18979	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18980	hp1	a0001	c0001	t0005	g0081	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18980	hp2	a0001	c0001	t0001	g0011	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18981	hp1	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18981	hp2	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18982	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18982	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18983	hp1	a0001	c0001	t0005	g0010	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18983	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18985	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18985	hp2	a0001	c0001	t0002	g0079	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18986	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18989	hp1	a0001	c0001	t0001	g0014	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18989	hp2	a0001	c0001	t0002	g0078	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18990	hp1	a0001	c0001	t0001	g0009	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18990	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18991	hp1	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18991	hp2	a0001	c0001	t0006	g0006	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18995	hp1	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18997	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18997	hp2	a0001	c0001	t0002	g0017	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18998	hp1	a0001	c0001	t0001	g0076	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18998	hp2	a0001	c0001	t0003	g0068	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18999	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18999	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19000	hp1	a0001	c0001	t0002	g0084	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19000	hp2	a0001	c0001	t0001	g0011	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19002	hp1	a0001	c0001	t0002	g0096	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19002	hp2	a0001	c0001	t0003	g0015	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19004	hp1	a0001	c0001	t0002	g0017	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19007	hp1	a0001	c0001	t0002	g0017	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19007	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19009	hp1	a0001	c0001	t0003	g0054	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19009	hp2	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19010	hp1	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19010	hp2	a0001	c0001	t0014	g0013	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19011	hp1	a0001	c0001	t0005	g0067	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19012	hp1	a0001	c0001	t0002	g0016	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19012	hp2	a0001	c0001	t0005	g0010	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19030	hp1	a0001	c0001	t0002	g0005	AFR	LWK	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19043	hp1	a0001	c0001	t0002	g0005	AFR	LWK	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19043	hp2	a0001	c0001	t0013	g0032	AFR	LWK	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19056	hp1	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19056	hp2	a0001	c0001	t0002	g0016	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19057	hp1	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19057	hp2	a0001	c0001	t0001	g0094	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19060	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19060	hp2	a0001	c0001	t0005	g0066	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19063	hp1	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19063	hp2	a0001	c0001	t0019	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19064	hp1	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19065	hp1	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19065	hp2	a0001	c0001	t0004	g0008	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19066	hp1	a0001	c0001	t0001	g0021	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19067	hp1	a0001	c0001	t0002	g0085	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19067	hp2	a0001	c0004	t0011	g0097	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19070	hp1	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19070	hp2	a0001	c0001	t0018	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19075	hp1	a0001	c0001	t0001	g0030	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19075	hp2	a0001	c0011	t0003	g0100	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19077	hp1	a0001	c0001	t0005	g0010	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19077	hp2	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19080	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19083	hp1	a0001	c0001	t0001	g0034	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19083	hp2	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19085	hp1	a0001	c0001	t0002	g0005	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19086	hp1	a0001	c0001	t0003	g0069	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19086	hp2	a0001	c0001	t0002	g0090	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19087	hp1	a0001	c0001	t0003	g0048	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19087	hp2	a0001	c0001	t0006	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19088	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19089	hp1	a0001	c0001	t0003	g0007	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19090	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19091	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19091	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19240	hp1	a0001	c0001	t0001	g0099	AFR	YRI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20129	hp1	a0001	c0001	t0001	g0018	AFR	ASW	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20752	hp1	a0001	c0001	t0001	g0006	EUR	TSI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20752	hp2	a0001	c0001	t0001	g0047	EUR	TSI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20805	hp2	a0001	c0001	t0001	g0002	EUR	TSI	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20905	hp1	a0001	c0001	t0001	g0007	SAS	GIH	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20905	hp2	a0001	c0001	t0001	g0020	SAS	GIH	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01123	hp1	a0001	c0001	t0002	g0004	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG01123	hp2	a0001	c0001	t0001	g0006	AMR	CLM	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02109	hp1	a0001	c0002	t0023	g0077	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02486	hp1	a0001	c0001	t0001	g0027	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG02486	hp2	a0001	c0001	t0001	g0065	AFR	ACB	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03471	hp1	a0001	c0001	t0001	g0015	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG03471	hp2	a0001	c0001	t0021	g0095	AFR	MSL	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG06807	hp1	a0001	c0001	t0001	g0002	AFR	USA	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
HG06807	hp2	a0001	c0001	t0001	g0002	AFR	USA	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18955	hp1	a0001	c0001	t0005	g0010	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA18955	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA20300	hp2	a0001	c0002	t0007	g0063	AFR	USA	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA21309	hp1	a0001	c0001	t0003	g0013	AFR	LWK	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
NA21309	hp2	a0001	c0001	t0001	g0002	AFR	LWK	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0006	REF	REF	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	SPRED3_chr19_38383697_38404587	SPRED3	chr19	38383697	38404587

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr19:38390424	G G	C C	1	a0003 a0003	1	HG02015.hp2 HG02015.hp2	missense_variant	MODERATE	c.122G>C c.122G>C	p.Gly41Ala p.Gly41Ala	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/6	237/4790	122/1233	41/410	chr19	38390424
chr19:38392112	G G	A A	1	a0004 a0004	1	HG03710.hp1 HG03710.hp1	missense_variant&splice_region_variant	MODERATE	c.344G>A c.344G>A	p.Arg115Gln p.Arg115Gln	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	3/6	459/4790	344/1233	115/410	chr19	38392112
chr19:38394659	A A	G G	1	a0005 a0005	1	HG01884.hp2 HG01884.hp2	missense_variant	MODERATE	c.440A>G c.440A>G	p.Asp147Gly p.Asp147Gly	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/6	555/4790	440/1233	147/410	chr19	38394659
chr19:38394661	T T	G G	1	a0005 a0005	1	HG01884.hp2 HG01884.hp2	missense_variant	MODERATE	c.442T>G c.442T>G	p.Ser148Ala p.Ser148Ala	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/6	557/4790	442/1233	148/410	chr19	38394661
chr19:38394662	C C	A A	1	a0005 a0005	1	HG01884.hp2 HG01884.hp2	missense_variant	MODERATE	c.443C>A c.443C>A	p.Ser148Tyr p.Ser148Tyr	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/6	558/4790	443/1233	148/410	chr19	38394662
chr19:38394757	C C	A A	1	a0002 a0002	2	HG01257.hp2 HG01258.hp2 HG01257.hp2 HG01258.hp2	missense_variant	MODERATE	c.538C>A c.538C>A	p.Pro180Thr p.Pro180Thr	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/6	653/4790	538/1233	180/410	chr19	38394757

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr19:38390371	C C	G G	1	a0001c0011 a0001c0011	1	NA19075.hp2 NA19075.hp2	synonymous_variant	LOW	c.69C>G c.69C>G	p.Gly23Gly p.Gly23Gly	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/6	184/4790	69/1233	23/410	chr19	38390371
chr19:38390455	C C	T T	1	a0001c0010 a0001c0010	1	HG04204.hp1 HG04204.hp1	synonymous_variant	LOW	c.153C>T c.153C>T	p.His51His p.His51His	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/6	268/4790	153/1233	51/410	chr19	38390455
chr19:38394762	C C	G G	1	a0001c0004 a0001c0004	2	HG03942.hp2 NA19067.hp2 HG03942.hp2 NA19067.hp2	synonymous_variant	LOW	c.543C>G c.543C>G	p.Pro181Pro p.Pro181Pro	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/6	658/4790	543/1233	181/410	chr19	38394762
chr19:38395587	C C	T T	1	a0001c0008 a0001c0008	1	NA18966.hp2 NA18966.hp2	synonymous_variant	LOW	c.675C>T c.675C>T	p.Arg225Arg p.Arg225Arg	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	790/4790	675/1233	225/410	chr19	38395587
chr19:38395671	T T	G G	1	a0001c0002 a0001c0002	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	synonymous_variant	LOW	c.759T>G c.759T>G	p.Gly253Gly p.Gly253Gly	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	874/4790	759/1233	253/410	chr19	38395671
chr19:38396055	C C	T T	1	a0001c0007 a0001c0007	1	NA18906.hp2 NA18906.hp2	synonymous_variant	LOW	c.1143C>T c.1143C>T	p.Cys381Cys p.Cys381Cys	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1258/4790	1143/1233	381/410	chr19	38396055
chr19:38396073	C C	T T	1	a0001c0002 a0001c0002	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	synonymous_variant	LOW	c.1161C>T c.1161C>T	p.Arg387Arg p.Arg387Arg	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1276/4790	1161/1233	387/410	chr19	38396073
chr19:38396118	G G	T T	1	a0001c0002 a0001c0002	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	synonymous_variant	LOW	c.1206G>T c.1206G>T	p.Gly402Gly p.Gly402Gly	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1321/4790	1206/1233	402/410	chr19	38396118

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr19:38396430	T T	C C	3	a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0001t0008 a0001c0001t0009 a0001c0001t0013	5	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.285T>C c.285T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	285		chr19	38396430
chr19:38396502	A A	C C	13	a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 others(10): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0002t0007 a0001c0002t0023 a0001c0002t0024	47	HG00438.hp2 HG00673.hp2 HG00733.hp1 others(44): Show HG00438.hp2 HG00673.hp2 HG00733.hp1 HG01070.hp2 HG01106.hp2 HG01891.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02080.hp1 HG02109.hp1 HG02132.hp2 HG02258.hp1 HG02615.hp1 HG02630.hp2 HG02723.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03516.hp1 HG03654.hp1 NA18939.hp1 NA18939.hp2 NA18950.hp2 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18963.hp1 NA18971.hp2 NA18973.hp2 NA18974.hp1 NA18980.hp1 NA18981.hp1 NA18983.hp1 NA18995.hp1 NA19010.hp1 NA19011.hp1 NA19012.hp2 NA19043.hp2 NA19057.hp1 NA19060.hp2 NA19064.hp1 NA19065.hp2 NA19077.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.357A>C c.357A>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	357		chr19	38396502
chr19:38396542	C C	T T	2	a0001c0001t0027 a0001c0001t0028 a0001c0001t0027 a0001c0001t0028	2	HG02055.hp1 HG02630.hp2 HG02055.hp1 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.397C>T c.397C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	397		chr19	38396542
chr19:38396654	C C	T T	2	a0001c0001t0027 a0001c0001t0028 a0001c0001t0027 a0001c0001t0028	2	HG02055.hp1 HG02630.hp2 HG02055.hp1 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.509C>T c.509C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	509		chr19	38396654
chr19:38396661	C C	T T	2	a0001c0001t0025 a0001c0001t0026 a0001c0001t0025 a0001c0001t0026	2	HG01891.hp2 HG03098.hp2 HG01891.hp2 HG03098.hp2	3_prime_UTR_variant	MODIFIER	c.516C>T c.516C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	516		chr19	38396661
chr19:38396663	G G	A A	1	a0001c0001t0010 a0001c0001t0010	2	HG02602.hp1 HG02738.hp1 HG02602.hp1 HG02738.hp1	3_prime_UTR_variant	MODIFIER	c.518G>A c.518G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	518		chr19	38396663
chr19:38396809	C C	A A	1	a0001c0001t0006 a0001c0001t0006	3	HG00408.hp1 NA18991.hp2 NA19087.hp2 HG00408.hp1 NA18991.hp2 NA19087.hp2	3_prime_UTR_variant	MODIFIER	c.664C>A c.664C>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	664		chr19	38396809
chr19:38396823	C C	T T	3	a0001c0002t0007 a0001c0002t0023 a0001c0002t0024 a0001c0002t0007 a0001c0002t0023 a0001c0002t0024	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.678C>T c.678C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	678		chr19	38396823
chr19:38396906	C C	T T	1	a0001c0001t0022 a0001c0001t0022	1	HG02717.hp1 HG02717.hp1	3_prime_UTR_variant	MODIFIER	c.761C>T c.761C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	761		chr19	38396906
chr19:38397085	G G	A A	1	a0001c0004t0011 a0001c0004t0011	2	HG03942.hp2 NA19067.hp2 HG03942.hp2 NA19067.hp2	3_prime_UTR_variant	MODIFIER	c.940G>A c.940G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	940		chr19	38397085
chr19:38397174	C C	G G	1	a0001c0001t0021 a0001c0001t0021	1	HG03471.hp2 HG03471.hp2	3_prime_UTR_variant	MODIFIER	c.1029C>G c.1029C>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1029		chr19	38397174
chr19:38397261	C C	G G	1	a0001c0001t0020 a0001c0001t0020	1	HG02083.hp2 HG02083.hp2	3_prime_UTR_variant	MODIFIER	c.1116C>G c.1116C>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1116		chr19	38397261
chr19:38397298	G G	T T	3	a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0001t0008 a0001c0001t0009 a0001c0001t0013	5	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.1153G>T c.1153G>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1153		chr19	38397298
chr19:38397372	A A	G G	2	a0001c0002t0007 a0001c0002t0024 a0001c0002t0007 a0001c0002t0024	4	HG00733.hp1 HG01106.hp2 HG03654.hp1 others(1): Show HG00733.hp1 HG01106.hp2 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1227A>G c.1227A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1227		chr19	38397372
chr19:38397504	G G	T T	2	a0001c0002t0007 a0001c0002t0024 a0001c0002t0007 a0001c0002t0024	4	HG00733.hp1 HG01106.hp2 HG03654.hp1 others(1): Show HG00733.hp1 HG01106.hp2 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1359G>T c.1359G>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1359		chr19	38397504
chr19:38397654	T T	C C	5	a0001c0001t0025 a0001c0001t0026 a0001c0002t0007 others(2): Show a0001c0001t0025 a0001c0001t0026 a0001c0002t0007 a0001c0002t0023 a0001c0002t0024	7	HG00733.hp1 HG01106.hp2 HG01891.hp2 others(4): Show HG00733.hp1 HG01106.hp2 HG01891.hp2 HG02109.hp1 HG03098.hp2 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1509T>C c.1509T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1509		chr19	38397654
chr19:38397898	G G	A A	2	a0001c0001t0005 a0001c0001t0012 a0001c0001t0005 a0001c0001t0012	13	HG00673.hp2 HG02080.hp1 NA18939.hp1 others(10): Show HG00673.hp2 HG02080.hp1 NA18939.hp1 NA18951.hp2 NA18955.hp1 NA18973.hp2 NA18974.hp1 NA18980.hp1 NA18983.hp1 NA19011.hp1 NA19012.hp2 NA19060.hp2 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1753G>A c.1753G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1753		chr19	38397898
chr19:38397903	T T	TA TA	4	a0001c0001t0014 a0001c0002t0007 a0001c0002t0023 others(1): Show a0001c0001t0014 a0001c0002t0007 a0001c0002t0023 a0001c0002t0024	6	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(3): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA19010.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1773dupA c.1773dupA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(3): Show TAAAAAAAAAA	1	a0001c0001t0009 a0001c0001t0009	2	HG03130.hp2 HG03516.hp1 HG03130.hp2 HG03516.hp1	3_prime_UTR_variant	MODIFIER	c.1764_1773dupAAAA others(6): Show c.1764_1773dupAAAAAAAAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0013 a0001c0001t0013	1	NA19043.hp2 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.1773_1774insAAAA others(19): Show c.1773_1774insAAAAAAAAAAAAAAAAAAAAAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(17): Show TAAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0008 a0001c0001t0008	2	HG02258.hp1 HG03139.hp1 HG02258.hp1 HG03139.hp1	3_prime_UTR_variant	MODIFIER	c.1773_1774insAAAA others(20): Show c.1773_1774insAAAAAAAAAAAAAAAAAAAAAAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(19): Show TAAAAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0026 a0001c0001t0026	1	HG01891.hp2 HG01891.hp2	3_prime_UTR_variant	MODIFIER	c.1773_1774insAAAA others(22): Show c.1773_1774insAAAAAAAAAAAAAAAAAAAAAAAAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(20): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0025 a0001c0001t0025	1	HG03098.hp2 HG03098.hp2	3_prime_UTR_variant	MODIFIER	c.1773_1774insAAAA others(23): Show c.1773_1774insAAAAAAAAAAAAAAAAAAAAAAAAAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(25): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0028 a0001c0001t0028	1	HG02630.hp2 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.1773_1774insAAAA others(28): Show c.1773_1774insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	T T	TAAAAAAA others(31): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0027 a0001c0001t0027	1	HG02055.hp1 HG02055.hp1	3_prime_UTR_variant	MODIFIER	c.1773_1774insAAAA others(34): Show c.1773_1774insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1774	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	TA TA	T T	4	a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 a0001c0001t0019	80	HG00438.hp1 HG00438.hp2 HG00544.hp1 others(77): Show HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00609.hp1 HG01070.hp2 HG01123.hp1 HG01192.hp2 HG01346.hp1 HG01934.hp1 HG02015.hp1 HG02027.hp2 HG02071.hp1 HG02083.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02257.hp1 HG02258.hp2 HG02300.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02723.hp1 HG02896.hp2 HG03225.hp1 HG03453.hp2 NA18747.hp1 NA18939.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp1 NA18968.hp2 NA18969.hp2 NA18971.hp2 NA18975.hp1 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp1 NA18997.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19067.hp1 NA19070.hp2 NA19077.hp2 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1	3_prime_UTR_variant	MODIFIER	c.1773delA c.1773delA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1773	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397903	TAA TAA	T T	2	a0001c0001t0005 a0001c0001t0012 a0001c0001t0005 a0001c0001t0012	13	HG00673.hp2 HG02080.hp1 NA18939.hp1 others(10): Show HG00673.hp2 HG02080.hp1 NA18939.hp1 NA18951.hp2 NA18955.hp1 NA18973.hp2 NA18974.hp1 NA18980.hp1 NA18983.hp1 NA19011.hp1 NA19012.hp2 NA19060.hp2 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1772_1773delAA c.1772_1773delAA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1772	INFO_REALIGN_3_PRIME	chr19	38397903
chr19:38397947	C C	T T	7	a0001c0001t0003 a0001c0001t0010 a0001c0001t0014 others(4): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0014 a0001c0008t0003 a0001c0011t0003 a0003c0005t0003 a0004c0006t0003	50	HG00099.hp2 HG00558.hp2 HG00597.hp1 others(47): Show HG00099.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG00735.hp1 HG01081.hp1 HG01346.hp2 HG01361.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02129.hp2 HG02155.hp1 HG02273.hp1 HG02293.hp2 HG02602.hp1 HG02738.hp1 HG03017.hp1 HG03239.hp2 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18940.hp2 NA18945.hp2 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18977.hp2 NA18979.hp1 NA18981.hp2 NA18986.hp2 NA18991.hp1 NA18998.hp2 NA18999.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp2 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19075.hp2 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1802C>T c.1802C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1802		chr19	38397947
chr19:38398020	C C	T T	2	a0001c0001t0008 a0001c0001t0013 a0001c0001t0008 a0001c0001t0013	3	HG02258.hp1 HG03139.hp1 NA19043.hp2 HG02258.hp1 HG03139.hp1 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.1875C>T c.1875C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1875		chr19	38398020
chr19:38398028	T T	G G	1	a0001c0001t0012 a0001c0001t0012	2	NA18939.hp1 NA18951.hp2 NA18939.hp1 NA18951.hp2	3_prime_UTR_variant	MODIFIER	c.1883T>G c.1883T>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1883		chr19	38398028
chr19:38398072	A A	C C	3	a0001c0002t0007 a0001c0002t0023 a0001c0002t0024 a0001c0002t0007 a0001c0002t0023 a0001c0002t0024	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1927A>C c.1927A>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	1927		chr19	38398072
chr19:38398147	C C	G G	2	a0001c0001t0027 a0001c0001t0028 a0001c0001t0027 a0001c0001t0028	2	HG02055.hp1 HG02630.hp2 HG02055.hp1 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.2002C>G c.2002C>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2002		chr19	38398147
chr19:38398224	C C	CTATT CTATT	4	a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 others(1): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0001t0018	6	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(3): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2 NA19070.hp2	3_prime_UTR_variant	MODIFIER	c.2105_2108dupATTT c.2105_2108dupATTT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2109	INFO_REALIGN_3_PRIME	chr19	38398224
chr19:38398224	C C	CTATTTAT others(5): Show CTATTTATTTATT	2	a0001c0002t0007 a0001c0002t0023 a0001c0002t0007 a0001c0002t0023	4	HG00733.hp1 HG02109.hp1 HG03654.hp1 others(1): Show HG00733.hp1 HG02109.hp1 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.2097_2108dupATTT others(8): Show c.2097_2108dupATTTATTTATTT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2109	INFO_REALIGN_3_PRIME	chr19	38398224
chr19:38398224	C C	CTATTTAT others(9): Show CTATTTATTTATTTATT	1	a0001c0002t0024 a0001c0002t0024	1	HG01106.hp2 HG01106.hp2	3_prime_UTR_variant	MODIFIER	c.2093_2108dupATTT others(12): Show c.2093_2108dupATTTATTTATTTATTT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2109	INFO_REALIGN_3_PRIME	chr19	38398224
chr19:38398224	CTATT CTATT	C C	4	a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 others(1): Show a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028	4	HG01891.hp2 HG02055.hp1 HG02630.hp2 others(1): Show HG01891.hp2 HG02055.hp1 HG02630.hp2 HG03098.hp2	3_prime_UTR_variant	MODIFIER	c.2105_2108delATTT c.2105_2108delATTT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2105	INFO_REALIGN_3_PRIME	chr19	38398224
chr19:38398449	G G	A A	1	a0001c0001t0015 a0001c0001t0015	1	HG03927.hp2 HG03927.hp2	3_prime_UTR_variant	MODIFIER	c.2304G>A c.2304G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2304		chr19	38398449
chr19:38398619	G G	A A	1	a0001c0001t0009 a0001c0001t0009	2	HG03130.hp2 HG03516.hp1 HG03130.hp2 HG03516.hp1	3_prime_UTR_variant	MODIFIER	c.2474G>A c.2474G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2474		chr19	38398619
chr19:38398853	A A	T T	1	a0001c0001t0019 a0001c0001t0019	1	NA19063.hp2 NA19063.hp2	3_prime_UTR_variant	MODIFIER	c.2708A>T c.2708A>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2708		chr19	38398853
chr19:38398998	C C	T T	3	a0001c0002t0007 a0001c0002t0023 a0001c0002t0024 a0001c0002t0007 a0001c0002t0023 a0001c0002t0024	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.2853C>T c.2853C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2853		chr19	38398998
chr19:38399073	G G	A A	1	a0001c0001t0016 a0001c0001t0016	1	HG01433.hp1 HG01433.hp1	3_prime_UTR_variant	MODIFIER	c.2928G>A c.2928G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	2928		chr19	38399073
chr19:38399158	T T	A A	2	a0001c0002t0007 a0001c0002t0024 a0001c0002t0007 a0001c0002t0024	4	HG00733.hp1 HG01106.hp2 HG03654.hp1 others(1): Show HG00733.hp1 HG01106.hp2 HG03654.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.3013T>A c.3013T>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	3013		chr19	38399158
chr19:38399245	C C	T T	1	a0001c0001t0017 a0001c0001t0017	1	HG00280.hp2 HG00280.hp2	3_prime_UTR_variant	MODIFIER	c.3100C>T c.3100C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	3100		chr19	38399245
chr19:38399371	G G	A A	4	a0001c0001t0002 a0001c0001t0018 a0001c0001t0019 others(1): Show a0001c0001t0002 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021	61	HG00438.hp1 HG00544.hp1 HG00609.hp1 others(58): Show HG00438.hp1 HG00544.hp1 HG00609.hp1 HG01123.hp1 HG01192.hp2 HG01346.hp1 HG01934.hp1 HG02015.hp1 HG02083.hp1 HG02135.hp1 HG02135.hp2 HG02257.hp1 HG02258.hp2 HG02300.hp2 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02896.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 NA18747.hp1 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18950.hp1 NA18951.hp1 NA18953.hp2 NA18956.hp1 NA18960.hp2 NA18962.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp1 NA18982.hp1 NA18982.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp2 NA18997.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19063.hp2 NA19067.hp1 NA19070.hp2 NA19077.hp2 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1	3_prime_UTR_variant	MODIFIER	c.3226G>A c.3226G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	3226		chr19	38399371
chr19:38399427	A A	T T	2	a0001c0001t0027 a0001c0001t0028 a0001c0001t0027 a0001c0001t0028	2	HG02055.hp1 HG02630.hp2 HG02055.hp1 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.3282A>T c.3282A>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	6/6	3282		chr19	38399427

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr19:38388912	A A	G G	1	a0001c0011t0003g0100 a0001c0011t0003g0100	1	NA19075.hp2 NA19075.hp2	intron_variant	MODIFIER	c.-5+105A>G c.-5+105A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	1/5		chr19	38388912
chr19:38389467	A A	G G	1	a0001c0001t0001g0099 a0001c0001t0001g0099	1	NA19240.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-5+660A>G c.-5+660A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	1/5		chr19	38389467
chr19:38389516	G G	C C	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG02273.hp2 HG02273.hp2	intron_variant	MODIFIER	c.-5+709G>C c.-5+709G>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	1/5		chr19	38389516
chr19:38389870	T T	C C	4	a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 others(1): Show a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0099	4	HG01884.hp1 HG02723.hp2 HG02895.hp1 others(1): Show HG01884.hp1 HG02723.hp2 HG02895.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-4-429T>C c.-4-429T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	1/5		chr19	38389870
chr19:38390094	G G	A A	2	a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0025g0025 a0001c0001t0026g0025	2	HG01891.hp2 HG03098.hp2 HG01891.hp2 HG03098.hp2	intron_variant	MODIFIER	c.-4-205G>A c.-4-205G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	1/5		chr19	38390094
chr19:38390231	A A	G G	2	a0001c0004t0011g0097 a0001c0004t0011g0098 a0001c0004t0011g0097 a0001c0004t0011g0098	2	HG03942.hp2 NA19067.hp2 HG03942.hp2 NA19067.hp2	intron_variant	MODIFIER	c.-4-68A>G c.-4-68A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	1/5		chr19	38390231
chr19:38390487	A A	G G	1	a0001c0001t0002g0096 a0001c0001t0002g0096	1	NA19002.hp1 NA19002.hp1	splice_region_variant&intron_variant	LOW	c.177+8A>G c.177+8A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390487
chr19:38390728	C C	T T	3	a0001c0001t0002g0024 a0001c0001t0002g0038 a0001c0001t0021g0095 a0001c0001t0002g0024 a0001c0001t0002g0038 a0001c0001t0021g0095	6	HG02257.hp1 HG02258.hp2 HG02622.hp2 others(3): Show HG02257.hp1 HG02258.hp2 HG02622.hp2 HG02896.hp2 HG03453.hp2 HG03471.hp2	intron_variant	MODIFIER	c.177+249C>T c.177+249C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390728
chr19:38390764	G G	GC GC	28	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0012 others(25): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0099 a0001c0001t0003g0007 a0001c0001t0003g0029 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0005g0053 a0001c0001t0006g0002 a0001c0001t0017g0002 a0001c0001t0021g0095 a0004c0006t0003g0007 a0005c0009t0001g0002	85	HG00099.hp1 HG00280.hp2 HG00558.hp2 others(82): Show HG00099.hp1 HG00280.hp2 HG00558.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01433.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02080.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02293.hp1 HG02630.hp1 HG02647.hp2 HG02683.hp1 HG02809.hp1 HG02809.hp2 HG02965.hp2 HG03098.hp1 HG03139.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03516.hp2 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18940.hp2 NA18941.hp2 NA18943.hp1 NA18945.hp2 NA18956.hp2 NA18957.hp1 NA18967.hp2 NA18975.hp2 NA18977.hp1 NA18981.hp2 NA18983.hp2 NA18985.hp1 NA18991.hp1 NA18997.hp1 NA18999.hp1 NA19007.hp2 NA19009.hp1 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19075.hp1 NA19087.hp2 NA19089.hp1 NA19091.hp2 NA19240.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.177+298dupC c.177+298dupC	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38390764
chr19:38390764	G G	GCC GCC	16	a0001c0001t0001g0006 a0001c0001t0001g0027 a0001c0001t0001g0047 others(13): Show a0001c0001t0001g0006 a0001c0001t0001g0027 a0001c0001t0001g0047 a0001c0001t0003g0003 a0001c0001t0003g0026 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0006g0006 a0001c0001t0010g0003 a0001c0001t0012g0044 a0001c0001t0016g0006 a0001c0004t0011g0097 a0001c0007t0001g0006 a0001c0008t0003g0003 a0001c0010t0001g0006	42	HG00323.hp1 HG00408.hp1 HG00597.hp1 others(39): Show HG00323.hp1 HG00408.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG01123.hp2 HG01192.hp1 HG01346.hp2 HG01361.hp1 HG01433.hp1 HG01978.hp1 HG02129.hp2 HG02155.hp1 HG02293.hp2 HG02486.hp1 HG02738.hp1 HG03017.hp1 HG03831.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 NA18906.hp2 NA18939.hp1 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18977.hp2 NA18979.hp1 NA18986.hp2 NA18991.hp2 NA18999.hp2 NA19067.hp2 NA19080.hp1 NA19087.hp1 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.177+297_177+298dup others(2): Show c.177+297_177+298dupCC	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38390764
chr19:38390764	GC GC	G G	13	a0001c0001t0001g0009 a0001c0001t0001g0082 a0001c0001t0001g0083 others(10): Show a0001c0001t0001g0009 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0038 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0084 a0001c0001t0005g0081 a0001c0001t0025g0025 a0001c0001t0026g0025	27	HG00621.hp2 HG01346.hp1 HG01891.hp2 others(24): Show HG00621.hp2 HG01346.hp1 HG01891.hp2 HG01928.hp2 HG01981.hp1 HG02056.hp2 HG02080.hp2 HG02135.hp2 HG02257.hp1 HG02258.hp2 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02738.hp2 HG02896.hp2 HG02965.hp1 HG03098.hp2 HG03453.hp2 NA18522.hp2 NA18747.hp1 NA18967.hp1 NA18973.hp1 NA18980.hp1 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA19000.hp1	intron_variant	MODIFIER	c.177+298delC c.177+298delC	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38390764
chr19:38390764	GCC GCC	G G	13	a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0016 others(10): Show a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0096 a0001c0001t0018g0005 a0001c0001t0019g0004	46	HG00438.hp1 HG00544.hp1 HG00609.hp1 others(43): Show HG00438.hp1 HG00544.hp1 HG00609.hp1 HG01123.hp1 HG01192.hp2 HG01934.hp1 HG02015.hp1 HG02135.hp1 HG02300.hp2 HG02615.hp2 HG03225.hp1 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18950.hp1 NA18953.hp2 NA18956.hp1 NA18960.hp2 NA18962.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp1 NA18982.hp1 NA18982.hp2 NA18990.hp2 NA18997.hp2 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19063.hp2 NA19067.hp1 NA19070.hp2 NA19077.hp2 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1	intron_variant	MODIFIER	c.177+297_177+298del others(2): Show c.177+297_177+298delCC	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38390764
chr19:38390768	C C	G G	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	NA19057.hp2 NA19057.hp2	intron_variant	MODIFIER	c.177+289C>G c.177+289C>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390768
chr19:38390769	C C	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.177+290C>A c.177+290C>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390769
chr19:38390771	C C	T T	2	a0001c0001t0001g0037 a0001c0001t0015g0037 a0001c0001t0001g0037 a0001c0001t0015g0037	2	HG03927.hp2 HG04228.hp1 HG03927.hp2 HG04228.hp1	intron_variant	MODIFIER	c.177+292C>T c.177+292C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390771
chr19:38390772	C C	CG CG	7	a0001c0001t0002g0008 a0001c0001t0004g0008 a0001c0001t0004g0023 others(4): Show a0001c0001t0002g0008 a0001c0001t0004g0008 a0001c0001t0004g0023 a0001c0001t0004g0036 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0093	21	HG00438.hp2 HG01070.hp2 HG02027.hp2 others(18): Show HG00438.hp2 HG01070.hp2 HG02027.hp2 HG02071.hp1 HG02083.hp1 HG02132.hp2 HG02615.hp1 HG02723.hp1 NA18939.hp2 NA18950.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp2 NA18963.hp1 NA18971.hp2 NA18981.hp1 NA18995.hp1 NA19010.hp1 NA19057.hp1 NA19064.hp1 NA19065.hp2	intron_variant	MODIFIER	c.177+293_177+294ins others(1): Show c.177+293_177+294insG	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390772
chr19:38390816	C C	T T	1	a0001c0002t0023g0077 a0001c0002t0023g0077	1	HG02109.hp1 HG02109.hp1	intron_variant	MODIFIER	c.177+337C>T c.177+337C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390816
chr19:38390913	G G	A A	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.177+434G>A c.177+434G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390913
chr19:38390946	T T	C C	2	a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0025g0025 a0001c0001t0026g0025	2	HG01891.hp2 HG03098.hp2 HG01891.hp2 HG03098.hp2	intron_variant	MODIFIER	c.177+467T>C c.177+467T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38390946
chr19:38391058	G G	GT GT	9	a0001c0001t0001g0035 a0001c0001t0001g0062 a0001c0001t0001g0076 others(6): Show a0001c0001t0001g0035 a0001c0001t0001g0062 a0001c0001t0001g0076 a0001c0001t0002g0084 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0009g0075 a0001c0011t0003g0100	10	HG01192.hp2 HG01981.hp2 HG02896.hp1 others(7): Show HG01192.hp2 HG01981.hp2 HG02896.hp1 HG03130.hp2 HG03704.hp1 NA18956.hp1 NA18998.hp1 NA19000.hp1 NA19075.hp2 NA19086.hp2	intron_variant	MODIFIER	c.177+589dupT c.177+589dupT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38391058
chr19:38391076	G G	T T	2	a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0001t0027g0073 a0001c0001t0028g0074	2	HG02055.hp1 HG02630.hp2 HG02055.hp1 HG02630.hp2	intron_variant	MODIFIER	c.177+597G>T c.177+597G>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391076
chr19:38391190	G G	A A	14	a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 others(11): Show a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0013g0032 a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	14	HG00733.hp1 HG01106.hp2 HG01891.hp2 others(11): Show HG00733.hp1 HG01106.hp2 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp1 HG02630.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03516.hp1 HG03654.hp1 NA19043.hp2 NA20300.hp2	intron_variant	MODIFIER	c.177+711G>A c.177+711G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391190
chr19:38391324	G G	GA GA	10	a0001c0001t0001g0011 a0001c0001t0001g0028 a0001c0001t0001g0051 others(7): Show a0001c0001t0001g0011 a0001c0001t0001g0028 a0001c0001t0001g0051 a0001c0001t0001g0065 a0001c0001t0002g0078 a0001c0001t0002g0084 a0001c0001t0003g0050 a0001c0001t0004g0091 a0001c0001t0025g0025 a0001c0001t0026g0025	16	HG00597.hp2 HG00609.hp2 HG01361.hp2 others(13): Show HG00597.hp2 HG00609.hp2 HG01361.hp2 HG01891.hp2 HG01952.hp2 HG02027.hp2 HG02486.hp2 HG03098.hp1 HG03098.hp2 NA18956.hp2 NA18960.hp1 NA18975.hp2 NA18980.hp2 NA18989.hp2 NA19000.hp1 NA19000.hp2	intron_variant	MODIFIER	c.178-605dupA c.178-605dupA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38391324
chr19:38391324	GA GA	G G	6	a0001c0001t0001g0034 a0001c0001t0001g0060 a0001c0001t0002g0071 others(3): Show a0001c0001t0001g0034 a0001c0001t0001g0060 a0001c0001t0002g0071 a0001c0001t0002g0090 a0001c0001t0003g0026 a0001c0001t0012g0072	8	HG01361.hp1 HG03041.hp2 HG04199.hp2 others(5): Show HG01361.hp1 HG03041.hp2 HG04199.hp2 NA18951.hp1 NA18951.hp2 NA18957.hp1 NA19083.hp1 NA19086.hp2	intron_variant	MODIFIER	c.178-605delA c.178-605delA	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5	INFO_REALIGN_3_PRIME	chr19	38391324
chr19:38391325	A A	G G	2	a0001c0001t0001g0027 a0001c0001t0001g0061 a0001c0001t0001g0027 a0001c0001t0001g0061	3	HG00735.hp2 HG01099.hp2 HG02486.hp1 HG00735.hp2 HG01099.hp2 HG02486.hp1	intron_variant	MODIFIER	c.178-621A>G c.178-621A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391325
chr19:38391340	A A	AG AG	5	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(2): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.178-606_178-605ins others(1): Show c.178-606_178-605insG	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391340
chr19:38391340	A A	G G	3	a0001c0001t0001g0021 a0001c0001t0001g0094 a0001c0001t0004g0036 a0001c0001t0001g0021 a0001c0001t0001g0094 a0001c0001t0004g0036	6	HG02615.hp1 HG02723.hp1 NA18940.hp1 others(3): Show HG02615.hp1 HG02723.hp1 NA18940.hp1 NA18971.hp1 NA19057.hp2 NA19066.hp1	intron_variant	MODIFIER	c.178-606A>G c.178-606A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391340
chr19:38391341	AGAG AGAG	A A	5	a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 others(2): Show a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0013g0032	5	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2	intron_variant	MODIFIER	c.178-604_178-602del others(3): Show c.178-604_178-602delGAG	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391341
chr19:38391374	A A	G G	4	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(1): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0024g0033	4	HG00733.hp1 HG01106.hp2 HG03654.hp1 others(1): Show HG00733.hp1 HG01106.hp2 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.178-572A>G c.178-572A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391374
chr19:38391453	G G	A A	1	a0001c0004t0011g0098 a0001c0004t0011g0098	1	HG03942.hp2 HG03942.hp2	intron_variant	MODIFIER	c.178-493G>A c.178-493G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391453
chr19:38391506	A A	G G	1	a0001c0001t0009g0075 a0001c0001t0009g0075	1	HG03130.hp2 HG03130.hp2	intron_variant	MODIFIER	c.178-440A>G c.178-440A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391506
chr19:38391631	T T	C C	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	HG02148.hp1 HG02148.hp1	intron_variant	MODIFIER	c.178-315T>C c.178-315T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391631
chr19:38391681	TGAGACTG others(5): Show TGAGACTGGGAGG	T T	1	a0001c0001t0003g0048 a0001c0001t0003g0048	1	NA19087.hp1 NA19087.hp1	intron_variant	MODIFIER	c.178-264_178-253del others(12): Show c.178-264_178-253delGAGACTGGGAGG	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391681
chr19:38391885	C C	T T	2	a0001c0001t0001g0059 a0001c0001t0002g0024 a0001c0001t0001g0059 a0001c0001t0002g0024	4	HG02258.hp2 HG02622.hp2 HG02896.hp2 others(1): Show HG02258.hp2 HG02622.hp2 HG02896.hp2 HG03139.hp2	intron_variant	MODIFIER	c.178-61C>T c.178-61C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	2/5		chr19	38391885
chr19:38392141	T T	G G	72	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0002g0004 others(69): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0008 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0038 a0001c0001t0002g0071 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0096 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0004g0008 a0001c0001t0004g0023 a0001c0001t0004g0036 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0093 a0001c0001t0005g0010 a0001c0001t0005g0053 a0001c0001t0005g0066 a0001c0001t0005g0067 a0001c0001t0005g0081 a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0012g0044 a0001c0001t0012g0072 a0001c0001t0013g0032 a0001c0001t0014g0013 a0001c0001t0018g0005 a0001c0001t0019g0004 a0001c0001t0021g0095 a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033 a0001c0008t0003g0003 a0001c0011t0003g0100 a0003c0005t0003g0013 a0004c0006t0003g0007	161	HG00099.hp2 HG00438.hp1 HG00438.hp2 others(158): Show HG00099.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG01070.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01192.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01891.hp2 HG01934.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02738.hp1 HG02896.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19070.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA20300.hp2 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.346+27T>G c.346+27T>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	3/5		chr19	38392141
chr19:38392358	A A	G G	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.423+70A>G c.423+70A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392358
chr19:38392406	T T	C C	5	a0001c0001t0002g0016 a0001c0001t0002g0071 a0001c0001t0002g0084 others(2): Show a0001c0001t0002g0016 a0001c0001t0002g0071 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0088	8	HG02135.hp1 NA18945.hp1 NA18951.hp1 others(5): Show HG02135.hp1 NA18945.hp1 NA18951.hp1 NA18956.hp1 NA19000.hp1 NA19012.hp1 NA19056.hp2 NA19067.hp1	intron_variant	MODIFIER	c.423+118T>C c.423+118T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392406
chr19:38392603	T T	A A	1	a0001c0011t0003g0100 a0001c0011t0003g0100	1	NA19075.hp2 NA19075.hp2	intron_variant	MODIFIER	c.423+315T>A c.423+315T>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392603
chr19:38392605	A A	T T	1	a0001c0011t0003g0100 a0001c0011t0003g0100	1	NA19075.hp2 NA19075.hp2	intron_variant	MODIFIER	c.423+317A>T c.423+317A>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392605
chr19:38392611	A A	T T	29	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0020 others(26): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0047 a0001c0001t0001g0057 a0001c0001t0002g0087 a0001c0001t0002g0089 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0004g0036 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0014g0013 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0008t0003g0003 a0003c0005t0003g0013 a0004c0006t0003g0007	63	HG00099.hp2 HG00544.hp1 HG00558.hp2 others(60): Show HG00099.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG00735.hp1 HG01081.hp1 HG01192.hp2 HG01346.hp2 HG01361.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02129.hp2 HG02155.hp1 HG02273.hp1 HG02293.hp2 HG02451.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp2 HG02723.hp1 HG02738.hp1 HG02965.hp2 HG03017.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03490.hp1 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18940.hp2 NA18945.hp2 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18977.hp2 NA18979.hp1 NA18981.hp2 NA18986.hp2 NA18991.hp1 NA18998.hp2 NA18999.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp2 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.423+323A>T c.423+323A>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392611
chr19:38392613	T T	A A	1	a0001c0001t0004g0092 a0001c0001t0004g0092	1	NA18939.hp2 NA18939.hp2	intron_variant	MODIFIER	c.423+325T>A c.423+325T>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392613
chr19:38392742	GTCTCA GTCTCA	G G	5	a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 others(2): Show a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0013g0032	5	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2	intron_variant	MODIFIER	c.423+463_423+467del others(5): Show c.423+463_423+467delCATCT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5	INFO_REALIGN_3_PRIME	chr19	38392742
chr19:38392864	C C	T T	1	a0001c0001t0028g0074 a0001c0001t0028g0074	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.423+576C>T c.423+576C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392864
chr19:38392945	G G	C C	36	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0003g0003 others(33): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0013g0032 a0001c0001t0014g0013 a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033 a0001c0008t0003g0003 a0001c0011t0003g0100 a0003c0005t0003g0013 a0004c0006t0003g0007	67	HG00099.hp2 HG00558.hp2 HG00597.hp1 others(64): Show HG00099.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp1 HG01081.hp1 HG01106.hp2 HG01346.hp2 HG01361.hp1 HG01891.hp2 HG01952.hp2 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02109.hp1 HG02129.hp2 HG02155.hp1 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02602.hp1 HG02630.hp2 HG02738.hp1 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18940.hp2 NA18945.hp2 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18977.hp2 NA18979.hp1 NA18981.hp2 NA18986.hp2 NA18991.hp1 NA18998.hp2 NA18999.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp2 NA19043.hp2 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19075.hp2 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA20300.hp2 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.423+657G>C c.423+657G>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38392945
chr19:38393157	T T	C C	72	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0002g0004 others(69): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0008 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0038 a0001c0001t0002g0071 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0096 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0004g0008 a0001c0001t0004g0023 a0001c0001t0004g0036 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0093 a0001c0001t0005g0010 a0001c0001t0005g0053 a0001c0001t0005g0066 a0001c0001t0005g0067 a0001c0001t0005g0081 a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0012g0044 a0001c0001t0012g0072 a0001c0001t0013g0032 a0001c0001t0014g0013 a0001c0001t0018g0005 a0001c0001t0019g0004 a0001c0001t0021g0095 a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033 a0001c0008t0003g0003 a0001c0011t0003g0100 a0003c0005t0003g0013 a0004c0006t0003g0007	161	HG00099.hp2 HG00438.hp1 HG00438.hp2 others(158): Show HG00099.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG01070.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01192.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01891.hp2 HG01934.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02738.hp1 HG02896.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19070.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA20300.hp2 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.423+869T>C c.423+869T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393157
chr19:38393196	A A	C C	1	a0001c0001t0002g0085 a0001c0001t0002g0085	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.423+908A>C c.423+908A>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393196
chr19:38393344	C C	CT CT	17	a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0051 others(14): Show a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0001g0065 a0001c0001t0001g0083 a0001c0001t0002g0004 a0001c0001t0002g0022 a0001c0001t0002g0085 a0001c0001t0002g0090 a0001c0001t0003g0045 a0001c0001t0003g0068 a0001c0001t0004g0093 a0001c0001t0005g0066 a0001c0001t0019g0004 a0001c0011t0003g0100	40	HG00438.hp1 HG00438.hp2 HG00621.hp2 others(37): Show HG00438.hp1 HG00438.hp2 HG00621.hp2 HG00673.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01346.hp1 HG01934.hp1 HG01934.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02300.hp2 HG02486.hp2 HG02602.hp2 HG02615.hp2 HG02647.hp1 HG03098.hp1 HG03942.hp1 NA18953.hp1 NA18953.hp2 NA18960.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18982.hp1 NA18982.hp2 NA18990.hp2 NA18998.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19067.hp1 NA19075.hp2 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1	intron_variant	MODIFIER	c.423+1077dupT c.423+1077dupT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5	INFO_REALIGN_3_PRIME	chr19	38393344
chr19:38393344	C C	CTT CTT	24	a0001c0001t0001g0007 a0001c0001t0003g0003 a0001c0001t0003g0007 others(21): Show a0001c0001t0001g0007 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0026 a0001c0001t0003g0069 a0001c0001t0005g0010 a0001c0001t0005g0053 a0001c0001t0005g0067 a0001c0001t0005g0081 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0012g0044 a0001c0001t0012g0072 a0001c0001t0014g0013 a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0023g0077 a0001c0002t0024g0033 a0001c0008t0003g0003 a0003c0005t0003g0013 a0004c0006t0003g0007	58	HG00558.hp2 HG00597.hp1 HG00621.hp1 others(55): Show HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp2 HG00733.hp1 HG01106.hp2 HG01346.hp2 HG01361.hp1 HG01891.hp2 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02109.hp1 HG02129.hp2 HG02155.hp1 HG02273.hp1 HG02293.hp2 HG02602.hp1 HG02738.hp1 HG03017.hp1 HG03098.hp2 HG03239.hp2 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18939.hp1 NA18940.hp2 NA18945.hp2 NA18951.hp2 NA18955.hp1 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18973.hp2 NA18974.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp2 NA18991.hp1 NA18999.hp2 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19077.hp1 NA19080.hp1 NA19086.hp1 NA19089.hp1 NA20300.hp2 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.423+1076_423+1077d others(4): Show c.423+1076_423+1077dupTT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5	INFO_REALIGN_3_PRIME	chr19	38393344
chr19:38393344	C C	CTTT CTTT	9	a0001c0001t0001g0015 a0001c0001t0003g0015 a0001c0001t0003g0029 others(6): Show a0001c0001t0001g0015 a0001c0001t0003g0015 a0001c0001t0003g0029 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0002t0007g0064	12	HG00099.hp2 HG00735.hp1 HG01081.hp1 others(9): Show HG00099.hp2 HG00735.hp1 HG01081.hp1 HG01952.hp2 HG02055.hp1 HG02630.hp2 HG03453.hp1 HG03471.hp1 HG03654.hp1 NA18967.hp2 NA19002.hp2 NA19087.hp1	intron_variant	MODIFIER	c.423+1075_423+1077d others(5): Show c.423+1075_423+1077dupTTT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5	INFO_REALIGN_3_PRIME	chr19	38393344
chr19:38393344	CT CT	C C	11	a0001c0001t0001g0014 a0001c0001t0001g0030 a0001c0001t0001g0041 others(8): Show a0001c0001t0001g0014 a0001c0001t0001g0030 a0001c0001t0001g0041 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0002g0079 a0001c0001t0002g0086 a0001c0001t0004g0023 a0001c0001t0008g0031 a0001c0001t0009g0031 a0001c0001t0009g0075	18	HG01070.hp2 HG01943.hp2 HG02258.hp1 others(15): Show HG01070.hp2 HG01943.hp2 HG02258.hp1 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG03041.hp1 HG03130.hp2 HG03516.hp1 NA18941.hp2 NA18943.hp2 NA18954.hp1 NA18954.hp2 NA18985.hp2 NA18989.hp1 NA18998.hp1 NA19075.hp1	intron_variant	MODIFIER	c.423+1077delT c.423+1077delT	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5	INFO_REALIGN_3_PRIME	chr19	38393344
chr19:38393530	A A	G G	36	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0003g0003 others(33): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0013g0032 a0001c0001t0014g0013 a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033 a0001c0008t0003g0003 a0001c0011t0003g0100 a0003c0005t0003g0013 a0004c0006t0003g0007	67	HG00099.hp2 HG00558.hp2 HG00597.hp1 others(64): Show HG00099.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp1 HG01081.hp1 HG01106.hp2 HG01346.hp2 HG01361.hp1 HG01891.hp2 HG01952.hp2 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02109.hp1 HG02129.hp2 HG02155.hp1 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02602.hp1 HG02630.hp2 HG02738.hp1 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18940.hp2 NA18945.hp2 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18977.hp2 NA18979.hp1 NA18981.hp2 NA18986.hp2 NA18991.hp1 NA18998.hp2 NA18999.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp2 NA19043.hp2 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19075.hp2 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA20300.hp2 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.424-1113A>G c.424-1113A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393530
chr19:38393539	T T	G G	7	a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0002t0007g0033 others(4): Show a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	7	HG00733.hp1 HG01106.hp2 HG01891.hp2 others(4): Show HG00733.hp1 HG01106.hp2 HG01891.hp2 HG02109.hp1 HG03098.hp2 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.424-1104T>G c.424-1104T>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393539
chr19:38393588	G G	C C	5	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(2): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.424-1055G>C c.424-1055G>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393588
chr19:38393608	T T	C C	5	a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 others(2): Show a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0013g0032	5	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2	intron_variant	MODIFIER	c.424-1035T>C c.424-1035T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393608
chr19:38393642	A A	G G	7	a0001c0001t0002g0017 a0001c0001t0002g0078 a0001c0002t0007g0033 others(4): Show a0001c0001t0002g0017 a0001c0001t0002g0078 a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	10	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(7): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA18975.hp1 NA18989.hp2 NA18997.hp2 NA19004.hp1 NA19007.hp1 NA20300.hp2	intron_variant	MODIFIER	c.424-1001A>G c.424-1001A>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38393642
chr19:38394005	T T	C C	2	a0001c0001t0025g0025 a0001c0001t0026g0025 a0001c0001t0025g0025 a0001c0001t0026g0025	2	HG01891.hp2 HG03098.hp2 HG01891.hp2 HG03098.hp2	intron_variant	MODIFIER	c.424-638T>C c.424-638T>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394005
chr19:38394167	T T	G G	2	a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0068 a0001c0001t0003g0069	2	NA18998.hp2 NA19086.hp1 NA18998.hp2 NA19086.hp1	intron_variant	MODIFIER	c.424-476T>G c.424-476T>G	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394167
chr19:38394193	G G	A A	5	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(2): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.424-450G>A c.424-450G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394193
chr19:38394269	A A	T T	24	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0003g0003 others(21): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0010g0003 a0001c0001t0010g0013 a0001c0001t0014g0013 a0001c0001t0027g0073 a0001c0001t0028g0074 a0001c0008t0003g0003 a0001c0011t0003g0100 a0003c0005t0003g0013 a0004c0006t0003g0007	55	HG00099.hp2 HG00558.hp2 HG00597.hp1 others(52): Show HG00099.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG00735.hp1 HG01081.hp1 HG01346.hp2 HG01361.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02129.hp2 HG02155.hp1 HG02273.hp1 HG02293.hp2 HG02602.hp1 HG02630.hp2 HG02738.hp1 HG03017.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03710.hp1 HG03831.hp2 HG04199.hp2 NA18940.hp2 NA18945.hp2 NA18955.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18977.hp2 NA18979.hp1 NA18981.hp2 NA18986.hp2 NA18991.hp1 NA18998.hp2 NA18999.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp2 NA19063.hp1 NA19065.hp1 NA19070.hp1 NA19075.hp2 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.424-374A>T c.424-374A>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394269
chr19:38394522	C C	T T	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	HG02257.hp2 HG02257.hp2	intron_variant	MODIFIER	c.424-121C>T c.424-121C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394522
chr19:38394539	C C	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG00099.hp1 HG00099.hp1	intron_variant	MODIFIER	c.424-104C>T c.424-104C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394539
chr19:38394596	G G	A A	5	a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 others(2): Show a0001c0001t0008g0031 a0001c0001t0008g0032 a0001c0001t0009g0031 a0001c0001t0009g0075 a0001c0001t0013g0032	5	HG02258.hp1 HG03130.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp1 NA19043.hp2	intron_variant	MODIFIER	c.424-47G>A c.424-47G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	4/5		chr19	38394596
chr19:38394876	G G	A A	5	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(2): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.567+90G>A c.567+90G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38394876
chr19:38394898	C C	T T	1	a0001c0002t0007g0063 a0001c0002t0007g0063	1	NA20300.hp2 NA20300.hp2	intron_variant	MODIFIER	c.567+112C>T c.567+112C>T	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38394898
chr19:38394995	G G	C C	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.567+209G>C c.567+209G>C	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38394995
chr19:38395057	T T	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	3	HG00140.hp2 HG02300.hp1 NA20129.hp1 HG00140.hp2 HG02300.hp1 NA20129.hp1	intron_variant	MODIFIER	c.567+271T>A c.567+271T>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38395057
chr19:38395071	T T	A A	3	a0001c0001t0005g0053 a0001c0001t0005g0067 a0001c0001t0005g0081 a0001c0001t0005g0053 a0001c0001t0005g0067 a0001c0001t0005g0081	3	HG02080.hp1 NA18980.hp1 NA19011.hp1 HG02080.hp1 NA18980.hp1 NA19011.hp1	intron_variant	MODIFIER	c.567+285T>A c.567+285T>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38395071
chr19:38395394	C C	A A	5	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(2): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.568-86C>A c.568-86C>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38395394
chr19:38395411	G G	A A	5	a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 others(2): Show a0001c0002t0007g0033 a0001c0002t0007g0063 a0001c0002t0007g0064 a0001c0002t0023g0077 a0001c0002t0024g0033	5	HG00733.hp1 HG01106.hp2 HG02109.hp1 others(2): Show HG00733.hp1 HG01106.hp2 HG02109.hp1 HG03654.hp1 NA20300.hp2	intron_variant	MODIFIER	c.568-69G>A c.568-69G>A	SPRED3	ENSG00000188766.13	transcript	ENST00000691638.1	protein_coding	5/5		chr19	38395411

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JoGo Local Haplotype Explorer (on iGV) SPRED3_chr19_38383697_38404587

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 11)

TTranscript Level Haplotype Info (Total: 28)

GGenebody Level Haplotype Info (Total: 100)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 11)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 36)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 126)

Haplotype Details by Sample (Haploid Level) (Total: 360)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 6)

CCoding Level Variants (Synonymous Mutations) (Total: 8)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 45)

GGenebody Level Haplotype Variants (Intron) (Total: 69)

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Annotation (Repeats)

Annotation (SNP Array)