Joint Open Genome and Omics Platform (JoGo)

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geneid	51188
ensemblid	ENSG00000008324.12
hgncid	15593
symbol	SS18L2
name	SS18 like 2
refseq_nuc	NM_001370300.1
refseq_prot	NP_001357229.1
ensembl_nuc	ENST00000011691.6
ensembl_prot	ENSP00000011691.4
mane_status	MANE Select
chr	chr3
start	42590860
end	42596934
strand	+
ver	v1.2
region	chr3:42590860-42596934
region5000	chr3:42585860-42601934
regionname0	SS18L2_chr3_42590860_42596934
regionname5000	SS18L2_chr3_42585860_42601934

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	77	388	88	74	166	14	44	130	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	234	387	87	74	166	14	44	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
c0002	0/0	234	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	2464	176	16	49	72	10	27	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0002	0/0	2464	84	5	14	53	3	9	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0003	0/0	2464	47	35	6	2	0	4	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0004	0/0	2464	27	5	2	19	0	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0005	0/0	2464	12	11	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0006	0/0	2464	6	0	1	3	1	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0007	0/0	2464	6	6	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0008	0/0	2464	5	0	0	5	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0009	0/0	2464	5	5	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0010	0/0	2464	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0011	0/0	2464	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0012	0/0	2464	2	1	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0013	0/0	2464	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0014	0/0	2464	2	0	0	2	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0015	0/0	2464	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0016	0/0	2464	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0017	0/0	2840	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0018	0/0	2464	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0019	0/0	2464	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0020	0/0	2464	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0021	0/0	2464	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
t0022	0/0	2464	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	153	7	41	73	9	21	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0002	0/0	84	20	14	39	3	8	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0003	0/0	19	0	1	18	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0004	0/0	19	8	0	9	0	2	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0005	0/0	15	10	3	2	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0006	0/0	13	4	2	5	1	1	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0007	0/0	10	3	3	1	0	3	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0008	0/0	6	1	1	0	0	4	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0009	0/0	5	0	0	5	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0010	0/0	5	3	2	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0011	0/0	5	3	1	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0012	0/0	4	0	0	4	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0013	0/0	4	0	0	0	0	4	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0014	0/0	4	4	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0015	0/0	4	4	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0016	0/0	4	3	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0017	0/0	3	1	1	0	1	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0018	0/0	3	2	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0019	0/0	3	3	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0020	0/0	3	3	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0021	0/0	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0022	0/0	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0023	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0024	0/0	1	0	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0025	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0026	0/0	1	0	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0027	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0028	0/0	1	0	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0029	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0030	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0031	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0032	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0033	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0034	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0035	0/0	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0036	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0037	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0038	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
g0039	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	234	387	87	74	166	14	44	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0002	0/0	234	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	2697	176	16	49	72	10	27	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0002	0/0	2697	84	5	14	53	3	9	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0003	0/0	2697	47	35	6	2	0	4	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0004	0/0	2697	27	5	2	19	0	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0005	0/0	2697	11	10	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0006	0/0	2697	6	0	1	3	1	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0007	0/0	2697	6	6	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0008	0/0	2697	5	0	0	5	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0009	0/0	2697	5	5	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0010	0/0	2697	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0011	0/0	2697	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0012	0/0	2697	2	1	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0013	0/0	2697	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0014	0/0	2697	2	0	0	2	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0015	0/0	2697	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0016	0/0	2697	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0017	0/0	3073	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0018	0/0	2697	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0019	0/0	2697	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0020	0/0	2697	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0021	0/0	2697	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0001t0022	0/0	2697	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934
a0001c0002t0005	0/0	2697	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	copy fasta	chr3	42585860	42601934

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	145	7	41	66	9	20	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0007	0/0	10	3	3	1	0	3	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0012	0/0	4	0	0	4	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0013	0/0	4	0	0	0	0	4	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0017	0/0	3	1	1	0	1	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0018	0/0	3	2	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0019	0/0	3	3	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0024	0/0	1	0	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0026	0/0	1	0	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0027	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0001g0028	0/0	1	0	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0002	0/0	60	1	14	35	3	7	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0004	0/0	13	2	0	9	0	2	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0009	0/0	5	0	0	5	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0011	0/0	3	2	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0033	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0036	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0002g0038	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0002	0/0	4	4	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0005	0/0	14	9	3	2	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0008	0/0	6	1	1	0	0	4	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0010	0/0	5	3	2	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0014	0/0	4	4	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0015	0/0	4	4	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0020	0/0	3	3	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0022	0/0	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0023	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0025	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0029	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0031	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0003g0039	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0004g0003	0/0	17	0	1	16	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0004g0006	0/0	7	4	1	1	0	1	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0004g0030	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0004g0034	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0004g0037	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0005g0002	0/0	7	7	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0005g0004	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0005g0016	0/0	3	2	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0006g0006	0/0	5	0	1	3	1	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0006g0035	0/0	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0007g0002	0/0	5	5	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0007g0004	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0008g0001	0/0	5	0	0	5	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0009g0002	0/0	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0009g0004	0/0	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0009g0032	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0010g0002	0/0	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0011g0021	0/0	3	0	0	3	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0012g0011	0/0	2	1	1	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0013g0004	0/0	2	2	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0014g0001	0/0	2	0	0	2	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0015g0001	0/0	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0016g0002	0/0	1	0	0	0	0	1	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0017g0003	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0018g0006	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0019g0003	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0020g0005	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0021g0016	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0001t0022g0002	0/0	1	0	0	1	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
a0001c0002t0005g0002	0/0	1	1	0	0	0	0	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00099	hp2	a0001	c0001	t0001	g0017	EUR	GBR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00140	hp2	a0001	c0001	t0002	g0002	EUR	GBR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00280	hp2	a0001	c0001	t0006	g0006	EUR	FIN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00408	hp2	a0001	c0001	t0014	g0001	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00423	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00544	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00544	hp2	a0001	c0001	t0001	g0012	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00558	hp1	a0001	c0001	t0004	g0003	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00558	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00597	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00597	hp2	a0001	c0001	t0004	g0034	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00621	hp1	a0001	c0001	t0002	g0004	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00639	hp2	a0001	c0001	t0004	g0006	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00642	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00673	hp1	a0001	c0001	t0004	g0003	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00738	hp2	a0001	c0001	t0001	g0007	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00741	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG00741	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01074	hp2	a0001	c0001	t0005	g0016	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01106	hp2	a0001	c0001	t0006	g0006	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01109	hp2	a0001	c0001	t0003	g0005	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01167	hp2	a0001	c0001	t0003	g0005	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01169	hp2	a0001	c0001	t0003	g0005	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01192	hp2	a0001	c0001	t0003	g0010	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01243	hp1	a0001	c0001	t0012	g0011	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01243	hp2	a0001	c0001	t0001	g0018	AMR	PUR	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01256	hp1	a0001	c0001	t0001	g0017	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01256	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01258	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01258	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01346	hp2	a0001	c0001	t0003	g0008	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01358	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01361	hp1	a0001	c0001	t0001	g0007	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01361	hp2	a0001	c0001	t0001	g0007	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01433	hp1	a0001	c0001	t0001	g0026	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01496	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01891	hp1	a0001	c0001	t0005	g0002	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01891	hp2	a0001	c0001	t0003	g0014	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01934	hp1	a0001	c0001	t0003	g0010	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01943	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01952	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01975	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02004	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02004	hp2	a0001	c0001	t0001	g0024	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02015	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02027	hp1	a0001	c0001	t0004	g0006	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02027	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02055	hp1	a0001	c0001	t0009	g0004	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02056	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02056	hp2	a0001	c0001	t0001	g0007	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02080	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02080	hp2	a0001	c0001	t0022	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02083	hp1	a0001	c0001	t0002	g0036	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02083	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02132	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02145	hp1	a0001	c0001	t0005	g0004	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02145	hp2	a0001	c0001	t0002	g0004	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02155	hp1	a0001	c0001	t0002	g0002	EAS	CDX	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02257	hp1	a0001	c0001	t0004	g0030	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02258	hp1	a0001	c0001	t0001	g0007	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02258	hp2	a0001	c0001	t0007	g0002	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02293	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02300	hp2	a0001	c0001	t0004	g0003	AMR	PEL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02451	hp1	a0001	c0001	t0003	g0008	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02451	hp2	a0001	c0001	t0001	g0007	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02523	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02572	hp1	a0001	c0001	t0003	g0020	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02572	hp2	a0001	c0001	t0007	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02615	hp1	a0001	c0001	t0002	g0004	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02615	hp2	a0001	c0001	t0005	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02622	hp1	a0001	c0001	t0003	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02622	hp2	a0001	c0001	t0003	g0005	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02630	hp1	a0001	c0001	t0003	g0005	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02630	hp2	a0001	c0001	t0003	g0015	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02647	hp1	a0001	c0001	t0003	g0020	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02647	hp2	a0001	c0001	t0007	g0004	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02683	hp1	a0001	c0001	t0001	g0013	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02698	hp1	a0001	c0001	t0001	g0013	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02723	hp1	a0001	c0001	t0003	g0014	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02723	hp2	a0001	c0001	t0013	g0004	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02738	hp1	a0001	c0001	t0001	g0013	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02738	hp2	a0001	c0001	t0016	g0002	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02809	hp1	a0001	c0001	t0003	g0025	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02809	hp2	a0001	c0002	t0005	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02818	hp1	a0001	c0001	t0003	g0005	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02886	hp1	a0001	c0001	t0003	g0015	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02886	hp2	a0001	c0001	t0007	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02895	hp1	a0001	c0001	t0003	g0010	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02895	hp2	a0001	c0001	t0003	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02896	hp1	a0001	c0001	t0003	g0010	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02896	hp2	a0001	c0001	t0009	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02897	hp1	a0001	c0001	t0009	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02897	hp2	a0001	c0001	t0003	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02965	hp1	a0001	c0001	t0003	g0023	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02970	hp1	a0001	c0001	t0005	g0016	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02976	hp1	a0001	c0001	t0003	g0002	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02976	hp2	a0001	c0001	t0005	g0002	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03017	hp1	a0001	c0001	t0001	g0007	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03017	hp2	a0001	c0001	t0001	g0007	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03041	hp1	a0001	c0001	t0001	g0007	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03041	hp2	a0001	c0001	t0007	g0002	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03098	hp1	a0001	c0001	t0003	g0022	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03098	hp2	a0001	c0001	t0003	g0022	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03130	hp1	a0001	c0001	t0020	g0005	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03130	hp2	a0001	c0001	t0021	g0016	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03139	hp1	a0001	c0001	t0003	g0010	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03139	hp2	a0001	c0001	t0004	g0006	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03195	hp1	a0001	c0001	t0003	g0014	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03195	hp2	a0001	c0001	t0005	g0016	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03209	hp1	a0001	c0001	t0001	g0019	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03209	hp2	a0001	c0001	t0009	g0004	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03225	hp1	a0001	c0001	t0001	g0019	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03225	hp2	a0001	c0001	t0003	g0015	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03239	hp1	a0001	c0001	t0003	g0008	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03239	hp2	a0001	c0001	t0001	g0007	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03453	hp1	a0001	c0001	t0004	g0006	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03453	hp2	a0001	c0001	t0003	g0005	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03486	hp1	a0001	c0001	t0005	g0002	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03486	hp2	a0001	c0001	t0003	g0005	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03490	hp1	a0001	c0001	t0003	g0008	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03490	hp2	a0001	c0001	t0001	g0013	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03491	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03492	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03492	hp2	a0001	c0001	t0003	g0008	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03516	hp1	a0001	c0001	t0003	g0005	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03516	hp2	a0001	c0001	t0004	g0006	AFR	ESN	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03540	hp1	a0001	c0001	t0002	g0011	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03540	hp2	a0001	c0001	t0003	g0020	AFR	GWD	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03579	hp1	a0001	c0001	t0013	g0004	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03579	hp2	a0001	c0001	t0003	g0029	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03654	hp1	a0001	c0001	t0004	g0006	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03688	hp1	a0001	c0001	t0002	g0002	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03688	hp2	a0001	c0001	t0003	g0008	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03704	hp1	a0001	c0001	t0006	g0035	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03710	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03831	hp1	a0001	c0001	t0002	g0002	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03831	hp2	a0001	c0001	t0002	g0004	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03927	hp1	a0001	c0001	t0002	g0002	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04184	hp1	a0001	c0001	t0002	g0002	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04204	hp1	a0001	c0001	t0015	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18522	hp1	a0001	c0001	t0002	g0002	AFR	YRI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18522	hp2	a0001	c0001	t0001	g0018	AFR	YRI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18612	hp2	a0001	c0001	t0002	g0002	EAS	CHB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18747	hp2	a0001	c0001	t0002	g0002	EAS	CHB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18906	hp1	a0001	c0001	t0004	g0006	AFR	YRI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18906	hp2	a0001	c0001	t0003	g0039	AFR	YRI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18941	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18941	hp2	a0001	c0001	t0006	g0006	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18943	hp1	a0001	c0001	t0014	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18952	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18954	hp1	a0001	c0001	t0006	g0006	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18954	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18957	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18960	hp2	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18961	hp1	a0001	c0001	t0008	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18961	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18963	hp1	a0001	c0001	t0008	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18963	hp2	a0001	c0001	t0006	g0006	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18964	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18965	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18965	hp2	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18966	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18967	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18969	hp1	a0001	c0001	t0011	g0021	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18971	hp2	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18972	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18973	hp2	a0001	c0001	t0008	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18975	hp1	a0001	c0001	t0001	g0012	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18975	hp2	a0001	c0001	t0002	g0009	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18978	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18978	hp2	a0001	c0001	t0002	g0033	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18980	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18982	hp1	a0001	c0001	t0003	g0005	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18982	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18983	hp2	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18985	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18985	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18990	hp2	a0001	c0001	t0010	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18991	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18994	hp1	a0001	c0001	t0004	g0037	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18995	hp1	a0001	c0001	t0002	g0009	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18995	hp2	a0001	c0001	t0002	g0011	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA18997	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19000	hp1	a0001	c0001	t0002	g0009	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19001	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19001	hp2	a0001	c0001	t0002	g0009	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19003	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19003	hp2	a0001	c0001	t0002	g0009	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19005	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19011	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19043	hp2	a0001	c0001	t0003	g0005	AFR	LWK	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19055	hp1	a0001	c0001	t0001	g0012	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19055	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19056	hp1	a0001	c0001	t0010	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19057	hp1	a0001	c0001	t0008	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19057	hp2	a0001	c0001	t0017	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19062	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19062	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19063	hp2	a0001	c0001	t0002	g0038	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19065	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19066	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19066	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19070	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19072	hp1	a0001	c0001	t0001	g0027	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19072	hp2	a0001	c0001	t0018	g0006	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19074	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19075	hp2	a0001	c0001	t0001	g0012	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19076	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19076	hp2	a0001	c0001	t0011	g0021	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19077	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19077	hp2	a0001	c0001	t0008	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19079	hp2	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19080	hp1	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19080	hp2	a0001	c0001	t0011	g0021	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19081	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19082	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19083	hp1	a0001	c0001	t0003	g0005	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19084	hp1	a0001	c0001	t0010	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19084	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19089	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19089	hp2	a0001	c0001	t0019	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19090	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19090	hp2	a0001	c0001	t0004	g0003	EAS	JPT	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19240	hp1	a0001	c0001	t0007	g0002	AFR	YRI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA19240	hp2	a0001	c0001	t0003	g0005	AFR	YRI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20752	hp2	a0001	c0001	t0002	g0002	EUR	TSI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20805	hp2	a0001	c0001	t0002	g0002	EUR	TSI	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20905	hp2	a0001	c0001	t0002	g0004	SAS	GIH	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01123	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG01123	hp2	a0001	c0001	t0001	g0028	AMR	CLM	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02109	hp1	a0001	c0001	t0001	g0017	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02109	hp2	a0001	c0001	t0003	g0015	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02486	hp1	a0001	c0001	t0001	g0018	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02486	hp2	a0001	c0001	t0002	g0011	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG02559	hp2	a0001	c0001	t0009	g0032	AFR	ACB	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03471	hp1	a0001	c0001	t0003	g0031	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG03471	hp2	a0001	c0001	t0012	g0011	AFR	MSL	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG06807	hp1	a0001	c0001	t0001	g0019	AFR	USA	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
HG06807	hp2	a0001	c0001	t0005	g0002	AFR	USA	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20300	hp1	a0001	c0001	t0003	g0014	AFR	USA	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA20300	hp2	a0001	c0001	t0005	g0002	AFR	USA	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA21309	hp1	a0001	c0001	t0003	g0005	AFR	LWK	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
NA21309	hp2	a0001	c0001	t0005	g0002	AFR	LWK	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	SS18L2_chr3_42585860_42601934	SS18L2	chr3	42585860	42601934

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:42590909	C C	T T	1	a0001c0002 a0001c0002	1	HG02809.hp2 HG02809.hp2	synonymous_variant	LOW	c.12C>T c.12C>T	p.Ala4Ala p.Ala4Ala	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/3	50/2697	12/234	4/77			chr3	42590909

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr3:42590862	G G	A A	1	a0001c0001t0015 a0001c0001t0015	1	HG04204.hp1 HG04204.hp1	5_prime_UTR_variant	MODIFIER	c.-36G>A c.-36G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/3	36		chr3	42590862
chr3:42594554	G G	A A	1	a0001c0001t0010 a0001c0001t0010	3	NA18990.hp2 NA19056.hp1 NA19084.hp1 NA18990.hp2 NA19056.hp1 NA19084.hp1	3_prime_UTR_variant	MODIFIER	c.45G>A c.45G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	45		chr3	42594554
chr3:42594649	G G	A A	20	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(17): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0002t0005	209	HG00140.hp2 HG00280.hp2 HG00423.hp2 others(206): Show HG00140.hp2 HG00280.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19072.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.140G>A c.140G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	140		chr3	42594649
chr3:42594746	G G	A A	1	a0001c0001t0016 a0001c0001t0016	1	HG02738.hp2 HG02738.hp2	3_prime_UTR_variant	MODIFIER	c.237G>A c.237G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	237		chr3	42594746
chr3:42594958	C C	T T	1	a0001c0001t0011 a0001c0001t0011	3	NA18969.hp1 NA19076.hp2 NA19080.hp2 NA18969.hp1 NA19076.hp2 NA19080.hp2	3_prime_UTR_variant	MODIFIER	c.449C>T c.449C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	449		chr3	42594958
chr3:42595753	C C	T T	9	a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0001c0001t0021 a0001c0001t0022 a0001c0002t0005	113	HG00140.hp2 HG00423.hp2 HG00544.hp1 others(110): Show HG00140.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01123.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02258.hp2 HG02293.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp2 HG03195.hp2 HG03209.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03688.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18952.hp2 NA18954.hp2 NA18957.hp1 NA18961.hp2 NA18965.hp1 NA18967.hp2 NA18971.hp1 NA18972.hp2 NA18975.hp2 NA18978.hp2 NA18980.hp2 NA18982.hp2 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19055.hp2 NA19056.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19074.hp2 NA19076.hp1 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1244C>T c.1244C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1244		chr3	42595753
chr3:42595787	T T	C C	1	a0001c0001t0021 a0001c0001t0021	1	HG03130.hp2 HG03130.hp2	3_prime_UTR_variant	MODIFIER	c.1278T>C c.1278T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1278		chr3	42595787
chr3:42595920	C C	T T	1	a0001c0001t0013 a0001c0001t0013	2	HG02723.hp2 HG03579.hp1 HG02723.hp2 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.1411C>T c.1411C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1411		chr3	42595920
chr3:42595970	A A	G G	1	a0001c0001t0007 a0001c0001t0007	6	HG02258.hp2 HG02572.hp2 HG02647.hp2 others(3): Show HG02258.hp2 HG02572.hp2 HG02647.hp2 HG02886.hp2 HG03041.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.1461A>G c.1461A>G	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1461		chr3	42595970
chr3:42596005	T T	C C	3	a0001c0001t0004 a0001c0001t0006 a0001c0001t0017 a0001c0001t0004 a0001c0001t0006 a0001c0001t0017	34	HG00280.hp2 HG00558.hp1 HG00597.hp2 others(31): Show HG00280.hp2 HG00558.hp1 HG00597.hp2 HG00639.hp2 HG00673.hp1 HG01106.hp2 HG02027.hp1 HG02257.hp1 HG02300.hp2 HG03139.hp2 HG03453.hp1 HG03516.hp2 HG03654.hp1 HG03704.hp1 NA18906.hp1 NA18941.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18978.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp1 NA19011.hp1 NA19057.hp2 NA19062.hp1 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19090.hp2	3_prime_UTR_variant	MODIFIER	c.1496T>C c.1496T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1496		chr3	42596005
chr3:42596007	T T	G G	1	a0001c0001t0018 a0001c0001t0018	1	NA19072.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.1498T>G c.1498T>G	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1498		chr3	42596007
chr3:42596013	T T	G G	1	a0001c0001t0019 a0001c0001t0019	1	NA19089.hp2 NA19089.hp2	3_prime_UTR_variant	MODIFIER	c.1504T>G c.1504T>G	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1504		chr3	42596013
chr3:42596018	T T	C C	1	a0001c0001t0022 a0001c0001t0022	1	HG02080.hp2 HG02080.hp2	3_prime_UTR_variant	MODIFIER	c.1509T>C c.1509T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1509		chr3	42596018
chr3:42596053	C C	T T	1	a0001c0001t0012 a0001c0001t0012	2	HG01243.hp1 HG03471.hp2 HG01243.hp1 HG03471.hp2	3_prime_UTR_variant	MODIFIER	c.1544C>T c.1544C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1544		chr3	42596053
chr3:42596054	G G	A A	1	a0001c0001t0009 a0001c0001t0009	5	HG02055.hp1 HG02559.hp2 HG02896.hp2 others(2): Show HG02055.hp1 HG02559.hp2 HG02896.hp2 HG02897.hp1 HG03209.hp2	3_prime_UTR_variant	MODIFIER	c.1545G>A c.1545G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1545		chr3	42596054
chr3:42596126	A A	T T	1	a0001c0001t0006 a0001c0001t0006	6	HG00280.hp2 HG01106.hp2 HG03704.hp1 others(3): Show HG00280.hp2 HG01106.hp2 HG03704.hp1 NA18941.hp2 NA18954.hp1 NA18963.hp2	3_prime_UTR_variant	MODIFIER	c.1617A>T c.1617A>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1617		chr3	42596126
chr3:42596172	G G	C C	19	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(16): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0002t0005	204	HG00140.hp2 HG00280.hp2 HG00423.hp2 others(201): Show HG00140.hp2 HG00280.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19072.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.1663G>C c.1663G>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1663		chr3	42596172
chr3:42596249	C C	T T	1	a0001c0001t0020 a0001c0001t0020	1	HG03130.hp1 HG03130.hp1	3_prime_UTR_variant	MODIFIER	c.1740C>T c.1740C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1740		chr3	42596249
chr3:42596429	C C	A A	1	a0001c0001t0013 a0001c0001t0013	2	HG02723.hp2 HG03579.hp1 HG02723.hp2 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.1920C>A c.1920C>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1920		chr3	42596429
chr3:42596508	A A	C C	1	a0001c0001t0014 a0001c0001t0014	2	HG00408.hp2 NA18943.hp1 HG00408.hp2 NA18943.hp1	3_prime_UTR_variant	MODIFIER	c.1999A>C c.1999A>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	1999		chr3	42596508
chr3:42596571	G G	A A	1	a0001c0001t0018 a0001c0001t0018	1	NA19072.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.2062G>A c.2062G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	2062		chr3	42596571
chr3:42596737	T T	TAGAAAGG others(369): Show TAGAAAGGAGATATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCA GCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGAC CATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAA ATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGC TGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCG AGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA	1	a0001c0001t0017 a0001c0001t0017	1	NA19057.hp2 NA19057.hp2	3_prime_UTR_variant	MODIFIER	c.2244_2245insGGCC others(372): Show c.2244_2245insGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAG CACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACC ATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAA TTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCT GAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGA GATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGGAGATATTTT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	2245	INFO_REALIGN_3_PRIME	chr3	42596737
chr3:42596769	C C	T T	4	a0001c0001t0002 a0001c0001t0010 a0001c0001t0016 others(1): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0016 a0001c0001t0022	89	HG00140.hp2 HG00423.hp2 HG00544.hp1 others(86): Show HG00140.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01123.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01496.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp2 HG02155.hp1 HG02293.hp1 HG02486.hp2 HG02523.hp2 HG02615.hp1 HG02738.hp2 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03688.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18952.hp2 NA18954.hp2 NA18957.hp1 NA18961.hp2 NA18965.hp1 NA18967.hp2 NA18971.hp1 NA18972.hp2 NA18975.hp2 NA18978.hp2 NA18980.hp2 NA18982.hp2 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19055.hp2 NA19056.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19074.hp2 NA19076.hp1 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19090.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.2260C>T c.2260C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	3/3	2260		chr3	42596769

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr3:42590978	C C	G G	2	a0001c0001t0005g0016 a0001c0001t0021g0016 a0001c0001t0005g0016 a0001c0001t0021g0016	4	HG01074.hp2 HG02970.hp1 HG03130.hp2 others(1): Show HG01074.hp2 HG02970.hp1 HG03130.hp2 HG03195.hp2	intron_variant	MODIFIER	c.69+12C>G c.69+12C>G	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42590978
chr3:42591038	G G	C C	1	a0001c0001t0003g0023 a0001c0001t0003g0023	1	HG02965.hp1 HG02965.hp1	intron_variant	MODIFIER	c.69+72G>C c.69+72G>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591038
chr3:42591173	A A	ACGTCACA others(1): Show ACGTCACAC	1	a0001c0001t0003g0008 a0001c0001t0003g0008	6	HG01346.hp2 HG02451.hp1 HG03239.hp1 others(3): Show HG01346.hp2 HG02451.hp1 HG03239.hp1 HG03490.hp1 HG03492.hp2 HG03688.hp2	intron_variant	MODIFIER	c.69+208_69+215dupCG others(6): Show c.69+208_69+215dupCGTCACAC	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chr3	42591173
chr3:42591200	C C	T T	1	a0001c0001t0011g0021 a0001c0001t0011g0021	3	NA18969.hp1 NA19076.hp2 NA19080.hp2 NA18969.hp1 NA19076.hp2 NA19080.hp2	intron_variant	MODIFIER	c.69+234C>T c.69+234C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591200
chr3:42591201	C C	CT CT	3	a0001c0001t0001g0007 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0007 a0001c0001t0001g0018 a0001c0001t0001g0019	16	HG00738.hp2 HG01243.hp2 HG01361.hp1 others(13): Show HG00738.hp2 HG01243.hp2 HG01361.hp1 HG01361.hp2 HG02056.hp2 HG02258.hp1 HG02451.hp2 HG02486.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG06807.hp1 NA18522.hp2	intron_variant	MODIFIER	c.69+251dupT c.69+251dupT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chr3	42591201
chr3:42591201	C C	CTTTTT CTTTTT	16	a0001c0001t0002g0011 a0001c0001t0003g0005 a0001c0001t0003g0008 others(13): Show a0001c0001t0002g0011 a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0023 a0001c0001t0003g0031 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0006g0006 a0001c0001t0012g0011 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005	70	HG00280.hp2 HG00558.hp1 HG00639.hp2 others(67): Show HG00280.hp2 HG00558.hp1 HG00639.hp2 HG00673.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01346.hp2 HG01891.hp2 HG01934.hp1 HG02027.hp1 HG02257.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp1 HG03688.hp2 NA18906.hp1 NA18941.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18978.hp1 NA18982.hp1 NA18983.hp2 NA18985.hp1 NA18995.hp2 NA19011.hp1 NA19043.hp2 NA19057.hp2 NA19062.hp1 NA19072.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19089.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.69+247_69+251dupTT others(3): Show c.69+247_69+251dupTTTTT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chr3	42591201
chr3:42591201	C C	CTTTTTT CTTTTTT	17	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0036 others(14): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0003g0002 a0001c0001t0003g0020 a0001c0001t0004g0034 a0001c0001t0005g0002 a0001c0001t0005g0016 a0001c0001t0006g0035 a0001c0001t0007g0002 a0001c0001t0009g0002 a0001c0001t0009g0032 a0001c0001t0010g0002 a0001c0001t0016g0002 a0001c0001t0021g0016 a0001c0001t0022g0002 a0001c0002t0005g0002	96	HG00140.hp2 HG00423.hp2 HG00544.hp1 others(93): Show HG00140.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01123.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02155.hp1 HG02258.hp2 HG02293.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp2 HG03195.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18952.hp2 NA18954.hp2 NA18961.hp2 NA18965.hp1 NA18967.hp2 NA18971.hp1 NA18972.hp2 NA18978.hp2 NA18980.hp2 NA18982.hp2 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA19003.hp1 NA19055.hp2 NA19056.hp1 NA19062.hp2 NA19065.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19240.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp2	intron_variant	MODIFIER	c.69+246_69+251dupTT others(4): Show c.69+246_69+251dupTTTTTT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chr3	42591201
chr3:42591201	C C	CTTTTTTT CTTTTTTT	8	a0001c0001t0002g0004 a0001c0001t0002g0038 a0001c0001t0003g0015 others(5): Show a0001c0001t0002g0004 a0001c0001t0002g0038 a0001c0001t0003g0015 a0001c0001t0004g0037 a0001c0001t0005g0004 a0001c0001t0007g0004 a0001c0001t0009g0004 a0001c0001t0013g0004	25	HG00621.hp1 HG02055.hp1 HG02109.hp2 others(22): Show HG00621.hp1 HG02055.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02615.hp1 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02886.hp1 HG03209.hp2 HG03225.hp2 HG03579.hp1 HG03831.hp2 NA18957.hp1 NA18994.hp1 NA18997.hp2 NA19005.hp2 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19076.hp1 NA19082.hp2 NA19090.hp1 NA20905.hp2	intron_variant	MODIFIER	c.69+245_69+251dupTT others(5): Show c.69+245_69+251dupTTTTTTT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chr3	42591201
chr3:42591201	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	1	a0001c0001t0003g0039 a0001c0001t0003g0039	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.69+242_69+251dupTT others(8): Show c.69+242_69+251dupTTTTTTTTTT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chr3	42591201
chr3:42591201	C C	T T	1	a0001c0001t0011g0021 a0001c0001t0011g0021	3	NA18969.hp1 NA19076.hp2 NA19080.hp2 NA18969.hp1 NA19076.hp2 NA19080.hp2	intron_variant	MODIFIER	c.69+235C>T c.69+235C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591201
chr3:42591229	C C	T T	1	a0001c0001t0003g0031 a0001c0001t0003g0031	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.69+263C>T c.69+263C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591229
chr3:42591405	G G	A A	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	HG02004.hp2 HG02004.hp2	intron_variant	MODIFIER	c.70-120G>A c.70-120G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591405
chr3:42591457	G G	C C	2	a0001c0001t0003g0025 a0001c0001t0003g0039 a0001c0001t0003g0025 a0001c0001t0003g0039	2	HG02809.hp1 NA18906.hp2 HG02809.hp1 NA18906.hp2	intron_variant	MODIFIER	c.70-68G>C c.70-68G>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591457
chr3:42591461	G G	A A	3	a0001c0001t0003g0010 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0010 a0001c0001t0003g0022 a0001c0001t0003g0023	8	HG01192.hp2 HG01934.hp1 HG02895.hp1 others(5): Show HG01192.hp2 HG01934.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1	intron_variant	MODIFIER	c.70-64G>A c.70-64G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	1/2		chr3	42591461
chr3:42591780	G G	T T	2	a0001c0001t0003g0020 a0001c0001t0003g0029 a0001c0001t0003g0020 a0001c0001t0003g0029	4	HG02572.hp1 HG02647.hp1 HG03540.hp2 others(1): Show HG02572.hp1 HG02647.hp1 HG03540.hp2 HG03579.hp2	intron_variant	MODIFIER	c.146+179G>T c.146+179G>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42591780
chr3:42591830	C C	T T	1	a0001c0001t0001g0013 a0001c0001t0001g0013	4	HG02683.hp1 HG02698.hp1 HG02738.hp1 others(1): Show HG02683.hp1 HG02698.hp1 HG02738.hp1 HG03490.hp2	intron_variant	MODIFIER	c.146+229C>T c.146+229C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42591830
chr3:42591863	G G	A A	1	a0001c0001t0003g0014 a0001c0001t0003g0014	4	HG01891.hp2 HG02723.hp1 HG03195.hp1 others(1): Show HG01891.hp2 HG02723.hp1 HG03195.hp1 NA20300.hp1	intron_variant	MODIFIER	c.146+262G>A c.146+262G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42591863
chr3:42591950	C C	T T	3	a0001c0001t0003g0010 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0010 a0001c0001t0003g0022 a0001c0001t0003g0023	8	HG01192.hp2 HG01934.hp1 HG02895.hp1 others(5): Show HG01192.hp2 HG01934.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1	intron_variant	MODIFIER	c.146+349C>T c.146+349C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42591950
chr3:42591961	CT CT	C C	1	a0001c0001t0001g0012 a0001c0001t0001g0012	4	HG00544.hp2 NA18975.hp1 NA19055.hp1 others(1): Show HG00544.hp2 NA18975.hp1 NA19055.hp1 NA19075.hp2	intron_variant	MODIFIER	c.146+363delT c.146+363delT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2	INFO_REALIGN_3_PRIME	chr3	42591961
chr3:42592006	T T	C C	44	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0009 others(41): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0009 a0001c0001t0002g0011 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0020 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0029 a0001c0001t0003g0031 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0005g0002 a0001c0001t0005g0004 a0001c0001t0005g0016 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0007g0002 a0001c0001t0007g0004 a0001c0001t0009g0002 a0001c0001t0009g0004 a0001c0001t0009g0032 a0001c0001t0010g0002 a0001c0001t0011g0021 a0001c0001t0012g0011 a0001c0001t0013g0004 a0001c0001t0016g0002 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005 a0001c0001t0021g0016 a0001c0001t0022g0002 a0001c0002t0005g0002	198	HG00140.hp2 HG00280.hp2 HG00423.hp2 others(195): Show HG00140.hp2 HG00280.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19072.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.146+405T>C c.146+405T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592006
chr3:42592185	C C	T T	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG01123.hp2 HG01123.hp2	intron_variant	MODIFIER	c.146+584C>T c.146+584C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592185
chr3:42592203	C C	A A	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.146+602C>A c.146+602C>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592203
chr3:42592311	G G	A A	2	a0001c0001t0001g0017 a0001c0001t0001g0026 a0001c0001t0001g0017 a0001c0001t0001g0026	4	HG00099.hp2 HG01256.hp1 HG01433.hp1 others(1): Show HG00099.hp2 HG01256.hp1 HG01433.hp1 HG02109.hp1	intron_variant	MODIFIER	c.146+710G>A c.146+710G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592311
chr3:42592356	C C	T T	2	a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0002g0036 a0001c0001t0002g0038	2	HG02083.hp1 NA19063.hp2 HG02083.hp1 NA19063.hp2	intron_variant	MODIFIER	c.146+755C>T c.146+755C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592356
chr3:42592457	C C	T T	10	a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 others(7): Show a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003	36	HG00280.hp2 HG00558.hp1 HG00597.hp2 others(33): Show HG00280.hp2 HG00558.hp1 HG00597.hp2 HG00639.hp2 HG00673.hp1 HG01106.hp2 HG02027.hp1 HG02257.hp1 HG02300.hp2 HG03139.hp2 HG03453.hp1 HG03516.hp2 HG03654.hp1 HG03704.hp1 NA18906.hp1 NA18941.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18978.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp1 NA19011.hp1 NA19057.hp2 NA19062.hp1 NA19072.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19089.hp2 NA19090.hp2	intron_variant	MODIFIER	c.146+856C>T c.146+856C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592457
chr3:42592690	T T	C C	1	a0001c0001t0004g0030 a0001c0001t0004g0030	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.146+1089T>C c.146+1089T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592690
chr3:42592691	G G	A A	19	a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 others(16): Show a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0031 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0011g0021 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005	73	HG00280.hp2 HG00558.hp1 HG00597.hp2 others(70): Show HG00280.hp2 HG00558.hp1 HG00597.hp2 HG00639.hp2 HG00673.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01346.hp2 HG01891.hp2 HG01934.hp1 HG02027.hp1 HG02257.hp1 HG02300.hp2 HG02451.hp1 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03688.hp2 HG03704.hp1 NA18906.hp1 NA18941.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18969.hp1 NA18971.hp2 NA18978.hp1 NA18982.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp1 NA19011.hp1 NA19043.hp2 NA19057.hp2 NA19062.hp1 NA19072.hp2 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19083.hp1 NA19089.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.146+1090G>A c.146+1090G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42592691
chr3:42592910	TCC TCC	T T	2	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0018 a0001c0001t0001g0019	6	HG01243.hp2 HG02486.hp1 HG03209.hp1 others(3): Show HG01243.hp2 HG02486.hp1 HG03209.hp1 HG03225.hp1 HG06807.hp1 NA18522.hp2	intron_variant	MODIFIER	c.146+1311_146+1312d others(4): Show c.146+1311_146+1312delCC	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2	INFO_REALIGN_3_PRIME	chr3	42592910
chr3:42593052	A A	G G	18	a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 others(15): Show a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0031 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005	70	HG00280.hp2 HG00558.hp1 HG00597.hp2 others(67): Show HG00280.hp2 HG00558.hp1 HG00597.hp2 HG00639.hp2 HG00673.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01346.hp2 HG01891.hp2 HG01934.hp1 HG02027.hp1 HG02257.hp1 HG02300.hp2 HG02451.hp1 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03688.hp2 HG03704.hp1 NA18906.hp1 NA18941.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18978.hp1 NA18982.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp1 NA19011.hp1 NA19043.hp2 NA19057.hp2 NA19062.hp1 NA19072.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19089.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.147-1370A>G c.147-1370A>G	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593052
chr3:42593332	G G	C C	1	a0001c0001t0001g0018 a0001c0001t0001g0018	3	HG01243.hp2 HG02486.hp1 NA18522.hp2 HG01243.hp2 HG02486.hp1 NA18522.hp2	intron_variant	MODIFIER	c.147-1090G>C c.147-1090G>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593332
chr3:42593336	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	3	HG01243.hp2 HG02486.hp1 NA18522.hp2 HG01243.hp2 HG02486.hp1 NA18522.hp2	intron_variant	MODIFIER	c.147-1086G>A c.147-1086G>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593336
chr3:42593815	T T	C C	4	a0001c0001t0004g0003 a0001c0001t0004g0034 a0001c0001t0017g0003 others(1): Show a0001c0001t0004g0003 a0001c0001t0004g0034 a0001c0001t0017g0003 a0001c0001t0019g0003	20	HG00558.hp1 HG00597.hp2 HG00673.hp1 others(17): Show HG00558.hp1 HG00597.hp2 HG00673.hp1 HG02300.hp2 NA18960.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18978.hp1 NA18983.hp2 NA18985.hp1 NA19011.hp1 NA19057.hp2 NA19062.hp1 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19089.hp2 NA19090.hp2	intron_variant	MODIFIER	c.147-607T>C c.147-607T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593815
chr3:42593887	A A	C C	1	a0001c0001t0002g0033 a0001c0001t0002g0033	1	NA18978.hp2 NA18978.hp2	intron_variant	MODIFIER	c.147-535A>C c.147-535A>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593887
chr3:42593892	C C	T T	47	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0009 others(44): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0009 a0001c0001t0002g0011 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0015 a0001c0001t0003g0020 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0029 a0001c0001t0003g0031 a0001c0001t0003g0039 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0005g0002 a0001c0001t0005g0004 a0001c0001t0005g0016 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0007g0002 a0001c0001t0007g0004 a0001c0001t0009g0002 a0001c0001t0009g0004 a0001c0001t0009g0032 a0001c0001t0010g0002 a0001c0001t0011g0021 a0001c0001t0012g0011 a0001c0001t0013g0004 a0001c0001t0016g0002 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005 a0001c0001t0021g0016 a0001c0001t0022g0002 a0001c0002t0005g0002	204	HG00140.hp2 HG00280.hp2 HG00423.hp2 others(201): Show HG00140.hp2 HG00280.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19072.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.147-530C>T c.147-530C>T	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593892
chr3:42593975	T T	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.147-447T>A c.147-447T>A	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42593975
chr3:42594053	C C	CT CT	18	a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 others(15): Show a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0031 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005	70	HG00280.hp2 HG00558.hp1 HG00597.hp2 others(67): Show HG00280.hp2 HG00558.hp1 HG00597.hp2 HG00639.hp2 HG00673.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01346.hp2 HG01891.hp2 HG01934.hp1 HG02027.hp1 HG02257.hp1 HG02300.hp2 HG02451.hp1 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03688.hp2 HG03704.hp1 NA18906.hp1 NA18941.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18978.hp1 NA18982.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp1 NA19011.hp1 NA19043.hp2 NA19057.hp2 NA19062.hp1 NA19072.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19089.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.147-369_147-368ins others(1): Show c.147-369_147-368insT	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42594053
chr3:42594140	T T	C C	1	a0001c0001t0009g0032 a0001c0001t0009g0032	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.147-282T>C c.147-282T>C	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42594140
chr3:42594141	A A	G G	44	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0009 others(41): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0009 a0001c0001t0002g0011 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0014 a0001c0001t0003g0020 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0029 a0001c0001t0003g0031 a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0030 a0001c0001t0004g0034 a0001c0001t0004g0037 a0001c0001t0005g0002 a0001c0001t0005g0004 a0001c0001t0005g0016 a0001c0001t0006g0006 a0001c0001t0006g0035 a0001c0001t0007g0002 a0001c0001t0007g0004 a0001c0001t0009g0002 a0001c0001t0009g0004 a0001c0001t0009g0032 a0001c0001t0010g0002 a0001c0001t0011g0021 a0001c0001t0012g0011 a0001c0001t0013g0004 a0001c0001t0016g0002 a0001c0001t0017g0003 a0001c0001t0018g0006 a0001c0001t0019g0003 a0001c0001t0020g0005 a0001c0001t0021g0016 a0001c0001t0022g0002 a0001c0002t0005g0002	198	HG00140.hp2 HG00280.hp2 HG00423.hp2 others(195): Show HG00140.hp2 HG00280.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19072.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.147-281A>G c.147-281A>G	SS18L2	ENSG00000008324.12	transcript	ENST00000011691.6	protein_coding	2/2		chr3	42594141

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🧬 JoGo Online Haplotype Explorer SS18L2_chr3_42585860_42601934

JoGo Local Haplotype Explorer (on iGV) SS18L2_chr3_42585860_42601934

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 2)

TTranscript Level Haplotype Info (Total: 22)

GGenebody Level Haplotype Info (Total: 39)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 2)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 23)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 61)

Haplotype Details by Sample (Haploid Level) (Total: 388)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 23)

GGenebody Level Haplotype Variants (Intron) (Total: 38)

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Annotation (Repeats)

Annotation (SNP Array)