Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	112488745
ensemblid	ENSG00000283988.1
hgncid	53852
symbol	TAF11L9
name	TATA-box binding protein associated factor 11 like 9
refseq_nuc	NM_001401693.1
refseq_prot	NP_001388622.1
ensembl_nuc	ENST00000639969.1
ensembl_prot	ENSP00000492463.1
mane_status	MANE Select
chr	chr5
start	17593798
end	17594394
strand	-
ver	v1.2
region	chr5:17593798-17594394
region5000	chr5:17588798-17599394
regionname0	TAF11L9_chr5_17593798_17594394
regionname5000	TAF11L9_chr5_17588798_17599394

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	198	107	16	17	64	10	49	TAF11L9_chr5_17588798_17599394	TAF11L9	METGR others(193): Show METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSED VMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSA MSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFV GEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF	chr5	17588798	17599394
a0002	0/0	198	2	2	0	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	METGR others(193): Show METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSED VMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSA MSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFV GEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCRRIMF	chr5	17588798	17599394
a0003	0/0	198	2	0	1	1	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	METGR others(193): Show METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSED VMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQKMTTLLSA MSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFV GEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF	chr5	17588798	17599394
a0004	0/0	198	1	0	0	1	0	1	TAF11L9_chr5_17588798_17599394	TAF11L9	METGR others(193): Show METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSED VMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSA MSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENTAIAMAGIAKLFV GEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF	chr5	17588798	17599394

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	594	105	14	17	64	10	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(589): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTC	chr5	17588798	17599394
a0001c0004	0/0	594	1	1	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(589): Show ATGGAGACCGGCAGGCAAACAGGCGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTC	chr5	17588798	17599394
a0001c0006	0/0	594	1	1	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(589): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCTGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTC	chr5	17588798	17599394
a0002c0003	0/0	594	2	2	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(589): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAGAAGAATCATGTTC	chr5	17588798	17599394
a0003c0002	0/0	594	2	0	1	1	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(589): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCCCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAAGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTC	chr5	17588798	17599394
a0004c0005	0/0	594	1	0	0	1	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(589): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACACGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTC	chr5	17588798	17599394

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	597	105	14	17	64	10	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(592): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTCTAG	chr5	17588798	17599394
a0001c0004t0001	0/0	597	1	1	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(592): Show ATGGAGACCGGCAGGCAAACAGGCGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTCTAG	chr5	17588798	17599394
a0001c0006t0001	0/0	597	1	1	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(592): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCTGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTCTAG	chr5	17588798	17599394
a0002c0003t0001	0/0	597	2	2	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(592): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAGAAGAATCATGTTCTAG	chr5	17588798	17599394
a0003c0002t0001	0/0	597	2	0	1	1	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(592): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCCCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAAGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTCTAG	chr5	17588798	17599394
a0004c0005t0001	0/0	597	1	0	0	1	0	TAF11L9_chr5_17588798_17599394	TAF11L9	ATGGA others(592): Show ATGGAGACCGGCAGGCAAACAGGTGTGTCTGCTGAGATGCTCGCCATGCC CCGAGGTCTGAAGGGCAGCAAGAAGGATGGAATCCCTGAGGACCTAGACG GGAACTTGGAAGCACCCAGGGATCAGGAAGGTGAGCTCAGGAGTGAGGAT GTCATGGACCTCACAGAAGGTGACAGTGAGGCCTCAGCCTCAGCTCCTCC TGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGC CCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACCCTGCTGTCTGCC ATGTCTGAGGAGCAGCTGTCCCGCTACGAAGTGTGTCGCCGGTCAGCGTT CCCGAGAGCACGCGTTGCGGGTCTGATGCGGGCTATCACTGGCAGTTCGG TGTCGGAGAACACGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTT GGAGAGGTGGTGGAAGAGGCCCTGGACGTGTGTGAGATGTGGGGAGAGAC GCCCCCGCTGCAGCCCAAGCATTTAAGGGAGGCCGTTCGCAGGTTAAAGC CCAAGGGCCTCTTCCCCAACAGCAACTGCAAAAGAATCATGTTCTAG	chr5	17588798	17599394

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	0/0	105	14	17	64	10	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
a0001c0004t0001g0000	0/0	1	1	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
a0001c0006t0001g0000	0/0	1	1	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
a0002c0003t0001g0000	0/0	2	2	0	0	0	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
a0003c0002t0001g0000	0/0	2	0	1	1	0	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
a0004c0005t0001g0000	0/0	1	0	0	1	0	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00408	hp1	a0001	c0001	t0001	g0000	EAS	CHS	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00408	hp2	a0001	c0001	t0001	g0000	EAS	CHS	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00438	hp1	a0001	c0001	t0001	g0000	EAS	CHS	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00438	hp2	a0001	c0001	t0001	g0000	EAS	CHS	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00609	hp1	a0001	c0001	t0001	g0000	EAS	CHS	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00609	hp2	a0003	c0002	t0001	g0000	EAS	CHS	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00735	hp1	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG00735	hp2	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01071	hp1	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01071	hp2	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01109	hp1	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01109	hp2	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01167	hp1	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01167	hp2	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01192	hp1	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01192	hp2	a0001	c0001	t0001	g0000	AMR	PUR	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01257	hp1	a0001	c0001	t0001	g0000	AMR	CLM	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01257	hp2	a0003	c0002	t0001	g0000	AMR	CLM	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01978	hp1	a0001	c0001	t0001	g0000	AMR	PEL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01978	hp2	a0001	c0001	t0001	g0000	AMR	PEL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01981	hp1	a0001	c0001	t0001	g0000	AMR	PEL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG01981	hp2	a0001	c0001	t0001	g0000	AMR	PEL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02004	hp1	a0001	c0001	t0001	g0000	AMR	PEL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02004	hp2	a0001	c0001	t0001	g0000	AMR	PEL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02080	hp1	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02080	hp2	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02083	hp1	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02083	hp2	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02132	hp1	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02132	hp2	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02523	hp1	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02523	hp2	a0001	c0001	t0001	g0000	EAS	KHV	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02622	hp1	a0001	c0001	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02622	hp2	a0001	c0001	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02630	hp1	a0001	c0001	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02630	hp2	a0001	c0001	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02647	hp1	a0001	c0004	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02647	hp2	a0002	c0003	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02683	hp1	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02683	hp2	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02897	hp1	a0001	c0001	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02897	hp2	a0001	c0001	t0001	g0000	AFR	GWD	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02922	hp1	a0001	c0001	t0001	g0000	AFR	ESN	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02922	hp2	a0001	c0001	t0001	g0000	AFR	ESN	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02965	hp1	a0002	c0003	t0001	g0000	AFR	ESN	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG02965	hp2	a0001	c0001	t0001	g0000	AFR	ESN	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03017	hp1	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03017	hp2	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03098	hp1	a0001	c0001	t0001	g0000	AFR	MSL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03098	hp2	a0001	c0001	t0001	g0000	AFR	MSL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03491	hp1	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03491	hp2	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03579	hp1	a0001	c0001	t0001	g0000	AFR	MSL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03579	hp2	a0001	c0001	t0001	g0000	AFR	MSL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03710	hp1	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG03710	hp2	a0001	c0001	t0001	g0000	SAS	PJL	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG04228	hp1	a0001	c0001	t0001	g0000	SAS	STU	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
HG04228	hp2	a0001	c0001	t0001	g0000	SAS	STU	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18747	hp1	a0001	c0001	t0001	g0000	EAS	CHB	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18747	hp2	a0001	c0001	t0001	g0000	EAS	CHB	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18939	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18939	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18940	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18940	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18945	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18945	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18948	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18948	hp2	a0004	c0005	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18951	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18951	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18969	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18969	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18970	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18970	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18974	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18974	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18977	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18977	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18978	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18978	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18981	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA18981	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19000	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19000	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19002	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19002	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19009	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19009	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19043	hp1	a0001	c0001	t0001	g0000	AFR	LWK	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19043	hp2	a0001	c0006	t0001	g0000	AFR	LWK	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19054	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19054	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19057	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19057	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19065	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19065	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19068	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19068	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19074	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19074	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19075	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19075	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19081	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19081	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19083	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19083	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19084	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19084	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19087	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19087	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19091	hp1	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394
NA19091	hp2	a0001	c0001	t0001	g0000	EAS	JPT	TAF11L9_chr5_17588798_17599394	TAF11L9	chr5	17588798	17599394

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr5:17593814	C C	T T	3	a0001 a0003 a0004 a0001 a0003 a0004	110	HG00408.hp1 HG00408.hp2 HG00438.hp1 others(107): Show HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00609.hp2 HG00735.hp1 HG00735.hp2 HG01071.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01192.hp1 HG01192.hp2 HG01257.hp1 HG01257.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02523.hp1 HG02523.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03491.hp1 HG03491.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG03710.hp2 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18981.hp1 NA18981.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19009.hp1 NA19009.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19057.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp1 NA19091.hp2	missense_variant	MODERATE	c.581G>A c.581G>A	p.Arg194Lys p.Arg194Lys	TAF11L9	ENSG00000283988.1	transcript	ENST00000639969.1	protein_coding	1/1	581/597	581/597	194/198	chr5	17593814
chr5:17593983	C C	T T	1	a0004 a0004	1	NA18948.hp2 NA18948.hp2	missense_variant	MODERATE	c.412G>A c.412G>A	p.Ala138Thr p.Ala138Thr	TAF11L9	ENSG00000283988.1	transcript	ENST00000639969.1	protein_coding	1/1	412/597	412/597	138/198	chr5	17593983
chr5:17594117	C C	T T	1	a0003 a0003	2	HG00609.hp2 HG01257.hp2 HG00609.hp2 HG01257.hp2	missense_variant	MODERATE	c.278G>A c.278G>A	p.Arg93Lys p.Arg93Lys	TAF11L9	ENSG00000283988.1	transcript	ENST00000639969.1	protein_coding	1/1	278/597	278/597	93/198	chr5	17594117

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr5:17593990	C C	A A	1	a0001c0006 a0001c0006	1	NA19043.hp2 NA19043.hp2	synonymous_variant	LOW	c.405G>T c.405G>T	p.Ser135Ser p.Ser135Ser	TAF11L9	ENSG00000283988.1	transcript	ENST00000639969.1	protein_coding	1/1	405/597	405/597	135/198	chr5	17593990
chr5:17594200	A A	G G	1	a0003c0002 a0003c0002	2	HG00609.hp2 HG01257.hp2 HG00609.hp2 HG01257.hp2	synonymous_variant	LOW	c.195T>C c.195T>C	p.Ala65Ala p.Ala65Ala	TAF11L9	ENSG00000283988.1	transcript	ENST00000639969.1	protein_coding	1/1	195/597	195/597	65/198	chr5	17594200
chr5:17594371	A A	G G	1	a0001c0004 a0001c0004	1	HG02647.hp1 HG02647.hp1	synonymous_variant	LOW	c.24T>C c.24T>C	p.Gly8Gly p.Gly8Gly	TAF11L9	ENSG00000283988.1	transcript	ENST00000639969.1	protein_coding	1/1	24/597	24/597	8/198	chr5	17594371

view	chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

view	chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

Search by Genic region

Search

JoGo Haplotype Explorer

TAF11L9_chr5_17588798_17599394 Genic Haplotype Structure on iGV

Translation Multiple Alignment View

Gene Summary (with MANE)

Amino acid(protein) Level Haplotype Info (Total: 4)

Coding Level Haplotype Info (Total: 6)

Transcript Level Haplotype Info (Total: 6)

Genebody Level Haplotype Info (Total: 6)

Haplotype Details by Sample (Haploid Level) (Total: 112)

Amino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 3)

Coding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 3)

Transcript Level Haplotype Variants (Exon) (Total: 0)

Genebody Level Haplotype Variants (Intron) (Total: 0)

Annotation (Repeats)

Annotation (SNP Array)