JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	140597
ensemblid	ENSG00000184905.9
hgncid	29818
symbol	TCEAL2
name	transcription elongation factor A like 2
refseq_nuc	NM_080390.4
refseq_prot	NP_525129.1
ensembl_nuc	ENST00000372780.6
ensembl_prot	ENSP00000361866.1
mane_status	MANE Select
chr	chrX
start	102125679
end	102127712
strand	+
ver	v1.2
region	chrX:102125679-102127712
region5000	chrX:102120679-102132712
regionname0	TCEAL2_chrX_102125679_102127712
regionname5000	TCEAL2_chrX_102120679_102132712

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	227	278	61	45	135	8	27	112	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002	0/0	227	27	13	8	0	5	1	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0003	0/0	227	4	4	0	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	684	275	60	45	135	8	25	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0002	0/0	684	14	1	8	0	4	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0003	0/0	684	13	12	0	0	1	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0004	0/0	684	3	3	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0005	0/0	684	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0006	0/0	684	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0007	0/0	684	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
c0008	0/0	684	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	427	286	69	46	135	9	25	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
t0002	0/0	427	11	0	4	0	4	3	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
t0003	0/0	427	8	8	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
t0004	0/0	427	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
t0005	0/0	427	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
t0006	0/0	427	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
t0007	0/0	428	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	269	70	42	117	12	26	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0002	0/0	15	0	0	12	1	2	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0003	0/0	7	0	6	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0004	0/0	5	4	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0005	0/0	5	0	5	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0006	0/0	3	3	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0007	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0008	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0009	0/0	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0010	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
g0011	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	684	275	60	45	135	8	25	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0005	0/0	684	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0006	0/0	684	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0007	0/0	684	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002c0002	0/0	684	14	1	8	0	4	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002c0003	0/0	684	13	12	0	0	1	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0003c0004	0/0	684	3	3	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0003c0008	0/0	684	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1110	254	51	40	135	4	22	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0001t0002	0/0	1110	11	0	4	0	4	3	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0001t0003	0/0	1110	8	8	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0001t0004	0/0	1110	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0001t0006	0/0	1110	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0005t0001	0/0	1110	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0006t0001	0/0	1110	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0001c0007t0001	0/0	1110	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002c0002t0001	0/0	1110	12	1	6	0	4	1	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002c0002t0005	0/0	1110	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002c0002t0007	0/0	1111	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0002c0003t0001	0/0	1110	13	12	0	0	1	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0003c0004t0001	0/0	1110	3	3	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712
a0003c0008t0001	0/0	1110	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	copy fasta	chrX	102120679	102132712

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	216	44	29	117	3	21	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0002	0/0	14	0	0	12	1	1	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0003	0/0	7	0	6	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0004	0/0	5	4	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0005	0/0	5	0	5	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0006	0/0	3	3	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0007	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0008	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0010	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0001g0011	0/0	1	0	0	1	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0002g0001	0/0	11	0	4	0	4	3	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0003g0001	0/0	7	7	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0003g0009	0/0	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0004g0001	0/0	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0001t0006g0001	0/0	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0005t0001g0001	0/0	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0006t0001g0001	0/0	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0001c0007t0001g0002	0/0	1	0	0	0	0	1	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0002c0002t0001g0001	0/0	12	1	6	0	4	1	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0002c0002t0005g0001	0/0	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0002c0002t0007g0001	0/0	1	0	1	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0002c0003t0001g0001	0/0	13	12	0	0	1	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0003c0004t0001g0001	0/0	3	3	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
a0003c0008t0001g0001	0/0	1	1	0	0	0	0	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00099	hp2	a0001	c0001	t0002	g0001	EUR	GBR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00140	hp1	a0001	c0001	t0002	g0001	EUR	GBR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00280	hp1	a0002	c0002	t0001	g0001	EUR	FIN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00323	hp1	a0001	c0001	t0001	g0002	EUR	FIN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00544	hp2	a0001	c0001	t0001	g0010	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00621	hp1	a0001	c0001	t0001	g0002	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00639	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00642	hp1	a0001	c0001	t0001	g0005	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00673	hp1	a0001	c0001	t0001	g0008	EAS	CHS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG00738	hp1	a0002	c0002	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01070	hp2	a0002	c0002	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01081	hp1	a0002	c0002	t0005	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01081	hp2	a0002	c0002	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01099	hp1	a0001	c0001	t0001	g0005	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01106	hp1	a0002	c0002	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01175	hp1	a0002	c0002	t0007	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01243	hp1	a0001	c0001	t0006	g0001	AMR	PUR	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01256	hp1	a0001	c0001	t0001	g0005	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01257	hp1	a0001	c0001	t0002	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01258	hp1	a0001	c0001	t0002	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01261	hp1	a0001	c0001	t0001	g0003	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01358	hp1	a0001	c0001	t0002	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01496	hp2	a0001	c0001	t0001	g0003	AMR	CLM	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01515	hp1	a0002	c0002	t0001	g0001	EUR	IBS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01516	hp2	a0001	c0001	t0002	g0001	EUR	IBS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01517	hp1	a0002	c0002	t0001	g0001	EUR	IBS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01517	hp2	a0001	c0001	t0002	g0001	EUR	IBS	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01884	hp2	a0001	c0001	t0001	g0006	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01891	hp1	a0001	c0001	t0001	g0004	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01891	hp2	a0001	c0001	t0001	g0004	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01928	hp1	a0001	c0001	t0001	g0003	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01975	hp2	a0001	c0001	t0001	g0003	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01978	hp1	a0001	c0001	t0001	g0005	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01981	hp1	a0002	c0002	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02074	hp1	a0001	c0001	t0001	g0011	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02145	hp1	a0002	c0003	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02148	hp1	a0001	c0001	t0001	g0005	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02293	hp1	a0002	c0002	t0001	g0001	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02293	hp2	a0001	c0001	t0001	g0003	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02300	hp1	a0001	c0001	t0001	g0003	AMR	PEL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02451	hp1	a0001	c0001	t0001	g0004	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02602	hp1	a0001	c0005	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02622	hp1	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02630	hp1	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02723	hp1	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02723	hp2	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02735	hp1	a0001	c0001	t0002	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02738	hp1	a0001	c0001	t0001	g0002	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02809	hp2	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02886	hp1	a0001	c0001	t0004	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02965	hp1	a0003	c0004	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02970	hp2	a0002	c0003	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02976	hp1	a0001	c0006	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02976	hp2	a0001	c0001	t0003	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03017	hp1	a0001	c0001	t0002	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03041	hp1	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03041	hp2	a0002	c0003	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03195	hp1	a0001	c0001	t0003	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03195	hp2	a0003	c0004	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03209	hp1	a0001	c0001	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03453	hp1	a0001	c0001	t0003	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03486	hp2	a0002	c0003	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03490	hp1	a0002	c0002	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03516	hp2	a0001	c0001	t0003	g0009	AFR	ESN	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03540	hp2	a0001	c0001	t0001	g0006	AFR	GWD	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG04115	hp1	a0001	c0007	t0001	g0002	SAS	STU	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG04204	hp1	a0001	c0001	t0002	g0001	SAS	STU	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18747	hp1	a0001	c0001	t0001	g0003	EAS	CHB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18906	hp2	a0001	c0001	t0003	g0001	AFR	YRI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18939	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18941	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18966	hp1	a0001	c0001	t0001	g0007	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18968	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18972	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18975	hp1	a0001	c0001	t0001	g0004	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18993	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18999	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19000	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19004	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19030	hp1	a0001	c0001	t0001	g0004	AFR	LWK	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19065	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19072	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19078	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19080	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19081	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19240	hp1	a0003	c0008	t0001	g0001	AFR	YRI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA19240	hp2	a0002	c0003	t0001	g0001	AFR	YRI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20129	hp1	a0001	c0001	t0003	g0001	AFR	ASW	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20752	hp1	a0002	c0003	t0001	g0001	EUR	TSI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20805	hp1	a0002	c0002	t0001	g0001	EUR	TSI	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02559	hp1	a0001	c0001	t0001	g0006	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG02559	hp2	a0002	c0003	t0001	g0001	AFR	ACB	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG03471	hp1	a0001	c0001	t0003	g0001	AFR	MSL	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
HG06807	hp2	a0003	c0004	t0001	g0001	AFR	USA	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20300	hp1	a0001	c0001	t0003	g0001	AFR	USA	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
NA21309	hp2	a0002	c0002	t0001	g0001	AFR	LWK	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	TCEAL2_chrX_102120679_102132712	TCEAL2	chrX	102120679	102132712

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:102126886	A A	G G	1	a0003 a0003	4	HG02965.hp1 HG03195.hp2 HG06807.hp2 others(1): Show HG02965.hp1 HG03195.hp2 HG06807.hp2 NA19240.hp1	missense_variant	MODERATE	c.56A>G c.56A>G	p.Asp19Gly p.Asp19Gly	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	284/1110	56/684	19/227			chrX	102126886
chrX:102127033	G G	C C	1	a0002 a0002	27	HG00280.hp1 HG00738.hp1 HG01070.hp2 others(24): Show HG00280.hp1 HG00738.hp1 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01175.hp1 HG01515.hp1 HG01517.hp1 HG01981.hp1 HG02145.hp1 HG02293.hp1 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03486.hp2 HG03490.hp1 NA19240.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp2	missense_variant	MODERATE	c.203G>C c.203G>C	p.Gly68Ala p.Gly68Ala	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	431/1110	203/684	68/227			chrX	102127033

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:102127121	G G	C C	1	a0001c0005 a0001c0005	1	HG02602.hp1 HG02602.hp1	synonymous_variant	LOW	c.291G>C c.291G>C	p.Gly97Gly p.Gly97Gly	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	519/1110	291/684	97/227	chrX	102127121
chrX:102127430	C C	T T	1	a0001c0007 a0001c0007	1	HG04115.hp1 HG04115.hp1	synonymous_variant	LOW	c.600C>T c.600C>T	p.Asp200Asp p.Asp200Asp	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	828/1110	600/684	200/227	chrX	102127430
chrX:102127439	T T	C C	3	a0001c0006 a0002c0002 a0003c0004 a0001c0006 a0002c0002 a0003c0004	18	HG00280.hp1 HG00738.hp1 HG01070.hp2 others(15): Show HG00280.hp1 HG00738.hp1 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01175.hp1 HG01515.hp1 HG01517.hp1 HG01981.hp1 HG02293.hp1 HG02965.hp1 HG02976.hp1 HG03195.hp2 HG03490.hp1 HG06807.hp2 NA20805.hp1 NA21309.hp2	synonymous_variant	LOW	c.609T>C c.609T>C	p.Tyr203Tyr p.Tyr203Tyr	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	837/1110	609/684	203/227	chrX	102127439
chrX:102127445	G G	A A	2	a0001c0006 a0002c0002 a0001c0006 a0002c0002	15	HG00280.hp1 HG00738.hp1 HG01070.hp2 others(12): Show HG00280.hp1 HG00738.hp1 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01175.hp1 HG01515.hp1 HG01517.hp1 HG01981.hp1 HG02293.hp1 HG02976.hp1 HG03490.hp1 NA20805.hp1 NA21309.hp2	synonymous_variant	LOW	c.615G>A c.615G>A	p.Arg205Arg p.Arg205Arg	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	843/1110	615/684	205/227	chrX	102127445

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:102125695	G G	C C	1	a0001c0001t0002 a0001c0001t0002	11	HG00099.hp2 HG00140.hp1 HG00639.hp2 others(8): Show HG00099.hp2 HG00140.hp1 HG00639.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp1 HG01516.hp2 HG01517.hp2 HG02735.hp1 HG03017.hp1 HG04204.hp1	5_prime_UTR_variant	MODIFIER	c.-212G>C c.-212G>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/3	1136		chrX	102125695
chrX:102125701	G G	A A	1	a0001c0001t0002 a0001c0001t0002	11	HG00099.hp2 HG00140.hp1 HG00639.hp2 others(8): Show HG00099.hp2 HG00140.hp1 HG00639.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp1 HG01516.hp2 HG01517.hp2 HG02735.hp1 HG03017.hp1 HG04204.hp1	5_prime_UTR_variant	MODIFIER	c.-206G>A c.-206G>A	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/3	1130		chrX	102125701
chrX:102125742	C C	CG CG	1	a0002c0002t0007 a0002c0002t0007	1	HG01175.hp1 HG01175.hp1	5_prime_UTR_variant	MODIFIER	c.-160dupG c.-160dupG	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/3	1083	INFO_REALIGN_3_PRIME	chrX	102125742
chrX:102126422	G G	A A	1	a0001c0001t0003 a0001c0001t0003	8	HG02976.hp2 HG03195.hp1 HG03453.hp1 others(5): Show HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp2 NA18906.hp2 NA20129.hp1 NA20300.hp1	5_prime_UTR_variant	MODIFIER	c.-51G>A c.-51G>A	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	2/3	409		chrX	102126422
chrX:102126436	A A	C C	1	a0001c0001t0006 a0001c0001t0006	1	HG01243.hp1 HG01243.hp1	5_prime_UTR_variant	MODIFIER	c.-37A>C c.-37A>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	2/3	395		chrX	102126436
chrX:102127533	G G	A A	1	a0001c0001t0004 a0001c0001t0004	1	HG02886.hp1 HG02886.hp1	3_prime_UTR_variant	MODIFIER	c.19G>A c.19G>A	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	19		chrX	102127533
chrX:102127534	T T	C C	1	a0001c0001t0004 a0001c0001t0004	1	HG02886.hp1 HG02886.hp1	3_prime_UTR_variant	MODIFIER	c.20T>C c.20T>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	20		chrX	102127534
chrX:102127640	G G	C C	1	a0002c0002t0005 a0002c0002t0005	1	HG01081.hp1 HG01081.hp1	3_prime_UTR_variant	MODIFIER	c.126G>C c.126G>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	3/3	126		chrX	102127640

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:102125904	T T	C C	1	a0001c0001t0001g0003 a0001c0001t0001g0003	7	HG01261.hp1 HG01496.hp2 HG01928.hp1 others(4): Show HG01261.hp1 HG01496.hp2 HG01928.hp1 HG01975.hp2 HG02293.hp2 HG02300.hp1 NA18747.hp1	intron_variant	MODIFIER	c.-101+98T>C c.-101+98T>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102125904
chrX:102125937	G G	T T	1	a0001c0001t0001g0011 a0001c0001t0001g0011	1	HG02074.hp1 HG02074.hp1	intron_variant	MODIFIER	c.-101+131G>T c.-101+131G>T	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102125937
chrX:102126030	T T	TG TG	1	a0001c0001t0001g0007 a0001c0001t0001g0007	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.-101+230dupG c.-101+230dupG	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	102126030
chrX:102126169	G G	C C	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG00673.hp1 HG00673.hp1	intron_variant	MODIFIER	c.-100-204G>C c.-100-204G>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102126169
chrX:102126257	G G	C C	1	a0001c0001t0003g0009 a0001c0001t0003g0009	1	HG03516.hp2 HG03516.hp2	intron_variant	MODIFIER	c.-100-116G>C c.-100-116G>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102126257
chrX:102126277	G G	C C	1	a0001c0001t0001g0004 a0001c0001t0001g0004	5	HG01891.hp1 HG01891.hp2 HG02451.hp1 others(2): Show HG01891.hp1 HG01891.hp2 HG02451.hp1 NA18975.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-100-96G>C c.-100-96G>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102126277
chrX:102126284	A A	G G	1	a0001c0001t0001g0005 a0001c0001t0001g0005	5	HG00642.hp1 HG01099.hp1 HG01256.hp1 others(2): Show HG00642.hp1 HG01099.hp1 HG01256.hp1 HG01978.hp1 HG02148.hp1	intron_variant	MODIFIER	c.-100-89A>G c.-100-89A>G	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102126284
chrX:102126339	G G	T T	2	a0001c0001t0001g0002 a0001c0007t0001g0002 a0001c0001t0001g0002 a0001c0007t0001g0002	15	HG00323.hp1 HG00621.hp1 HG02738.hp1 others(12): Show HG00323.hp1 HG00621.hp1 HG02738.hp1 HG04115.hp1 NA18939.hp1 NA18941.hp2 NA18968.hp2 NA18971.hp1 NA18972.hp2 NA18999.hp2 NA19000.hp1 NA19004.hp1 NA19065.hp2 NA19080.hp1 NA19081.hp2	intron_variant	MODIFIER	c.-100-34G>T c.-100-34G>T	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	1/2		chrX	102126339
chrX:102126541	C C	G G	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	HG00544.hp2 HG00544.hp2	intron_variant	MODIFIER	c.-28+96C>G c.-28+96C>G	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	2/2		chrX	102126541
chrX:102126662	G G	C C	1	a0001c0001t0001g0006 a0001c0001t0001g0006	3	HG01884.hp2 HG02559.hp1 HG03540.hp2 HG01884.hp2 HG02559.hp1 HG03540.hp2	intron_variant	MODIFIER	c.-27-142G>C c.-27-142G>C	TCEAL2	ENSG00000184905.9	transcript	ENST00000372780.6	protein_coding	2/2		chrX	102126662

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer TCEAL2_chrX_102120679_102132712

JoGo Local Haplotype Explorer (on iGV) TCEAL2_chrX_102120679_102132712

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 8)

TTranscript Level Haplotype Info (Total: 7)

GGenebody Level Haplotype Info (Total: 11)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 8)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 14)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 24)

Haplotype Details by Sample (Haploid Level) (Total: 309)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 8)

GGenebody Level Haplotype Variants (Intron) (Total: 10)

External Link

Annotation (Repeats)

Annotation (SNP Array)