JoGo: Joint Open Genome and Omics Platform

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geneid	7070
ensemblid	ENSG00000154096.14
hgncid	11801
symbol	THY1
name	Thy-1 cell surface antigen
refseq_nuc	NM_006288.5
refseq_prot	NP_006279.2
ensembl_nuc	ENST00000284240.10
ensembl_prot	ENSP00000284240.6
mane_status	MANE Select
chr	chr11
start	119415476
end	119423172
strand	-
ver	v1.2
region	chr11:119415476-119423172
region5000	chr11:119410476-119428172
regionname0	THY1_chr11_119415476_119423172
regionname5000	THY1_chr11_119410476_119428172

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	161	381	91	72	158	18	40	118	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0002	0/0	161	2	0	0	2	0	0	2	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0003	0/0	161	1	1	0	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	486	380	91	72	158	18	39	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
c0002	0/0	486	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
c0003	0/0	486	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
c0004	0/0	486	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	4017	193	11	37	97	14	33	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0002	0/0	4018	47	8	15	21	2	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0003	1/0	4017	22	9	4	8	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0004	0/0	4017	15	12	3	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0005	0/0	4018	13	13	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0006	0/0	4018	9	9	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0007	0/0	4017	9	0	0	9	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0008	0/0	4018	7	0	0	7	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0009	0/0	4017	6	0	2	0	1	3	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0010	0/0	4018	5	0	5	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0011	0/0	4017	5	3	2	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0012	0/0	4019	4	0	3	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0013	0/0	4017	4	0	0	4	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0014	0/0	4017	4	0	0	4	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0015	0/0	4017	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0016	0/0	4018	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0017	0/0	4018	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0018	0/0	4017	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0019	0/0	4018	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0020	0/0	4018	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0021	0/0	4018	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0022	0/0	4018	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0023	0/0	4017	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0024	0/0	4017	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0025	0/0	4018	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0026	0/0	4018	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0027	0/0	4018	1	0	0	0	1	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0028	0/0	4018	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0029	0/0	4018	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0030	0/0	4018	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0031	0/0	4018	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0032	0/0	4018	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0033	0/0	4018	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0034	0/0	4017	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0035	0/0	4017	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0036	0/0	4017	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0037	0/0	4017	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0038	0/0	4017	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0039	0/0	4017	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0040	0/0	4017	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0041	0/0	4017	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0042	0/0	4017	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
t0043	0/0	4018	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	164	10	36	83	12	22	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0002	0/0	45	8	14	20	2	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0003	1/0	15	8	4	2	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0004	0/0	11	11	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0005	0/0	11	9	2	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0006	0/0	9	9	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0007	0/0	9	0	0	9	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0008	0/0	8	0	0	0	1	7	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0009	0/0	7	0	0	7	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0010	0/0	6	0	2	0	1	3	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0011	0/0	6	0	0	6	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0012	0/0	5	0	5	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0013	0/0	5	0	0	5	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0014	0/0	4	0	3	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0015	0/0	4	0	0	4	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0016	0/0	3	0	1	0	0	2	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0017	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0018	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0019	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0020	0/0	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0021	0/0	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0022	0/0	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0023	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0024	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0025	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0026	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0027	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0028	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0029	0/0	2	0	2	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0030	0/0	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0031	0/0	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0032	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0033	0/0	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0034	0/0	1	0	0	0	1	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0035	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0036	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0037	0/0	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0038	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0039	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0040	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0041	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0042	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0043	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0044	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0045	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0046	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0047	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0048	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0049	0/0	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0050	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0051	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0052	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0053	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0054	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0055	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0056	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0057	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0058	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0059	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0060	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0061	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0062	0/0	1	0	0	0	1	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0063	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0064	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0065	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
g0066	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	486	380	91	72	158	18	39	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0003	0/0	486	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0002c0002	0/0	486	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0003c0004	0/0	486	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	4502	190	11	37	95	14	32	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0002	0/0	4503	47	8	15	21	2	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0003	1/0	4502	22	9	4	8	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0004	0/0	4502	15	12	3	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0005	0/0	4503	13	13	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0006	0/0	4503	9	9	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0007	0/0	4502	9	0	0	9	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0008	0/0	4503	7	0	0	7	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0009	0/0	4502	6	0	2	0	1	3	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0010	0/0	4503	5	0	5	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0011	0/0	4502	5	3	2	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0012	0/0	4504	4	0	3	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0013	0/0	4502	4	0	0	4	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0014	0/0	4502	4	0	0	4	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0015	0/0	4502	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0016	0/0	4503	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0017	0/0	4503	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0018	0/0	4502	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0019	0/0	4503	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0020	0/0	4503	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0021	0/0	4503	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0022	0/0	4503	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0023	0/0	4502	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0024	0/0	4502	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0025	0/0	4503	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0026	0/0	4503	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0027	0/0	4503	1	0	0	0	1	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0028	0/0	4503	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0029	0/0	4503	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0030	0/0	4503	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0031	0/0	4503	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0032	0/0	4503	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0033	0/0	4503	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0034	0/0	4502	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0035	0/0	4502	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0036	0/0	4502	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0037	0/0	4502	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0038	0/0	4502	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0039	0/0	4502	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0040	0/0	4502	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0041	0/0	4502	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0042	0/0	4502	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0001t0043	0/0	4503	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0001c0003t0001	0/0	4502	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0002c0002t0001	0/0	4502	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172
a0003c0004t0016	0/0	4503	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	copy fasta	chr11	119410476	119428172

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	164	10	36	83	12	22	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0008	0/0	8	0	0	0	1	7	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0013	0/0	5	0	0	5	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0016	0/0	3	0	1	0	0	2	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0022	0/0	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0030	0/0	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0062	0/0	1	0	0	0	1	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0063	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0002g0002	0/0	45	8	14	20	2	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0002g0033	0/0	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0002g0038	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0003g0003	1/0	15	8	4	2	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0003g0011	0/0	6	0	0	6	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0003g0052	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0004g0005	0/0	11	9	2	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0004g0023	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0004g0049	0/0	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0005g0004	0/0	11	11	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0005g0041	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0005g0045	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0006g0006	0/0	9	9	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0007g0007	0/0	9	0	0	9	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0008g0009	0/0	7	0	0	7	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0009g0010	0/0	6	0	2	0	1	3	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0010g0012	0/0	5	0	5	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0011g0019	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0011g0029	0/0	2	0	2	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0012g0014	0/0	4	0	3	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0013g0015	0/0	4	0	0	4	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0014g0021	0/0	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0014g0066	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0015g0018	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0016g0025	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0017g0017	0/0	3	3	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0018g0020	0/0	3	0	0	3	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0019g0028	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0020g0024	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0021g0026	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0022g0027	0/0	2	2	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0023g0043	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0024g0044	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0025g0032	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0026g0046	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0027g0034	0/0	1	0	0	0	1	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0028g0035	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0029g0039	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0030g0047	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0031g0036	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0032g0037	0/0	1	0	1	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0033g0042	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0034g0053	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0035g0054	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0036g0055	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0037g0056	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0038g0057	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0039g0058	0/0	1	0	0	1	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0040g0059	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0041g0060	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0042g0061	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0001t0043g0065	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0001c0003t0001g0051	0/0	1	0	0	0	0	1	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0002c0002t0001g0031	0/0	2	0	0	2	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
a0003c0004t0016g0040	0/0	1	1	0	0	0	0	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00099	hp2	a0001	c0001	t0002	g0002	EUR	GBR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00323	hp1	a0001	c0001	t0001	g0062	EUR	FIN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00323	hp2	a0001	c0001	t0027	g0034	EUR	FIN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00408	hp1	a0001	c0001	t0036	g0055	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00423	hp1	a0001	c0001	t0014	g0021	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00597	hp1	a0001	c0001	t0007	g0007	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00609	hp2	a0001	c0001	t0001	g0013	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00639	hp1	a0001	c0001	t0010	g0012	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00673	hp1	a0001	c0001	t0002	g0038	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00733	hp2	a0001	c0001	t0009	g0010	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00735	hp1	a0001	c0001	t0002	g0033	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00741	hp1	a0001	c0001	t0004	g0049	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01069	hp1	a0001	c0001	t0002	g0002	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01071	hp2	a0001	c0001	t0002	g0002	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01074	hp1	a0001	c0001	t0003	g0003	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01074	hp2	a0001	c0001	t0002	g0002	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01099	hp1	a0001	c0001	t0004	g0005	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01106	hp1	a0001	c0001	t0001	g0016	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01109	hp1	a0001	c0001	t0003	g0003	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01167	hp1	a0001	c0001	t0011	g0029	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01167	hp2	a0001	c0001	t0002	g0002	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01168	hp2	a0001	c0001	t0010	g0012	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01169	hp1	a0001	c0001	t0011	g0029	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01169	hp2	a0001	c0001	t0010	g0012	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01243	hp2	a0001	c0001	t0002	g0002	AMR	PUR	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01255	hp2	a0001	c0001	t0002	g0002	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01256	hp1	a0001	c0001	t0012	g0014	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01256	hp2	a0001	c0001	t0002	g0002	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01258	hp1	a0001	c0001	t0002	g0002	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01258	hp2	a0001	c0001	t0002	g0002	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01261	hp1	a0001	c0001	t0010	g0012	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01346	hp1	a0001	c0001	t0010	g0012	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01433	hp1	a0001	c0001	t0002	g0002	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01515	hp2	a0001	c0001	t0002	g0002	EUR	IBS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01516	hp1	a0001	c0001	t0001	g0008	EUR	IBS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01884	hp2	a0003	c0004	t0016	g0040	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01891	hp1	a0001	c0001	t0004	g0023	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01891	hp2	a0001	c0001	t0005	g0004	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01943	hp1	a0001	c0001	t0003	g0003	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01952	hp1	a0001	c0001	t0002	g0002	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01975	hp2	a0001	c0001	t0032	g0037	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01993	hp1	a0001	c0001	t0002	g0002	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02004	hp1	a0001	c0001	t0002	g0002	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02015	hp1	a0001	c0001	t0002	g0002	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02015	hp2	a0001	c0001	t0014	g0021	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02055	hp1	a0001	c0001	t0025	g0032	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02055	hp2	a0001	c0001	t0019	g0028	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02056	hp1	a0001	c0001	t0001	g0050	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02056	hp2	a0001	c0001	t0003	g0011	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02071	hp1	a0001	c0001	t0013	g0015	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02074	hp2	a0001	c0001	t0013	g0015	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02080	hp1	a0001	c0001	t0018	g0020	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02129	hp2	a0001	c0001	t0013	g0015	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02132	hp1	a0001	c0001	t0007	g0007	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02135	hp1	a0001	c0001	t0007	g0007	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02145	hp1	a0001	c0001	t0001	g0048	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02145	hp2	a0001	c0001	t0004	g0005	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02148	hp1	a0001	c0001	t0012	g0014	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02148	hp2	a0001	c0001	t0009	g0010	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02155	hp1	a0001	c0001	t0001	g0013	EAS	CDX	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02155	hp2	a0001	c0001	t0013	g0015	EAS	CDX	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02165	hp2	a0001	c0001	t0001	g0013	EAS	CDX	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02273	hp1	a0001	c0001	t0003	g0003	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02273	hp2	a0001	c0001	t0012	g0014	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02280	hp1	a0001	c0001	t0003	g0052	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02280	hp2	a0001	c0001	t0004	g0005	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02300	hp2	a0001	c0001	t0002	g0002	AMR	PEL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02451	hp1	a0001	c0001	t0020	g0024	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02451	hp2	a0001	c0001	t0011	g0019	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02572	hp2	a0001	c0001	t0006	g0006	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02630	hp1	a0001	c0001	t0016	g0025	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02630	hp2	a0001	c0001	t0004	g0005	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02647	hp1	a0001	c0001	t0019	g0028	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02647	hp2	a0001	c0001	t0033	g0042	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02717	hp1	a0001	c0001	t0002	g0002	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02717	hp2	a0001	c0001	t0004	g0005	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02723	hp1	a0001	c0001	t0023	g0043	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02723	hp2	a0001	c0001	t0002	g0002	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02809	hp1	a0001	c0001	t0002	g0002	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02809	hp2	a0001	c0001	t0003	g0003	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02886	hp1	a0001	c0001	t0020	g0024	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02895	hp1	a0001	c0001	t0004	g0023	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02895	hp2	a0001	c0001	t0002	g0002	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02896	hp1	a0001	c0001	t0005	g0004	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02896	hp2	a0001	c0001	t0006	g0006	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02897	hp1	a0001	c0001	t0004	g0023	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02897	hp2	a0001	c0001	t0006	g0006	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02922	hp1	a0001	c0001	t0005	g0004	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02922	hp2	a0001	c0001	t0004	g0005	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02965	hp1	a0001	c0001	t0002	g0002	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02965	hp2	a0001	c0001	t0011	g0019	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02970	hp1	a0001	c0001	t0004	g0005	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02970	hp2	a0001	c0001	t0015	g0018	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02976	hp1	a0001	c0001	t0017	g0017	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02976	hp2	a0001	c0001	t0006	g0006	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03017	hp1	a0001	c0001	t0001	g0063	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03017	hp2	a0001	c0001	t0001	g0008	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03041	hp1	a0001	c0001	t0016	g0025	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03041	hp2	a0001	c0001	t0006	g0006	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03098	hp1	a0001	c0001	t0004	g0005	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03098	hp2	a0001	c0001	t0006	g0006	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03130	hp1	a0001	c0001	t0015	g0018	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03130	hp2	a0001	c0001	t0021	g0026	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03139	hp1	a0001	c0001	t0003	g0003	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03139	hp2	a0001	c0001	t0021	g0026	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03195	hp1	a0001	c0001	t0003	g0003	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03195	hp2	a0001	c0001	t0017	g0017	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03209	hp1	a0001	c0001	t0004	g0005	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03209	hp2	a0001	c0001	t0004	g0005	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03225	hp2	a0001	c0001	t0003	g0003	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03453	hp1	a0001	c0001	t0003	g0003	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03453	hp2	a0001	c0001	t0005	g0004	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03486	hp1	a0001	c0001	t0003	g0003	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03486	hp2	a0001	c0001	t0026	g0046	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03490	hp2	a0001	c0001	t0001	g0008	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03491	hp1	a0001	c0001	t0002	g0002	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03491	hp2	a0001	c0001	t0001	g0008	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03492	hp1	a0001	c0001	t0001	g0008	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03492	hp2	a0001	c0001	t0001	g0008	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03516	hp1	a0001	c0001	t0005	g0041	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03516	hp2	a0001	c0001	t0005	g0004	AFR	ESN	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03540	hp1	a0001	c0001	t0022	g0027	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03540	hp2	a0001	c0001	t0005	g0004	AFR	GWD	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03579	hp1	a0001	c0001	t0005	g0004	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03579	hp2	a0001	c0001	t0043	g0065	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03654	hp2	a0001	c0001	t0001	g0016	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03669	hp1	a0001	c0001	t0034	g0053	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03688	hp1	a0001	c0001	t0030	g0047	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03704	hp2	a0001	c0001	t0009	g0010	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03710	hp1	a0001	c0001	t0009	g0010	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04184	hp1	a0001	c0001	t0001	g0008	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04199	hp2	a0001	c0003	t0001	g0051	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04204	hp2	a0001	c0001	t0001	g0016	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04228	hp1	a0001	c0001	t0009	g0010	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18522	hp1	a0001	c0001	t0002	g0002	AFR	YRI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18522	hp2	a0001	c0001	t0024	g0044	AFR	YRI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18747	hp1	a0001	c0001	t0002	g0002	EAS	CHB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18906	hp2	a0001	c0001	t0005	g0004	AFR	YRI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18939	hp2	a0002	c0002	t0001	g0031	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18940	hp1	a0001	c0001	t0003	g0011	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18941	hp1	a0001	c0001	t0007	g0007	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18942	hp2	a0001	c0001	t0003	g0011	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18945	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18947	hp1	a0001	c0001	t0007	g0007	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18949	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18956	hp2	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18961	hp1	a0001	c0001	t0001	g0022	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18961	hp2	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18964	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18966	hp2	a0001	c0001	t0018	g0020	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18967	hp2	a0001	c0001	t0014	g0021	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18973	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18975	hp1	a0001	c0001	t0018	g0020	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18977	hp1	a0001	c0001	t0003	g0011	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18977	hp2	a0001	c0001	t0001	g0013	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18978	hp2	a0001	c0001	t0007	g0007	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18980	hp1	a0001	c0001	t0012	g0014	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18981	hp2	a0001	c0001	t0031	g0036	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18982	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18983	hp1	a0001	c0001	t0007	g0007	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18985	hp2	a0001	c0001	t0001	g0022	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18987	hp1	a0001	c0001	t0038	g0057	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18989	hp1	a0001	c0001	t0014	g0066	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18989	hp2	a0001	c0001	t0028	g0035	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18992	hp1	a0001	c0001	t0001	g0030	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18992	hp2	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18994	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18998	hp2	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18999	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18999	hp2	a0001	c0001	t0003	g0011	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19003	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19005	hp2	a0001	c0001	t0003	g0003	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19007	hp1	a0001	c0001	t0003	g0003	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19009	hp1	a0001	c0001	t0039	g0058	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19010	hp1	a0001	c0001	t0001	g0030	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19011	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19030	hp1	a0001	c0001	t0003	g0003	AFR	LWK	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19030	hp2	a0001	c0001	t0002	g0002	AFR	LWK	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19043	hp1	a0001	c0001	t0040	g0059	AFR	LWK	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19043	hp2	a0001	c0001	t0022	g0027	AFR	LWK	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19055	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19056	hp2	a0001	c0001	t0037	g0056	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19057	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19058	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19063	hp1	a0001	c0001	t0001	g0022	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19065	hp1	a0002	c0002	t0001	g0031	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19065	hp2	a0001	c0001	t0001	g0064	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19068	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19070	hp2	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19074	hp2	a0001	c0001	t0007	g0007	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19077	hp2	a0001	c0001	t0007	g0007	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19080	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19082	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19083	hp1	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19083	hp2	a0001	c0001	t0001	g0013	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19085	hp1	a0001	c0001	t0008	g0009	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19088	hp1	a0001	c0001	t0003	g0011	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19088	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19091	hp1	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19240	hp1	a0001	c0001	t0002	g0002	AFR	YRI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA19240	hp2	a0001	c0001	t0017	g0017	AFR	YRI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20129	hp2	a0001	c0001	t0005	g0004	AFR	ASW	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20805	hp2	a0001	c0001	t0009	g0010	EUR	TSI	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20905	hp1	a0001	c0001	t0001	g0008	SAS	GIH	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20905	hp2	a0001	c0001	t0041	g0060	SAS	GIH	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01123	hp1	a0001	c0001	t0004	g0005	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02109	hp1	a0001	c0001	t0042	g0061	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02109	hp2	a0001	c0001	t0006	g0006	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02486	hp1	a0001	c0001	t0035	g0054	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02486	hp2	a0001	c0001	t0006	g0006	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02559	hp1	a0001	c0001	t0003	g0003	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG02559	hp2	a0001	c0001	t0015	g0018	AFR	ACB	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03471	hp1	a0001	c0001	t0006	g0006	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG03471	hp2	a0001	c0001	t0005	g0004	AFR	MSL	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG06807	hp1	a0001	c0001	t0005	g0045	AFR	USA	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA18955	hp2	a0001	c0001	t0002	g0002	EAS	JPT	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20300	hp1	a0001	c0001	t0005	g0004	AFR	USA	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA20300	hp2	a0001	c0001	t0011	g0019	AFR	USA	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA21309	hp1	a0001	c0001	t0029	g0039	AFR	LWK	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172
homoSapiens_grch38	hp1	a0001	c0001	t0003	g0003	REF	REF	THY1_chr11_119410476_119428172	THY1	chr11	119410476	119428172

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr11:119420198	A A	G G	1	a0003 a0003	1	HG01884.hp2 HG01884.hp2	missense_variant	MODERATE	c.226T>C c.226T>C	p.Ser76Pro p.Ser76Pro	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/4	310/4502	226/486	76/161			chr11	119420198
chr11:119420884	C C	T T	1	a0002 a0002	2	NA18939.hp2 NA19065.hp1 NA18939.hp2 NA19065.hp1	missense_variant	MODERATE	c.22G>A c.22G>A	p.Ala8Thr p.Ala8Thr	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/4	106/4502	22/486	8/161			chr11	119420884

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr11:119420262	C C	T T	1	a0001c0003 a0001c0003	1	HG04199.hp2 HG04199.hp2	synonymous_variant	LOW	c.162G>A c.162G>A	p.Leu54Leu p.Leu54Leu	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/4	246/4502	162/486	54/161			chr11	119420262

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr11:119415537	C C	T T	1	a0001c0001t0023 a0001c0001t0023	1	HG02723.hp1 HG02723.hp1	3_prime_UTR_variant	MODIFIER	c.3871G>A c.3871G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3871	chr11	119415537
chr11:119415558	G G	A A	1	a0001c0001t0009 a0001c0001t0009	6	HG00733.hp2 HG02148.hp2 HG03704.hp2 others(3): Show HG00733.hp2 HG02148.hp2 HG03704.hp2 HG03710.hp1 HG04228.hp1 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.3850C>T c.3850C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3850	chr11	119415558
chr11:119415565	C C	G G	8	a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 others(5): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0027 a0001c0001t0028 a0001c0001t0031 a0001c0001t0032	67	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(64): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.3843G>C c.3843G>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3843	chr11	119415565
chr11:119415697	T T	G G	1	a0001c0001t0027 a0001c0001t0027	1	HG00323.hp2 HG00323.hp2	3_prime_UTR_variant	MODIFIER	c.3711A>C c.3711A>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3711	chr11	119415697
chr11:119415715	A A	G G	1	a0001c0001t0005 a0001c0001t0005	13	HG01891.hp2 HG02896.hp1 HG02922.hp1 others(10): Show HG01891.hp2 HG02896.hp1 HG02922.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20129.hp2 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.3693T>C c.3693T>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3693	chr11	119415715
chr11:119415914	T T	TG TG	23	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(20): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0043 a0003c0004t0016	109	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(106): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02572.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG06807.hp1 NA18522.hp1 NA18747.hp1 NA18906.hp2 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.3493dupC c.3493dupC	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3493	chr11	119415914
chr11:119416072	G G	A A	1	a0001c0001t0031 a0001c0001t0031	1	NA18981.hp2 NA18981.hp2	3_prime_UTR_variant	MODIFIER	c.3336C>T c.3336C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3336	chr11	119416072
chr11:119416130	C C	T T	1	a0001c0001t0040 a0001c0001t0040	1	NA19043.hp1 NA19043.hp1	3_prime_UTR_variant	MODIFIER	c.3278G>A c.3278G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3278	chr11	119416130
chr11:119416234	G G	C C	4	a0001c0001t0007 a0001c0001t0033 a0001c0001t0036 others(1): Show a0001c0001t0007 a0001c0001t0033 a0001c0001t0036 a0001c0001t0038	12	HG00408.hp1 HG00597.hp1 HG02132.hp1 others(9): Show HG00408.hp1 HG00597.hp1 HG02132.hp1 HG02135.hp1 HG02647.hp2 NA18941.hp1 NA18947.hp1 NA18978.hp2 NA18983.hp1 NA18987.hp1 NA19074.hp2 NA19077.hp2	3_prime_UTR_variant	MODIFIER	c.3174C>G c.3174C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3174	chr11	119416234
chr11:119416234	G G	T T	8	a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 others(5): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0027 a0001c0001t0031 a0001c0001t0032 a0001c0001t0039	67	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(64): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19009.hp1 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.3174C>A c.3174C>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3174	chr11	119416234
chr11:119416235	G G	C C	2	a0001c0001t0006 a0001c0001t0041 a0001c0001t0006 a0001c0001t0041	10	HG02109.hp2 HG02486.hp2 HG02572.hp2 others(7): Show HG02109.hp2 HG02486.hp2 HG02572.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03471.hp1 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.3173C>G c.3173C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	3173	chr11	119416235
chr11:119416429	T T	C C	1	a0001c0001t0030 a0001c0001t0030	1	HG03688.hp1 HG03688.hp1	3_prime_UTR_variant	MODIFIER	c.2979A>G c.2979A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2979	chr11	119416429
chr11:119416433	C C	T T	1	a0001c0001t0038 a0001c0001t0038	1	NA18987.hp1 NA18987.hp1	3_prime_UTR_variant	MODIFIER	c.2975G>A c.2975G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2975	chr11	119416433
chr11:119416465	G G	A A	2	a0001c0001t0026 a0001c0001t0030 a0001c0001t0026 a0001c0001t0030	2	HG03486.hp2 HG03688.hp1 HG03486.hp2 HG03688.hp1	3_prime_UTR_variant	MODIFIER	c.2943C>T c.2943C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2943	chr11	119416465
chr11:119416479	T T	C C	4	a0001c0001t0017 a0001c0001t0022 a0001c0001t0029 others(1): Show a0001c0001t0017 a0001c0001t0022 a0001c0001t0029 a0001c0001t0033	7	HG02647.hp2 HG02976.hp1 HG03195.hp2 others(4): Show HG02647.hp2 HG02976.hp1 HG03195.hp2 HG03540.hp1 NA19043.hp2 NA19240.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.2929A>G c.2929A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2929	chr11	119416479
chr11:119416626	C C	T T	2	a0001c0001t0026 a0001c0001t0030 a0001c0001t0026 a0001c0001t0030	2	HG03486.hp2 HG03688.hp1 HG03486.hp2 HG03688.hp1	3_prime_UTR_variant	MODIFIER	c.2782G>A c.2782G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2782	chr11	119416626
chr11:119416684	G G	A A	4	a0001c0001t0008 a0001c0001t0026 a0001c0001t0030 others(1): Show a0001c0001t0008 a0001c0001t0026 a0001c0001t0030 a0001c0001t0031	10	HG03486.hp2 HG03688.hp1 NA18956.hp2 others(7): Show HG03486.hp2 HG03688.hp1 NA18956.hp2 NA18961.hp2 NA18981.hp2 NA18992.hp2 NA18998.hp2 NA19070.hp2 NA19083.hp1 NA19085.hp1	3_prime_UTR_variant	MODIFIER	c.2724C>T c.2724C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2724	chr11	119416684
chr11:119416706	C C	T T	1	a0001c0001t0010 a0001c0001t0010	5	HG00639.hp1 HG01168.hp2 HG01169.hp2 others(2): Show HG00639.hp1 HG01168.hp2 HG01169.hp2 HG01261.hp1 HG01346.hp1	3_prime_UTR_variant	MODIFIER	c.2702G>A c.2702G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2702	chr11	119416706
chr11:119416723	G G	A A	1	a0001c0001t0032 a0001c0001t0032	1	HG01975.hp2 HG01975.hp2	3_prime_UTR_variant	MODIFIER	c.2685C>T c.2685C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2685	chr11	119416723
chr11:119416840	G G	A A	2	a0001c0001t0004 a0001c0001t0011 a0001c0001t0004 a0001c0001t0011	20	HG00741.hp1 HG01099.hp1 HG01123.hp1 others(17): Show HG00741.hp1 HG01099.hp1 HG01123.hp1 HG01167.hp1 HG01169.hp1 HG01891.hp1 HG02145.hp2 HG02280.hp2 HG02451.hp2 HG02630.hp2 HG02717.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG03098.hp1 HG03209.hp1 HG03209.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.2568C>T c.2568C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2568	chr11	119416840
chr11:119416919	C C	G G	1	a0001c0001t0037 a0001c0001t0037	1	NA19056.hp2 NA19056.hp2	3_prime_UTR_variant	MODIFIER	c.2489G>C c.2489G>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2489	chr11	119416919
chr11:119417083	G G	A A	2	a0001c0001t0006 a0001c0001t0043 a0001c0001t0006 a0001c0001t0043	10	HG02109.hp2 HG02486.hp2 HG02572.hp2 others(7): Show HG02109.hp2 HG02486.hp2 HG02572.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03471.hp1 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.2325C>T c.2325C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2325	chr11	119417083
chr11:119417317	C C	T T	1	a0001c0001t0018 a0001c0001t0018	3	HG02080.hp1 NA18966.hp2 NA18975.hp1 HG02080.hp1 NA18966.hp2 NA18975.hp1	3_prime_UTR_variant	MODIFIER	c.2091G>A c.2091G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2091	chr11	119417317
chr11:119417371	G G	A A	2	a0001c0001t0016 a0003c0004t0016 a0001c0001t0016 a0003c0004t0016	3	HG01884.hp2 HG02630.hp1 HG03041.hp1 HG01884.hp2 HG02630.hp1 HG03041.hp1	3_prime_UTR_variant	MODIFIER	c.2037C>T c.2037C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2037	chr11	119417371
chr11:119417385	G G	C C	1	a0001c0001t0025 a0001c0001t0025	1	HG02055.hp1 HG02055.hp1	3_prime_UTR_variant	MODIFIER	c.2023C>G c.2023C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	2023	chr11	119417385
chr11:119417635	G G	T T	1	a0001c0001t0026 a0001c0001t0026	1	HG03486.hp2 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.1773C>A c.1773C>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1773	chr11	119417635
chr11:119417825	G G	GA GA	1	a0001c0001t0012 a0001c0001t0012	4	HG01256.hp1 HG02148.hp1 HG02273.hp2 others(1): Show HG01256.hp1 HG02148.hp1 HG02273.hp2 NA18980.hp1	3_prime_UTR_variant	MODIFIER	c.1582dupT c.1582dupT	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1582	chr11	119417825
chr11:119417850	G G	A A	2	a0001c0001t0017 a0001c0001t0033 a0001c0001t0017 a0001c0001t0033	4	HG02647.hp2 HG02976.hp1 HG03195.hp2 others(1): Show HG02647.hp2 HG02976.hp1 HG03195.hp2 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.1558C>T c.1558C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1558	chr11	119417850
chr11:119417851	C C	T T	3	a0001c0001t0019 a0001c0001t0020 a0001c0001t0025 a0001c0001t0019 a0001c0001t0020 a0001c0001t0025	5	HG02055.hp1 HG02055.hp2 HG02451.hp1 others(2): Show HG02055.hp1 HG02055.hp2 HG02451.hp1 HG02647.hp1 HG02886.hp1	3_prime_UTR_variant	MODIFIER	c.1557G>A c.1557G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1557	chr11	119417851
chr11:119417871	T T	A A	1	a0001c0001t0042 a0001c0001t0042	1	HG02109.hp1 HG02109.hp1	3_prime_UTR_variant	MODIFIER	c.1537A>T c.1537A>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1537	chr11	119417871
chr11:119417901	C C	T T	1	a0001c0001t0019 a0001c0001t0019	2	HG02055.hp2 HG02647.hp1 HG02055.hp2 HG02647.hp1	3_prime_UTR_variant	MODIFIER	c.1507G>A c.1507G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1507	chr11	119417901
chr11:119417909	A A	G G	26	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(23): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0043 a0003c0004t0016	114	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(111): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp2 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1499T>C c.1499T>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1499	chr11	119417909
chr11:119418091	G G	A A	1	a0001c0001t0022 a0001c0001t0022	2	HG03540.hp1 NA19043.hp2 HG03540.hp1 NA19043.hp2	3_prime_UTR_variant	MODIFIER	c.1317C>T c.1317C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1317	chr11	119418091
chr11:119418108	G G	A A	1	a0001c0001t0013 a0001c0001t0013	4	HG02071.hp1 HG02074.hp2 HG02129.hp2 others(1): Show HG02071.hp1 HG02074.hp2 HG02129.hp2 HG02155.hp2	3_prime_UTR_variant	MODIFIER	c.1300C>T c.1300C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1300	chr11	119418108
chr11:119418280	C C	G G	1	a0001c0001t0011 a0001c0001t0011	5	HG01167.hp1 HG01169.hp1 HG02451.hp2 others(2): Show HG01167.hp1 HG01169.hp1 HG02451.hp2 HG02965.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1128G>C c.1128G>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1128	chr11	119418280
chr11:119418333	T T	C C	1	a0001c0001t0014 a0001c0001t0014	4	HG00423.hp1 HG02015.hp2 NA18967.hp2 others(1): Show HG00423.hp1 HG02015.hp2 NA18967.hp2 NA18989.hp1	3_prime_UTR_variant	MODIFIER	c.1075A>G c.1075A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1075	chr11	119418333
chr11:119418403	G G	A A	1	a0001c0001t0043 a0001c0001t0043	1	HG03579.hp2 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.1005C>T c.1005C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1005	chr11	119418403
chr11:119418404	C C	T T	2	a0001c0001t0023 a0001c0001t0024 a0001c0001t0023 a0001c0001t0024	2	HG02723.hp1 NA18522.hp2 HG02723.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.1004G>A c.1004G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	1004	chr11	119418404
chr11:119418425	C C	T T	2	a0001c0001t0016 a0003c0004t0016 a0001c0001t0016 a0003c0004t0016	3	HG01884.hp2 HG02630.hp1 HG03041.hp1 HG01884.hp2 HG02630.hp1 HG03041.hp1	3_prime_UTR_variant	MODIFIER	c.983G>A c.983G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	983	chr11	119418425
chr11:119418873	C C	T T	1	a0001c0001t0036 a0001c0001t0036	1	HG00408.hp1 HG00408.hp1	3_prime_UTR_variant	MODIFIER	c.535G>A c.535G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	535	chr11	119418873
chr11:119418934	G G	C C	1	a0001c0001t0019 a0001c0001t0019	2	HG02055.hp2 HG02647.hp1 HG02055.hp2 HG02647.hp1	3_prime_UTR_variant	MODIFIER	c.474C>G c.474C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	474	chr11	119418934
chr11:119419133	C C	T T	5	a0001c0001t0006 a0001c0001t0015 a0001c0001t0019 others(2): Show a0001c0001t0006 a0001c0001t0015 a0001c0001t0019 a0001c0001t0023 a0001c0001t0024	16	HG02055.hp2 HG02109.hp2 HG02486.hp2 others(13): Show HG02055.hp2 HG02109.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02723.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03471.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.275G>A c.275G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	275	chr11	119419133
chr11:119419154	C C	T T	1	a0001c0001t0035 a0001c0001t0035	1	HG02486.hp1 HG02486.hp1	3_prime_UTR_variant	MODIFIER	c.254G>A c.254G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	254	chr11	119419154
chr11:119419235	C C	T T	1	a0001c0001t0034 a0001c0001t0034	1	HG03669.hp1 HG03669.hp1	3_prime_UTR_variant	MODIFIER	c.173G>A c.173G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	173	chr11	119419235
chr11:119419324	G G	A A	1	a0001c0001t0043 a0001c0001t0043	1	HG03579.hp2 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.84C>T c.84C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	84	chr11	119419324
chr11:119419324	G G	C C	19	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(16): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0018 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0003t0001 a0002c0002t0001	248	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(245): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18992.hp1 NA18994.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.84C>G c.84C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	4/4	84	chr11	119419324

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr11:119419613	T T	C C	1	a0001c0001t0001g0022 a0001c0001t0001g0022	3	NA18961.hp1 NA18985.hp2 NA19063.hp1 NA18961.hp1 NA18985.hp2 NA19063.hp1	intron_variant	MODIFIER	c.374-93A>G c.374-93A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/3	chr11	119419613
chr11:119419654	C C	G G	5	a0001c0001t0006g0006 a0001c0001t0015g0018 a0001c0001t0019g0028 others(2): Show a0001c0001t0006g0006 a0001c0001t0015g0018 a0001c0001t0019g0028 a0001c0001t0023g0043 a0001c0001t0024g0044	16	HG02055.hp2 HG02109.hp2 HG02486.hp2 others(13): Show HG02055.hp2 HG02109.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02723.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03471.hp1 NA18522.hp2	intron_variant	MODIFIER	c.374-134G>C c.374-134G>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/3	chr11	119419654
chr11:119419655	A A	G G	1	a0001c0001t0022g0027 a0001c0001t0022g0027	2	HG03540.hp1 NA19043.hp2 HG03540.hp1 NA19043.hp2	intron_variant	MODIFIER	c.374-135T>C c.374-135T>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/3	chr11	119419655
chr11:119419659	C C	T T	10	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 others(7): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0008g0009 a0001c0001t0010g0012 a0001c0001t0012g0014 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0031g0036 a0001c0001t0032g0037	67	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(64): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.374-139G>A c.374-139G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/3	chr11	119419659
chr11:119419792	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	8	HG01516.hp1 HG03017.hp2 HG03490.hp2 others(5): Show HG01516.hp1 HG03017.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG04184.hp1 NA20905.hp1	intron_variant	MODIFIER	c.373+259G>A c.373+259G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	3/3	chr11	119419792
chr11:119420427	G G	A A	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG00323.hp1 HG00323.hp1	intron_variant	MODIFIER	c.38-41C>T c.38-41C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420427
chr11:119420493	G G	A A	1	a0001c0001t0001g0030 a0001c0001t0001g0030	2	NA18992.hp1 NA19010.hp1 NA18992.hp1 NA19010.hp1	intron_variant	MODIFIER	c.38-107C>T c.38-107C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420493
chr11:119420496	C C	T T	1	a0001c0001t0005g0045 a0001c0001t0005g0045	1	HG06807.hp1 HG06807.hp1	intron_variant	MODIFIER	c.38-110G>A c.38-110G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420496
chr11:119420546	C C	G G	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.38-160G>C c.38-160G>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420546
chr11:119420693	T T	C C	22	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 others(19): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0006g0006 a0001c0001t0008g0009 a0001c0001t0010g0012 a0001c0001t0012g0014 a0001c0001t0015g0018 a0001c0001t0017g0017 a0001c0001t0019g0028 a0001c0001t0020g0024 a0001c0001t0022g0027 a0001c0001t0023g0043 a0001c0001t0024g0044 a0001c0001t0025g0032 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0029g0039 a0001c0001t0031g0036 a0001c0001t0032g0037 a0001c0001t0033g0042 a0001c0001t0043g0065	94	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(91): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03195.hp2 HG03471.hp1 HG03491.hp1 HG03540.hp1 HG03579.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.37+176A>G c.37+176A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420693
chr11:119420727	C C	T T	1	a0001c0001t0004g0049 a0001c0001t0004g0049	1	HG00741.hp1 HG00741.hp1	intron_variant	MODIFIER	c.37+142G>A c.37+142G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420727
chr11:119420735	T T	C C	11	a0001c0001t0002g0002 a0001c0001t0002g0038 a0001c0001t0008g0009 others(8): Show a0001c0001t0002g0002 a0001c0001t0002g0038 a0001c0001t0008g0009 a0001c0001t0012g0014 a0001c0001t0020g0024 a0001c0001t0025g0032 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0031g0036 a0001c0001t0032g0037 a0001c0001t0043g0065	65	HG00099.hp2 HG00323.hp2 HG00673.hp1 others(62): Show HG00099.hp2 HG00323.hp2 HG00673.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02055.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02451.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 HG03579.hp2 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.37+134A>G c.37+134A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420735
chr11:119420770	G G	A A	33	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0013 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0030 a0001c0001t0001g0050 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0003g0052 a0001c0001t0004g0005 a0001c0001t0004g0023 a0001c0001t0004g0049 a0001c0001t0007g0007 a0001c0001t0009g0010 a0001c0001t0011g0019 a0001c0001t0011g0029 a0001c0001t0013g0015 a0001c0001t0014g0021 a0001c0001t0014g0066 a0001c0001t0018g0020 a0001c0001t0034g0053 a0001c0001t0035g0054 a0001c0001t0036g0055 a0001c0001t0037g0056 a0001c0001t0038g0057 a0001c0001t0039g0058 a0001c0001t0040g0059 a0001c0001t0041g0060 a0001c0001t0042g0061 a0001c0003t0001g0051 a0002c0002t0001g0031	248	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(245): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18992.hp1 NA18994.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.37+99C>T c.37+99C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420770
chr11:119420778	C C	T T	1	a0001c0001t0011g0029 a0001c0001t0011g0029	2	HG01167.hp1 HG01169.hp1 HG01167.hp1 HG01169.hp1	intron_variant	MODIFIER	c.37+91G>A c.37+91G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420778
chr11:119420835	G G	A A	5	a0001c0001t0006g0006 a0001c0001t0015g0018 a0001c0001t0019g0028 others(2): Show a0001c0001t0006g0006 a0001c0001t0015g0018 a0001c0001t0019g0028 a0001c0001t0023g0043 a0001c0001t0024g0044	16	HG02055.hp2 HG02109.hp2 HG02486.hp2 others(13): Show HG02055.hp2 HG02109.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02723.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03471.hp1 NA18522.hp2	intron_variant	MODIFIER	c.37+34C>T c.37+34C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	2/3	chr11	119420835
chr11:119420949	G G	A A	2	a0001c0001t0005g0004 a0001c0001t0005g0045 a0001c0001t0005g0004 a0001c0001t0005g0045	12	HG01891.hp2 HG02896.hp1 HG02922.hp1 others(9): Show HG01891.hp2 HG02896.hp1 HG02922.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-24-20C>T c.-24-20C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119420949
chr11:119420963	T T	C C	1	a0001c0001t0002g0038 a0001c0001t0002g0038	1	HG00673.hp1 HG00673.hp1	intron_variant	MODIFIER	c.-24-34A>G c.-24-34A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119420963
chr11:119420978	A A	G G	62	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0013 others(59): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0030 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0003g0052 a0001c0001t0004g0005 a0001c0001t0004g0023 a0001c0001t0004g0049 a0001c0001t0005g0004 a0001c0001t0005g0041 a0001c0001t0005g0045 a0001c0001t0006g0006 a0001c0001t0007g0007 a0001c0001t0008g0009 a0001c0001t0009g0010 a0001c0001t0010g0012 a0001c0001t0011g0019 a0001c0001t0011g0029 a0001c0001t0012g0014 a0001c0001t0013g0015 a0001c0001t0014g0021 a0001c0001t0014g0066 a0001c0001t0015g0018 a0001c0001t0016g0025 a0001c0001t0017g0017 a0001c0001t0018g0020 a0001c0001t0019g0028 a0001c0001t0020g0024 a0001c0001t0021g0026 a0001c0001t0022g0027 a0001c0001t0023g0043 a0001c0001t0024g0044 a0001c0001t0025g0032 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0029g0039 a0001c0001t0031g0036 a0001c0001t0032g0037 a0001c0001t0033g0042 a0001c0001t0034g0053 a0001c0001t0035g0054 a0001c0001t0036g0055 a0001c0001t0037g0056 a0001c0001t0038g0057 a0001c0001t0039g0058 a0001c0001t0040g0059 a0001c0001t0041g0060 a0001c0001t0042g0061 a0001c0001t0043g0065 a0001c0003t0001g0051 a0002c0002t0001g0031 a0003c0004t0016g0040	361	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(358): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-24-49T>C c.-24-49T>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119420978
chr11:119421277	TA TA	T T	2	a0001c0001t0001g0013 a0001c0001t0029g0039 a0001c0001t0001g0013 a0001c0001t0029g0039	6	HG00609.hp2 HG02155.hp1 HG02165.hp2 others(3): Show HG00609.hp2 HG02155.hp1 HG02165.hp2 NA18977.hp2 NA19083.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-24-349delT c.-24-349delT	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119421277
chr11:119421332	A A	G G	1	a0001c0001t0043g0065 a0001c0001t0043g0065	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-24-403T>C c.-24-403T>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119421332
chr11:119421490	C C	T T	1	a0001c0001t0043g0065 a0001c0001t0043g0065	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-24-561G>A c.-24-561G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119421490
chr11:119421604	T T	C C	10	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 others(7): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0008g0009 a0001c0001t0010g0012 a0001c0001t0012g0014 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0031g0036 a0001c0001t0032g0037	67	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(64): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-24-675A>G c.-24-675A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119421604
chr11:119422002	T T	C C	34	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0013 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0030 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0003g0052 a0001c0001t0004g0005 a0001c0001t0004g0023 a0001c0001t0004g0049 a0001c0001t0007g0007 a0001c0001t0009g0010 a0001c0001t0011g0019 a0001c0001t0011g0029 a0001c0001t0013g0015 a0001c0001t0014g0021 a0001c0001t0014g0066 a0001c0001t0018g0020 a0001c0001t0034g0053 a0001c0001t0035g0054 a0001c0001t0036g0055 a0001c0001t0037g0056 a0001c0001t0038g0057 a0001c0001t0039g0058 a0001c0001t0040g0059 a0001c0001t0041g0060 a0001c0001t0042g0061 a0001c0003t0001g0051 a0002c0002t0001g0031	249	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(246): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18992.hp1 NA18994.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp2 NA19082.hp2 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-24-1073A>G c.-24-1073A>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422002
chr11:119422065	G G	C C	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	HG03017.hp1 HG03017.hp1	intron_variant	MODIFIER	c.-25+1048C>G c.-25+1048C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422065
chr11:119422086	G G	T T	1	a0001c0001t0043g0065 a0001c0001t0043g0065	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-25+1027C>A c.-25+1027C>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422086
chr11:119422288	T T	A A	1	a0001c0001t0003g0011 a0001c0001t0003g0011	6	HG02056.hp2 NA18940.hp1 NA18942.hp2 others(3): Show HG02056.hp2 NA18940.hp1 NA18942.hp2 NA18977.hp1 NA18999.hp2 NA19088.hp1	intron_variant	MODIFIER	c.-25+825A>T c.-25+825A>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422288
chr11:119422329	G G	A A	1	a0001c0001t0004g0023 a0001c0001t0004g0023	3	HG01891.hp1 HG02895.hp1 HG02897.hp1 HG01891.hp1 HG02895.hp1 HG02897.hp1	intron_variant	MODIFIER	c.-25+784C>T c.-25+784C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422329
chr11:119422397	G G	A A	2	a0001c0001t0001g0064 a0002c0002t0001g0031 a0001c0001t0001g0064 a0002c0002t0001g0031	3	NA18939.hp2 NA19065.hp1 NA19065.hp2 NA18939.hp2 NA19065.hp1 NA19065.hp2	intron_variant	MODIFIER	c.-25+716C>T c.-25+716C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422397
chr11:119422506	C C	A A	11	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 others(8): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0008g0009 a0001c0001t0010g0012 a0001c0001t0012g0014 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0031g0036 a0001c0001t0032g0037 a0001c0001t0043g0065	68	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(65): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 HG03579.hp2 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-25+607G>T c.-25+607G>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422506
chr11:119422687	G G	A A	10	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 others(7): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0008g0009 a0001c0001t0010g0012 a0001c0001t0012g0014 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0031g0036 a0001c0001t0032g0037	67	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(64): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-25+426C>T c.-25+426C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422687
chr11:119422731	A A	G G	13	a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 others(10): Show a0001c0001t0002g0002 a0001c0001t0002g0033 a0001c0001t0002g0038 a0001c0001t0008g0009 a0001c0001t0010g0012 a0001c0001t0012g0014 a0001c0001t0020g0024 a0001c0001t0025g0032 a0001c0001t0027g0034 a0001c0001t0028g0035 a0001c0001t0031g0036 a0001c0001t0032g0037 a0001c0001t0043g0065	71	HG00099.hp2 HG00323.hp2 HG00639.hp1 others(68): Show HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02055.hp1 HG02148.hp1 HG02273.hp2 HG02300.hp2 HG02451.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02965.hp1 HG03491.hp1 HG03579.hp2 NA18522.hp1 NA18747.hp1 NA18945.hp1 NA18949.hp1 NA18955.hp2 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19011.hp2 NA19030.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-25+382T>C c.-25+382T>C	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119422731
chr11:119423052	T T	A A	1	a0001c0001t0043g0065 a0001c0001t0043g0065	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-25+61A>T c.-25+61A>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119423052
chr11:119423064	G G	A A	1	a0001c0001t0043g0065 a0001c0001t0043g0065	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-25+49C>T c.-25+49C>T	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119423064
chr11:119423070	C C	T T	1	a0001c0001t0001g0016 a0001c0001t0001g0016	3	HG01106.hp1 HG03654.hp2 HG04204.hp2 HG01106.hp1 HG03654.hp2 HG04204.hp2	intron_variant	MODIFIER	c.-25+43G>A c.-25+43G>A	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119423070
chr11:119423074	G G	C C	1	a0001c0001t0014g0066 a0001c0001t0014g0066	1	NA18989.hp1 NA18989.hp1	intron_variant	MODIFIER	c.-25+39C>G c.-25+39C>G	THY1	ENSG00000154096.14	transcript	ENST00000284240.10	protein_coding	1/3	chr11	119423074

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 43)

GGenebody Level Haplotype Info (Total: 66)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 46)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 66)

Haplotype Details by Sample (Haploid Level) (Total: 384)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 46)

GGenebody Level Haplotype Variants (Intron) (Total: 35)

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Annotation (Repeats)

Annotation (SNP Array)