Item | Value |
---|---|
geneid | 729355 |
ensemblid | ENSG00000261509.7 |
hgncid | 37202 |
symbol | TP53TG3B |
name | TP53 target 3B |
refseq_nuc | NM_001099687.4 |
refseq_prot | NP_001093157.1 |
ensembl_nuc | ENST00000341305.7 |
ensembl_prot | ENSP00000339405.5 |
mane_status | MANE Select |
chr | chr16 |
start | 33360841 |
end | 33363478 |
strand | + |
ver | v1.2 |
region | chr16:33360841-33363478 |
region5000 | chr16:33355841-33368478 |
regionname0 | TP53TG3B_chr16_33360841_33363478 |
regionname5000 | TP53TG3B_chr16_33355841_33368478 |
achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001 | 0/0 | 372 | 46 | 10 | 10 | 16 | 4 | 6 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | ATGCG others(367): Show |
chr16 | 33355841 | 33368478 |
acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001 | 0/0 | 1467 | 45 | 9 | 10 | 16 | 4 | 6 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | TCCTC others(1462): Show |
chr16 | 33355841 | 33368478 |
a0001c0001t0002 | 0/0 | 1467 | 1 | 1 | 0 | 0 | 0 | 0 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | TCCTC others(1462): Show |
chr16 | 33355841 | 33368478 |
actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001g0001 | 0/0 | 40 | 8 | 10 | 12 | 4 | 6 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
a0001c0001t0001g0002 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
a0001c0001t0001g0003 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
a0001c0001t0001g0004 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
a0001c0001t0001g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
a0001c0001t0002g0001 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG00140 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG00642 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG00642 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01069 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01261 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01261 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01515 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01952 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01952 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG01993 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02135 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02280 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02280 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02615 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02615 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02698 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02698 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02895 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02895 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG03669 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG03669 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG03834 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG03834 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18943 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18943 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18951 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18951 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18967 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18967 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18968 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18968 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18992 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA18992 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA19030 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA19030 | hp2 | a0001 | c0001 | t0001 | g0004 | AFR | LWK | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA19056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA19056 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA19090 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
NA19090 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02109 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
HG02109 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | ACB | TP53TG3B_chr16_33355841_33368478 | TP53TG3B | chr16 | 33355841 | 33368478 |
view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|
view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|
view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16:33363211 | T | C | 1 | a0001c0001t0002 | 1 | HG02109.hp2 | 3_prime_UTR_variant | MODIFIER | c.*757T>C | TP53TG3B | ENSG00000261509.7 | transcript | ENST00000341305.7 | protein_coding | 2/2 | 757 | chr16 | 33363211 |
view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16:33361662 | G | C | 1 | a0001c0001t0001g0003 | 1 | NA18951.hp1 | intron_variant | MODIFIER | c.362+392G>C | TP53TG3B | ENSG00000261509.7 | transcript | ENST00000341305.7 | protein_coding | 1/1 | chr16 | 33361662 | |||||||
chr16:33361771 | C | T | 1 | a0001c0001t0001g0002 | 2 | NA18968.hp2 NA19090.hp2 |
intron_variant | MODIFIER | c.362+501C>T | TP53TG3B | ENSG00000261509.7 | transcript | ENST00000341305.7 | protein_coding | 1/1 | chr16 | 33361771 | |||||||
chr16:33362246 | C | T | 1 | a0001c0001t0001g0005 | 1 | NA18967.hp2 | intron_variant | MODIFIER | c.363-196C>T | TP53TG3B | ENSG00000261509.7 | transcript | ENST00000341305.7 | protein_coding | 1/1 | chr16 | 33362246 | |||||||
chr16:33362349 | A | G | 1 | a0001c0001t0001g0004 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.363-93A>G | TP53TG3B | ENSG00000261509.7 | transcript | ENST00000341305.7 | protein_coding | 1/1 | chr16 | 33362349 |