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geneid	102724101
ensemblid	ENSG00000275034.3
hgncid	51816
symbol	TP53TG3E
name	TP53 target 3 family member E
refseq_nuc	NM_001330061.2
refseq_prot	NP_001316990.1
ensembl_nuc	ENST00000623491.2
ensembl_prot	ENSP00000485467.1
mane_status	MANE Select
chr	chr16
start	33304306
end	33306945
strand	+
ver	v1.2
region	chr16:33304306-33306945
region5000	chr16:33299306-33311945
regionname0	TP53TG3E_chr16_33304306_33306945
regionname5000	TP53TG3E_chr16_33299306_33311945

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	124	42	12	14	6	6	4	4	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	375	41	12	14	6	5	4	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
c0002	0/0	375	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1100	25	8	6	4	5	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
t0002	0/0	1095	13	1	7	2	1	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
t0003	0/0	1100	2	2	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
t0004	0/0	1101	1	1	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
t0005	0/0	1101	1	0	1	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	40	11	13	6	6	4	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
g0002	0/0	1	1	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
g0003	0/0	1	0	1	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	375	41	12	14	6	5	4	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
a0001c0002	0/0	375	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1474	24	8	6	4	4	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
a0001c0001t0002	0/0	1469	13	1	7	2	1	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
a0001c0001t0003	0/0	1474	2	2	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
a0001c0001t0004	0/0	1475	1	1	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
a0001c0001t0005	0/0	1475	1	0	1	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945
a0001c0002t0001	0/0	1474	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	copy fasta	chr16	33299306	33311945

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	24	8	6	4	4	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0002g0001	0/0	13	1	7	2	1	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0003g0001	0/0	2	2	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0004g0002	0/0	1	1	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0005g0003	0/0	1	0	1	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0002t0001g0001	0/0	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0001	EUR	GBR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00323	hp1	a0001	c0002	t0001	g0001	EUR	FIN	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00735	hp1	a0001	c0001	t0005	g0003	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00735	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01070	hp1	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01070	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01074	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01106	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01169	hp1	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01169	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02622	hp1	a0001	c0001	t0004	g0002	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02896	hp1	a0001	c0001	t0003	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02896	hp2	a0001	c0001	t0002	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04204	hp2	a0001	c0001	t0002	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04228	hp2	a0001	c0001	t0002	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18522	hp2	a0001	c0001	t0003	g0001	AFR	YRI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18944	hp1	a0001	c0001	t0002	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18944	hp2	a0001	c0001	t0002	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr16:33304466	C C	T T	1	a0001c0002 a0001c0002	1	HG00323.hp1 HG00323.hp1	synonymous_variant	LOW	c.93C>T c.93C>T	p.Thr31Thr p.Thr31Thr	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/2	161/1469	93/375	31/124			chr16	33304466

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr16:33306161	C C	A A	1	a0001c0001t0004 a0001c0001t0004	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.242C>A c.242C>A	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	242		chr16	33306161
chr16:33306255	T T	C C	1	a0001c0001t0004 a0001c0001t0004	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.336T>C c.336T>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	336		chr16	33306255
chr16:33306361	A A	G G	1	a0001c0001t0003 a0001c0001t0003	2	HG02896.hp1 NA18522.hp2 HG02896.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.442A>G c.442A>G	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	442		chr16	33306361
chr16:33306386	C C	G G	1	a0001c0001t0004 a0001c0001t0004	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.467C>G c.467C>G	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	467		chr16	33306386
chr16:33306409	T T	TCTCTC TCTCTC	5	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0002t0001	29	HG00099.hp2 HG00323.hp1 HG00323.hp2 others(26): Show HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00735.hp1 HG01069.hp1 HG01069.hp2 HG01074.hp1 HG01106.hp1 HG01255.hp1 HG01255.hp2 HG02055.hp1 HG02055.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02896.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18952.hp1 NA18952.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.494_498dupTCCTC c.494_498dupTCCTC	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	499	INFO_REALIGN_3_PRIME	chr16	33306409
chr16:33306466	A A	AT AT	2	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	2	HG00735.hp1 HG02622.hp1 HG00735.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.551dupT c.551dupT	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	552	INFO_REALIGN_3_PRIME	chr16	33306466
chr16:33306709	A A	C C	1	a0001c0001t0005 a0001c0001t0005	1	HG00735.hp1 HG00735.hp1	3_prime_UTR_variant	MODIFIER	c.790A>C c.790A>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	790		chr16	33306709

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr16:33304957	G G	A A	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+222G>A c.362+222G>A	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33304957
chr16:33304989	C C	T T	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+254C>T c.362+254C>T	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33304989
chr16:33305035	G G	C C	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+300G>C c.362+300G>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305035
chr16:33305157	G G	T T	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+422G>T c.362+422G>T	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305157
chr16:33305451	G G	A A	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.363-456G>A c.363-456G>A	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305451
chr16:33305660	T T	G G	1	a0001c0001t0005g0003 a0001c0001t0005g0003	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.363-247T>G c.363-247T>G	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305660
chr16:33305661	C C	T T	1	a0001c0001t0005g0003 a0001c0001t0005g0003	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.363-246C>T c.363-246C>T	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305661
chr16:33305662	T T	C C	1	a0001c0001t0005g0003 a0001c0001t0005g0003	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.363-245T>C c.363-245T>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305662

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🧬 JoGo Online Haplotype Explorer TP53TG3E_chr16_33299306_33311945

JoGo Local Haplotype Explorer (on iGV) TP53TG3E_chr16_33299306_33311945

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 2)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 3)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 2)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 6)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 6)

Haplotype Details by Sample (Haploid Level) (Total: 42)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 7)

GGenebody Level Haplotype Variants (Intron) (Total: 8)

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Annotation (Repeats)

Annotation (SNP Array)