Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	102724101
ensemblid	ENSG00000275034.3
hgncid	51816
symbol	TP53TG3E
name	TP53 target 3 family member E
refseq_nuc	NM_001330061.2
refseq_prot	NP_001316990.1
ensembl_nuc	ENST00000623491.2
ensembl_prot	ENSP00000485467.1
mane_status	MANE Select
chr	chr16
start	33304306
end	33306945
strand	+
ver	v1.2
region	chr16:33304306-33306945
region5000	chr16:33299306-33311945
regionname0	TP53TG3E_chr16_33304306_33306945
regionname5000	TP53TG3E_chr16_33299306_33311945

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	124	42	12	14	6	6	4	4	TP53TG3E_chr16_33299306_33311945	TP53TG3E	MRASP others(119): Show MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSP AVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSL IPCRSTKGRWPLTASAAGLSSFSG	chr16	33299306	33311945

achapid	grch38/ chm13v2	alen	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aseq	cseq	chr	start	end
a0001c0001	0/0		372	41	12	14	6	5	4	TP53TG3E_chr16_33299306_33311945	TP53TG3E		ATGCG others(367): Show ATGCGCGCCTCACCCTGCATCTCCCAGCCCGCAGCCAGCTGGCATCCTAG ACCCTCTGCCCTGCGACCAACAGCCGGGAGCGGACCAGACACCAGAACTC CCGGAACGGTTGAAGACGGTTCCGCTCCCTGTCCCGCCTTTCGCAGCCCA GCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTGTTTCCAAATCTCTCCTGC TGAAGAGACATTGGAGCTAGGGCGGCTAGTTTCACCTGGTAATTGTGACA CCCTGTCTCCTCGAGCTGCAGGCTTTTATGCTTGTCATGTTCGAAGTTTG ATACCTTGCAGATCAACAAAGGGCCGGTGGCCTCTCACTGCCTCCGCGGC AGGGTTGTCAAGTTTTTCAGGT	chr16	33299306	33311945
a0001c0002	0/0		372	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E		ATGCG others(367): Show ATGCGCGCCTCACCCTGCATCTCCCAGCCCGCAGCCAGCTGGCATCCTAG ACCCTCTGCCCTGCGACCAACAGCCGGGAGCGGACCAGACACTAGAACTC CCGGAACGGTTGAAGACGGTTCCGCTCCCTGTCCCGCCTTTCGCAGCCCA GCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTGTTTCCAAATCTCTCCTGC TGAAGAGACATTGGAGCTAGGGCGGCTAGTTTCACCTGGTAATTGTGACA CCCTGTCTCCTCGAGCTGCAGGCTTTTATGCTTGTCATGTTCGAAGTTTG ATACCTTGCAGATCAACAAAGGGCCGGTGGCCTCTCACTGCCTCCGCGGC AGGGTTGTCAAGTTTTTCAGGT	chr16	33299306	33311945

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1474	24	8	6	4	4	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	TCCTC others(1469): Show TCCTCCTGTAGCCCCACCATCCACCGTGGGGAACGGTGGAGAGACTACAA CTCCCAGTATGCACCGCGATGCGCGCCTCACCCTGCATCTCCCAGCCCGC AGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAACAGCCGGGAGCG GACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGT CCCGCCTTTCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTG TTTCCAAATCTCTCCTGCTGAAGAGACATTGGAGCTAGGGCGGCTAGTTT CACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCT TGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCC TCTCACTGCCTCCGCGGCAGGGTTGTCAAGTTTTTCAGGTTAAGTACTGC ACGACTACTCGCTTCTGAAACTGATAGACACTGCCTCAGCTCCGTGCAGG GCAGACGCACAAGAGCAGAATCTCCGTGGGACATCTCTCTGGAGCATCAA TATTACTGCAGTATTTGGAAGAAACAAATTTAAATAAGTTCTAAGGTGAA GAATGGAACATTTAAGACAAGTCTGGAAAGTCATCTGCCTTTAATAACTG TCGTTTGTCCTTAACGTCAGACTTTCTCCAAGACCAAAACTCTAAGAACT TATTTCCATTCTTACAAATAGTAAAAATGATAAATCATATCAAGTCAATT GAAAGTCCTGCCTGCTGCTTTCCTAAATTGCAATATGGCCTTGGTATGGT TTTATTTGTACTTTTGTGGGGGATTCGTGGATCTTTAGATTAAAAAAAAA AAAATAGGTTTTTGAACAATTTTTGCAAGTTTGCAGCTGTTAGTTATTGA TTTATTTTTCCAACCCATCTAATTCTTCTGTCTCTCTCCTCTCCTCAGGC TCAATAATTCCATGGGTCTCTAAGGCTGTGTTTATTTTCTTTAAATTTTG TTGATTTACTTTTATACTCCATTTGATTTTTTCTATCTCTCACCTTTTCT CAGACTCAGTCATCCCACAGGTCTGTAAGGCTCTGTTCATTTTCTTTAAA CTTCTTTTTTTTTTCCTCTCCTCAGATTGGATAAATTATATTGCTATGTC TCTGTTTCTGAACTATAGAAAAGCTCAAAATTATTATTTTTATTTCTCAT TTTTTATATGGCTATTTTTTCTCTGCTGATGTTTCACATCTATTCATTTA TGAGAATATTTTCCTTTGCCCTCATGAGCGTGTTTATAATAGCTGCCTTC AAATTCTTGTCTGCCGTTTACATCTTGGACATCTTGGAGATGGCTACTGC CTGCTTTTTATCTTGTGTATTTATTACATTTTCACGTGTCTTCACGCATC CCTTGAATTGGAAATTGTGCCCTGGAGACTGTATACAAGACTGGATTAAA AAGACTGGATTCTGTTTTGTCCCT	chr16	33299306	33311945
a0001c0001t0002	0/0	1469	13	1	7	2	1	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	TCCTC others(1464): Show TCCTCCTGTAGCCCCACCATCCACCGTGGGGAACGGTGGAGAGACTACAA CTCCCAGTATGCACCGCGATGCGCGCCTCACCCTGCATCTCCCAGCCCGC AGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAACAGCCGGGAGCG GACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGT CCCGCCTTTCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTG TTTCCAAATCTCTCCTGCTGAAGAGACATTGGAGCTAGGGCGGCTAGTTT CACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCT TGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCC TCTCACTGCCTCCGCGGCAGGGTTGTCAAGTTTTTCAGGTTAAGTACTGC ACGACTACTCGCTTCTGAAACTGATAGACACTGCCTCAGCTCCGTGCAGG GCAGACGCACAAGAGCAGAATCTCCGTGGGACATCTCTCTGGAGCATCAA TATTACTGCAGTATTTGGAAGAAACAAATTTAAATAAGTTCTAAGGTGAA GAATGGAACATTTAAGACAAGTCTGGAAAGTCATCTGCCTTTAATAACTG TCGTTTGTCCTTAACGTCAGACTTTCTCCAAGACCAAAACTCTAAGAACT TATTTCCATTCTTACAAATAGTAAAAATGATAAATCATATCAAGTCAATT GAAAGTCCTGCCTGCTGCTTTCCTAAATTGCAATATGGCCTTGGTATGGT TTTATTTGTACTTTTGTGGGGGATTCGTGGATCTTTAGATTAAAAAAAAA AAAATAGGTTTTTGAACAATTTTTGCAAGTTTGCAGCTGTTAGTTATTGA TTTATTTTTCCAACCCATCTAATTCTTCTGTCTCTCTCCTCAGGCTCAAT AATTCCATGGGTCTCTAAGGCTGTGTTTATTTTCTTTAAATTTTGTTGAT TTACTTTTATACTCCATTTGATTTTTTCTATCTCTCACCTTTTCTCAGAC TCAGTCATCCCACAGGTCTGTAAGGCTCTGTTCATTTTCTTTAAACTTCT TTTTTTTTTCCTCTCCTCAGATTGGATAAATTATATTGCTATGTCTCTGT TTCTGAACTATAGAAAAGCTCAAAATTATTATTTTTATTTCTCATTTTTT ATATGGCTATTTTTTCTCTGCTGATGTTTCACATCTATTCATTTATGAGA ATATTTTCCTTTGCCCTCATGAGCGTGTTTATAATAGCTGCCTTCAAATT CTTGTCTGCCGTTTACATCTTGGACATCTTGGAGATGGCTACTGCCTGCT TTTTATCTTGTGTATTTATTACATTTTCACGTGTCTTCACGCATCCCTTG AATTGGAAATTGTGCCCTGGAGACTGTATACAAGACTGGATTAAAAAGAC TGGATTCTGTTTTGTCCCT	chr16	33299306	33311945
a0001c0001t0003	0/0	1474	2	2	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	TCCTC others(1469): Show TCCTCCTGTAGCCCCACCATCCACCGTGGGGAACGGTGGAGAGACTACAA CTCCCAGTATGCACCGCGATGCGCGCCTCACCCTGCATCTCCCAGCCCGC AGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAACAGCCGGGAGCG GACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGT CCCGCCTTTCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTG TTTCCAAATCTCTCCTGCTGAAGAGACATTGGAGCTAGGGCGGCTAGTTT CACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCT TGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCC TCTCACTGCCTCCGCGGCAGGGTTGTCAAGTTTTTCAGGTTAAGTACTGC ACGACTACTCGCTTCTGAAACTGATAGACACTGCCTCAGCTCCGTGCAGG GCAGACGCACAAGAGCAGAATCTCCGTGGGACATCTCTCTGGAGCATCAA TATTACTGCAGTATTTGGAAGAAACAAATTTAAATAAGTTCTAAGGTGAA GAATGGAACATTTAAGACAAGTCTGGAAAGTCATCTGCCTTTAATAACTG TCGTTTGTCCTTAACGTCAGACTTTCTCCAAGACCAAAACTCTAAGAACT TATTTCCATTCTTACAAATAGTAAAAATGATAAATCATATCAAGTCAATT GAAAGTCCTGCCTGCTGCTTTCCTAAATTGCAATATGGCCTTGGTATGGT TTTATTTGTACTTTTGTGGGGGATTCGTGGATCTTTAGATTAAAAAAAAA AAAATAGGTTTTTGAACAATTTTTGCAAGTTTGCGGCTGTTAGTTATTGA TTTATTTTTCCAACCCATCTAATTCTTCTGTCTCTCTCCTCTCCTCAGGC TCAATAATTCCATGGGTCTCTAAGGCTGTGTTTATTTTCTTTAAATTTTG TTGATTTACTTTTATACTCCATTTGATTTTTTCTATCTCTCACCTTTTCT CAGACTCAGTCATCCCACAGGTCTGTAAGGCTCTGTTCATTTTCTTTAAA CTTCTTTTTTTTTTCCTCTCCTCAGATTGGATAAATTATATTGCTATGTC TCTGTTTCTGAACTATAGAAAAGCTCAAAATTATTATTTTTATTTCTCAT TTTTTATATGGCTATTTTTTCTCTGCTGATGTTTCACATCTATTCATTTA TGAGAATATTTTCCTTTGCCCTCATGAGCGTGTTTATAATAGCTGCCTTC AAATTCTTGTCTGCCGTTTACATCTTGGACATCTTGGAGATGGCTACTGC CTGCTTTTTATCTTGTGTATTTATTACATTTTCACGTGTCTTCACGCATC CCTTGAATTGGAAATTGTGCCCTGGAGACTGTATACAAGACTGGATTAAA AAGACTGGATTCTGTTTTGTCCCT	chr16	33299306	33311945
a0001c0001t0004	0/0	1475	1	1	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	TCCTC others(1470): Show TCCTCCTGTAGCCCCACCATCCACCGTGGGGAACGGTGGAGAGACTACAA CTCCCAGTATGCACCGCGATGCGCGCCTCACCCTGCATCTCCCAGCCCGC AGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAACAGCCGGGAGCG GACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGT CCCGCCTTTCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTG TTTCCAAATCTCTCCTGCTGAAGAGACATTGGAGCTAGGGCGGCTAGTTT CACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCT TGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCC TCTCACTGCCTCCGCGGCAGGGTTGTCAAGTTTTTCAGGTTAAGTACTGC ACGACTACTCGCTTCTGAAACTGATAGACACTGCCTCAGCTCCGTGCAGG GCAGACGCACAAGAGCAGAATCTCCGTGGGACATCTCTCTGGAGCATCAA TATTACTGCAGTATTTGGAAGAAACAAATTTAAATAAGTTCTAAGGTGAA GAATGGAACATTTAAGACAAGTCTGGAAAGTCATCTGCCTTTAATAACTG TCGTTTGTCCTTAACGTCAGACTTTCTCCAAGACAAAAACTCTAAGAACT TATTTCCATTCTTACAAATAGTAAAAATGATAAATCATATCAAGTCAATT GAAAGTCCTGCCTGCTGCTTTCCTAAATCGCAATATGGCCTTGGTATGGT TTTATTTGTACTTTTGTGGGGGATTCGTGGATCTTTAGATTAAAAAAAAA AAAATAGGTTTTTGAACAATTTTTGCAAGTTTGCAGCTGTTAGTTATTGA TTTATTTTTGCAACCCATCTAATTCTTCTGTCTCTCTCCTCTCCTCAGGC TCAATAATTCCATGGGTCTCTAAGGCTGTGTTTATTTTCTTTAAATTTTT GTTGATTTACTTTTATACTCCATTTGATTTTTTCTATCTCTCACCTTTTC TCAGACTCAGTCATCCCACAGGTCTGTAAGGCTCTGTTCATTTTCTTTAA ACTTCTTTTTTTTTTCCTCTCCTCAGATTGGATAAATTATATTGCTATGT CTCTGTTTCTGAACTATAGAAAAGCTCAAAATTATTATTTTTATTTCTCA TTTTTTATATGGCTATTTTTTCTCTGCTGATGTTTCACATCTATTCATTT ATGAGAATATTTTCCTTTGCCCTCATGAGCGTGTTTATAATAGCTGCCTT CAAATTCTTGTCTGCCGTTTACATCTTGGACATCTTGGAGATGGCTACTG CCTGCTTTTTATCTTGTGTATTTATTACATTTTCACGTGTCTTCACGCAT CCCTTGAATTGGAAATTGTGCCCTGGAGACTGTATACAAGACTGGATTAA AAAGACTGGATTCTGTTTTGTCCCT	chr16	33299306	33311945
a0001c0001t0005	0/0	1475	1	0	1	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	TCCTC others(1470): Show TCCTCCTGTAGCCCCACCATCCACCGTGGGGAACGGTGGAGAGACTACAA CTCCCAGTATGCACCGCGATGCGCGCCTCACCCTGCATCTCCCAGCCCGC AGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAACAGCCGGGAGCG GACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGT CCCGCCTTTCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTG TTTCCAAATCTCTCCTGCTGAAGAGACATTGGAGCTAGGGCGGCTAGTTT CACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCT TGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCC TCTCACTGCCTCCGCGGCAGGGTTGTCAAGTTTTTCAGGTTAAGTACTGC ACGACTACTCGCTTCTGAAACTGATAGACACTGCCTCAGCTCCGTGCAGG GCAGACGCACAAGAGCAGAATCTCCGTGGGACATCTCTCTGGAGCATCAA TATTACTGCAGTATTTGGAAGAAACAAATTTAAATAAGTTCTAAGGTGAA GAATGGAACATTTAAGACAAGTCTGGAAAGTCATCTGCCTTTAATAACTG TCGTTTGTCCTTAACGTCAGACTTTCTCCAAGACCAAAACTCTAAGAACT TATTTCCATTCTTACAAATAGTAAAAATGATAAATCATATCAAGTCAATT GAAAGTCCTGCCTGCTGCTTTCCTAAATTGCAATATGGCCTTGGTATGGT TTTATTTGTACTTTTGTGGGGGATTCGTGGATCTTTAGATTAAAAAAAAA AAAATAGGTTTTTGAACAATTTTTGCAAGTTTGCAGCTGTTAGTTATTGA TTTATTTTTCCAACCCATCTAATTCTTCTGTCTCTCTCCTCTCCTCAGGC TCAATAATTCCATGGGTCTCTAAGGCTGTGTTTATTTTCTTTAAATTTTT GTTGATTTACTTTTATACTCCATTTGATTTTTTCTATCTCTCACCTTTTC TCAGACTCAGTCATCCCACAGGTCTGTAAGGCTCTGTTCATTTTCTTTAA ACTTCTTTTTTTTTTCCTCTCCTCAGATTGGATAAATTATATTGCTATGT CTCTGTTTCTGAACTATAGAAAAGCTCAAAATTATTATTTTTATTTCTCA TTTTTTATATGGCTATTTTTTCTCTGCTGATGTTTCACCTCTATTCATTT ATGAGAATATTTTCCTTTGCCCTCATGAGCGTGTTTATAATAGCTGCCTT CAAATTCTTGTCTGCCGTTTACATCTTGGACATCTTGGAGATGGCTACTG CCTGCTTTTTATCTTGTGTATTTATTACATTTTCACGTGTCTTCACGCAT CCCTTGAATTGGAAATTGTGCCCTGGAGACTGTATACAAGACTGGATTAA AAAGACTGGATTCTGTTTTGTCCCT	chr16	33299306	33311945
a0001c0002t0001	0/0	1474	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	TCCTC others(1469): Show TCCTCCTGTAGCCCCACCATCCACCGTGGGGAACGGTGGAGAGACTACAA CTCCCAGTATGCACCGCGATGCGCGCCTCACCCTGCATCTCCCAGCCCGC AGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAACAGCCGGGAGCG GACCAGACACTAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGT CCCGCCTTTCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTG TTTCCAAATCTCTCCTGCTGAAGAGACATTGGAGCTAGGGCGGCTAGTTT CACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCT TGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCC TCTCACTGCCTCCGCGGCAGGGTTGTCAAGTTTTTCAGGTTAAGTACTGC ACGACTACTCGCTTCTGAAACTGATAGACACTGCCTCAGCTCCGTGCAGG GCAGACGCACAAGAGCAGAATCTCCGTGGGACATCTCTCTGGAGCATCAA TATTACTGCAGTATTTGGAAGAAACAAATTTAAATAAGTTCTAAGGTGAA GAATGGAACATTTAAGACAAGTCTGGAAAGTCATCTGCCTTTAATAACTG TCGTTTGTCCTTAACGTCAGACTTTCTCCAAGACCAAAACTCTAAGAACT TATTTCCATTCTTACAAATAGTAAAAATGATAAATCATATCAAGTCAATT GAAAGTCCTGCCTGCTGCTTTCCTAAATTGCAATATGGCCTTGGTATGGT TTTATTTGTACTTTTGTGGGGGATTCGTGGATCTTTAGATTAAAAAAAAA AAAATAGGTTTTTGAACAATTTTTGCAAGTTTGCAGCTGTTAGTTATTGA TTTATTTTTCCAACCCATCTAATTCTTCTGTCTCTCTCCTCTCCTCAGGC TCAATAATTCCATGGGTCTCTAAGGCTGTGTTTATTTTCTTTAAATTTTG TTGATTTACTTTTATACTCCATTTGATTTTTTCTATCTCTCACCTTTTCT CAGACTCAGTCATCCCACAGGTCTGTAAGGCTCTGTTCATTTTCTTTAAA CTTCTTTTTTTTTTCCTCTCCTCAGATTGGATAAATTATATTGCTATGTC TCTGTTTCTGAACTATAGAAAAGCTCAAAATTATTATTTTTATTTCTCAT TTTTTATATGGCTATTTTTTCTCTGCTGATGTTTCACATCTATTCATTTA TGAGAATATTTTCCTTTGCCCTCATGAGCGTGTTTATAATAGCTGCCTTC AAATTCTTGTCTGCCGTTTACATCTTGGACATCTTGGAGATGGCTACTGC CTGCTTTTTATCTTGTGTATTTATTACATTTTCACGTGTCTTCACGCATC CCTTGAATTGGAAATTGTGCCCTGGAGACTGTATACAAGACTGGATTAAA AAGACTGGATTCTGTTTTGTCCCT	chr16	33299306	33311945

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	24	8	6	4	4	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0002g0001	0/0	13	1	7	2	1	2	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0003g0001	0/0	2	2	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0004g0002	0/0	1	1	0	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0001t0005g0003	0/0	1	0	1	0	0	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
a0001c0002t0001g0001	0/0	1	0	0	0	1	0	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0001	EUR	GBR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00323	hp1	a0001	c0002	t0001	g0001	EUR	FIN	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00735	hp1	a0001	c0001	t0005	g0003	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG00735	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01070	hp1	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01070	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01074	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01106	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01169	hp1	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01169	hp2	a0001	c0001	t0002	g0001	AMR	PUR	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02622	hp1	a0001	c0001	t0004	g0002	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02896	hp1	a0001	c0001	t0003	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG02896	hp2	a0001	c0001	t0002	g0001	AFR	GWD	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04204	hp2	a0001	c0001	t0002	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
HG04228	hp2	a0001	c0001	t0002	g0001	SAS	STU	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18522	hp2	a0001	c0001	t0003	g0001	AFR	YRI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18944	hp1	a0001	c0001	t0002	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18944	hp2	a0001	c0001	t0002	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	TP53TG3E_chr16_33299306_33311945	TP53TG3E	chr16	33299306	33311945

view	chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

view	chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chr16:33304466	C C	T T	1	a0001c0002 a0001c0002	1	HG00323.hp1 HG00323.hp1	synonymous_variant	LOW	c.93C>T c.93C>T	p.Thr31Thr p.Thr31Thr	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/2	161/1469	93/375	31/124			chr16	33304466

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr16:33306161	C C	A A	1	a0001c0001t0004 a0001c0001t0004	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.242C>A c.242C>A	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	242		chr16	33306161
chr16:33306255	T T	C C	1	a0001c0001t0004 a0001c0001t0004	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.336T>C c.336T>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	336		chr16	33306255
chr16:33306361	A A	G G	1	a0001c0001t0003 a0001c0001t0003	2	HG02896.hp1 NA18522.hp2 HG02896.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.442A>G c.442A>G	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	442		chr16	33306361
chr16:33306386	C C	G G	1	a0001c0001t0004 a0001c0001t0004	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.467C>G c.467C>G	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	467		chr16	33306386
chr16:33306409	T T	TCTCTC TCTCTC	5	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0002t0001	29	HG00099.hp2 HG00323.hp1 HG00323.hp2 others(26): Show HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00735.hp1 HG01069.hp1 HG01069.hp2 HG01074.hp1 HG01106.hp1 HG01255.hp1 HG01255.hp2 HG02055.hp1 HG02055.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02896.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18952.hp1 NA18952.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.494_498dupTCCTC c.494_498dupTCCTC	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	499	INFO_REALIGN_3_PRIME	chr16	33306409
chr16:33306466	A A	AT AT	2	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	2	HG00735.hp1 HG02622.hp1 HG00735.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.551dupT c.551dupT	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	552	INFO_REALIGN_3_PRIME	chr16	33306466
chr16:33306709	A A	C C	1	a0001c0001t0005 a0001c0001t0005	1	HG00735.hp1 HG00735.hp1	3_prime_UTR_variant	MODIFIER	c.790A>C c.790A>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	2/2	790		chr16	33306709

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr16:33304957	G G	A A	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+222G>A c.362+222G>A	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33304957
chr16:33304989	C C	T T	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+254C>T c.362+254C>T	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33304989
chr16:33305035	G G	C C	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+300G>C c.362+300G>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305035
chr16:33305157	G G	T T	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.362+422G>T c.362+422G>T	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305157
chr16:33305451	G G	A A	1	a0001c0001t0004g0002 a0001c0001t0004g0002	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.363-456G>A c.363-456G>A	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305451
chr16:33305660	T T	G G	1	a0001c0001t0005g0003 a0001c0001t0005g0003	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.363-247T>G c.363-247T>G	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305660
chr16:33305661	C C	T T	1	a0001c0001t0005g0003 a0001c0001t0005g0003	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.363-246C>T c.363-246C>T	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305661
chr16:33305662	T T	C C	1	a0001c0001t0005g0003 a0001c0001t0005g0003	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.363-245T>C c.363-245T>C	TP53TG3E	ENSG00000275034.3	transcript	ENST00000623491.2	protein_coding	1/1	chr16	33305662

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TP53TG3E_chr16_33299306_33311945 Genic Haplotype Structure on iGV

Translation Multiple Alignment View

Gene Summary (with MANE)

Amino acid(protein) Level Haplotype Info (Total: 1)

Coding Level Haplotype Info (Total: 2)

Transcript Level Haplotype Info (Total: 6)

Genebody Level Haplotype Info (Total: 6)

Haplotype Details by Sample (Haploid Level) (Total: 42)

Amino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

Coding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

Transcript Level Haplotype Variants (Exon) (Total: 7)

Genebody Level Haplotype Variants (Intron) (Total: 8)

Annotation (Repeats)

Annotation (SNP Array)