Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 642612 |
| ensemblid | ENSG00000204449.3 |
| hgncid | 38877 |
| symbol | TRIM49C |
| name | tripartite motif containing 49C |
| refseq_nuc | NM_001195234.1 |
| refseq_prot | NP_001182163.1 |
| ensembl_nuc | ENST00000448984.1 |
| ensembl_prot | ENSP00000388299.1 |
| mane_status | MANE Select |
| chr | chr11 |
| start | 90031106 |
| end | 90042025 |
| strand | + |
| ver | v1.2 |
| region | chr11:90031106-90042025 |
| region5000 | chr11:90026106-90047025 |
| regionname0 | TRIM49C_chr11_90031106_90042025 |
| regionname5000 | TRIM49C_chr11_90026106_90047025 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 452 | 104 | 6 | 17 | 60 | 8 | 11 | 45 | TRIM49C_chr11_90026106_90047025 | TRIM49C | MNSGI others(447): Show |
chr11 | 90026106 | 90047025 |
| a0002 | 0/0 | 452 | 10 | 2 | 2 | 3 | 0 | 3 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | MNSGI others(447): Show |
chr11 | 90026106 | 90047025 |
| a0003 | 0/0 | 452 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | MNSGI others(447): Show |
chr11 | 90026106 | 90047025 |
| a0004 | 0/0 | 452 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | MNSGI others(447): Show |
chr11 | 90026106 | 90047025 |
| a0005 | 0/0 | 452 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | MNSGI others(447): Show |
chr11 | 90026106 | 90047025 |
| a0006 | 0/0 | 452 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | MNSGI others(447): Show |
chr11 | 90026106 | 90047025 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 1356 | 97 | 6 | 13 | 60 | 7 | 9 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 | ||
| a0001c0003 | 0/0 | 1356 | 7 | 0 | 4 | 0 | 1 | 2 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 | ||
| a0002c0002 | 0/0 | 1356 | 10 | 2 | 2 | 3 | 0 | 3 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 | ||
| a0003c0004 | 0/0 | 1356 | 3 | 0 | 3 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 | ||
| a0004c0006 | 0/0 | 1356 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 | ||
| a0005c0005 | 0/0 | 1356 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 | ||
| a0006c0007 | 0/0 | 1356 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | ATGAA others(1351): Show |
chr11 | 90026106 | 90047025 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 2163 | 95 | 6 | 13 | 58 | 7 | 9 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0001c0001t0005 | 0/0 | 2163 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0001c0001t0006 | 0/0 | 2163 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0001c0003t0001 | 0/0 | 2163 | 6 | 0 | 3 | 0 | 1 | 2 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0001c0003t0004 | 0/0 | 2163 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0002c0002t0002 | 0/0 | 2163 | 9 | 2 | 1 | 3 | 0 | 3 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0002c0002t0007 | 0/0 | 2163 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0003c0004t0001 | 0/0 | 2163 | 3 | 0 | 3 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0004c0006t0003 | 0/0 | 2163 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0005c0005t0001 | 0/0 | 2163 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| a0006c0007t0001 | 0/0 | 2163 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | CTAAT others(2158): Show |
chr11 | 90026106 | 90047025 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/1 | 38 | 4 | 6 | 18 | 6 | 3 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0002 | 0/0 | 17 | 0 | 2 | 14 | 0 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0003 | 0/0 | 9 | 1 | 2 | 6 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0006 | 0/0 | 3 | 0 | 0 | 0 | 1 | 2 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0007 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0008 | 0/0 | 2 | 0 | 0 | 1 | 0 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0010 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0011 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0012 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0018 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0020 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0024 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0028 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0029 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0030 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0034 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0005g0002 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0001t0006g0002 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0003t0001g0003 | 0/0 | 5 | 0 | 3 | 0 | 1 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0003t0001g0021 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0001c0003t0004g0003 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0002c0002t0002g0004 | 0/0 | 4 | 1 | 0 | 1 | 0 | 2 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0002c0002t0002g0009 | 0/0 | 2 | 0 | 0 | 1 | 0 | 1 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0002c0002t0002g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0002c0002t0002g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0002c0002t0002g0016 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0002c0002t0007g0004 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0003c0004t0001g0005 | 0/0 | 3 | 0 | 3 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0004c0006t0003g0013 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0005c0005t0001g0022 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| a0006c0007t0001g0007 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00099 | hp2 | a0001 | c0003 | t0001 | g0003 | EUR | GBR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0006 | EUR | FIN | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00280 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00408 | hp1 | a0001 | c0001 | t0001 | g0027 | EAS | CHS | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00408 | hp2 | a0001 | c0001 | t0005 | g0002 | EAS | CHS | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00544 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00639 | hp2 | a0004 | c0006 | t0003 | g0013 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00733 | hp1 | a0001 | c0003 | t0001 | g0003 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00733 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00735 | hp1 | a0001 | c0003 | t0001 | g0003 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00735 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00738 | hp2 | a0005 | c0005 | t0001 | g0022 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00741 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG00741 | hp2 | a0001 | c0003 | t0004 | g0003 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01071 | hp1 | a0001 | c0001 | t0001 | g0024 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01071 | hp2 | a0001 | c0003 | t0001 | g0003 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01099 | hp2 | a0002 | c0002 | t0007 | g0004 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01167 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01192 | hp1 | a0003 | c0004 | t0001 | g0005 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01192 | hp2 | a0002 | c0002 | t0002 | g0016 | AMR | PUR | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01258 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | CLM | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01515 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02004 | hp1 | a0003 | c0004 | t0001 | g0005 | AMR | PEL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02004 | hp2 | a0001 | c0001 | t0001 | g0018 | AMR | PEL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0017 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02056 | hp2 | a0002 | c0002 | t0002 | g0014 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02071 | hp2 | a0001 | c0001 | t0001 | g0031 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02074 | hp2 | a0002 | c0002 | t0002 | g0009 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02080 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02080 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0032 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02132 | hp2 | a0001 | c0001 | t0001 | g0025 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0010 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02135 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02145 | hp1 | a0002 | c0002 | t0002 | g0015 | AFR | ACB | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02145 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG02683 | hp2 | a0002 | c0002 | t0002 | g0004 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | MSL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03209 | hp2 | a0002 | c0002 | t0002 | g0004 | AFR | MSL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0006 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03490 | hp2 | a0001 | c0003 | t0001 | g0021 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03492 | hp1 | a0001 | c0003 | t0001 | g0003 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03492 | hp2 | a0001 | c0001 | t0001 | g0006 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03704 | hp1 | a0002 | c0002 | t0002 | g0009 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0030 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03710 | hp1 | a0002 | c0002 | t0002 | g0004 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03710 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03927 | hp1 | a0001 | c0001 | t0001 | g0008 | SAS | BEB | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG03927 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | STU | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG04199 | hp2 | a0001 | c0001 | t0001 | g0034 | SAS | STU | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18612 | hp1 | a0006 | c0007 | t0001 | g0007 | EAS | CHB | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18612 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18939 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18939 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0026 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18944 | hp2 | a0001 | c0001 | t0001 | g0019 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18947 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18947 | hp2 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18949 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18949 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18959 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18959 | hp2 | a0001 | c0001 | t0006 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18961 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18963 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18963 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18965 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18971 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18980 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18980 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18981 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18981 | hp2 | a0001 | c0001 | t0001 | g0010 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18993 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18993 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18994 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18994 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18997 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18997 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19030 | hp2 | a0001 | c0001 | t0001 | g0029 | AFR | LWK | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19054 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19054 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19059 | hp1 | a0001 | c0001 | t0001 | g0033 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19059 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19065 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19065 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19066 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19070 | hp2 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19078 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19078 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19087 | hp1 | a0002 | c0002 | t0002 | g0004 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19087 | hp2 | a0001 | c0001 | t0001 | g0023 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA19088 | hp2 | a0001 | c0001 | t0001 | g0028 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA20129 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ASW | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ASW | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA20752 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01123 | hp1 | a0003 | c0004 | t0001 | g0005 | AMR | CLM | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| HG01123 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| NA18955 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| homoSapiens | chm13v2 | a0001 | c0001 | t0001 | g0001 | REF | REF | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0020 | REF | REF | TRIM49C_chr11_90026106_90047025 | TRIM49C | chr11 | 90026106 | 90047025 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr11:90035342 | A | G | 1 | a0006 | 1 | NA18612.hp1 | missense_variant | MODERATE | c.131A>G | p.Gln44Arg | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/8 | 460/2163 | 131/1359 | 44/452 | chr11 | 90035342 | |||
| chr11:90035590 | C | T | 1 | a0003 | 3 | HG01123.hp1 HG01192.hp1 HG02004.hp1 |
missense_variant | MODERATE | c.379C>T | p.Arg127Cys | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/8 | 708/2163 | 379/1359 | 127/452 | chr11 | 90035590 | |||
| chr11:90041068 | C | G | 1 | a0004 | 1 | HG00639.hp2 | missense_variant | MODERATE | c.877C>G | p.His293Asp | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 1206/2163 | 877/1359 | 293/452 | chr11 | 90041068 | |||
| chr11:90041084 | G | A | 1 | a0005 | 1 | HG00738.hp2 | missense_variant | MODERATE | c.893G>A | p.Ser298Asn | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 1222/2163 | 893/1359 | 298/452 | chr11 | 90041084 | |||
| chr11:90041315 | A | C | 2 | a0002 a0005 |
11 | HG00738.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
missense_variant | MODERATE | c.1124A>C | p.Glu375Ala | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 1453/2163 | 1124/1359 | 375/452 | chr11 | 90041315 | |||
| chr11:90041338 | A | G | 2 | a0002 a0005 |
11 | HG00738.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
missense_variant | MODERATE | c.1147A>G | p.Ile383Val | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 1476/2163 | 1147/1359 | 383/452 | chr11 | 90041338 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr11:90035388 | A | C | 1 | a0004c0006 | 1 | HG00639.hp2 | synonymous_variant | LOW | c.177A>C | p.Thr59Thr | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/8 | 506/2163 | 177/1359 | 59/452 | chr11 | 90035388 | |||
| chr11:90035409 | C | T | 1 | a0001c0003 | 7 | HG00099.hp2 HG00733.hp1 HG00735.hp1 others(4): Show |
synonymous_variant | LOW | c.198C>T | p.Thr66Thr | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/8 | 527/2163 | 198/1359 | 66/452 | chr11 | 90035409 | |||
| chr11:90041229 | T | C | 1 | a0004c0006 | 1 | HG00639.hp2 | synonymous_variant | LOW | c.1038T>C | p.His346His | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 1367/2163 | 1038/1359 | 346/452 | chr11 | 90041229 | |||
| chr11:90041280 | G | A | 3 | a0002c0002 a0004c0006 a0005c0005 |
12 | HG00639.hp2 HG00738.hp2 HG01099.hp2 others(9): Show |
synonymous_variant | LOW | c.1089G>A | p.Lys363Lys | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 1418/2163 | 1089/1359 | 363/452 | chr11 | 90041280 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr11:90031195 | G | A | 1 | a0004c0006t0003 | 1 | HG00639.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-240G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/8 | chr11 | 90031195 | |||||||
| chr11:90031233 | C | T | 1 | a0004c0006t0003 | 1 | HG00639.hp2 | 5_prime_UTR_variant | MODIFIER | c.-202C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/8 | 3979 | chr11 | 90031233 | ||||||
| chr11:90032515 | C | T | 1 | a0004c0006t0003 | 1 | HG00639.hp2 | 5_prime_UTR_variant | MODIFIER | c.-72C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/8 | 2697 | chr11 | 90032515 | ||||||
| chr11:90041633 | A | G | 2 | a0002c0002t0002 a0002c0002t0007 |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
3_prime_UTR_variant | MODIFIER | c.*83A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 83 | chr11 | 90041633 | ||||||
| chr11:90041747 | T | C | 1 | a0001c0003t0004 | 1 | HG00741.hp2 | 3_prime_UTR_variant | MODIFIER | c.*197T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 197 | chr11 | 90041747 | ||||||
| chr11:90041850 | A | T | 2 | a0002c0002t0007 a0004c0006t0003 |
2 | HG00639.hp2 HG01099.hp2 |
3_prime_UTR_variant | MODIFIER | c.*300A>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 300 | chr11 | 90041850 | ||||||
| chr11:90041885 | C | G | 1 | a0004c0006t0003 | 1 | HG00639.hp2 | 3_prime_UTR_variant | MODIFIER | c.*335C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 335 | chr11 | 90041885 | ||||||
| chr11:90041932 | A | G | 2 | a0001c0001t0006 a0004c0006t0003 |
2 | HG00639.hp2 NA18959.hp2 |
3_prime_UTR_variant | MODIFIER | c.*382A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 382 | chr11 | 90041932 | ||||||
| chr11:90041957 | C | T | 1 | a0001c0001t0005 | 1 | HG00408.hp2 | 3_prime_UTR_variant | MODIFIER | c.*407C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 407 | chr11 | 90041957 | ||||||
| chr11:90042015 | T | G | 1 | a0004c0006t0003 | 1 | HG00639.hp2 | 3_prime_UTR_variant | MODIFIER | c.*465T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 8/8 | 465 | chr11 | 90042015 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr11:90031498 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-191+254T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90031498 | |||||||
| chr11:90031923 | C | T | 16 | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(13): Show |
37 | HG00408.hp2 HG00544.hp1 HG00544.hp2 others(34): Show |
intron_variant | MODIFIER | c.-190-474C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90031923 | |||||||
| chr11:90031960 | G | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-190-437G>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90031960 | |||||||
| chr11:90032018 | T | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-190-379T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90032018 | |||||||
| chr11:90032160 | A | G | 1 | a0001c0001t0001g0029 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.-190-237A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90032160 | |||||||
| chr11:90032238 | G | A | 2 | a0001c0001t0001g0006 a0004c0006t0003g0013 |
4 | HG00280.hp1 HG00639.hp2 HG03490.hp1 others(1): Show |
intron_variant | MODIFIER | c.-190-159G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90032238 | |||||||
| chr11:90032322 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-190-75T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 1/7 | chr11 | 90032322 | |||||||
| chr11:90032665 | T | G | 8 | a0001c0001t0001g0008 a0002c0002t0002g0004 a0002c0002t0002g0009 others(5): Show |
13 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(10): Show |
intron_variant | MODIFIER | c.-5+83T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90032665 | |||||||
| chr11:90033106 | T | A | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-5+524T>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033106 | |||||||
| chr11:90033408 | G | A | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-5+826G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033408 | |||||||
| chr11:90033420 | T | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-5+838T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033420 | |||||||
| chr11:90033460 | C | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-5+878C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033460 | |||||||
| chr11:90033488 | A | G | 1 | a0001c0001t0001g0028 | 1 | NA19088.hp2 | intron_variant | MODIFIER | c.-5+906A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033488 | |||||||
| chr11:90033661 | T | G | 3 | a0001c0001t0001g0017 a0002c0002t0002g0014 a0004c0006t0003g0013 |
3 | HG00639.hp2 HG02056.hp1 HG02056.hp2 |
intron_variant | MODIFIER | c.-5+1079T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033661 | |||||||
| chr11:90033687 | T | G | 2 | a0001c0001t0001g0018 a0004c0006t0003g0013 |
2 | HG00639.hp2 HG02004.hp2 |
intron_variant | MODIFIER | c.-5+1105T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033687 | |||||||
| chr11:90033957 | C | A | 1 | a0002c0002t0002g0015 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.-4-1251C>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033957 | |||||||
| chr11:90033957 | CA | C | 5 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(2): Show |
9 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(6): Show |
intron_variant | MODIFIER | c.-4-1240delA | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr11 | 90033957 | ||||||
| chr11:90033958 | A | C | 1 | a0002c0002t0002g0015 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.-4-1250A>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033958 | |||||||
| chr11:90033985 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-4-1223T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90033985 | |||||||
| chr11:90034156 | C | G | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.-4-1052C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034156 | |||||||
| chr11:90034165 | A | G | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.-4-1043A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034165 | |||||||
| chr11:90034178 | G | C | 1 | a0001c0001t0001g0030 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-4-1030G>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034178 | |||||||
| chr11:90034287 | G | A | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.-4-921G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034287 | |||||||
| chr11:90034565 | G | A | 2 | a0002c0002t0002g0016 a0004c0006t0003g0013 |
2 | HG00639.hp2 HG01192.hp2 |
intron_variant | MODIFIER | c.-4-643G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034565 | |||||||
| chr11:90034607 | C | CT | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.-4-594dupT | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr11 | 90034607 | ||||||
| chr11:90034615 | A | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-4-593A>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034615 | |||||||
| chr11:90034704 | A | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-4-504A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034704 | |||||||
| chr11:90034714 | G | A | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.-4-494G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034714 | |||||||
| chr11:90034816 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-4-392T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034816 | |||||||
| chr11:90034819 | A | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-4-389A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90034819 | |||||||
| chr11:90035012 | G | A | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.-4-196G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035012 | |||||||
| chr11:90035030 | T | G | 8 | a0001c0001t0001g0019 a0002c0002t0002g0004 a0002c0002t0002g0009 others(5): Show |
12 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(9): Show |
intron_variant | MODIFIER | c.-4-178T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035030 | |||||||
| chr11:90035137 | A | T | 1 | a0001c0001t0001g0017 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.-4-71A>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035137 | |||||||
| chr11:90035143 | C | G | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.-4-65C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035143 | |||||||
| chr11:90035158 | C | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.-4-50C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035158 | |||||||
| chr11:90035173 | G | A | 1 | a0001c0001t0001g0031 | 1 | HG02071.hp2 | intron_variant | MODIFIER | c.-4-35G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035173 | |||||||
| chr11:90035174 | G | T | 1 | a0001c0001t0001g0031 | 1 | HG02071.hp2 | intron_variant | MODIFIER | c.-4-34G>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035174 | |||||||
| chr11:90035192 | T | G | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.-4-16T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 2/7 | chr11 | 90035192 | |||||||
| chr11:90035645 | G | T | 25 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(22): Show |
86 | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(83): Show |
intron_variant | MODIFIER | c.411+23G>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/7 | chr11 | 90035645 | |||||||
| chr11:90035697 | A | G | 8 | a0001c0001t0001g0027 a0002c0002t0002g0004 a0002c0002t0002g0009 others(5): Show |
12 | HG00408.hp1 HG00639.hp2 HG01099.hp2 others(9): Show |
intron_variant | MODIFIER | c.411+75A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/7 | chr11 | 90035697 | |||||||
| chr11:90035699 | G | A | 8 | a0001c0001t0001g0027 a0002c0002t0002g0004 a0002c0002t0002g0009 others(5): Show |
12 | HG00408.hp1 HG00639.hp2 HG01099.hp2 others(9): Show |
intron_variant | MODIFIER | c.411+77G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 3/7 | chr11 | 90035699 | |||||||
| chr11:90036014 | G | C | 1 | a0001c0001t0001g0010 | 2 | HG02135.hp1 NA18981.hp2 |
intron_variant | MODIFIER | c.507+31G>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036014 | |||||||
| chr11:90036114 | T | C | 8 | a0001c0001t0001g0027 a0002c0002t0002g0004 a0002c0002t0002g0009 others(5): Show |
12 | HG00408.hp1 HG00639.hp2 HG01099.hp2 others(9): Show |
intron_variant | MODIFIER | c.507+131T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036114 | |||||||
| chr11:90036141 | C | T | 8 | a0001c0001t0001g0027 a0002c0002t0002g0004 a0002c0002t0002g0009 others(5): Show |
12 | HG00408.hp1 HG00639.hp2 HG01099.hp2 others(9): Show |
intron_variant | MODIFIER | c.507+158C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036141 | |||||||
| chr11:90036400 | C | T | 2 | a0001c0001t0001g0012 a0001c0001t0001g0035 |
3 | NA18939.hp1 NA18961.hp1 NA19070.hp2 |
intron_variant | MODIFIER | c.507+417C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036400 | |||||||
| chr11:90036633 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.507+650T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036633 | |||||||
| chr11:90036798 | G | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.507+815G>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036798 | |||||||
| chr11:90036846 | G | A | 1 | a0001c0001t0001g0035 | 1 | NA18939.hp1 | intron_variant | MODIFIER | c.507+863G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036846 | |||||||
| chr11:90036982 | C | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.508-767C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90036982 | |||||||
| chr11:90037071 | ATATGTAT others(1): Show |
A | 39 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(36): Show |
116 | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(113): Show |
intron_variant | MODIFIER | c.508-656_508-649del others(8): Show |
TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr11 | 90037071 | ||||||
| chr11:90037145 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.508-604T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90037145 | |||||||
| chr11:90037163 | T | C | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.508-586T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90037163 | |||||||
| chr11:90037190 | G | A | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.508-559G>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90037190 | |||||||
| chr11:90037276 | A | C | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.508-473A>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90037276 | |||||||
| chr11:90037380 | T | G | 2 | a0001c0003t0001g0021 a0004c0006t0003g0013 |
2 | HG00639.hp2 HG03490.hp2 |
intron_variant | MODIFIER | c.508-369T>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 4/7 | chr11 | 90037380 | |||||||
| chr11:90038135 | C | G | 1 | a0001c0001t0001g0024 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.738+156C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | chr11 | 90038135 | |||||||
| chr11:90038155 | G | C | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.738+176G>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | chr11 | 90038155 | |||||||
| chr11:90038222 | A | G | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.738+243A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | chr11 | 90038222 | |||||||
| chr11:90038545 | A | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.739-148A>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | chr11 | 90038545 | |||||||
| chr11:90038558 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.739-135T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | chr11 | 90038558 | |||||||
| chr11:90038658 | A | C | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.739-35A>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | chr11 | 90038658 | |||||||
| chr11:90038676 | CT | C | 7 | a0001c0001t0001g0033 a0002c0002t0002g0004 a0002c0002t0002g0009 others(4): Show |
11 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(8): Show |
splice_region_variant&intron_variant | LOW | c.739-4delT | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr11 | 90038676 | ||||||
| chr11:90038923 | G | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.761+208G>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90038923 | |||||||
| chr11:90038944 | C | G | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.761+229C>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90038944 | |||||||
| chr11:90038998 | C | A | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.761+283C>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90038998 | |||||||
| chr11:90039210 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.761+495T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039210 | |||||||
| chr11:90039263 | AAG | A | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.761+551_761+552del others(2): Show |
TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr11 | 90039263 | ||||||
| chr11:90039272 | G | T | 7 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(4): Show |
11 | HG00639.hp2 HG01099.hp2 HG01192.hp2 others(8): Show |
intron_variant | MODIFIER | c.761+557G>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039272 | |||||||
| chr11:90039337 | C | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.762-528C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039337 | |||||||
| chr11:90039434 | A | G | 9 | a0001c0001t0001g0005 a0002c0002t0002g0004 a0002c0002t0002g0009 others(6): Show |
15 | HG00639.hp2 HG01099.hp2 HG01123.hp1 others(12): Show |
intron_variant | MODIFIER | c.762-431A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039434 | |||||||
| chr11:90039528 | A | G | 2 | a0001c0001t0001g0034 a0004c0006t0003g0013 |
2 | HG00639.hp2 HG04199.hp2 |
intron_variant | MODIFIER | c.762-337A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039528 | |||||||
| chr11:90039534 | C | T | 1 | a0001c0001t0001g0006 | 3 | HG00280.hp1 HG03490.hp1 HG03492.hp2 |
intron_variant | MODIFIER | c.762-331C>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039534 | |||||||
| chr11:90039643 | C | CA | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.762-212dupA | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr11 | 90039643 | ||||||
| chr11:90039741 | T | A | 6 | a0002c0002t0002g0004 a0002c0002t0002g0009 a0002c0002t0002g0014 others(3): Show |
10 | HG01099.hp2 HG01192.hp2 HG02056.hp2 others(7): Show |
intron_variant | MODIFIER | c.762-124T>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039741 | |||||||
| chr11:90039783 | A | T | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.762-82A>T | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 6/7 | chr11 | 90039783 | |||||||
| chr11:90040065 | A | G | 1 | a0002c0002t0002g0015 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.859+103A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 7/7 | chr11 | 90040065 | |||||||
| chr11:90040444 | A | G | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.859+482A>G | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 7/7 | chr11 | 90040444 | |||||||
| chr11:90040639 | T | C | 1 | a0004c0006t0003g0013 | 1 | HG00639.hp2 | intron_variant | MODIFIER | c.860-412T>C | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 7/7 | chr11 | 90040639 | |||||||
| chr11:90040943 | T | A | 3 | a0001c0001t0001g0011 a0001c0001t0001g0025 a0005c0005t0001g0022 |
4 | HG00738.hp2 HG02132.hp2 NA18947.hp2 others(1): Show |
intron_variant | MODIFIER | c.860-108T>A | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 7/7 | chr11 | 90040943 | |||||||
| chr11:90041029 | CT | C | 24 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(21): Show |
85 | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(82): Show |
splice_region_variant&intron_variant | LOW | c.860-5delT | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr11 | 90041029 | ||||||
| chr11:90041029 | CTT | C | 7 | a0002c0002t0002g0004 a0002c0002t0002g0014 a0002c0002t0002g0015 others(4): Show |
10 | HG00639.hp2 HG00738.hp2 HG01099.hp2 others(7): Show |
splice_region_variant&intron_variant | LOW | c.860-6_860-5delTT | TRIM49C | ENSG00000204449.3 | transcript | ENST00000448984.1 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr11 | 90041029 |