Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	10099
ensemblid	ENSG00000140391.15
hgncid	17752
symbol	TSPAN3
name	tetraspanin 3
refseq_nuc	NM_005724.6
refseq_prot	NP_005715.1
ensembl_nuc	ENST00000267970.9
ensembl_prot	ENSP00000267970.4
mane_status	MANE Select
chr	chr15
start	77041404
end	77071109
strand	-
ver	v1.2
region	chr15:77041404-77071109
region5000	chr15:77036404-77076109
regionname0	TSPAN3_chr15_77041404_77071109
regionname5000	TSPAN3_chr15_77036404_77076109

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/0	253	3	0	0	2	0	0	2	TSPAN3_chr15_77036404_77076109	TSPAN3	MGQCG others(248): Show MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYT LIPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVV VVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGI HNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGCEAL VVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGG TYA	chr15	77036404	77076109

achapid	grch38/ chm13v2	alen	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aseq	cseq	chr	start	end
a0001c0001	1/0		759	2	0	0	1	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3		ATGGG others(754): Show ATGGGCCAGTGCGGCATCACCTCCTCCAAGACCGTGCTGGTCTTTCTCAA CCTCATCTTCTGGGGGGCAGCTGGCATTTTATGCTATGTGGGAGCCTATG TCTTCATCACTTATGATGACTATGACCACTTCTTTGAAGATGTGTACACG CTCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCAT TGGGCTAATTGGCTGCTGTGCCACAATCCGGGAAAGTCGCTGTGGACTTG CCACGTTTGTCATCATCCTGCTCTTGGTTTTTGTCACAGAAGTTGTTGTA GTGGTTTTGGGATATGTTTACAGAGCAAAGGTGGAAAATGAGGTTGATCG CAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAACCCTGATGCTG CTAGCCGGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTGGAATT CACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAAGAAACCAAAAA CCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTGTAATG GCAGCCTGGCCCACCCTTCCGACCTCTATGCTGAGGGGTGTGAGGCTCTA GTAGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCCGCACT GGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCTTGCATCGTGT TGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTGGCGGA ACCTATGCA	chr15	77036404	77076109
a0001c0002	0/0		759	1	0	0	1	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3		ATGGG others(754): Show ATGGGCCAGTGCGGCATCACCTCCTCCAAGACCGTGCTGGTCTTTCTCAA CCTCATCTTCTGGGGGGCAGCTGGCATTTTATGCTATGTGGGAGCCTATG TCTTCATCACTTATGATGACTATGACCACTTCTTTGAAGATGTGTACACG CTCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCAT TGGGCTAATTGGCTGCTGTGCCACAATCCGGGAAAGTCGCTGTGGACTTG CCACGTTTGTCATCATCCTGCTCTTGGTTTTTGTCACAGAAGTTGTTGTA GTGGTTTTGGGATATGTTTACAGAGCAAAGGTGGAAAATGAGGTTGATCG CAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAACCCTGATGCTG CTAGCCGGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTGGAATT CACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAAGAAACCAAAAA CCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTGTAATG GCAGCCTGGCCCACCCTTCCGACCTCTATGCTGAGGGGTGTGAGGCTCTA GTTGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCCGCACT GGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCTTGCATCGTGT TGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTGGCGGA ACCTATGCA	chr15	77036404	77076109

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	6348	2	0	0	1	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3	ACTTG others(6343): Show ACTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCTGCGGGGAGCGCC GCGCAGGCCGTGCAGTTCCTAGCGAGGAGGCGCCGCCGCCATTGCCGCTC TCTCGGTGAGCGCAGCCCCGCTCTCCGGGCCGGGCCTTCGCGGGCCACCG GCGCCATGGGCCAGTGCGGCATCACCTCCTCCAAGACCGTGCTGGTCTTT CTCAACCTCATCTTCTGGGGGGCAGCTGGCATTTTATGCTATGTGGGAGC CTATGTCTTCATCACTTATGATGACTATGACCACTTCTTTGAAGATGTGT ACACGCTCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTC ATCATTGGGCTAATTGGCTGCTGTGCCACAATCCGGGAAAGTCGCTGTGG ACTTGCCACGTTTGTCATCATCCTGCTCTTGGTTTTTGTCACAGAAGTTG TTGTAGTGGTTTTGGGATATGTTTACAGAGCAAAGGTGGAAAATGAGGTT GATCGCAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAACCCTGA TGCTGCTAGCCGGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTG GAATTCACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAAGAAACC AAAAACCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTG TAATGGCAGCCTGGCCCACCCTTCCGACCTCTATGCTGAGGGGTGTGAGG CTCTAGTAGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCC GCACTGGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCTTGCAT CGTGTTGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTG GCGGAACCTATGCATAGTTGACAACTCAAGCCTGAGCTTTTTGGTCTTGT TCTGATTTGGAAGGTGAATTGAGCAGGTCTGCTGCTGTTGGCCTCTGGAG TTCATTTAGTTAAAGCACATGTACACTGGTGTTGGACAGAGCAGCTTGGC TTTTCATGTGCCCACCTACTTACCTACTACCTGCGACTTTCTTTTTCCTT GTTCTAGCTGACTCTTCATGCCCCTAAGATTTTAAGTACGATGGTGAACG TTCTAATTTCAGAACCAATTGCGAGTCATGTAGTGTGGTAGAATTAAAGG AGGACACGAGCCTGCTTCTGTTACCTCCAAGTGGTAACAGGACTGATGCC GAAATGTCACCAGGTCCTTTCAGTCTTCACAGTGGAGAACTCTTGGCCAA AGGTTTTTGCGGGGAGGAGGAGGAAACCAGCTTTCTGGTTAAGGTTAACA CCAGATGGTGCCCCTCATTGGTGTCCTTTTAAAAAATATTTACTGTAGTC CAATAAGATAGCAGCTGTACAAAATGACTAAAATAGATTGTAGGATCATA TGGCGTATATCTTGGTTCATCTTCAAAATCAGAGACTGAGCTTTGAAACT AGTGGTTTTTAATCAAAGTTGGCTTTATAGGAGGAGTATAATGTATGCAC TACTGTTTTAAAAGAATTAGTGTGAGTGTGTTTTTGTATGAATGAGCCCA TTCATGGTAAGTCTTAAGCTTGTTGGAAATAATGTACCCATGTAGACTAG CAAAATAGTATGTAGATGTGATCTCAGTTGTAAATAGAAAAATCTAATTC AATAAACTCTGTATCAGCCCCCAACATATTATTTTTCATTATTTGGGGGA TATTTCAGTTCCAGAGCAGCAGTATCATGTTTTCTTTGTTGGTGCTGTCT ATAGTTCATCATGGTTTACGTGTGTTTTCGTTATAGCTGTTGCCAGATTC TAAAGGGCTTGATATTCAAAAAACCACAGATGCTTTCAGTCCAGTATATC CTAGAAATATAGAGCTCTACTTTGTGCAATGCACTGGGGATACAGTGGCG ATACTGTCCTTGTCTTCAAGGAGTTCGGAGTCCTAGTATAGGAGACATAC ATAGGAGAAGATAATTTTCACACTGCAGTGGTTGTAGTAATAGAATGGGA GTCCAAAGGGGAGTTCCGGAGAGGTCAGGGGTGACTTCCTGGAGGAGATG CCCAAGCTTGGAGGCTGGATAGGCTTTGTTGAAAGATGGTACACAAGAGT GTGAAACAAAATTGTGTGTGCAGGGAGCTTAAAATACAAGGCTGGGGAAA GAAGTTGGAGAAGCAGGAAAGCCCAGGCCCTCTAGTGTCTTACGGAACAT CCTGTGGAGGTGAGAGCTGACTTGTAGGTGGAAGCAGCTCTTTGGAGGTT TGATTTGGAAGGTGAACTGAGAAGAAGGTGGTGATGCAAGCCGGCCGTGC TGAAGCCAGGATGAATTGGTGTGACTGGGCTTCAGTTAGGCTGGCATAGC AGTTGAGAGAGCTTAGCAGTGGGCAGCAGGGCACTGTTGGGGGCGGTGGT GAGCGGTGGATTCTGGCTGTTTGGAGGCAGGACAGTGGTGGAATTCGATC ATTGATTGGACGTGGGACAGAGAAGGGAGAAGAGAAGACTCATCTAGGAT GAGTCCCAGGTTTCTGGCTCAGTCAACTGGGGAAACAAAGTCACAGAGCT AGGGAGTAGTTAGAGAACACATCTGGGGGTGTGACTCATGGTCAGTTTTG GGCTCGTCAGTTTTGAGATGCCCAAATATCATGCAGATCTGTCCCACCTG AAAATGGAGAAGACACGGGAAAGGAGAGGAGTAAAAACTAACTCCTTTTC ACAAAGTGGAAGTTACCAGAATGTGATTTCAGAGGCCCCGGGGGATTTAT CATGTGACTACTGACCCATCCCACCTCTTGCCCCTGCCTGTTGCACAGTG GGCAAGAATGTTTGTGACCTTTCACTACCACCACCTCCCCCGAGCATGGT CCCCCCAGTTTTCAATATGAACCATCCTGTGGGTACCCTGTCACAGGCTG GCCCTGAGGTGAGCAATATTTGGACTGTGATGTTGGTTGTTCTCCACTCT TTCTACAGGACAGAACAGGGCCTCTAGAGTGGGAAATGGCTTTGGGAAAT ATGCCAAGCAGTAGCCTTGTTCTTCAACTTGCCCAAGAGGATAATTCTCC ACACCCTTCCTGTACTCAGTCCTCAGTTTGCCTGGTGAGAGAGCAGCCTC CTCCCGTGTGCTCTGCCAGCTGGACCCAGACTGGCCATATTACCAGTGAG ACCAAAAAGATGGAGGTGGGGAGGTAGCTCTGAGGTCTGGGAAACCATTC CAGCTCCTGCCAGTTTTAACTTGTGTTTAATTCCTGGCACAGTTGTCCTG GAAATGCCTTTTTCTCTTGCCTGGGAACCACTAGAAGGGGATGTTGTCTG TGTTGGCCAGGGCCATGCAAATTCAACATCTTGTTTCTGCCCTTCCCCCG TGTAGCTGAGGCTAGGTGTTGGCATTACCCAGTGCTTGTTCTTCAGAGAG CAAAAGCACTGCTCGTCATGTCTGAAATTTAGTGAGTGAGCTCACCCACT AGGCTGGTGTTTCCTGCCCGTGGCTGCACATTGGAAGCACCGGGGCACTT TGAGAACTACAGATGCCTGGGTCCCAGAGCATCTAAGGTGCTCTAGGGTG TGTCCAGGACACAGCCCTGGTTGAGGACCACTGCTATATTGTATGGCCTC TTTTAAAAAAGTTAATTTTACTTGGAAATGATTTCAAAGCTACAGAAAAG TTGCAAGAATAAAAACTGTACAAATGAGGCTCAAATATCCTTTGCCCAGA TACACCTATTAACATTTCGTCCCATTCTATCTGTCATGTGTGTTCTCAAA TGTGTGTGCGTTCTCTCTCCCTTGCGCCAACCCCCTGTCTCTCCCTCTCC CTCCCTCCTGCTGCCTCCACACCTGTCATGGCCTTTTACCCCTAATACCT CAGTGGGTACTTACCAAGAAGAAGATACTCTCTGACGACTGCAGTACAGT TGTCAAATTCCGTCCATCTAACACTGATAGAATACCTCACCACTCATATT CCCATTGGCCGCATCGTGTCCTCTATAGCACCTTTCCCTCTGCGGTGCTG GATCTGGTCTGGATCAGGTAATCAGTTGAGTTGTCATGTCTCCTTGGTCT TCTTTAATCTGGATCATTTCCATAGCTTTGTCTGTGATGATAGGAACAGT TTGTAAGGATACAGTTCGTTTTAGGTGGTGCTGCTTATCTGTGTTTGTCT GCGATTTCCTCGTGATTAGATTTGGTTTTGCATTCCAGGTGGCTGAACCA CTACCTGCGTCACGCGGCCTCTCAGGGCATCGCATCTCGAGGCACACAAT GCCCATCTGCCCCACAGTGGGGATGTTCGTTTTGATCATCTAGTCCAAGG AGGAGGAAATGTGAACAGGAAGGTTTTAATATAAGTAATTGTTAACTGTG TAGAAGGTAGTTAACTACTAAAAGGGATAAAAAAGAGCTCTAAAGCAGCT TAGCAGAGAACAGCCATCACCCCTAGGGCTAAGGGAAGAGAAAACAGAGA AGGAACGTGGAAACTCAGAGGAGGTTCCCCAAGGTGGAGAGACCTCCGAG GGGTGGCTGTGGTTGCCTGGGATATGCTGCCTGTCCCATGCTGGAGAATC AACTTACTGGAGGTGCCCCCCCGCCAAGCCACAGGAGCAGAGAGCTGTCA CGGTGGGGAATGCTGCTGGGACCCGTGCAGGACGAAAGGAGACAGAAGAA AAAGGCCATCTTCCTCCTCTAGCCTTGTTAGCCCCTTCAGAGCCCACTGT GGGTCAGGCTGGCAAAGGGTAAAGGAGTTTTCAGAGCCCCCTCTTCAGTG TGACAAGGAAGGGCAAGGTCAGGGAAATTTGGAGTTAAGAGGCAATAAAT GAGTACCTGGCACACCTAGTCGAGGTGTGTCCACTTTCTCCATAGCATGG TTACTGTTTTTTTCTTTTCAACTAATAAGAAATCTCTGGAGACACACTGT CTCCATGTACATACCCTGTTCCTCATGAGACTCTTCCCCATTCCCCGACC AGGTTCAGCAAATGTTGCTGATTCTGGCCTGATTCAATCTTTATGATGAC TGCCAAGCGACGTTTCTGCAGCCCAGCACTCCTTCCTCATTTGCCAGTCA TCCCTCCCTTCTCCTTCATTTATTTTCATATATCCACTATGGATTCCCAT TTTTTCAAAAGTCGACTTCATCATTGACCTTTGGGGATGGGGGAAGAGTT CCTCAGATAGTTCCCGACTTGGCCAGCGAGAGCCCCTTCGAGTGCCTCCT ATATCCCAGCATTTTTGGAAGCACTCCCCTAATTTCTGATCTAACAAGAT GTTCCAGGCCCCTGGGCACCAGCCATGGATCAGTGTTTGTCCCAGGAGCC CTGGTCCCTGGCACTAGGTGTGCTTATTGCAGCTGGGGTGTCTTTGCTTC TTGTCCTATAGATGATTGACAGAGCTTGTCTTACTGCCTTTTTTAAGTGT ATTTTTTTAAACAAAAGTAATTGGTGCTTTAAAAAATGTGAACAATACAG ACATCTGTAAAGAAGTACCCACAGGGAAGCAAGTTCAGCAGTTCAGCAAT GGCATGTGTCTTTGCAGACTACATACACAGAAACAGACTTGGTATTGGGT TTTGGTTTTTGCTTTTTGCTAATAGGAATTTTATCCTACAAGATCCTCTT TCTGTCTTCACAACATAGTCTGATGCTCCTTCCATGTCTAACTGTAGGAT TTGTCATTCCATTGTGTTAGCTGTGTGGGTACATTAGTACCATGATTAAC CAAGGTGTATAAAGGGCAGGCCTGCAGGCTGCCTCCAGTGCCTCCACTAC TCGCCACAGTGATCATCTCTATACACACACTGCAGTCATTTACAATTTTT AAAATGAAAACAATTTTTATTGAGATGCAATTCACATGGCATAAAATTAA CGATTTTAAAGTAAAGAAGTTGCCTTGAGTACATTCACCATGCTATAGAA CCACTGCCTGTATCTAGTTTCAAAGCACTTTCATCACCCTGTGTCATGTA TTTTTACATGAACTCCAAGGGTGGATTCTTGTTAGTTGGATTTACTCTGG ATGGAAAAGTCATGTTTGGCTGGGTGCAGTGGCTCATGCCTGTAATCATA GCACTTTGGGAGGTCGAGACAGGTGGGTCACTTGAGATCAGGAGTTCAAA ACCAGCCTGGCCAACATGGTGAAACCCATCTCTATTAAAAATACAAAAAA TTAGCAGGGCCTGGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGCT GAGGCAGGAGAATCGCTTGAACCGGGAGGCAGAGGTTGCAGTGAGCCGAG ATTATGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTC	chr15	77036404	77076109
a0001c0002t0002	0/0	6348	1	0	0	1	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3	GCTTG others(6343): Show GCTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCTGCGGGGAGCGCC GCGCAGGCCGTGCAGTTCCTAGCGAGGAGGCGCCGCCGCCATTGCCGCTC TCTCGGTGAGCGCAGCCCCGCTCTCCGGGCCGGGCCTTCGCGGGCCACCG GCGCCATGGGCCAGTGCGGCATCACCTCCTCCAAGACCGTGCTGGTCTTT CTCAACCTCATCTTCTGGGGGGCAGCTGGCATTTTATGCTATGTGGGAGC CTATGTCTTCATCACTTATGATGACTATGACCACTTCTTTGAAGATGTGT ACACGCTCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTC ATCATTGGGCTAATTGGCTGCTGTGCCACAATCCGGGAAAGTCGCTGTGG ACTTGCCACGTTTGTCATCATCCTGCTCTTGGTTTTTGTCACAGAAGTTG TTGTAGTGGTTTTGGGATATGTTTACAGAGCAAAGGTGGAAAATGAGGTT GATCGCAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAACCCTGA TGCTGCTAGCCGGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTG GAATTCACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAAGAAACC AAAAACCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTG TAATGGCAGCCTGGCCCACCCTTCCGACCTCTATGCTGAGGGGTGTGAGG CTCTAGTTGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCC GCACTGGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCTTGCAT CGTGTTGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTG GCGGAACCTATGCATAGTTGACAACTCAAGCCTGAGCTTTTTGGTCTTGT TCTGATTTGGAAGGTGAATTGAGCAGGTCTGCTGCTGTTGGCCTCTGGAG TTCATTTAGTTAAAGCACATGTACACTGGTGTTGGACAGAGCAGCTTGGC TTTTCATGTGCCCACCTACTTACCTACTACCTGCGACTTTCTTTTTCCTT GTTCTAGCTGACTCTTCATGCCCCTAAGATTTTAAGTACGATGGTGAACG TTCTAATTTCAGAACCAATTGCGAGTCATGTAGTGTGGTAGAATTAAAGG AGGACACGAGCCTGCTTCTGTTACCTCCAAGTGGTAACAGGACTGATGCC GAAATGTCACCAGGTCCTTTCAGTCTTCACAGTGGAGAACTCTTGGCCAA AGGTTTTTGGGGGGAGGAGGAGGAAACCAGCTTTCTGGTTAAGGTTAACA CCAGATGGTGCCCCTCATTGGTGTCCTTTTAAAAAATATTTACTGTAGTC CAATAAGATAGCAGCTGTACAAAATGACTAAAATAGATTGTAGGATCATA TGGCGTATATCTTGGTTCATCTTCAAAATCAGAGACTGAGCTTTGAAACT AGTGGTTTTTAATCAAAGTTGGCTTTATAGGAGGAGTATAATGTATGCAC TACTGTTTTAAAAGAATTAGTGTGAGTGTGTTTTTGTATGAATGAGCCCA TTCATGGTAAGTCTTAAGCTTGTTGGAAATAATGTACCCATGTAGACTAG CAAAATAGTATGTAGATGTGATCTCAGTTGTAAATAGAAAAATCTAATTC AATAAACTCTGTATCAGCCCCCAACATATTATTTTTCATTATTTGGGGGA TATTTCAGTTCCAGAGCAGCAGTATCATGTTTTCTTTGTTGGTGCTGTCT ATAGTTCATCATGGTTTACGTGTGTTTTCGTTATAGCTGTTGCCAGATTC TAAAGGGCTTGATATTCAAAAAACCACAGATGCTTTCAGTCCAGTATATC CTAGAAATATAGAGCTCTACTTTGTGCAAGGCACTGGGGATACAGTGGCG ATACTGTCCTTGTCTTCAAGGAGTTCGGAGTCCTAGTATAGGAGACATAC ATAGGAGAAGATAATTTTCACACTGCAGTGGTTGTAGTAATAGAATGGGA GTCCAAAGGGGAGTTCCGGAGAGGTCAGGGGTGACTTCCTGGAGGAGATG CCCAAGCTTGGAGGCTGGATAGGCTTTGTTGAAAGATGGTACACAAGAGT GTGAAACAAAATTGTGTGTGCAGGGAGCTTAAAATACAAGGCTGGGGAAA GAAGTTGGAGAAGCAGGAAAGCCCAGGCCCTCTAGTGTCTTACGGAACAT CCTGTGGAGGTGAGAGCTGACTTGTAGGTGGAAGCAGCTCTTTGGAGGTT TGATTTGGAAGGTGAACTGAGAAGAAGGTGGTGATGCAAGCCGGCCGTGC TGAAGCCAGGATGAATTGGTGTGACTGGGCTTCAGTTAGGCTGGCATAGC AGTTGAGAGAGCTTAGCAGTGGGCAGCAGGGCACTGTTGGGGGCGGTGGT GAGCGGTGGATTCTGGCTGTTTGGAGGCAGGACAGTGGTGGAATTCGATC ATTGATTGGACGTGGGACAGAGAAGGGAGAAGAGAAGACTCATCTAGGAT GAGTCCCAGGTTTCTGGCTCAGTCAACTGGGGAAACAAAGTCACAGAGCT AGGGAGTAGTTAGAGAACACATCTGGGGGTGTGACTCACGGTCAGTTTTG GGCTCGTCAGTTTTGAGATGCCCAAATATCATGCAGATCTGTCCCACCTG AAAATGGAGAAGACACGGGAAAGGAGAGGAGTAAAAACTAACTCCTTTTC ACAAAGTGGAAGTTACCAGAATGTGATTTCAGAGGCCCCGGGGGATTTAT CATGTGACTACTGACCCATCCCACCTCTTGCCCCTGCCTGTTGCACAGTG GGCAAGAATGTTTGTGACCTTTCACTACCACCACCTCCCCCGAGCATGGT CCCCCCAGTTTTCAATATGAACCATCCTGTGGGTACCCTGTCACAGGCTG GCCCTGAGGTGAGCAATATTTGGACTGTGATGTTGGTTGTTCTCCACTCT TTCTACAGGACAGAACAGGGCCTCTAGAGTGGGAAATGGCTTTGGGAAAT ATGCCAAGCAGTAGCCTTGTTCTTCAACTTGCCCAAGAGGATAATTCTCC ACACCCTTCCTGTACTCAGTCCTCAGTTTGCCTGGTGAGAGAGCAGCCTC CTCCCGTGTGCTCTGCCAGCTGGACCCAGACTGGCCATATTACCAGTGAG ACCAAAAAGATGGAGGTGGGGAGGTAGCTCTGAGGTCTGGGAAACCATTC CAGCTCCTGCCAGTTTTAACTTGTGTTTAATTCCTGGCACAGTTGTCCTG GAAATGCCTTTTTCTCTTGCCTGGGAACCACTAGAAGGGGATGTTGTCTG TGTTGGCCAGGGCCATGCAAATTCAACATCTTGTTTCTGCCCTTCCCCCG TGTAGCTGAGGCTAGGTGTTGGCATTACCCAGTGCTTGTTCTTCAGAGAG CAAAAGCACTGCTCGTCATGTCTGAAATTTAGTGAGTGAGCTCACCCACT AGGCTGGTGTTTCCTGCCCGTGGCTGCACATTGGAAGCACCGGGGCACTT TGAGAACTACAGATGCCTGGGTCCCAGAGCATCTAAGGTGCTCTAGGGTG TGTCCAGGACACAGCCCTGGTTGAGGACCACTGCTATATTGTATGGCCTC TTTTAAAAAAGTTAATTTTACTTGGAAATGATTTCAAAGCTACAGAAAAG TTGCAAGAATAAAAACTGTACAAATGAGGCTCAAATATCCTTTGCCCAGA TACACCTATTAACATTTCGTCCCATTCTATCTGTCATGTGTGTTCTCAAA TGTGTGTGCGTTCTCTCTCCCTTGCGCCAACCCCCTGTCTCTCCCTCTCC CTCCCTCCTGCTGCCTCCACACCTGTCATGGCCTTTTACCCCTAATACCT CAGTGGGTACTTACCAAGAAGAAGATACTCTCTGACGACTGCAGTACAGT TGTCAAATTCCGTCCATCTAACACTGATAGAATACCTCACCACTCATATT CCCATTGGCCGCATCGTGTCCTCTATAGCACCTTTCCCTCTGCGGTGCTG GATCTGGTCTGGATCAGGTAATCAGTTGAGTTGTCATGTCTCCTTGGTCT TCTTTAATCTGGATCATTTCCATAGCTTTGTCTGTGATGATAGGAACAGT TTGTAAGGATACAGTTCGTTTTAGGTGGTGCTGCTTATCTGCGTTTGTCT GCGATTTCCTCGTGATTAGATTTGGTTTTGCATTCCAGGTGGCTGAACCA CTACCTGCGTCACGCGGCCTCTCAGGGCATCGCATCTCGAGGCACACAAT GCCCATCTGCCCCACAGTGGGGATGTTCGTTTTGATCATCTAGTCCAAGG AGGAGGAAATGTGAACAGGAAGGTTTTAATATAAGTAATTGTTAACTGTG TAGAAGGTAGTTAACTACTAAAAGGGATAAAAAAGAGCTCTAAAGCAGCT TAGCAGAGAACAGCCATCACCCCTAGGGCTAAGGGAAGAGAAAACAGAGA AGGAACGTGGAAACTCAGAGGAGGTTCCCCAAGGTGGAGAGACCTCCGAG GGGTGGCTGTGGTTGCCTGGGATATGCTGCCTGTCCCATGCTGGAGAATC AACTTACTGGAGGTGCCCCCCCGCCAAGCCACAGGAGCAGAGAGCTGTCA CGGTGGGGAATGCTGCTGGGACCCGTGCAGGACGAAAGGAGACAGAAGAA AAAGGCCATCTTCCTCCTCTAGCCTTGTTAGCCCCTTCAGAGCCCACTGT GGGTCAGGCTGGCAAAGGGTAAAGGAGTTTTCAGAGCCCCCTCTTCAGTG TGACAAGGAAGGGCAAGGTCAGGGAAATTCGGAGTTAAGAGGCAATAAAT GAGTACCTGGCACACCTAGTCGAGGTGTGTCCACTTTCTCCATAGCATGG TTACTGTTTTTTTCTTTTCAACTAATAAGAAATCTCTGGAGACACACTGT CTCCATGTACATACCCTGTTCCTCATGAGACTCTTCCCCATTCCCCGACC AGGTTCAGCAAATGTTGCTGATTCTGGCCTGATTCAATCTTTATGATGAC TGCCAAGCGATGTTTCTGCAGCCCAGCACTCCTTCCTCATTTGCCAGTCA TCCCTCCCTTCTCCTTCATTTATTTTCATATATCCACTATGGATTCCCAT TTTTTCAAAAGTCGACTTCATCATTGACCTTTGGGGATGGGGGAAGAGTT CCTCAGATAGTTCCCGACTTGGCCAGTGAGAGCCCCTTCGAGTGCCTCCT ATATCCCAGCATTTTTGGAAGCACTCCCCTAATTTCTGATCTAACAAGAT GTTCCGGGCCCCTGGGTACCAGCCATGGATCAGTGTTTGTCCCAGGAGCC CTGGTCCCTGGCACTAGGTGTGCTTATTGCAGCTGGGGTGTCTTTGCTTC TTGTCCTATAGATGATTGACAGAGCTTGTCTTACTGCCTTTTTTAAGTGT ATTTTTTTAAACAAAAGTAATTGGTGCTTTAAAAAATGTGAACAATACAG ACATCTGTAAAGAAGTACCCACAGGGAAGCAAGTTCAGCAGTTCAGCAAT GGCATGTGTCTTTGCAGACTACATACACAGAAACAGACTTGGTATTGGGT TTTGGTTTTTGCTTTTTGCTAATAGGAATTTTATCCTACAAGATCCTCTT TCTGTCTTCACAACATAGTCTGATGCTCCTTCCATGTCTAACTGTAGGAT TTGTCATTCCATTGTGTTAGCTGTGTGGGTACATTAGTACCATGATTAAC CAAGGTGTATAAAGGGCAGGCCTGCAGGCTGCCTCCAGTGCCTCCACTAC TCGCCACAGTGATCATCTCTATACACACACTGCAGTCATTTACAATTTTT AAAATGAAAACAATTTTTATTGAGATGCAATTCACATGGCATAAAATTAA CGATTTTAAAGTAAAGAAGTTGCCTTGAGTACATTCACCATGCTATAGAA CCACTGCCTGTATCTAGTTTCAAAGCACTTTCATCACCCTGTGTCATGTA TTTTTACATGAACTCCAAGGGTGGATTCTTGTTAGTTGGATTTACTCTGG ATGGAAAAGTCATGTTTGGCTGGGTGCAGTGGCTCATGCCTGTAATCATA GCACTTTGGGAGGTCGAGACAGGTGGGTCACTTGAGATCAGGAGTTCAAA ACCAGCCTGGCCAACATGGTGAAACCCATCTCTATTAAAAATACAAAAAA TTAGCAGGGCCTGGTGGCATGCACCTGTAATCCCAGCTACTTGGGAGGCT GAGGCAGGAGAATCGCTTGAACCGGGAGGCAGAGGTTGCAGTGAGCCGAG ATTATGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTC	chr15	77036404	77076109

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	1/0	1	0	0	0	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3	chr15	77036404	77076109
a0001c0001t0001g0003	0/0	1	0	0	1	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3	chr15	77036404	77076109
a0001c0002t0002g0001	0/0	1	0	0	1	0	0	TSPAN3_chr15_77036404_77076109	TSPAN3	chr15	77036404	77076109

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
NA19067	hp1	a0001	c0002	t0002	g0001	EAS	JPT	TSPAN3_chr15_77036404_77076109	TSPAN3	chr15	77036404	77076109
NA19067	hp2	a0001	c0001	t0001	g0003	EAS	JPT	TSPAN3_chr15_77036404_77076109	TSPAN3	chr15	77036404	77076109
homoSapiens	grch38p0	a0001	c0001	t0001	g0002	REF	REF	TSPAN3_chr15_77036404_77076109	TSPAN3	chr15	77036404	77076109

view	chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

view	chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chr15:77052451	T T	A A	1	a0001c0002 a0001c0002	1	NA19067.hp1 NA19067.hp1	synonymous_variant	LOW	c.603A>T c.603A>T	p.Val201Val p.Val201Val	TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	6/7	758/6348	603/762	201/253			chr15	77052451

view	chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chr15:77042435	G G	A A	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.4400C>T c.4400C>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				4400		chr15	77042435
	chr15:77042446	T T	C C	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.4389A>G c.4389A>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				4389		chr15	77042446
	chr15:77042525	G G	A A	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.4310C>T c.4310C>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				4310		chr15	77042525
	chr15:77042691	G G	A A	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.4144C>T c.4144C>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				4144		chr15	77042691
	chr15:77042922	A A	G G	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.3913T>C c.3913T>C		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				3913		chr15	77042922
	chr15:77043560	A A	G G	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.3275T>C c.3275T>C		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				3275		chr15	77043560
	chr15:77045113	A A	G G	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.1722T>C c.1722T>C		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				1722		chr15	77045113
	chr15:77045822	A A	C C	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.1013T>G c.1013T>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				1013		chr15	77045822
	chr15:77046442	G G	C C	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.393C>G c.393C>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	7/7				393		chr15	77046442
	chr15:77071109	T T	C C	1	a0001c0002t0002 a0001c0002t0002	1	NA19067.hp1 NA19067.hp1	5_prime_UTR_variant	MODIFIER	c.-155A>G c.-155A>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/7				155		chr15	77071109

view	chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chr15:77047249	C C	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.670-322G>A c.670-322G>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	6/6						chr15	77047249
	chr15:77047343	G G	C C	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.670-416C>G c.670-416C>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	6/6						chr15	77047343
	chr15:77047986	A A	G G	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.670-1059T>C c.670-1059T>C		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	6/6						chr15	77047986
	chr15:77051075	T T	A A	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.669+1310A>T c.669+1310A>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	6/6						chr15	77051075
	chr15:77055132	A A	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.330+657T>A c.330+657T>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	3/6						chr15	77055132
	chr15:77055999	A A	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.255+65T>A c.255+65T>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	2/6						chr15	77055999
	chr15:77057960	G G	A A	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.64-1705C>T c.64-1705C>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77057960
	chr15:77058038	C C	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.64-1783G>A c.64-1783G>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77058038
	chr15:77059629	G G	C C	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.64-3374C>G c.64-3374C>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77059629
	chr15:77060177	T T	G G	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.64-3922A>C c.64-3922A>C		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77060177
	chr15:77060915	A A	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.64-4660T>A c.64-4660T>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77060915
	chr15:77061932	T T	C C	1	a0001c0001t0001g0003 a0001c0001t0001g0003	1	NA19067.hp2 NA19067.hp2	intron_variant	MODIFIER	c.64-5677A>G c.64-5677A>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77061932
	chr15:77062505	C C	A A	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.64-6250G>T c.64-6250G>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77062505
	chr15:77066309	C C	A A	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.63+4583G>T c.63+4583G>T		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77066309
	chr15:77066670	T T	C C	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.63+4222A>G c.63+4222A>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77066670
	chr15:77066981	A A	C C	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.63+3911T>G c.63+3911T>G		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77066981
	chr15:77066983	G G	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.63+3909C>A c.63+3909C>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77066983
	chr15:77067172	T T	G G	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.63+3720A>C c.63+3720A>C		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77067172
	chr15:77069749	C C	T T	1	a0001c0002t0002g0001 a0001c0002t0002g0001	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.63+1143G>A c.63+1143G>A		TSPAN3	ENSG00000140391.15	transcript	ENST00000267970.9	protein_coding	1/6						chr15	77069749