Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	100287205
ensemblid	ENSG00000227551.1
hgncid	44440
symbol	USP17L12
name	ubiquitin specific peptidase 17 like family member 12
refseq_nuc	NM_001256853.1
refseq_prot	NP_001243782.1
ensembl_nuc	ENST00000415041.1
ensembl_prot	ENSP00000389443.1
mane_status	MANE Select
chr	chr4
start	9220152
end	9221744
strand	+
ver	v1.2
region	chr4:9220152-9221744
region5000	chr4:9215152-9226744
regionname0	USP17L12_chr4_9220152_9221744
regionname5000	USP17L12_chr4_9215152_9226744

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	530	3	0	1	2	0	0	1	USP17L12_chr4_9215152_9226744	USP17L12	MEDDS others(525): Show MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVD LCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPEC LDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEF NVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESM NTGTLASLRGRARRSKGKNKHSKRALLVCQ	chr4	9215152	9226744
a0002	0/0	530	2	0	1	1	0	0	1	USP17L12_chr4_9215152_9226744	USP17L12	MEEDS others(525): Show MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVD LCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPEC LDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEF NVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESM NTGTLASLRGRARRSKGKNKHSKRALLVCQ	chr4	9215152	9226744
a0003	0/0	530	1	0	0	1	0	0	0	USP17L12_chr4_9215152_9226744	USP17L12	MEDDS others(525): Show MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVD LCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPEC LDMKLYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEF NVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESM NTGTLASLRGRARRSKGKNKHSKRALLVCQ	chr4	9215152	9226744

achapid	grch38/ chm13v2	alen	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aseq	cseq	chr	start	end
a0001c0001	0/0		1590	3	0	1	2	0	0	USP17L12_chr4_9215152_9226744	USP17L12		ATGGA others(1585): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTCACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAAAGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAAACTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9215152	9226744
a0002c0002	0/0		1590	2	0	1	1	0	0	USP17L12_chr4_9215152_9226744	USP17L12		ATGGA others(1585): Show ATGGAGGAAGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAACAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGATGTT AACTTTACTCACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTCACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCCGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGAGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAAACTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9215152	9226744
a0003c0003	0/0		1590	1	0	0	1	0	0	USP17L12_chr4_9215152_9226744	USP17L12		ATGGA others(1585): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTCACAGGCAACAAGATTGACAAGAATGTGCAATATCCTGAGTGC CTTGACATGAAGCTATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAAACTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9215152	9226744

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1593	3	0	1	2	0	0	USP17L12_chr4_9215152_9226744	USP17L12	ATGGA others(1588): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTCACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAAAGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAAACTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGA	chr4	9215152	9226744
a0002c0002t0001	0/0	1593	2	0	1	1	0	0	USP17L12_chr4_9215152_9226744	USP17L12	ATGGA others(1588): Show ATGGAGGAAGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAACAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGATGTT AACTTTACTCACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTCACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCCGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGAGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAAACTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGA	chr4	9215152	9226744
a0003c0003t0002	0/0	1593	1	0	0	1	0	0	USP17L12_chr4_9215152_9226744	USP17L12	ATGGA others(1588): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTCACAGGCAACAAGATTGACAAGAATGTGCAATATCCTGAGTGC CTTGACATGAAGCTATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAAACTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGG	chr4	9215152	9226744

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	0/0	3	0	1	2	0	0	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
a0002c0002t0001g0000	0/0	2	0	1	1	0	0	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
a0003c0003t0002g0000	0/0	1	0	0	1	0	0	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG02056	hp1	a0001	c0001	t0001	g0000	EAS	KHV	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
HG02056	hp2	a0003	c0003	t0002	g0000	EAS	KHV	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
HG02148	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
HG02148	hp2	a0002	c0002	t0001	g0000	AMR	PEL	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
NA19004	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744
NA19004	hp2	a0002	c0002	t0001	g0000	EAS	JPT	USP17L12_chr4_9215152_9226744	USP17L12	chr4	9215152	9226744

view	chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chr4:9220160	A A	C C	2	a0001 a0003 a0001 a0003	4	HG02056.hp1 HG02056.hp2 HG02148.hp1 others(1): Show HG02056.hp1 HG02056.hp2 HG02148.hp1 NA19004.hp1	missense_variant	MODERATE	c.9A>C c.9A>C	p.Glu3Asp p.Glu3Asp	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	9/1593	9/1593	3/530			chr4	9220160
	chr4:9220366	A A	G G	2	a0001 a0003 a0001 a0003	4	HG02056.hp1 HG02056.hp2 HG02148.hp1 others(1): Show HG02056.hp1 HG02056.hp2 HG02148.hp1 NA19004.hp1	missense_variant	MODERATE	c.215A>G c.215A>G	p.Asn72Ser p.Asn72Ser	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	215/1593	215/1593	72/530			chr4	9220366
	chr4:9220948	T T	C C	2	a0001 a0003 a0001 a0003	4	HG02056.hp1 HG02056.hp2 HG02148.hp1 others(1): Show HG02056.hp1 HG02056.hp2 HG02148.hp1 NA19004.hp1	missense_variant	MODERATE	c.797T>C c.797T>C	p.Met266Thr p.Met266Thr	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	797/1593	797/1593	266/530			chr4	9220948
	chr4:9220960	T T	A A	2	a0001 a0003 a0001 a0003	4	HG02056.hp1 HG02056.hp2 HG02148.hp1 others(1): Show HG02056.hp1 HG02056.hp2 HG02148.hp1 NA19004.hp1	missense_variant	MODERATE	c.809T>A c.809T>A	p.Leu270His p.Leu270His	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	809/1593	809/1593	270/530			chr4	9220960
	chr4:9221026	C C	A A	1	a0003 a0003	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.875C>A c.875C>A	p.Ala292Asp p.Ala292Asp	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	875/1593	875/1593	292/530			chr4	9221026
	chr4:9221061	C C	A A	1	a0003 a0003	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.910C>A c.910C>A	p.Gln304Lys p.Gln304Lys	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	910/1593	910/1593	304/530			chr4	9221061
	chr4:9221065	C C	T T	1	a0003 a0003	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.914C>T c.914C>T	p.Pro305Leu p.Pro305Leu	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	914/1593	914/1593	305/530			chr4	9221065
	chr4:9221079	C C	A A	2	a0001 a0003 a0001 a0003	4	HG02056.hp1 HG02056.hp2 HG02148.hp1 others(1): Show HG02056.hp1 HG02056.hp2 HG02148.hp1 NA19004.hp1	missense_variant	MODERATE	c.928C>A c.928C>A	p.Pro310Thr p.Pro310Thr	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	928/1593	928/1593	310/530			chr4	9221079
	chr4:9221362	C C	A A	1	a0001 a0001	3	HG02056.hp1 HG02148.hp1 NA19004.hp1 HG02056.hp1 HG02148.hp1 NA19004.hp1	missense_variant	MODERATE	c.1211C>A c.1211C>A	p.Thr404Lys p.Thr404Lys	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	1211/1593	1211/1593	404/530			chr4	9221362
	chr4:9221744	A A	G G	1	a0003 a0003	1	HG02056.hp2 HG02056.hp2	stop_lost&splice_region_variant	HIGH	c.1593A>G c.1593A>G	p.Ter531Trpext? p.Ter531Trpext?	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	1593/1593	1593/1593	531/530			chr4	9221744

view	chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chr4:9221318	A A	G G	2	a0001c0001 a0003c0003 a0001c0001 a0003c0003	4	HG02056.hp1 HG02056.hp2 HG02148.hp1 others(1): Show HG02056.hp1 HG02056.hp2 HG02148.hp1 NA19004.hp1	synonymous_variant	LOW	c.1167A>G c.1167A>G	p.Arg389Arg p.Arg389Arg	USP17L12	ENSG00000227551.1	transcript	ENST00000415041.1	protein_coding	1/1	1167/1593	1167/1593	389/530			chr4	9221318

view	chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

view	chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos