Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	100287238
ensemblid	ENSG00000232399.4
hgncid	44441
symbol	USP17L13
name	ubiquitin specific peptidase 17 like family member 13
refseq_nuc	NM_001256855.1
refseq_prot	NP_001243784.1
ensembl_nuc	ENST00000429667.1
ensembl_prot	ENSP00000414392.1
mane_status	MANE Select
chr	chr4
start	9224896
end	9226488
strand	+
ver	v1.2
region	chr4:9224896-9226488
region5000	chr4:9219896-9231488
regionname0	USP17L13_chr4_9224896_9226488
regionname5000	USP17L13_chr4_9219896_9231488

ahapid	grch38/ chm13v2	alen	total	AMR	EAS	regionname	genename	aa	chr	start	end
a0001	0/0	51	4	4	0	USP17L13_chr4_9219896_9231488	USP17L13	MEDDS others(46): Show MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVD L	chr4	9219896	9231488
a0002	0/0	530	2	2	0	USP17L13_chr4_9219896_9231488	USP17L13	MEDDS others(525): Show MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVD LCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPEC LDMKLYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRATQGELKRDHPCLQAPELDEHLVERATQESTLDRWKFLQEQNKTKPEF NVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTTPTHQESM NTGTLASLRGRARRSKGKNKHSKRALLVCQ	chr4	9219896	9231488
a0003	1/0	530	1	0	0	USP17L13_chr4_9219896_9231488	USP17L13	MEEDS others(525): Show MEEDSLYLGGEWQFNHFSKLTSSRLDAAFAEIQRTSLPEKSPLSCETRVD LCDDLVPEARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHPSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPEC LDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTAASITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRATQGELKRDHPCLQAPELDEHLVERATQESTLDRWKFLQEQNKTKPEF NVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESM NTGTLASLRGRARRSKGKNKHSKRALLVCQ	chr4	9219896	9231488
a0004	0/0	530	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	MEDDS others(525): Show MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVD LCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPEC LDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRATQGELKRDHPCLQAPELDEHLVERATQESTLDRWKFLQEQNKTKPEF NVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTTPTHQESM NTGTLASLRGRARRSKGKNKHSKRALLVCQ	chr4	9219896	9231488
a0005	0/0	413	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	MEEDS others(408): Show MEEDSLYLGGEWQFNHFSKLTSSRLDAAFAEIQRTSLPEKSPLSCETRVD LCDDLVPEARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTY TPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHPSKDTTLIHQIFGGY WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGEN AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPEC LDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMD DAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRVTQGELKRDHP	chr4	9219896	9231488

achapid	grch38/ chm13v2	clen	total	AMR	EAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	1590	4	4	0	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1585): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGAGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACTATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTAG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAACTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGAGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCGCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACATAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCAAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGTCGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9219896	9231488
a0002c0002	0/0	1590	2	2	0	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1585): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGACAAGAATGTGCAATATCCTGAGTGC CTTGACATGAAGCTATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9219896	9231488
a0003c0004	1/0	1590	1	0	0	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1585): Show ATGGAGGAGGACTCACTCTACTTGGGTGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCTCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGTTCCTGAGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACTATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTAG ATCATCCCTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCGCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGTCGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9219896	9231488
a0004c0003	0/0	1590	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1585): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGTATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9219896	9231488
a0005c0005	0/0	1590	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1585): Show ATGGAGGAGGACTCACTCTACTTGGGTGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCTCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGTTCCTGAGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACTATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTAG ATCATCCCTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACTTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACATCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGTAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGACTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCCGACACATCAGCAGTCCATG AACAATGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr4	9219896	9231488

acthapid	grch38 chm13v2	tlen	total	AMR	EAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1593	4	4	0	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1588): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGAGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACTATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTAG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAACTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGAGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCGCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACATAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCAAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGTCGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGA	chr4	9219896	9231488
a0002c0002t0002	0/0	1593	2	2	0	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1588): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGACAAGAATGTGCAATATCCTGAGTGC CTTGACATGAAGCTATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGG	chr4	9219896	9231488
a0003c0004t0001	1/0	1593	1	0	0	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1588): Show ATGGAGGAGGACTCACTCTACTTGGGTGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCTCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGTTCCTGAGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACTATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTAG ATCATCCCTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCGCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGTCGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGA	chr4	9219896	9231488
a0004c0003t0001	0/0	1593	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1588): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGTATGCTCTGTACGATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTGG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACCTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGACGAACACAGGACCTCTCGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACTTCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCCGACACATCAGGAGTCCATG AACACTGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGA	chr4	9219896	9231488
a0005c0005t0001	0/0	1593	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	ATGGA others(1588): Show ATGGAGGAGGACTCACTCTACTTGGGTGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCTCGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTGAGACCCGTGTCGAC CTCTGTGATGATTTGGTTCCTGAGGCAAGACAGCTTGCTCCCAGGGAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGTGAACGCTTCCTTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACGTG TCATCGTCACAAGGGCTGCATGCTCTGTACTATGCAAGCTCACATCACAC GGGCCCTCCACAATCCTGGCCACGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGGCACAAGCAGGTAG ATCATCCCTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTAC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGCATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCC AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGTGGTGTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACTTCTGCCAAGGTCCTCATCCTTGTATTGAAGAGATTCT CCGATGTGACAGGCAACAAGATTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACAACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAATGGTATAAAATGGAT GATGCCGAGGTCACCGCCTCTAGCATCACATCTGTCCTGAGTCAACAGGC CTACGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCGCAGAAGACACAGAC AGGCGAGTAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGACTCCAGGC CCCCGAGTTGGACGAGCACTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCGCTGGAAATTCCTTCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCGACGTACTTGTGATTCA TCAATCAAAATACAAGTGTGGGATGAAGAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCCGACACATCAGCAGTCCATG AACAATGGCACACTCGCTTCCCTGCGAGGGAGGGCCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGA	chr4	9219896	9231488

actghapid	grch38/ chm13v2	total	AMR	EAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	0/0	4	4	0	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
a0002c0002t0002g0000	0/0	2	2	0	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
a0003c0004t0001g0000	1/0	1	0	0	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
a0004c0003t0001g0000	0/0	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
a0005c0005t0001g0000	0/0	1	0	1	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG01928	hp1	a0002	c0002	t0002	g0000	AMR	PEL	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG01928	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG01993	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG01993	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG02056	hp1	a0004	c0003	t0001	g0000	EAS	KHV	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG02056	hp2	a0005	c0005	t0001	g0000	EAS	KHV	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG02273	hp1	a0002	c0002	t0002	g0000	AMR	PEL	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
HG02273	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488
homoSapiens	grch38p0	a0003	c0004	t0001	g0000	REF	REF	USP17L13_chr4_9219896_9231488	USP17L13	chr4	9219896	9231488

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr4:9224904	G G	C C	3	a0001 a0002 a0004 a0001 a0002 a0004	7	HG01928.hp1 HG01928.hp2 HG01993.hp1 others(4): Show HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02273.hp1 HG02273.hp2	missense_variant	MODERATE	c.9G>C c.9G>C	p.Glu3Asp p.Glu3Asp	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	9/1593	9/1593	3/530	chr4	9224904
chr4:9224969	T T	C C	3	a0001 a0002 a0004 a0001 a0002 a0004	7	HG01928.hp1 HG01928.hp2 HG01993.hp1 others(4): Show HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02273.hp1 HG02273.hp2	missense_variant	MODERATE	c.74T>C c.74T>C	p.Leu25Pro p.Leu25Pro	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	74/1593	74/1593	25/530	chr4	9224969
chr4:9225051	T T	A A	1	a0001 a0001	4	HG01928.hp2 HG01993.hp1 HG01993.hp2 others(1): Show HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02273.hp2	stop_gained	HIGH	c.156T>A c.156T>A	p.Cys52* p.Cys52*	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	156/1593	156/1593	52/530	chr4	9225051
chr4:9225062	T T	C C	3	a0001 a0002 a0004 a0001 a0002 a0004	7	HG01928.hp1 HG01928.hp2 HG01993.hp1 others(4): Show HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02273.hp1 HG02273.hp2	missense_variant	MODERATE	c.167T>C c.167T>C	p.Val56Ala p.Val56Ala	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	167/1593	167/1593	56/530	chr4	9225062
chr4:9225068	A A	T T	3	a0001 a0002 a0004 a0001 a0002 a0004	7	HG01928.hp1 HG01928.hp2 HG01993.hp1 others(4): Show HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02273.hp1 HG02273.hp2	missense_variant	MODERATE	c.173A>T c.173A>T	p.Glu58Val p.Glu58Val	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	173/1593	173/1593	58/530	chr4	9225068
chr4:9225452	C C	A A	3	a0001 a0002 a0004 a0001 a0002 a0004	7	HG01928.hp1 HG01928.hp2 HG01993.hp1 others(4): Show HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02273.hp1 HG02273.hp2	missense_variant	MODERATE	c.557C>A c.557C>A	p.Pro186His p.Pro186His	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	557/1593	557/1593	186/530	chr4	9225452
chr4:9225583	G G	A A	1	a0001 a0001	4	HG01928.hp2 HG01993.hp1 HG01993.hp2 others(1): Show HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02273.hp2	missense_variant	MODERATE	c.688G>A c.688G>A	p.Ala230Thr p.Ala230Thr	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	688/1593	688/1593	230/530	chr4	9225583
chr4:9225770	C C	A A	1	a0002 a0002	2	HG01928.hp1 HG02273.hp1 HG01928.hp1 HG02273.hp1	missense_variant	MODERATE	c.875C>A c.875C>A	p.Ala292Asp p.Ala292Asp	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	875/1593	875/1593	292/530	chr4	9225770
chr4:9225805	C C	A A	1	a0002 a0002	2	HG01928.hp1 HG02273.hp1 HG01928.hp1 HG02273.hp1	missense_variant	MODERATE	c.910C>A c.910C>A	p.Gln304Lys p.Gln304Lys	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	910/1593	910/1593	304/530	chr4	9225805
chr4:9225809	C C	T T	1	a0002 a0002	2	HG01928.hp1 HG02273.hp1 HG01928.hp1 HG02273.hp1	missense_variant	MODERATE	c.914C>T c.914C>T	p.Pro305Leu p.Pro305Leu	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	914/1593	914/1593	305/530	chr4	9225809
chr4:9225823	C C	A A	2	a0002 a0004 a0002 a0004	3	HG01928.hp1 HG02056.hp1 HG02273.hp1 HG01928.hp1 HG02056.hp1 HG02273.hp1	missense_variant	MODERATE	c.928C>A c.928C>A	p.Gln310Lys p.Gln310Lys	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	928/1593	928/1593	310/530	chr4	9225823
chr4:9225824	A A	C C	2	a0002 a0004 a0002 a0004	3	HG01928.hp1 HG02056.hp1 HG02273.hp1 HG01928.hp1 HG02056.hp1 HG02273.hp1	missense_variant	MODERATE	c.929A>C c.929A>C	p.Gln310Pro p.Gln310Pro	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	929/1593	929/1593	310/530	chr4	9225824
chr4:9225875	G G	A A	1	a0001 a0001	4	HG01928.hp2 HG01993.hp1 HG01993.hp2 others(1): Show HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02273.hp2	missense_variant	MODERATE	c.980G>A c.980G>A	p.Gly327Glu p.Gly327Glu	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	980/1593	980/1593	327/530	chr4	9225875
chr4:9225964	G G	T T	3	a0002 a0004 a0005 a0002 a0004 a0005	4	HG01928.hp1 HG02056.hp1 HG02056.hp2 others(1): Show HG01928.hp1 HG02056.hp1 HG02056.hp2 HG02273.hp1	missense_variant	MODERATE	c.1069G>T c.1069G>T	p.Ala357Ser p.Ala357Ser	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1069/1593	1069/1593	357/530	chr4	9225964
chr4:9226103	C C	T T	1	a0005 a0005	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.1208C>T c.1208C>T	p.Ala403Val p.Ala403Val	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1208/1593	1208/1593	403/530	chr4	9226103
chr4:9226137	C C	A A	1	a0005 a0005	1	HG02056.hp2 HG02056.hp2	stop_gained	HIGH	c.1242C>A c.1242C>A	p.Cys414* p.Cys414*	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1242/1593	1242/1593	414/530	chr4	9226137
chr4:9226261	G G	A A	1	a0001 a0001	4	HG01928.hp2 HG01993.hp1 HG01993.hp2 others(1): Show HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02273.hp2	missense_variant	MODERATE	c.1366G>A c.1366G>A	p.Glu456Lys p.Glu456Lys	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1366/1593	1366/1593	456/530	chr4	9226261
chr4:9226369	T T	A A	3	a0002 a0004 a0005 a0002 a0004 a0005	4	HG01928.hp1 HG02056.hp1 HG02056.hp2 others(1): Show HG01928.hp1 HG02056.hp1 HG02056.hp2 HG02273.hp1	missense_variant	MODERATE	c.1474T>A c.1474T>A	p.Ser492Thr p.Ser492Thr	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1474/1593	1474/1593	492/530	chr4	9226369
chr4:9226387	G G	C C	1	a0005 a0005	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.1492G>C c.1492G>C	p.Glu498Gln p.Glu498Gln	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1492/1593	1492/1593	498/530	chr4	9226387
chr4:9226400	C C	A A	1	a0005 a0005	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.1505C>A c.1505C>A	p.Thr502Asn p.Thr502Asn	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1505/1593	1505/1593	502/530	chr4	9226400
chr4:9226488	A A	G G	1	a0002 a0002	2	HG01928.hp1 HG02273.hp1 HG01928.hp1 HG02273.hp1	stop_lost&splice_region_variant	HIGH	c.1593A>G c.1593A>G	p.Ter531Trpext? p.Ter531Trpext?	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1593/1593	1593/1593	531/530	chr4	9226488

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr4:9224922	T T	A A	3	a0001c0001 a0002c0002 a0004c0003 a0001c0001 a0002c0002 a0004c0003	7	HG01928.hp1 HG01928.hp2 HG01993.hp1 others(4): Show HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02273.hp1 HG02273.hp2	synonymous_variant	LOW	c.27T>A c.27T>A	p.Gly9Gly p.Gly9Gly	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	27/1593	27/1593	9/530	chr4	9224922
chr4:9225264	C C	T T	1	a0004c0003 a0004c0003	1	HG02056.hp1 HG02056.hp1	synonymous_variant	LOW	c.369C>T c.369C>T	p.Cys123Cys p.Cys123Cys	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	369/1593	369/1593	123/530	chr4	9225264
chr4:9225276	T T	G G	2	a0002c0002 a0004c0003 a0002c0002 a0004c0003	3	HG01928.hp1 HG02056.hp1 HG02273.hp1 HG01928.hp1 HG02056.hp1 HG02273.hp1	synonymous_variant	LOW	c.381T>G c.381T>G	p.Thr127Thr p.Thr127Thr	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	381/1593	381/1593	127/530	chr4	9225276
chr4:9225444	A A	G G	2	a0002c0002 a0004c0003 a0002c0002 a0004c0003	3	HG01928.hp1 HG02056.hp1 HG02273.hp1 HG01928.hp1 HG02056.hp1 HG02273.hp1	synonymous_variant	LOW	c.549A>G c.549A>G	p.Val183Val p.Val183Val	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	549/1593	549/1593	183/530	chr4	9225444
chr4:9225708	C C	T T	1	a0005c0005 a0005c0005	1	HG02056.hp2 HG02056.hp2	synonymous_variant	LOW	c.813C>T c.813C>T	p.Thr271Thr p.Thr271Thr	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	813/1593	813/1593	271/530	chr4	9225708
chr4:9225840	T T	C C	2	a0002c0002 a0004c0003 a0002c0002 a0004c0003	3	HG01928.hp1 HG02056.hp1 HG02273.hp1 HG01928.hp1 HG02056.hp1 HG02273.hp1	synonymous_variant	LOW	c.945T>C c.945T>C	p.Leu315Leu p.Leu315Leu	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	945/1593	945/1593	315/530	chr4	9225840
chr4:9225975	T T	A A	1	a0005c0005 a0005c0005	1	HG02056.hp2 HG02056.hp2	synonymous_variant	LOW	c.1080T>A c.1080T>A	p.Thr360Thr p.Thr360Thr	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1080/1593	1080/1593	360/530	chr4	9225975
chr4:9226038	C C	T T	1	a0001c0001 a0001c0001	4	HG01928.hp2 HG01993.hp1 HG01993.hp2 others(1): Show HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02273.hp2	synonymous_variant	LOW	c.1143C>T c.1143C>T	p.His381His p.His381His	USP17L13	ENSG00000232399.4	transcript	ENST00000429667.1	protein_coding	1/1	1143/1593	1143/1593	381/530	chr4	9226038

view	chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

view	chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

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USP17L13_chr4_9219896_9231488 Genic Haplotype Structure on iGV

Translation Multiple Alignment View

Gene Summary (with MANE)

Amino acid(protein) Level Haplotype Info (Total: 5)

Coding Level Haplotype Info (Total: 5)

Transcript Level Haplotype Info (Total: 5)

Genebody Level Haplotype Info (Total: 5)

Haplotype Details by Sample (Haploid Level) (Total: 9)

Amino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 21)

Coding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 8)

Transcript Level Haplotype Variants (Exon) (Total: 0)

Genebody Level Haplotype Variants (Intron) (Total: 0)

Annotation (Repeats)

Annotation (SNP Array)