| geneid | 392188 |
|---|---|
| ensemblid | ENSG00000237038.5 |
| hgncid | 37181 |
| symbol | USP17L8 |
| name | ubiquitin specific peptidase 17 like family member 8 |
| refseq_nuc | NM_001256872.1 |
| refseq_prot | NP_001243801.1 |
| ensembl_nuc | ENST00000527080.1 |
| ensembl_prot | ENSP00000485306.1 |
| mane_status | MANE Select |
| chr | chr8 |
| start | 7971661 |
| end | 7973253 |
| strand | - |
| ver | v1.2 |
| region | chr8:7971661-7973253 |
| region5000 | chr8:7966661-7978253 |
| regionname0 | USP17L8_chr8_7971661_7973253 |
| regionname5000 | USP17L8_chr8_7966661_7978253 |
| ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/0 | 530 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | USP17L8_chr8_7966661_7978253 | USP17L8 | copy fasta | chr8 | 7966661 | 7978253 |
| chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 1/0 | 1593 | 3 | 2 | 0 | 0 | 0 | 0 | USP17L8_chr8_7966661_7978253 | USP17L8 | copy fasta | chr8 | 7966661 | 7978253 |
| thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|
| ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0000 | 1/0 | 3 | 2 | 0 | 0 | 0 | 0 | USP17L8_chr8_7966661_7978253 | USP17L8 | chr8 | 7966661 | 7978253 |
| achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/0 | 1593 | 3 | 2 | 0 | 0 | 0 | 0 | USP17L8_chr8_7966661_7978253 | USP17L8 | copy fasta | chr8 | 7966661 | 7978253 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0000 | 1/0 | 1593 | 3 | 2 | 0 | 0 | 0 | 0 | USP17L8_chr8_7966661_7978253 | USP17L8 | copy fasta | chr8 | 7966661 | 7978253 |
| actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0000g0000 | 1/0 | 3 | 2 | 0 | 0 | 0 | 0 | USP17L8_chr8_7966661_7978253 | USP17L8 | chr8 | 7966661 | 7978253 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG03516 | hp1 | a0001 | c0001 | t0000 | g0000 | AFR | ESN | USP17L8_chr8_7966661_7978253 | USP17L8 | chr8 | 7966661 | 7978253 |
| HG03516 | hp2 | a0001 | c0001 | t0000 | g0000 | AFR | ESN | USP17L8_chr8_7966661_7978253 | USP17L8 | chr8 | 7966661 | 7978253 |
| homoSapiens_grch38 | hp1 | a0001 | c0001 | t0000 | g0000 | REF | REF | USP17L8_chr8_7966661_7978253 | USP17L8 | chr8 | 7966661 | 7978253 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|