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geneid	10869
ensemblid	ENSG00000172046.21
hgncid	12617
symbol	USP19
name	ubiquitin specific peptidase 19
refseq_nuc	NM_001199161.2
refseq_prot	NP_001186090.1
ensembl_nuc	ENST00000417901.6
ensembl_prot	ENSP00000395260.1
mane_status	MANE Select
chr	chr3
start	49108050
end	49120823
strand	-
ver	v1.2
region	chr3:49108050-49120823
region5000	chr3:49103050-49125823
regionname0	USP19_chr3_49108050_49120823
regionname5000	USP19_chr3_49103050_49125823

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	1384	251	76	50	70	13	40	48	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002	0/0	1384	32	1	6	19	3	3	15	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0003	0/0	1384	9	0	0	9	0	0	8	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0004	0/0	1384	7	7	0	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0005	0/0	1384	1	0	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0006	0/0	1384	1	0	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0007	0/0	1384	1	1	0	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0008	0/0	1384	1	1	0	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0009	0/0	1384	1	1	0	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0010	0/0	1384	1	0	0	1	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0011	0/0	1384	1	1	0	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0012	0/0	1384	1	0	0	1	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0013	0/0	1384	1	0	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0014	0/0	1384	1	0	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0015	0/0	1384	1	0	0	1	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	4155	222	52	48	68	13	39	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0002	0/0	4155	30	1	6	17	3	3	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0003	0/0	4155	19	17	2	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0004	0/0	4155	9	0	0	9	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0005	0/0	4155	7	7	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0006	0/0	4155	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0007	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0008	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0009	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0010	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0011	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0012	0/0	4155	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0013	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0014	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0015	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0016	0/0	4155	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0017	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0018	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0019	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0020	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0021	0/0	4155	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0022	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0023	0/0	4155	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
c0024	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	567	220	45	45	83	8	38	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
t0002	1/0	567	86	39	13	19	8	6	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
t0003	0/0	567	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
t0004	0/0	567	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	115	25	24	42	3	20	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0002	0/0	23	1	6	12	2	2	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0003	1/0	21	7	5	0	5	3	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0004	0/0	13	0	0	13	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0005	0/0	10	8	2	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0006	0/0	9	0	0	9	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0007	0/0	9	0	9	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0008	0/0	7	6	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0009	0/0	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0010	0/0	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0011	0/0	4	1	0	2	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0012	0/0	4	4	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0013	0/0	3	0	0	3	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0014	0/0	3	0	3	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0015	0/0	3	3	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0016	0/0	2	0	0	1	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0017	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0018	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0019	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0020	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0021	0/0	2	0	2	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0022	0/0	2	0	0	2	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0023	0/0	2	0	0	2	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0024	0/0	2	0	0	0	0	2	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0025	0/0	2	0	2	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0026	0/0	2	0	0	0	2	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0027	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0028	0/0	2	0	0	2	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0029	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0030	0/0	2	0	0	0	0	2	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0031	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0032	0/0	1	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0033	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0034	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0035	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0036	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0037	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0038	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0039	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0040	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0041	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0042	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0043	0/0	1	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0044	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0045	0/0	1	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0046	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0047	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0048	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0049	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0050	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0051	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0052	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0053	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0054	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0055	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0056	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0057	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0058	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0059	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0060	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0061	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0062	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0063	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0064	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0065	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0066	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0067	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0068	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0069	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0070	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0071	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0072	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0073	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0074	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0075	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
g0076	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	4155	222	52	48	68	13	39	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0003	0/0	4155	19	17	2	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0006	0/0	4155	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0010	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0011	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0013	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0016	0/0	4155	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0017	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002c0002	0/0	4155	30	1	6	17	3	3	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002c0007	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002c0008	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0003c0004	0/0	4155	9	0	0	9	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0004c0005	0/0	4155	7	7	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0005c0023	0/0	4155	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0006c0012	0/0	4155	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0007c0015	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0008c0019	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0009c0018	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0010c0014	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0011c0020	0/0	4155	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0012c0009	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0013c0021	0/0	4155	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0014c0022	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0015c0024	0/0	4155	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	4721	194	38	43	68	8	36	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0001t0002	1/0	4721	26	12	5	0	5	3	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0001t0004	0/0	4721	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0003t0002	0/0	4721	17	15	2	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0003t0003	0/0	4721	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0006t0002	0/0	4721	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0010t0001	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0011t0002	0/0	4721	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0013t0002	0/0	4721	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0016t0001	0/0	4721	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0001c0017t0001	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002c0002t0002	0/0	4721	30	1	6	17	3	3	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002c0007t0002	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0002c0008t0002	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0003c0004t0001	0/0	4721	9	0	0	9	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0004c0005t0001	0/0	4721	7	7	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0005c0023t0001	0/0	4721	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0006c0012t0001	0/0	4721	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0007c0015t0002	0/0	4721	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0008c0019t0002	0/0	4721	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0009c0018t0002	0/0	4721	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0010c0014t0001	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0011c0020t0002	0/0	4721	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0012c0009t0001	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0013c0021t0001	0/0	4721	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0014c0022t0001	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823
a0015c0024t0001	0/0	4721	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	copy fasta	chr3	49103050	49125823

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	115	25	24	42	3	20	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0004	0/0	13	0	0	13	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0007	0/0	9	0	9	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0008	0/0	7	6	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0011	0/0	4	1	0	2	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0012	0/0	4	4	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0014	0/0	3	0	3	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0021	0/0	2	0	2	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0023	0/0	2	0	0	2	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0024	0/0	2	0	0	0	0	2	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0025	0/0	2	0	2	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0026	0/0	2	0	0	0	2	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0027	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0030	0/0	2	0	0	0	0	2	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0040	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0043	0/0	1	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0045	0/0	1	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0047	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0048	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0049	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0051	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0052	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0053	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0054	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0057	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0058	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0059	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0060	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0062	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0066	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0067	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0074	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0002g0003	1/0	21	7	5	0	5	3	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0002g0018	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0002g0029	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0002g0039	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0004g0069	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0001t0004g0070	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0003t0002g0005	0/0	10	8	2	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0003t0002g0009	0/0	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0003t0002g0017	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0003t0003g0019	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0006t0002g0015	0/0	3	3	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0006t0002g0072	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0006t0002g0073	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0010t0001g0041	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0011t0002g0075	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0013t0002g0071	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0016t0001g0056	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0001c0017t0001g0061	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0002t0002g0002	0/0	23	1	6	12	2	2	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0002t0002g0013	0/0	3	0	0	3	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0002t0002g0016	0/0	2	0	0	1	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0002t0002g0032	0/0	1	0	0	0	1	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0002t0002g0034	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0007t0002g0031	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0002c0008t0002g0033	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0003c0004t0001g0006	0/0	9	0	0	9	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0004c0005t0001g0010	0/0	5	5	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0004c0005t0001g0020	0/0	2	2	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0005c0023t0001g0065	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0006c0012t0001g0050	0/0	1	0	1	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0007c0015t0002g0038	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0008c0019t0002g0036	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0009c0018t0002g0035	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0010c0014t0001g0055	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0011c0020t0002g0037	0/0	1	1	0	0	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0012c0009t0001g0044	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0013c0021t0001g0063	0/0	1	0	0	0	0	1	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0014c0022t0001g0064	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
a0015c0024t0001g0042	0/0	1	0	0	1	0	0	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00140	hp1	a0001	c0001	t0002	g0003	EUR	GBR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00140	hp2	a0001	c0001	t0001	g0045	EUR	GBR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00280	hp2	a0001	c0001	t0001	g0026	EUR	FIN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00423	hp2	a0001	c0001	t0001	g0004	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00544	hp2	a0002	c0002	t0002	g0002	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00609	hp1	a0002	c0007	t0002	g0031	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00621	hp1	a0001	c0001	t0001	g0022	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00621	hp2	a0001	c0001	t0001	g0004	EAS	CHS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00639	hp1	a0002	c0002	t0002	g0002	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00639	hp2	a0001	c0001	t0001	g0007	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00733	hp1	a0001	c0001	t0002	g0003	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00733	hp2	a0002	c0002	t0002	g0002	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00735	hp2	a0002	c0002	t0002	g0002	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00741	hp1	a0001	c0001	t0001	g0007	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01069	hp2	a0001	c0001	t0001	g0021	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01070	hp1	a0002	c0002	t0002	g0002	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01070	hp2	a0001	c0001	t0001	g0014	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01071	hp1	a0002	c0002	t0002	g0002	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01074	hp2	a0001	c0003	t0002	g0005	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01081	hp1	a0001	c0001	t0001	g0066	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01099	hp1	a0002	c0002	t0002	g0002	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01099	hp2	a0001	c0001	t0001	g0007	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01175	hp1	a0001	c0001	t0001	g0014	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01192	hp2	a0001	c0001	t0001	g0014	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01243	hp1	a0001	c0003	t0002	g0005	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01255	hp2	a0001	c0001	t0002	g0003	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01256	hp2	a0001	c0001	t0001	g0007	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01257	hp1	a0001	c0001	t0001	g0007	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01258	hp1	a0001	c0001	t0001	g0007	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01261	hp1	a0001	c0001	t0001	g0021	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01261	hp2	a0001	c0001	t0002	g0003	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01346	hp1	a0001	c0001	t0001	g0007	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01346	hp2	a0005	c0023	t0001	g0065	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01433	hp1	a0001	c0001	t0001	g0007	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01433	hp2	a0001	c0001	t0002	g0003	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01496	hp1	a0001	c0001	t0001	g0007	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01496	hp2	a0001	c0001	t0001	g0025	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01515	hp1	a0001	c0001	t0001	g0043	EUR	IBS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01515	hp2	a0002	c0002	t0002	g0002	EUR	IBS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01516	hp1	a0001	c0001	t0002	g0003	EUR	IBS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01516	hp2	a0001	c0001	t0001	g0011	EUR	IBS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01517	hp1	a0001	c0001	t0002	g0003	EUR	IBS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01517	hp2	a0002	c0002	t0002	g0002	EUR	IBS	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01884	hp1	a0009	c0018	t0002	g0035	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01884	hp2	a0001	c0001	t0004	g0069	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01891	hp1	a0001	c0001	t0001	g0008	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01934	hp2	a0001	c0001	t0001	g0008	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01981	hp2	a0006	c0012	t0001	g0050	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02027	hp1	a0001	c0001	t0001	g0068	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02027	hp2	a0003	c0004	t0001	g0006	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02056	hp1	a0001	c0001	t0001	g0004	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02056	hp2	a0014	c0022	t0001	g0064	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02071	hp1	a0001	c0001	t0001	g0004	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02071	hp2	a0002	c0002	t0002	g0002	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02080	hp2	a0001	c0001	t0001	g0004	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02129	hp1	a0001	c0017	t0001	g0061	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02145	hp1	a0001	c0006	t0002	g0072	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02257	hp1	a0001	c0001	t0002	g0003	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02257	hp2	a0001	c0006	t0002	g0015	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02258	hp1	a0001	c0001	t0001	g0011	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02258	hp2	a0004	c0005	t0001	g0020	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02273	hp1	a0001	c0001	t0001	g0067	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02280	hp1	a0002	c0002	t0002	g0002	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02300	hp2	a0001	c0001	t0002	g0003	AMR	PEL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02451	hp1	a0001	c0006	t0002	g0015	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02451	hp2	a0001	c0001	t0001	g0012	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02572	hp2	a0001	c0003	t0002	g0009	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02602	hp2	a0001	c0001	t0001	g0053	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02630	hp2	a0001	c0003	t0002	g0009	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02647	hp1	a0001	c0001	t0002	g0003	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02647	hp2	a0001	c0001	t0002	g0018	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02698	hp1	a0001	c0001	t0001	g0062	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02723	hp1	a0001	c0011	t0002	g0075	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02723	hp2	a0001	c0001	t0002	g0003	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02735	hp2	a0002	c0002	t0002	g0016	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02738	hp1	a0001	c0001	t0001	g0030	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02809	hp2	a0004	c0005	t0001	g0020	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02818	hp2	a0001	c0001	t0002	g0003	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02886	hp1	a0004	c0005	t0001	g0010	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02886	hp2	a0011	c0020	t0002	g0037	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02895	hp1	a0001	c0001	t0001	g0012	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02897	hp2	a0001	c0001	t0001	g0012	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02922	hp1	a0001	c0001	t0004	g0070	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02922	hp2	a0001	c0003	t0002	g0017	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02965	hp2	a0001	c0003	t0002	g0005	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02970	hp1	a0001	c0006	t0002	g0073	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02970	hp2	a0001	c0001	t0001	g0008	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02976	hp2	a0001	c0003	t0002	g0005	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03041	hp1	a0001	c0001	t0002	g0029	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03098	hp2	a0007	c0015	t0002	g0038	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03130	hp1	a0001	c0001	t0001	g0008	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03130	hp2	a0001	c0001	t0001	g0012	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03139	hp1	a0001	c0003	t0002	g0005	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03195	hp1	a0001	c0003	t0002	g0005	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03225	hp1	a0001	c0006	t0002	g0015	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03225	hp2	a0001	c0003	t0002	g0005	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03239	hp1	a0001	c0001	t0002	g0003	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03453	hp1	a0001	c0013	t0002	g0071	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03453	hp2	a0001	c0001	t0002	g0039	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03490	hp1	a0001	c0001	t0001	g0040	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03490	hp2	a0001	c0001	t0001	g0052	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03492	hp2	a0001	c0001	t0001	g0047	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03516	hp1	a0001	c0003	t0002	g0005	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03516	hp2	a0001	c0001	t0001	g0027	AFR	ESN	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03540	hp2	a0001	c0003	t0002	g0009	AFR	GWD	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03579	hp1	a0001	c0003	t0003	g0019	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03654	hp1	a0001	c0001	t0001	g0074	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03669	hp1	a0001	c0001	t0001	g0024	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03669	hp2	a0001	c0001	t0001	g0057	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03688	hp2	a0001	c0001	t0002	g0003	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03710	hp1	a0001	c0001	t0001	g0030	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03831	hp2	a0002	c0002	t0002	g0002	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03834	hp1	a0002	c0002	t0002	g0002	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03834	hp2	a0001	c0001	t0002	g0003	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03942	hp1	a0001	c0001	t0001	g0059	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03942	hp2	a0001	c0001	t0001	g0060	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04115	hp1	a0001	c0001	t0001	g0024	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04184	hp2	a0013	c0021	t0001	g0063	SAS	BEB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04199	hp2	a0001	c0001	t0001	g0058	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04204	hp2	a0001	c0016	t0001	g0056	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG04228	hp2	a0001	c0001	t0001	g0048	SAS	STU	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18522	hp1	a0001	c0003	t0002	g0009	AFR	YRI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18522	hp2	a0001	c0001	t0001	g0008	AFR	YRI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18747	hp2	a0002	c0002	t0002	g0013	EAS	CHB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18906	hp1	a0001	c0001	t0001	g0027	AFR	YRI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18906	hp2	a0001	c0001	t0001	g0008	AFR	YRI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18940	hp1	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18940	hp2	a0001	c0001	t0001	g0011	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18942	hp1	a0001	c0001	t0001	g0011	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18942	hp2	a0001	c0001	t0001	g0054	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18945	hp1	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18947	hp1	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18948	hp2	a0001	c0001	t0001	g0046	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18951	hp1	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18951	hp2	a0001	c0001	t0001	g0023	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18954	hp1	a0001	c0001	t0001	g0076	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18954	hp2	a0002	c0002	t0002	g0013	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18961	hp1	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18963	hp1	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18964	hp2	a0001	c0001	t0001	g0022	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18969	hp2	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18971	hp2	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18973	hp1	a0002	c0008	t0002	g0033	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18979	hp1	a0001	c0001	t0001	g0028	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18979	hp2	a0002	c0002	t0002	g0034	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18984	hp1	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18984	hp2	a0001	c0001	t0001	g0051	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18992	hp1	a0001	c0010	t0001	g0041	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18992	hp2	a0010	c0014	t0001	g0055	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18998	hp1	a0015	c0024	t0001	g0042	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18999	hp1	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19000	hp1	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19002	hp1	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19005	hp1	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19005	hp2	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19012	hp1	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19030	hp1	a0001	c0001	t0002	g0003	AFR	LWK	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19030	hp2	a0008	c0019	t0002	g0036	AFR	LWK	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19043	hp1	a0001	c0001	t0002	g0018	AFR	LWK	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19043	hp2	a0004	c0005	t0001	g0010	AFR	LWK	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19058	hp1	a0012	c0009	t0001	g0044	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19058	hp2	a0001	c0001	t0001	g0023	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19065	hp1	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19065	hp2	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19066	hp1	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19070	hp2	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19076	hp2	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19079	hp1	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19079	hp2	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19080	hp2	a0002	c0002	t0002	g0013	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19084	hp1	a0001	c0001	t0001	g0004	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19088	hp1	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19088	hp2	a0001	c0001	t0001	g0028	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19089	hp2	a0002	c0002	t0002	g0016	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19090	hp2	a0002	c0002	t0002	g0002	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19091	hp2	a0003	c0004	t0001	g0006	EAS	JPT	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA19240	hp2	a0001	c0003	t0002	g0017	AFR	YRI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20129	hp1	a0001	c0003	t0002	g0005	AFR	ASW	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20752	hp1	a0002	c0002	t0002	g0032	EUR	TSI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20752	hp2	a0001	c0001	t0002	g0003	EUR	TSI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20805	hp1	a0001	c0001	t0002	g0003	EUR	TSI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20805	hp2	a0001	c0001	t0001	g0026	EUR	TSI	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20905	hp2	a0001	c0001	t0001	g0049	SAS	GIH	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01123	hp1	a0001	c0001	t0001	g0025	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02109	hp1	a0001	c0001	t0001	g0008	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02109	hp2	a0001	c0001	t0002	g0003	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02486	hp1	a0001	c0003	t0003	g0019	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02559	hp1	a0001	c0003	t0002	g0009	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03471	hp1	a0001	c0003	t0002	g0005	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG06807	hp1	a0001	c0001	t0002	g0029	AFR	USA	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
HG06807	hp2	a0004	c0005	t0001	g0010	AFR	USA	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA20300	hp2	a0004	c0005	t0001	g0010	AFR	USA	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA21309	hp1	a0001	c0001	t0002	g0003	AFR	LWK	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
NA21309	hp2	a0004	c0005	t0001	g0010	AFR	LWK	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0003	REF	REF	USP19_chr3_49103050_49125823	USP19	chr3	49103050	49125823

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:49110275	C C	G G	1	a0010 a0010	1	NA18992.hp2 NA18992.hp2	missense_variant	MODERATE	c.3947G>C c.3947G>C	p.Arg1316Pro p.Arg1316Pro	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/27	4151/4721	3947/4155	1316/1384	chr3	49110275
chr3:49110276	G G	C C	1	a0010 a0010	1	NA18992.hp2 NA18992.hp2	missense_variant	MODERATE	c.3946C>G c.3946C>G	p.Arg1316Gly p.Arg1316Gly	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/27	4150/4721	3946/4155	1316/1384	chr3	49110276
chr3:49110464	C C	A A	1	a0009 a0009	1	HG01884.hp1 HG01884.hp1	missense_variant	MODERATE	c.3839G>T c.3839G>T	p.Ser1280Ile p.Ser1280Ile	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	25/27	4043/4721	3839/4155	1280/1384	chr3	49110464
chr3:49111583	C C	T T	1	a0008 a0008	1	NA19030.hp2 NA19030.hp2	missense_variant	MODERATE	c.3134G>A c.3134G>A	p.Ser1045Asn p.Ser1045Asn	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	21/27	3338/4721	3134/4155	1045/1384	chr3	49111583
chr3:49111587	T T	C C	1	a0004 a0004	7	HG02258.hp2 HG02809.hp2 HG02886.hp1 others(4): Show HG02258.hp2 HG02809.hp2 HG02886.hp1 HG06807.hp2 NA19043.hp2 NA20300.hp2 NA21309.hp2	missense_variant	MODERATE	c.3130A>G c.3130A>G	p.Thr1044Ala p.Thr1044Ala	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	21/27	3334/4721	3130/4155	1044/1384	chr3	49111587
chr3:49111736	G G	A A	1	a0007 a0007	1	HG03098.hp2 HG03098.hp2	missense_variant	MODERATE	c.2981C>T c.2981C>T	p.Thr994Ile p.Thr994Ile	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	21/27	3185/4721	2981/4155	994/1384	chr3	49111736
chr3:49112616	C C	T T	1	a0006 a0006	1	HG01981.hp2 HG01981.hp2	missense_variant	MODERATE	c.2519G>A c.2519G>A	p.Arg840His p.Arg840His	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	18/27	2723/4721	2519/4155	840/1384	chr3	49112616
chr3:49116811	T T	C C	1	a0011 a0011	1	HG02886.hp2 HG02886.hp2	missense_variant	MODERATE	c.1042A>G c.1042A>G	p.Met348Val p.Met348Val	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	7/27	1246/4721	1042/4155	348/1384	chr3	49116811
chr3:49116909	A A	G G	1	a0012 a0012	1	NA19058.hp1 NA19058.hp1	missense_variant	MODERATE	c.944T>C c.944T>C	p.Leu315Pro p.Leu315Pro	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	7/27	1148/4721	944/4155	315/1384	chr3	49116909
chr3:49117355	G G	A A	1	a0013 a0013	1	HG04184.hp2 HG04184.hp2	missense_variant	MODERATE	c.613C>T c.613C>T	p.Pro205Ser p.Pro205Ser	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	6/27	817/4721	613/4155	205/1384	chr3	49117355
chr3:49117457	G G	C C	1	a0014 a0014	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.586C>G c.586C>G	p.Leu196Val p.Leu196Val	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	5/27	790/4721	586/4155	196/1384	chr3	49117457
chr3:49117505	G G	C C	1	a0005 a0005	1	HG01346.hp2 HG01346.hp2	missense_variant	MODERATE	c.538C>G c.538C>G	p.Arg180Gly p.Arg180Gly	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	5/27	742/4721	538/4155	180/1384	chr3	49117505
chr3:49118018	T T	G G	1	a0015 a0015	1	NA18998.hp1 NA18998.hp1	missense_variant	MODERATE	c.227A>C c.227A>C	p.His76Pro p.His76Pro	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	3/27	431/4721	227/4155	76/1384	chr3	49118018
chr3:49118069	C C	T T	1	a0003 a0003	9	HG02027.hp2 NA18961.hp1 NA18984.hp1 others(6): Show HG02027.hp2 NA18961.hp1 NA18984.hp1 NA18999.hp1 NA19005.hp2 NA19066.hp1 NA19079.hp2 NA19088.hp1 NA19091.hp2	missense_variant	MODERATE	c.176G>A c.176G>A	p.Gly59Asp p.Gly59Asp	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	3/27	380/4721	176/4155	59/1384	chr3	49118069
chr3:49119040	C C	G G	1	a0002 a0002	32	HG00544.hp2 HG00609.hp1 HG00639.hp1 others(29): Show HG00544.hp2 HG00609.hp1 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG01070.hp1 HG01071.hp1 HG01099.hp1 HG01515.hp2 HG01517.hp2 HG02071.hp2 HG02280.hp1 HG02735.hp2 HG03831.hp2 HG03834.hp1 NA18747.hp2 NA18940.hp1 NA18951.hp1 NA18954.hp2 NA18963.hp1 NA18973.hp1 NA18979.hp2 NA19000.hp1 NA19012.hp1 NA19065.hp2 NA19070.hp2 NA19076.hp2 NA19079.hp1 NA19080.hp2 NA19089.hp2 NA19090.hp2 NA20752.hp1	missense_variant	MODERATE	c.106G>C c.106G>C	p.Asp36His p.Asp36His	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/27	310/4721	106/4155	36/1384	chr3	49119040

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:49110791	G G	A A	1	a0002c0007 a0002c0007	1	HG00609.hp1 HG00609.hp1	synonymous_variant	LOW	c.3618C>T c.3618C>T	p.Leu1206Leu p.Leu1206Leu	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	24/27	3822/4721	3618/4155	1206/1384	chr3	49110791
chr3:49111991	A A	G G	1	a0001c0013 a0001c0013	1	HG03453.hp1 HG03453.hp1	synonymous_variant	LOW	c.2823T>C c.2823T>C	p.Ile941Ile p.Ile941Ile	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	20/27	3027/4721	2823/4155	941/1384	chr3	49111991
chr3:49112385	G G	A A	1	a0001c0016 a0001c0016	1	HG04204.hp2 HG04204.hp2	synonymous_variant	LOW	c.2664C>T c.2664C>T	p.Ser888Ser p.Ser888Ser	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	19/27	2868/4721	2664/4155	888/1384	chr3	49112385
chr3:49113995	C C	T T	4	a0001c0003 a0001c0011 a0009c0018 others(1): Show a0001c0003 a0001c0011 a0009c0018 a0011c0020	22	HG01074.hp2 HG01243.hp1 HG01884.hp1 others(19): Show HG01074.hp2 HG01243.hp1 HG01884.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02630.hp2 HG02723.hp1 HG02886.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp1 NA19240.hp2 NA20129.hp1	synonymous_variant	LOW	c.2502G>A c.2502G>A	p.Ala834Ala p.Ala834Ala	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/27	2706/4721	2502/4155	834/1384	chr3	49113995
chr3:49114037	G G	A A	1	a0001c0017 a0001c0017	1	HG02129.hp1 HG02129.hp1	synonymous_variant	LOW	c.2460C>T c.2460C>T	p.Leu820Leu p.Leu820Leu	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/27	2664/4721	2460/4155	820/1384	chr3	49114037
chr3:49114264	C C	T T	1	a0001c0010 a0001c0010	1	NA18992.hp1 NA18992.hp1	synonymous_variant	LOW	c.2313G>A c.2313G>A	p.Pro771Pro p.Pro771Pro	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	16/27	2517/4721	2313/4155	771/1384	chr3	49114264
chr3:49116057	C C	T T	1	a0001c0006 a0001c0006	5	HG02145.hp1 HG02257.hp2 HG02451.hp1 others(2): Show HG02145.hp1 HG02257.hp2 HG02451.hp1 HG02970.hp1 HG03225.hp1	synonymous_variant	LOW	c.1461G>A c.1461G>A	p.Pro487Pro p.Pro487Pro	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	10/27	1665/4721	1461/4155	487/1384	chr3	49116057
chr3:49116779	G G	A A	1	a0002c0008 a0002c0008	1	NA18973.hp1 NA18973.hp1	synonymous_variant	LOW	c.1074C>T c.1074C>T	p.Asp358Asp p.Asp358Asp	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	7/27	1278/4721	1074/4155	358/1384	chr3	49116779
chr3:49116893	G G	A A	4	a0001c0003 a0008c0019 a0009c0018 others(1): Show a0001c0003 a0008c0019 a0009c0018 a0011c0020	22	HG01074.hp2 HG01243.hp1 HG01884.hp1 others(19): Show HG01074.hp2 HG01243.hp1 HG01884.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02630.hp2 HG02886.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp1 NA19030.hp2 NA19240.hp2 NA20129.hp1	synonymous_variant	LOW	c.960C>T c.960C>T	p.Cys320Cys p.Cys320Cys	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	7/27	1164/4721	960/4155	320/1384	chr3	49116893

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr3:49108088	C C	T T	1	a0001c0003t0003 a0001c0003t0003	2	HG02486.hp1 HG03579.hp1 HG02486.hp1 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.324G>A c.324G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	27/27	324	chr3	49108088
chr3:49108308	T T	C C	14	a0001c0001t0001 a0001c0001t0004 a0001c0010t0001 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0010t0001 a0001c0016t0001 a0001c0017t0001 a0003c0004t0001 a0004c0005t0001 a0005c0023t0001 a0006c0012t0001 a0010c0014t0001 a0012c0009t0001 a0013c0021t0001 a0014c0022t0001 a0015c0024t0001	222	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(219): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03239.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18984.hp1 NA18984.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19076.hp1 NA19079.hp2 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.104A>G c.104A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	27/27	104	chr3	49108308
chr3:49119243	A A	G G	13	a0001c0001t0001 a0001c0010t0001 a0001c0016t0001 others(10): Show a0001c0001t0001 a0001c0010t0001 a0001c0016t0001 a0001c0017t0001 a0003c0004t0001 a0004c0005t0001 a0005c0023t0001 a0006c0012t0001 a0010c0014t0001 a0012c0009t0001 a0013c0021t0001 a0014c0022t0001 a0015c0024t0001	220	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(217): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03239.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18984.hp1 NA18984.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19076.hp1 NA19079.hp2 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-98T>C c.-98T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/27		chr3	49119243

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr3:49108573	C C	T T	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG02027.hp1 HG02027.hp1	intron_variant	MODIFIER	c.4039-45G>A c.4039-45G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49108573
chr3:49108825	C C	G G	1	a0001c0003t0002g0017 a0001c0003t0002g0017	2	HG02922.hp2 NA19240.hp2 HG02922.hp2 NA19240.hp2	intron_variant	MODIFIER	c.4039-297G>C c.4039-297G>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49108825
chr3:49109036	G G	C C	1	a0001c0013t0002g0071 a0001c0013t0002g0071	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.4039-508C>G c.4039-508C>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109036
chr3:49109223	T T	G G	2	a0001c0001t0001g0007 a0001c0001t0001g0066 a0001c0001t0001g0007 a0001c0001t0001g0066	10	HG00639.hp2 HG00741.hp1 HG01081.hp1 others(7): Show HG00639.hp2 HG00741.hp1 HG01081.hp1 HG01099.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01346.hp1 HG01433.hp1 HG01496.hp1	intron_variant	MODIFIER	c.4039-695A>C c.4039-695A>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109223
chr3:49109419	A A	C C	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	HG03490.hp2 HG03490.hp2	intron_variant	MODIFIER	c.4038+765T>G c.4038+765T>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109419
chr3:49109420	T T	C C	1	a0001c0001t0001g0030 a0001c0001t0001g0030	2	HG02738.hp1 HG03710.hp1 HG02738.hp1 HG03710.hp1	intron_variant	MODIFIER	c.4038+764A>G c.4038+764A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109420
chr3:49109556	G G	A A	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	HG02602.hp2 HG02602.hp2	intron_variant	MODIFIER	c.4038+628C>T c.4038+628C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109556
chr3:49109568	T T	G G	1	a0010c0014t0001g0055 a0010c0014t0001g0055	1	NA18992.hp2 NA18992.hp2	intron_variant	MODIFIER	c.4038+616A>C c.4038+616A>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109568
chr3:49109634	C C	T T	2	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0002g0029 a0001c0001t0002g0039	3	HG03041.hp1 HG03453.hp2 HG06807.hp1 HG03041.hp1 HG03453.hp2 HG06807.hp1	intron_variant	MODIFIER	c.4038+550G>A c.4038+550G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109634
chr3:49109673	T T	C C	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	NA18942.hp2 NA18942.hp2	intron_variant	MODIFIER	c.4038+511A>G c.4038+511A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109673
chr3:49109926	C C	T T	1	a0001c0001t0001g0023 a0001c0001t0001g0023	2	NA18951.hp2 NA19058.hp2 NA18951.hp2 NA19058.hp2	intron_variant	MODIFIER	c.4038+258G>A c.4038+258G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49109926
chr3:49110040	T T	C C	2	a0001c0001t0002g0018 a0007c0015t0002g0038 a0001c0001t0002g0018 a0007c0015t0002g0038	3	HG02647.hp2 HG03098.hp2 NA19043.hp1 HG02647.hp2 HG03098.hp2 NA19043.hp1	intron_variant	MODIFIER	c.4038+144A>G c.4038+144A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49110040
chr3:49110127	C C	T T	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	NA18984.hp2 NA18984.hp2	intron_variant	MODIFIER	c.4038+57G>A c.4038+57G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49110127
chr3:49110136	T T	C C	1	a0001c0001t0001g0022 a0001c0001t0001g0022	2	HG00621.hp1 NA18964.hp2 HG00621.hp1 NA18964.hp2	intron_variant	MODIFIER	c.4038+48A>G c.4038+48A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	26/26	chr3	49110136
chr3:49110647	G G	A A	1	a0001c0001t0001g0012 a0001c0001t0001g0012	4	HG02451.hp2 HG02895.hp1 HG02897.hp2 others(1): Show HG02451.hp2 HG02895.hp1 HG02897.hp2 HG03130.hp2	intron_variant	MODIFIER	c.3699-43C>T c.3699-43C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	24/26	chr3	49110647
chr3:49110650	G G	A A	1	a0001c0001t0004g0069 a0001c0001t0004g0069	1	HG01884.hp2 HG01884.hp2	intron_variant	MODIFIER	c.3699-46C>T c.3699-46C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	24/26	chr3	49110650
chr3:49110703	C C	A A	2	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0002g0029 a0001c0001t0002g0039	3	HG03041.hp1 HG03453.hp2 HG06807.hp1 HG03041.hp1 HG03453.hp2 HG06807.hp1	splice_region_variant&intron_variant	LOW	c.3698+8G>T c.3698+8G>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	24/26	chr3	49110703
chr3:49111457	T T	C C	66	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(63): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073 a0001c0010t0001g0041 a0001c0011t0002g0075 a0001c0013t0002g0071 a0001c0016t0001g0056 a0001c0017t0001g0061 a0002c0002t0002g0002 a0002c0002t0002g0013 a0002c0002t0002g0016 a0002c0002t0002g0032 a0002c0002t0002g0034 a0002c0007t0002g0031 a0002c0008t0002g0033 a0003c0004t0001g0006 a0004c0005t0001g0010 a0004c0005t0001g0020 a0005c0023t0001g0065 a0006c0012t0001g0050 a0010c0014t0001g0055 a0012c0009t0001g0044 a0013c0021t0001g0063 a0014c0022t0001g0064 a0015c0024t0001g0042	264	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(261): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18984.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.3217+43A>G c.3217+43A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	21/26	chr3	49111457
chr3:49111477	T T	C C	3	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0013t0002g0071 a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0013t0002g0071	4	HG03041.hp1 HG03453.hp1 HG03453.hp2 others(1): Show HG03041.hp1 HG03453.hp1 HG03453.hp2 HG06807.hp1	intron_variant	MODIFIER	c.3217+23A>G c.3217+23A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	21/26	chr3	49111477
chr3:49112180	G G	C C	2	a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0014 a0001c0001t0001g0021	5	HG01069.hp2 HG01070.hp2 HG01175.hp1 others(2): Show HG01069.hp2 HG01070.hp2 HG01175.hp1 HG01192.hp2 HG01261.hp1	intron_variant	MODIFIER	c.2765+104C>G c.2765+104C>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	19/26	chr3	49112180
chr3:49112241	G G	A A	1	a0002c0002t0002g0032 a0002c0002t0002g0032	1	NA20752.hp1 NA20752.hp1	intron_variant	MODIFIER	c.2765+43C>T c.2765+43C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	19/26	chr3	49112241
chr3:49112258	G G	C C	3	a0001c0001t0001g0004 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0004 a0001c0001t0001g0023 a0001c0001t0001g0028	17	HG00423.hp2 HG00621.hp2 HG02056.hp1 others(14): Show HG00423.hp2 HG00621.hp2 HG02056.hp1 HG02071.hp1 HG02080.hp2 NA18945.hp1 NA18947.hp1 NA18951.hp2 NA18969.hp2 NA18971.hp2 NA18979.hp1 NA19002.hp1 NA19005.hp1 NA19058.hp2 NA19065.hp1 NA19084.hp1 NA19088.hp2	intron_variant	MODIFIER	c.2765+26C>G c.2765+26C>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	19/26	chr3	49112258
chr3:49112414	C C	T T	1	a0001c0001t0001g0021 a0001c0001t0001g0021	2	HG01069.hp2 HG01261.hp1 HG01069.hp2 HG01261.hp1	intron_variant	MODIFIER	c.2647-12G>A c.2647-12G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	18/26	chr3	49112414
chr3:49112735	G G	C C	2	a0001c0001t0001g0024 a0013c0021t0001g0063 a0001c0001t0001g0024 a0013c0021t0001g0063	3	HG03669.hp1 HG04115.hp1 HG04184.hp2 HG03669.hp1 HG04115.hp1 HG04184.hp2	intron_variant	MODIFIER	c.2506-106C>G c.2506-106C>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49112735
chr3:49112750	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	7	HG01891.hp1 HG01934.hp2 HG02109.hp1 others(4): Show HG01891.hp1 HG01934.hp2 HG02109.hp1 HG02970.hp2 HG03130.hp1 NA18522.hp2 NA18906.hp2	intron_variant	MODIFIER	c.2506-121G>A c.2506-121G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49112750
chr3:49112764	T T	A A	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.2506-135A>T c.2506-135A>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49112764
chr3:49113156	G G	A A	3	a0001c0003t0002g0009 a0001c0003t0003g0019 a0011c0020t0002g0037 a0001c0003t0002g0009 a0001c0003t0003g0019 a0011c0020t0002g0037	8	HG02486.hp1 HG02559.hp1 HG02572.hp2 others(5): Show HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02630.hp2 HG02886.hp2 HG03540.hp2 HG03579.hp1 NA18522.hp1	intron_variant	MODIFIER	c.2506-527C>T c.2506-527C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113156
chr3:49113274	A A	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	NA20905.hp2 NA20905.hp2	intron_variant	MODIFIER	c.2506-645T>A c.2506-645T>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113274
chr3:49113295	G G	A A	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG04199.hp2 HG04199.hp2	intron_variant	MODIFIER	c.2506-666C>T c.2506-666C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113295
chr3:49113340	G G	A A	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG01123.hp1 HG01496.hp2 HG01123.hp1 HG01496.hp2	intron_variant	MODIFIER	c.2505+652C>T c.2505+652C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113340
chr3:49113391	C C	T T	1	a0001c0011t0002g0075 a0001c0011t0002g0075	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.2505+601G>A c.2505+601G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113391
chr3:49113516	G G	A A	2	a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0057 a0001c0001t0001g0058	2	HG03669.hp2 HG04199.hp2 HG03669.hp2 HG04199.hp2	intron_variant	MODIFIER	c.2505+476C>T c.2505+476C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113516
chr3:49113568	A A	G G	58	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(55): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073 a0001c0010t0001g0041 a0001c0013t0002g0071 a0001c0016t0001g0056 a0001c0017t0001g0061 a0003c0004t0001g0006 a0004c0005t0001g0010 a0004c0005t0001g0020 a0005c0023t0001g0065 a0006c0012t0001g0050 a0010c0014t0001g0055 a0012c0009t0001g0044 a0013c0021t0001g0063 a0014c0022t0001g0064 a0015c0024t0001g0042	231	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(228): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18984.hp1 NA18984.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19076.hp1 NA19079.hp2 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.2505+424T>C c.2505+424T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113568
chr3:49113570	G G	A A	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.2505+422C>T c.2505+422C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113570
chr3:49113775	G G	C C	2	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0002g0029 a0001c0001t0002g0039	3	HG03041.hp1 HG03453.hp2 HG06807.hp1 HG03041.hp1 HG03453.hp2 HG06807.hp1	intron_variant	MODIFIER	c.2505+217C>G c.2505+217C>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113775
chr3:49113930	C C	T T	1	a0001c0006t0002g0015 a0001c0006t0002g0015	3	HG02257.hp2 HG02451.hp1 HG03225.hp1 HG02257.hp2 HG02451.hp1 HG03225.hp1	intron_variant	MODIFIER	c.2505+62G>A c.2505+62G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113930
chr3:49113961	CAT CAT	C C	4	a0001c0001t0001g0060 a0001c0003t0002g0009 a0001c0003t0003g0019 others(1): Show a0001c0001t0001g0060 a0001c0003t0002g0009 a0001c0003t0003g0019 a0011c0020t0002g0037	9	HG02486.hp1 HG02559.hp1 HG02572.hp2 others(6): Show HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02630.hp2 HG02886.hp2 HG03540.hp2 HG03579.hp1 HG03942.hp2 NA18522.hp1	intron_variant	MODIFIER	c.2505+29_2505+30del others(2): Show c.2505+29_2505+30delAT	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	17/26	chr3	49113961
chr3:49114109	C C	T T	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG04228.hp2 HG04228.hp2	intron_variant	MODIFIER	c.2404-16G>A c.2404-16G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	16/26	chr3	49114109
chr3:49114397	A A	G G	2	a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0001g0040 a0001c0001t0001g0047	2	HG03490.hp1 HG03492.hp2 HG03490.hp1 HG03492.hp2	intron_variant	MODIFIER	c.2293-113T>C c.2293-113T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	15/26	chr3	49114397
chr3:49114418	A A	C C	2	a0002c0002t0002g0013 a0002c0002t0002g0034 a0002c0002t0002g0013 a0002c0002t0002g0034	4	NA18747.hp2 NA18954.hp2 NA18979.hp2 others(1): Show NA18747.hp2 NA18954.hp2 NA18979.hp2 NA19080.hp2	intron_variant	MODIFIER	c.2293-134T>G c.2293-134T>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	15/26	chr3	49114418
chr3:49114504	C C	T T	1	a0001c0001t0004g0070 a0001c0001t0004g0070	1	HG02922.hp1 HG02922.hp1	intron_variant	MODIFIER	c.2293-220G>A c.2293-220G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	15/26	chr3	49114504
chr3:49114558	T T	C C	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG02698.hp1 HG02698.hp1	intron_variant	MODIFIER	c.2292+205A>G c.2292+205A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	15/26	chr3	49114558
chr3:49114756	A A	G G	4	a0001c0001t0001g0066 a0001c0006t0002g0015 a0001c0006t0002g0072 others(1): Show a0001c0001t0001g0066 a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073	6	HG01081.hp1 HG02145.hp1 HG02257.hp2 others(3): Show HG01081.hp1 HG02145.hp1 HG02257.hp2 HG02451.hp1 HG02970.hp1 HG03225.hp1	splice_region_variant&intron_variant	LOW	c.2292+7T>C c.2292+7T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	15/26	chr3	49114756
chr3:49114908	A A	G G	2	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0002g0029 a0001c0001t0002g0039	3	HG03041.hp1 HG03453.hp2 HG06807.hp1 HG03041.hp1 HG03453.hp2 HG06807.hp1	intron_variant	MODIFIER	c.2182-35T>C c.2182-35T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	14/26	chr3	49114908
chr3:49115413	C C	T T	2	a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0015 a0001c0006t0002g0072	4	HG02145.hp1 HG02257.hp2 HG02451.hp1 others(1): Show HG02145.hp1 HG02257.hp2 HG02451.hp1 HG03225.hp1	intron_variant	MODIFIER	c.1888+31G>A c.1888+31G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	12/26	chr3	49115413
chr3:49116396	A A	G G	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA18948.hp2 NA18948.hp2	intron_variant	MODIFIER	c.1284-45T>C c.1284-45T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	8/26	chr3	49116396
chr3:49116416	T T	C C	1	a0009c0018t0002g0035 a0009c0018t0002g0035	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.1283+35A>G c.1283+35A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	8/26	chr3	49116416
chr3:49116635	A A	G G	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG00140.hp2 HG00140.hp2	intron_variant	MODIFIER	c.1127-28T>C c.1127-28T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	7/26	chr3	49116635
chr3:49116968	G G	C C	3	a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073 a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073	5	HG02145.hp1 HG02257.hp2 HG02451.hp1 others(2): Show HG02145.hp1 HG02257.hp2 HG02451.hp1 HG02970.hp1 HG03225.hp1	intron_variant	MODIFIER	c.910-25C>G c.910-25C>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	6/26	chr3	49116968
chr3:49117605	G G	A A	1	a0001c0011t0002g0075 a0001c0011t0002g0075	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.473-35C>T c.473-35C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	4/26	chr3	49117605
chr3:49117648	T T	C C	1	a0007c0015t0002g0038 a0007c0015t0002g0038	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.472+9A>G c.472+9A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	4/26	chr3	49117648
chr3:49118245	G G	A A	3	a0001c0001t0001g0026 a0001c0001t0001g0043 a0005c0023t0001g0065 a0001c0001t0001g0026 a0001c0001t0001g0043 a0005c0023t0001g0065	4	HG00280.hp2 HG01346.hp2 HG01515.hp1 others(1): Show HG00280.hp2 HG01346.hp2 HG01515.hp1 NA20805.hp2	intron_variant	MODIFIER	c.125-125C>T c.125-125C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118245
chr3:49118266	TA TA	T T	10	a0001c0001t0001g0011 a0001c0001t0001g0040 a0001c0001t0001g0043 others(7): Show a0001c0001t0001g0011 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0067 a0001c0001t0001g0076 a0001c0001t0004g0069 a0001c0010t0001g0041 a0002c0002t0002g0016 a0004c0005t0001g0020 a0015c0024t0001g0042	15	HG01515.hp1 HG01516.hp2 HG01884.hp2 others(12): Show HG01515.hp1 HG01516.hp2 HG01884.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02735.hp2 HG02809.hp2 HG03490.hp1 NA18940.hp2 NA18942.hp1 NA18954.hp1 NA18992.hp1 NA18998.hp1 NA19089.hp2	intron_variant	MODIFIER	c.125-147delT c.125-147delT	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118266
chr3:49118273	A A	G G	3	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0013t0002g0071 a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0013t0002g0071	4	HG03041.hp1 HG03453.hp1 HG03453.hp2 others(1): Show HG03041.hp1 HG03453.hp1 HG03453.hp2 HG06807.hp1	intron_variant	MODIFIER	c.125-153T>C c.125-153T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118273
chr3:49118396	C C	T T	3	a0001c0003t0002g0005 a0001c0003t0002g0017 a0009c0018t0002g0035 a0001c0003t0002g0005 a0001c0003t0002g0017 a0009c0018t0002g0035	13	HG01074.hp2 HG01243.hp1 HG01884.hp1 others(10): Show HG01074.hp2 HG01243.hp1 HG01884.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG03516.hp1 NA19240.hp2 NA20129.hp1	intron_variant	MODIFIER	c.125-276G>A c.125-276G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118396
chr3:49118477	T T	C C	3	a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0013t0002g0071 a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0013t0002g0071	4	HG03041.hp1 HG03453.hp1 HG03453.hp2 others(1): Show HG03041.hp1 HG03453.hp1 HG03453.hp2 HG06807.hp1	intron_variant	MODIFIER	c.125-357A>G c.125-357A>G	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118477
chr3:49118513	G G	A A	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG01081.hp1 HG01081.hp1	intron_variant	MODIFIER	c.125-393C>T c.125-393C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118513
chr3:49118524	C C	T T	1	a0001c0011t0002g0075 a0001c0011t0002g0075	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.125-404G>A c.125-404G>A	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118524
chr3:49118525	G G	A A	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	HG02273.hp1 HG02273.hp1	intron_variant	MODIFIER	c.125-405C>T c.125-405C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118525
chr3:49118582	C C	CA CA	7	a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0068 others(4): Show a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0068 a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073 a0002c0002t0002g0034	11	HG02027.hp1 HG02145.hp1 HG02257.hp2 others(8): Show HG02027.hp1 HG02145.hp1 HG02257.hp2 HG02451.hp1 HG02970.hp1 HG03225.hp1 HG03516.hp2 NA18906.hp1 NA18979.hp1 NA18979.hp2 NA19088.hp2	intron_variant	MODIFIER	c.124+439dupT c.124+439dupT	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	2/26	chr3	49118582
chr3:49119800	A A	G G	1	a0001c0001t0002g0039 a0001c0001t0002g0039	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.-136-519T>C c.-136-519T>C	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	1/26	chr3	49119800
chr3:49120042	C C	A A	1	a0001c0001t0001g0030 a0001c0001t0001g0030	2	HG02738.hp1 HG03710.hp1 HG02738.hp1 HG03710.hp1	intron_variant	MODIFIER	c.-137+714G>T c.-137+714G>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	1/26	chr3	49120042
chr3:49120255	G G	A A	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.-137+501C>T c.-137+501C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	1/26	chr3	49120255
chr3:49120338	G G	A A	58	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(55): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0002g0029 a0001c0001t0002g0039 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0006t0002g0015 a0001c0006t0002g0072 a0001c0006t0002g0073 a0001c0010t0001g0041 a0001c0013t0002g0071 a0001c0016t0001g0056 a0001c0017t0001g0061 a0003c0004t0001g0006 a0004c0005t0001g0010 a0004c0005t0001g0020 a0005c0023t0001g0065 a0006c0012t0001g0050 a0010c0014t0001g0055 a0012c0009t0001g0044 a0013c0021t0001g0063 a0014c0022t0001g0064 a0015c0024t0001g0042	231	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(228): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18984.hp1 NA18984.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19076.hp1 NA19079.hp2 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-137+418C>T c.-137+418C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	1/26	chr3	49120338
chr3:49120398	G G	A A	1	a0001c0011t0002g0075 a0001c0011t0002g0075	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.-137+358C>T c.-137+358C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	1/26	chr3	49120398
chr3:49120705	G G	A A	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA18954.hp1 NA18954.hp1	intron_variant	MODIFIER	c.-137+51C>T c.-137+51C>T	USP19	ENSG00000172046.21	transcript	ENST00000417901.6	protein_coding	1/26	chr3	49120705

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 15)

CCoding Level Haplotype Info (Total: 24)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 76)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 24)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 27)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 76)

Haplotype Details by Sample (Haploid Level) (Total: 310)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 15)

CCoding Level Variants (Synonymous Mutations) (Total: 9)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 3)

GGenebody Level Haplotype Variants (Intron) (Total: 66)

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Annotation (Repeats)

Annotation (SNP Array)