Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLCO1C1_chr12_20690332_20758386	20740783	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02572.hp2 HG01168.hp1 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0003t0004 a0001c0001t0004 a0001c0003t0004	a0001c0001t0004g0029 a0001c0003t0004g0238 a0001c0001t0004g0029 a0001c0003t0004g0238	2	296	0.0068	18	c.173 others(35): Show c.1733+418_1733+419insATATATATATATATATAT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20740787	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	296	0.0034	18	c.173 others(35): Show c.1733+433_1733+450dupATATATATATATATATAT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO2A1_chr3_133927701_134034925	133982931	A A	AGGGGGGG others(11): Show AGGGGGGGGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0107 a0001c0002t0001g0107	1	342	0.0029	18	c.97- others(33): Show c.97-3314_97-3313insCCCCCCCCCCCCCCCCCC	SLCO2A1	ENSG00000174640.15	transcript	ENST00000310926.11	protein_coding	1/13			chr3	TogoVar
SLCO3A1_chr15_91848708_92170903	91880405	C C	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02109.hp2 HG02622.hp2 others(4): Show HG01109.hp2 HG02109.hp2 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03130.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 a0001c0001t0033 a0001c0002t0001	a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0186 others(4): Show a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0186 a0001c0001t0002g0002 a0001c0001t0018g0187 a0001c0001t0033g0027 a0001c0002t0001g0188	7	190	0.0368	18	c.180 others(37): Show c.180+26318_180+26319insGTGTGTGTGTGTGTGTGT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91880407	C C	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0124 a0001c0001t0003g0124	1	190	0.0053	18	c.180 others(37): Show c.180+26320_180+26321insGTGTGTGTGTGTGTGTGT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926558	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0125 a0001c0001t0025g0125	1	190	0.0053	18	c.646 others(37): Show c.646+10122_646+10139dupTGTGTGTGTGTGTGTGTG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926596	T T	TGTGTGTG others(11): Show TGTGTGTGTGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0162 a0001c0002t0014g0162	1	190	0.0053	18	c.646 others(37): Show c.646+10139_646+10140insTGTGTGTGCGCGCGCGCG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926596	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0143 a0001c0001t0003g0143	1	190	0.0053	18	c.646 others(37): Show c.646+10139_646+10140insTGTGTGTGTGTGCGCGCG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926596	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGCGC	intron_variant intron_variant	MODIFIER	HG01517.hp1 HG02055.hp1 HG02976.hp1 HG01517.hp1 HG02055.hp1 HG02976.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0002c0003t0009 a0001c0001t0001 a0001c0001t0003 a0002c0003t0009	a0001c0001t0001g0109 a0001c0001t0003g0014 a0002c0003t0009g0155 a0001c0001t0001g0109 a0001c0001t0003g0014 a0002c0003t0009g0155	3	190	0.0158	18	c.646 others(37): Show c.646+10139_646+10140insTGTGTGTGTGTGTGCGCG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926596	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0084 a0001c0002t0002g0084	1	190	0.0053	18	c.646 others(37): Show c.646+10139_646+10140insTGTGTGTGTGTGTGTGCG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91931788	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01361.hp1 HG01952.hp2 HG01346.hp2 HG01361.hp1 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0025 a0001c0002t0001 a0001c0001t0025 a0001c0002t0001	a0001c0001t0025g0125 a0001c0002t0001g0117 a0001c0002t0001g0118 a0001c0001t0025g0125 a0001c0002t0001g0117 a0001c0002t0001g0118	3	190	0.0158	18	c.646 others(37): Show c.646+15342_646+15343insACACACACACACACACAC	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91971394	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG03491.hp1 HG00558.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0056 a0001c0001t0005g0120 a0001c0001t0003g0056 a0001c0001t0005g0120	2	190	0.0105	18	c.646 others(37): Show c.646+54952_646+54953insAAAAAAAAAAAAAAAAAA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91974265	G G	GTTATTAT others(11): Show GTTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0047 a0001c0011t0047	a0001c0011t0047g0029 a0001c0011t0047g0029	1	190	0.0053	18	c.646 others(37): Show c.646+57825_646+57842dupATTATTATTATTATTATT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91974265	G G	GTTGTTGT others(11): Show GTTGTTGTTGTTATTATTA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01081.hp1 HG01517.hp1 others(15): Show HG01074.hp2 HG01081.hp1 HG01517.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02602.hp1 HG03239.hp2 HG03516.hp2 HG03942.hp1 HG04184.hp1 HG06807.hp1 NA18939.hp1 NA18970.hp1 NA18970.hp2 NA18986.hp1 NA18991.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0016 a0001c0001t0024 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0004t0004 a0002c0003t0001	a0001c0001t0001g0023 a0001c0001t0001g0055 a0001c0001t0001g0080 others(15): Show a0001c0001t0001g0023 a0001c0001t0001g0055 a0001c0001t0001g0080 a0001c0001t0001g0109 a0001c0001t0002g0081 a0001c0001t0003g0101 a0001c0001t0003g0143 a0001c0001t0005g0060 a0001c0001t0016g0119 a0001c0001t0024g0025 a0001c0002t0001g0061 a0001c0002t0001g0091 a0001c0002t0002g0103 a0001c0002t0002g0134 a0001c0002t0002g0144 a0001c0002t0006g0160 a0001c0004t0004g0094 a0002c0003t0001g0073	18	190	0.0947	18	c.646 others(37): Show c.646+57809_646+57810insGTTGTTGTTATTATTATT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91974265	G G	GTTGTTGT others(11): Show GTTGTTGTTGTTGTTATTA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0176 a0001c0001t0060g0176	1	190	0.0053	18	c.646 others(37): Show c.646+57809_646+57810insGTTGTTGTTGTTATTATT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92028906	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0047 a0001c0011t0047	a0001c0011t0047g0029 a0001c0011t0047g0029	1	190	0.0053	18	c.647 others(37): Show c.647-65975_647-65974insGTGTGTGTGTGTGTGTGT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9			chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92028908	A A	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(34): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00621.hp2 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01257.hp1 HG01257.hp2 HG01496.hp2 HG01891.hp1 HG02300.hp2 HG02486.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp1 HG02970.hp2 HG03017.hp1 HG03139.hp2 HG03195.hp2 HG03239.hp1 HG03516.hp1 HG03704.hp2 HG04199.hp2 NA18946.hp1 NA18946.hp2 NA18965.hp2 NA18970.hp1 NA18979.hp1 NA19007.hp1 NA19030.hp2 NA19240.hp1 NA20129.hp2 NA20905.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0002c0003 a0002c0005 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0001c0001t0021 a0001c0001t0033 a0001c0001t0034 a0001c0001t0038 a0001c0001t0054 a0001c0001t0057 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0015 a0001c0002t0041 a0001c0004t0004 a0001c0006t0055 a0002c0003t0001 a0002c0003t0011 a0002c0003t0014 a0002c0003t0032 a0002c0005t0006 a0003c0008t0001	a0001c0001t0001g0115 a0001c0001t0001g0186 a0001c0001t0002g0082 others(34): Show a0001c0001t0001g0115 a0001c0001t0001g0186 a0001c0001t0002g0082 a0001c0001t0002g0113 a0001c0001t0002g0151 a0001c0001t0003g0022 a0001c0001t0003g0102 a0001c0001t0005g0133 a0001c0001t0006g0169 a0001c0001t0006g0170 a0001c0001t0007g0005 a0001c0001t0008g0016 a0001c0001t0013g0032 a0001c0001t0013g0033 a0001c0001t0021g0139 a0001c0001t0033g0027 a0001c0001t0034g0012 a0001c0001t0038g0181 a0001c0001t0054g0172 a0001c0001t0057g0179 a0001c0002t0001g0091 a0001c0002t0002g0049 a0001c0002t0002g0108 a0001c0002t0002g0134 a0001c0002t0002g0146 a0001c0002t0003g0072 a0001c0002t0015g0177 a0001c0002t0041g0003 a0001c0004t0004g0095 a0001c0006t0055g0167 a0002c0003t0001g0073 a0002c0003t0011g0017 a0002c0003t0011g0039 a0002c0003t0014g0190 a0002c0003t0032g0076 a0002c0005t0006g0173 a0003c0008t0001g0127	37	190	0.1947	18	c.647 others(37): Show c.647-65954_647-65937dupGTGTGTGTGTGTGTGTGT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO4A1_chr20_62637503_62677293	62666121	C C	CCCCCTTC others(11): Show CCCCCTTCCCCTTCCCCTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00735.hp1 HG01167.hp2 others(7): Show HG00639.hp2 HG00735.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01358.hp2 HG01891.hp2 HG03130.hp2 HG03540.hp1 NA21309.hp1	a0001 a0015 a0016 a0001 a0015 a0016	a0001c0001 a0001c0003 a0001c0006 others(2): Show a0001c0001 a0001c0003 a0001c0006 a0015c0026 a0016c0035	a0001c0001t0004 a0001c0003t0001 a0001c0003t0004 others(4): Show a0001c0001t0004 a0001c0003t0001 a0001c0003t0004 a0001c0003t0005 a0001c0006t0006 a0015c0026t0006 a0016c0035t0001	a0001c0001t0004g0285 a0001c0003t0001g0294 a0001c0003t0001g0302 others(6): Show a0001c0001t0004g0285 a0001c0003t0001g0294 a0001c0003t0001g0302 a0001c0003t0004g0036 a0001c0003t0005g0297 a0001c0003t0005g0300 a0001c0006t0006g0222 a0015c0026t0006g0221 a0016c0035t0001g0350	10	432	0.0232	18	c.127 others(35): Show c.1277-241_1277-224dupTCCCCTTCCCCTTCCCCT	SLCO4A1	ENSG00000101187.16	transcript	ENST00000217159.6	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLCO4C1_chr5_102228986_102301284	102285212	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02257.hp1 HG02280.hp2 others(5): Show HG00738.hp1 HG02257.hp1 HG02280.hp2 HG02976.hp2 HG03098.hp1 HG03195.hp2 HG03209.hp2 NA19043.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0007 a0001c0001 a0003c0007	a0001c0001t0003 a0001c0001t0005 a0003c0007t0005 others(1): Show a0001c0001t0003 a0001c0001t0005 a0003c0007t0005 a0003c0007t0016	a0001c0001t0003g0060 a0001c0001t0005g0057 a0001c0001t0005g0059 others(5): Show a0001c0001t0003g0060 a0001c0001t0005g0057 a0001c0001t0005g0059 a0001c0001t0005g0061 a0003c0007t0005g0054 a0003c0007t0005g0062 a0003c0007t0016g0055 a0003c0007t0016g0063	8	354	0.0226	18	c.619 others(35): Show c.619+6113_619+6130dupGTGTGTGTGTGTGTGTGT	SLCO4C1	ENSG00000173930.9	transcript	ENST00000310954.7	protein_coding	2/12			chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102370276	G G	GTATATAT others(11): Show GTATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0010 a0004c0005t0001g0010	1	342	0.0029	18	c.18 others(29): Show c.1862_*1863insTATATATATATATATATA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding		1497		chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102370281	T T	TATATATA others(11): Show TATATATATATATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp2 HG02809.hp1 HG02647.hp2 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0337 a0001c0001t0003g0338 a0001c0001t0003g0337 a0001c0001t0003g0338	2	342	0.0059	18	c.18 others(29): Show c.1857_*1858insGTATATATATATATATAT	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding		1492		chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102383094	G G	GTGTATAT others(11): Show GTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG01257.hp2 others(23): Show HG00408.hp1 HG00423.hp2 HG01257.hp2 HG01346.hp1 HG01516.hp2 HG01517.hp2 HG02683.hp1 HG03017.hp2 HG03834.hp2 HG04115.hp2 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18947.hp2 NA18949.hp2 NA18956.hp1 NA18966.hp2 NA18968.hp2 NA18972.hp2 NA18979.hp2 NA18980.hp1 NA19000.hp1 NA19011.hp2 NA19030.hp1 NA20752.hp1 NA20905.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0001 a0002c0003t0001g0100 a0002c0003t0001g0122 others(22): Show a0002c0003t0001g0001 a0002c0003t0001g0100 a0002c0003t0001g0122 a0002c0003t0001g0131 a0002c0003t0001g0133 a0002c0003t0001g0135 a0002c0003t0001g0137 a0002c0003t0001g0138 a0002c0003t0001g0139 a0002c0003t0001g0140 a0002c0003t0001g0141 a0002c0003t0001g0144 a0002c0003t0001g0148 a0002c0003t0001g0153 a0002c0003t0001g0154 a0002c0003t0001g0155 a0002c0003t0001g0156 a0002c0003t0001g0158 a0002c0003t0001g0159 a0002c0003t0001g0160 a0002c0003t0001g0161 a0002c0003t0001g0162 a0002c0003t0001g0163 a0002c0003t0001g0164 a0002c0003t0001g0166	26	342	0.0760	18	c.201 others(37): Show c.2017+5593_2017+5594insTATATATATATATATACA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	12/13			chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102383094	G G	GTGTGTAT others(11): Show GTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03486.hp2 HG02486.hp1 HG03486.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0023 a0002c0003t0001g0025 a0002c0003t0001g0023 a0002c0003t0001g0025	2	342	0.0059	18	c.201 others(37): Show c.2017+5593_2017+5594insTATATATATATATACACA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	12/13			chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102383094	G G	GTGTGTGT others(11): Show GTGTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0294 a0001c0002t0002g0294	1	342	0.0029	18	c.201 others(37): Show c.2017+5593_2017+5594insTATATATATACACACACA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	12/13			chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102455027	T T	TATATATA others(11): Show TATATATATATATACATAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02630.hp2 HG02896.hp1 others(1): Show HG02622.hp1 HG02630.hp2 HG02896.hp1 HG03471.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0004 a0006c0007 a0001c0001 a0003c0004 a0006c0007	a0001c0001t0001 a0003c0004t0003 a0006c0007t0001 a0001c0001t0001 a0003c0004t0003 a0006c0007t0001	a0001c0001t0001g0280 a0003c0004t0003g0317 a0003c0004t0003g0332 others(1): Show a0001c0001t0001g0280 a0003c0004t0003g0317 a0003c0004t0003g0332 a0006c0007t0001g0261	4	342	0.0117	18	c.113 others(37): Show c.1131+3354_1131+3355insTTATGTATATATATATAT	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	6/13			chr5	TogoVar
SLF1_chr5_94613669_94702621	94627585	C C	CATATATA others(11): Show CATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp1 NA18998.hp2 HG01515.hp1 HG01517.hp1 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0111 a0001c0001t0003g0117 a0001c0001t0003g0118 a0001c0001t0003g0111 a0001c0001t0003g0117 a0001c0001t0003g0118	3	364	0.0082	18	c.1-1 others(31): Show c.1-1208_1-1191dupTATATATATATATATATA	SLF1	ENSG00000133302.13	transcript	ENST00000265140.10	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLFN12L_chr17_35459254_35542678	35498183	G G	GTGGGGAG others(11): Show GTGGGGAGCCGGGGCCGCC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(148): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02257.hp2 HG02273.hp2 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp1 HG02735.hp1 HG02738.hp1 HG02886.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18939.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp2 NA18953.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18975.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp2 NA18987.hp2 NA18990.hp2 NA18992.hp1 NA18997.hp2 NA19004.hp1 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19067.hp1 NA19076.hp1 NA19077.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19087.hp2 NA19240.hp1 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0008 a0015	a0001c0001 a0001c0002 a0001c0014 others(11): Show a0001c0001 a0001c0002 a0001c0014 a0001c0022 a0002c0003 a0002c0018 a0003c0005 a0003c0007 a0003c0023 a0004c0004 a0005c0006 a0005c0020 a0008c0010 a0015c0012	a0001c0001t0002 a0001c0001t0010 a0001c0001t0017 others(65): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0017 a0001c0001t0019 a0001c0001t0025 a0001c0001t0028 a0001c0001t0030 a0001c0001t0035 a0001c0001t0050 a0001c0001t0082 a0001c0001t0084 a0001c0001t0130 a0001c0001t0138 a0001c0001t0139 a0001c0001t0140 a0001c0001t0143 a0001c0002t0004 a0001c0002t0006 a0001c0002t0008 a0001c0002t0012 a0001c0002t0016 a0001c0002t0055 a0001c0002t0059 a0001c0002t0080 a0001c0002t0102 a0001c0002t0103 a0001c0002t0104 a0001c0002t0105 a0001c0002t0132 a0001c0014t0112 a0001c0022t0035 a0002c0003t0001 a0002c0003t0011 a0002c0003t0023 a0002c0003t0034 a0002c0003t0041 a0002c0003t0042 a0002c0003t0043 a0002c0003t0049 a0002c0003t0056 a0002c0003t0057 a0002c0003t0072 a0002c0003t0086 a0002c0003t0107 a0002c0003t0120 a0002c0003t0122 a0002c0003t0125 a0002c0018t0001 a0003c0005t0007 a0003c0005t0014 a0003c0005t0015 a0003c0005t0038 a0003c0005t0048 a0003c0005t0053 a0003c0005t0075 a0003c0005t0096 a0003c0005t0097 a0003c0007t0022 a0003c0023t0014 a0004c0004t0003 a0004c0004t0009 a0004c0004t0128 a0005c0006t0005 a0005c0006t0036 a0005c0006t0092 a0005c0020t0002 a0008c0010t0029 a0015c0012t0127	a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0112 others(148): Show a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0134 a0001c0001t0002g0264 a0001c0001t0002g0282 a0001c0001t0002g0285 a0001c0001t0002g0288 a0001c0001t0002g0310 a0001c0001t0002g0324 a0001c0001t0002g0327 a0001c0001t0002g0338 a0001c0001t0002g0345 a0001c0001t0010g0287 a0001c0001t0010g0314 a0001c0001t0010g0315 a0001c0001t0010g0351 a0001c0001t0017g0334 a0001c0001t0019g0007 a0001c0001t0019g0013 a0001c0001t0019g0016 a0001c0001t0025g0061 a0001c0001t0025g0089 a0001c0001t0025g0185 a0001c0001t0028g0031 a0001c0001t0028g0032 a0001c0001t0030g0015 a0001c0001t0030g0019 a0001c0001t0035g0077 a0001c0001t0050g0030 a0001c0001t0082g0056 a0001c0001t0084g0348 a0001c0001t0130g0121 a0001c0001t0138g0051 a0001c0001t0139g0274 a0001c0001t0140g0135 a0001c0001t0143g0308 a0001c0002t0004g0115 a0001c0002t0004g0116 a0001c0002t0004g0262 a0001c0002t0004g0279 a0001c0002t0004g0289 a0001c0002t0004g0300 a0001c0002t0004g0311 a0001c0002t0004g0322 a0001c0002t0004g0323 a0001c0002t0006g0294 a0001c0002t0008g0093 a0001c0002t0008g0095 a0001c0002t0008g0108 a0001c0002t0008g0117 a0001c0002t0008g0183 a0001c0002t0008g0309 a0001c0002t0008g0347 a0001c0002t0012g0320 a0001c0002t0016g0295 a0001c0002t0016g0336 a0001c0002t0055g0012 a0001c0002t0059g0018 a0001c0002t0080g0042 a0001c0002t0102g0219 a0001c0002t0103g0052 a0001c0002t0104g0098 a0001c0002t0105g0357 a0001c0002t0132g0290 a0001c0014t0112g0120 a0001c0022t0035g0076 a0002c0003t0001g0094 a0002c0003t0001g0283 a0002c0003t0001g0284 a0002c0003t0001g0296 a0002c0003t0001g0304 a0002c0003t0001g0305 a0002c0003t0001g0312 a0002c0003t0001g0316 a0002c0003t0001g0318 a0002c0003t0001g0330 a0002c0003t0001g0332 a0002c0003t0001g0335 a0002c0003t0001g0344 a0002c0003t0001g0349 a0002c0003t0001g0350 a0002c0003t0001g0352 a0002c0003t0011g0008 a0002c0003t0011g0011 a0002c0003t0011g0020 a0002c0003t0011g0021 a0002c0003t0011g0025 a0002c0003t0023g0286 a0002c0003t0034g0074 a0002c0003t0034g0075 a0002c0003t0041g0337 a0002c0003t0041g0346 a0002c0003t0042g0208 a0002c0003t0043g0302 a0002c0003t0049g0027 a0002c0003t0056g0014 a0002c0003t0057g0017 a0002c0003t0072g0313 a0002c0003t0086g0319 a0002c0003t0107g0325 a0002c0003t0120g0053 a0002c0003t0122g0146 a0002c0003t0125g0317 a0002c0018t0001g0186 a0003c0005t0007g0096 a0003c0005t0007g0100 a0003c0005t0007g0141 a0003c0005t0007g0145 a0003c0005t0014g0092 a0003c0005t0014g0105 a0003c0005t0014g0261 a0003c0005t0015g0101 a0003c0005t0015g0303 a0003c0005t0038g0157 a0003c0005t0038g0293 a0003c0005t0048g0028 a0003c0005t0053g0010 a0003c0005t0075g0321 a0003c0005t0096g0333 a0003c0005t0097g0298 a0003c0007t0022g0085 a0003c0023t0014g0353 a0004c0004t0003g0107 a0004c0004t0003g0110 a0004c0004t0003g0113 a0004c0004t0003g0114 a0004c0004t0003g0297 a0004c0004t0003g0328 a0004c0004t0003g0331 a0004c0004t0003g0343 a0004c0004t0009g0099 a0004c0004t0009g0102 a0004c0004t0009g0103 a0004c0004t0009g0104 a0004c0004t0009g0106 a0004c0004t0128g0342 a0005c0006t0005g0133 a0005c0006t0005g0263 a0005c0006t0005g0265 a0005c0006t0005g0291 a0005c0006t0005g0301 a0005c0006t0005g0306 a0005c0006t0005g0307 a0005c0006t0005g0329 a0005c0006t0036g0072 a0005c0006t0036g0280 a0005c0006t0092g0275 a0005c0020t0002g0119 a0008c0010t0029g0024 a0015c0012t0127g0292	151	360	0.4194	18	c.87- others(35): Show c.87-18006_87-17989dupGGCGGCCCCGGCTCCCCA	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	2/4			chr17	TogoVar
SLFN12_chr17_35405922_35437500	35434408	G G	GAAGGAAG others(11): Show GAAGGAAGGAAGGAAGGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp2 HG02922.hp2 HG02451.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0195 a0001c0001t0001g0050 a0001c0001t0001g0195	2	426	0.0047	18	c.-22 others(29): Show c.-2262_-2261insTTCCTTCCTTCCTTCCTT	SLFN12	ENSG00000172123.13	transcript	ENST00000304905.10	protein_coding		1909		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35434408	G G	GAAGGAAG others(11): Show GAAGGAAGGAAGGAAGGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0028 a0004c0004t0028	a0004c0004t0028g0039 a0004c0004t0028g0039	1	456	0.0022	18	c.61 others(29): Show c.6186_*6187insTTCCTTCCTTCCTTCCTT	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding		687		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35448042	A A	ATATTATT others(11): Show ATATTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02055.hp1 HG03017.hp2 others(1): Show HG01192.hp1 HG02055.hp1 HG03017.hp2 HG03130.hp2	a0001 a0007 a0030 a0001 a0007 a0030	a0001c0001 a0007c0007 a0030c0069 a0001c0001 a0007c0007 a0030c0069	a0001c0001t0001 a0001c0001t0012 a0007c0007t0001 others(1): Show a0001c0001t0001 a0001c0001t0012 a0007c0007t0001 a0030c0069t0009	a0001c0001t0001g0108 a0001c0001t0012g0107 a0007c0007t0001g0106 others(1): Show a0001c0001t0001g0108 a0001c0001t0012g0107 a0007c0007t0001g0106 a0030c0069t0009g0109	4	456	0.0088	18	c.-16 others(35): Show c.-160-646_-160-629dupATAATAATAATAATAATA	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding	1/5			chr17	TogoVar
SLFN14_chr17_35538985_35565819	35561749	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp2 HG02165.hp2 NA18946.hp2 others(6): Show HG00673.hp2 HG02165.hp2 NA18946.hp2 NA18975.hp2 NA18979.hp2 NA18981.hp2 NA18982.hp2 NA19075.hp1 NA19083.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0030 a0002c0002t0003 a0002c0002t0030	a0002c0002t0003g0004 a0002c0002t0003g0018 a0002c0002t0003g0132 others(1): Show a0002c0002t0003g0004 a0002c0002t0003g0018 a0002c0002t0003g0132 a0002c0002t0030g0133	9	428	0.0210	18	c.-11 others(29): Show c.-1107_-1106insCTTTCTTTTTTTTTTTTT	SLFN14	ENSG00000236320.4	transcript	ENST00000674182.1	protein_coding		931		chr17	TogoVar
SLFN5_chr17_35238072_35278655	35266177	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGCGC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0008 a0008	a0008c0010 a0008c0010	a0008c0010t0142 a0008c0010t0142	a0008c0010t0142g0068 a0008c0010t0142g0068	1	446	0.0022	18	c.29 others(27): Show c.290_*291insTGTGTGTGTGTGTGCGCG	SLFN5	ENSG00000166750.10	transcript	ENST00000299977.9	protein_coding	5/5	291	INFO_REALIGN_3_PRIME	chr17	TogoVar
SLIT1_chr10_96993038_97190959	97119913	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02155.hp2 NA20752.hp1 others(1): Show HG02071.hp2 HG02155.hp2 NA20752.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0006 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0003t0001 a0001c0004t0001	a0001c0001t0001g0105 a0001c0001t0006g0038 a0001c0003t0001g0184 others(1): Show a0001c0001t0001g0105 a0001c0001t0006g0038 a0001c0003t0001g0184 a0001c0004t0001g0117	4	256	0.0156	18	c.413 others(37): Show c.413+37887_413+37904dupTATATATATATATATATA	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	4/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166557	A A	AGGAAGGA others(11): Show AGGAAGGAAAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02559.hp1 HG02895.hp2 others(3): Show HG02451.hp2 HG02559.hp1 HG02895.hp2 NA18998.hp1 NA19043.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0003t0026 a0001c0001t0001 a0001c0001t0004 a0001c0003t0026	a0001c0001t0001g0023 a0001c0001t0001g0110 a0001c0001t0001g0247 others(3): Show a0001c0001t0001g0023 a0001c0001t0001g0110 a0001c0001t0001g0247 a0001c0001t0004g0018 a0001c0001t0004g0019 a0001c0003t0026g0170	6	256	0.0234	18	c.198 others(35): Show c.198-1668_198-1667insCTCTCTCTCTTTCCTTCC	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166557	A A	AGGAAGGA others(11): Show AGGAAGGAAGGAAGGAAAG	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp1 HG02717.hp1 HG01515.hp1 HG01517.hp1 HG02717.hp1	a0001 a0002 a0001 a0002	a0001c0006 a0002c0013 a0001c0006 a0002c0013	a0001c0006t0004 a0002c0013t0006 a0001c0006t0004 a0002c0013t0006	a0001c0006t0004g0204 a0002c0013t0006g0029 a0002c0013t0006g0030 a0001c0006t0004g0204 a0002c0013t0006g0029 a0002c0013t0006g0030	3	256	0.0117	18	c.198 others(35): Show c.198-1668_198-1667insCTTTCCTTCCTTCCTTCC	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166569	G G	GAGAGAAA others(11): Show GAGAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0190 a0001c0003t0006g0190	1	256	0.0039	18	c.198 others(35): Show c.198-1680_198-1679insTTCTTTCTTTCTTTCTCT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166569	G G	GAGAGAGA others(11): Show GAGAGAGAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02965.hp2 NA19079.hp2 HG02965.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0008t0003 a0001c0001t0001 a0001c0008t0003	a0001c0001t0001g0043 a0001c0008t0003g0060 a0001c0001t0001g0043 a0001c0008t0003g0060	2	256	0.0078	18	c.198 others(35): Show c.198-1680_198-1679insTTCTTTCTTTCTCTCTCT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166569	G G	GAGAGAGA others(11): Show GAGAGAGAGAGAGAAAGAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01109.hp2 HG01515.hp2 others(9): Show HG00741.hp2 HG01109.hp2 HG01515.hp2 HG02602.hp1 HG03098.hp2 HG03688.hp1 HG03834.hp2 HG04228.hp2 NA18939.hp1 NA18942.hp1 NA18952.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0001c0008 a0001c0024	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0006t0007 a0001c0008t0003 a0001c0024t0001	a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0167 others(9): Show a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0167 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0242 a0001c0001t0002g0113 a0001c0001t0002g0144 a0001c0002t0001g0256 a0001c0006t0007g0209 a0001c0008t0003g0085 a0001c0024t0001g0252	12	256	0.0469	18	c.198 others(35): Show c.198-1680_198-1679insTTCTTTCTCTCTCTCTCT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166569	G G	GAGAGAGA others(11): Show GAGAGAGAGAGAGAGAGAA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp2 HG01257.hp2 HG01258.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0074 a0001c0004t0001g0127 a0001c0004t0001g0074 a0001c0004t0001g0127	2	256	0.0078	18	c.198 others(35): Show c.198-1680_198-1679insTTCTCTCTCTCTCTCTCT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT2_chr4_20246905_20625561	20417436	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA18983.hp1 HG00558.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0014 a0001c0002t0001 a0001c0001t0014 a0001c0002t0001	a0001c0001t0014g0185 a0001c0002t0001g0118 a0001c0001t0014g0185 a0001c0002t0001g0118	2	230	0.0087	18	c.396 others(37): Show c.396-50311_396-50294dupTATATATATATATATATA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20511587	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00741.hp2 HG01884.hp2 others(1): Show HG00642.hp2 HG00741.hp2 HG01884.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0018 a0001c0001t0002 a0001c0001t0005 a0001c0001t0018	a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0005g0137 others(1): Show a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0005g0137 a0001c0001t0018g0227	4	230	0.0174	18	c.105 others(35): Show c.1058+466_1058+467insTTTTTTTTTTTTTTTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518557	G G	GTGTATAT others(11): Show GTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG03195.hp2 NA18942.hp2 HG01074.hp2 HG03195.hp2 NA18942.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0018 a0001c0001t0031 a0001c0002t0002 a0001c0001t0018 a0001c0001t0031 a0001c0002t0002	a0001c0001t0018g0223 a0001c0001t0031g0015 a0001c0002t0002g0121 a0001c0001t0018g0223 a0001c0001t0031g0015 a0001c0002t0002g0121	3	230	0.0130	18	c.105 others(35): Show c.1059-824_1059-823insGTATATATATATATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518557	G G	GTGTGTAT others(11): Show GTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02970.hp2 HG01109.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0051 a0001c0002t0016 a0001c0001t0051 a0001c0002t0016	a0001c0001t0051g0158 a0001c0002t0016g0052 a0001c0001t0051g0158 a0001c0002t0016g0052	2	230	0.0087	18	c.105 others(35): Show c.1059-824_1059-823insGTGTATATATATATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518557	G G	GTGTGTGT others(11): Show GTGTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0079 a0001c0005t0079	a0001c0005t0079g0162 a0001c0005t0079g0162	1	230	0.0044	18	c.105 others(35): Show c.1059-824_1059-823insGTGTGTGTATATATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518587	A A	ATATATAT others(11): Show ATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0161 a0001c0002t0014g0161	1	230	0.0044	18	c.105 others(35): Show c.1059-794_1059-793insATATATATATATATTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20533855	T T	TACACACC others(11): Show TACACACCGCTACACACAC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01243.hp2 HG01256.hp1 others(11): Show HG00642.hp2 HG01243.hp2 HG01256.hp1 HG02055.hp1 HG02300.hp2 HG02572.hp1 HG02886.hp1 HG02886.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03516.hp2 HG03540.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0007 a0001c0012 a0001c0023	a0001c0001t0005 a0001c0002t0002 a0001c0002t0010 others(7): Show a0001c0001t0005 a0001c0002t0002 a0001c0002t0010 a0001c0002t0022 a0001c0002t0026 a0001c0002t0028 a0001c0005t0079 a0001c0007t0011 a0001c0012t0073 a0001c0023t0001	a0001c0001t0005g0057 a0001c0001t0005g0095 a0001c0001t0005g0137 others(11): Show a0001c0001t0005g0057 a0001c0001t0005g0095 a0001c0001t0005g0137 a0001c0002t0002g0066 a0001c0002t0002g0125 a0001c0002t0010g0215 a0001c0002t0010g0216 a0001c0002t0022g0120 a0001c0002t0026g0011 a0001c0002t0028g0156 a0001c0005t0079g0162 a0001c0007t0011g0214 a0001c0012t0073g0201 a0001c0023t0001g0086	14	230	0.0609	18	c.183 others(35): Show c.1832+146_1832+163dupCCGCTACACACACACACA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	18/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20570731	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0207 a0001c0001t0004g0207	1	230	0.0044	18	c.308 others(37): Show c.3088+1741_3088+1758dupATATATATATATATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	29/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20621126	A A	ACACACAA others(11): Show ACACACAACACCTCGGTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0075 a0001c0002t0075	a0001c0002t0075g0032 a0001c0002t0075g0032	1	230	0.0044	18	c.21 others(29): Show c.2117_*2118insCACACAACACCTCGGTCC	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding		566		chr4	TogoVar
SLIT3_chr5_168656740_169306139	168726338	T T	TGGAGAGG others(11): Show TGGAGAGGGAGGCAGGGAG	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18957.hp1 NA18970.hp2 NA18747.hp1 NA18957.hp1 NA18970.hp2	a0001 a0016 a0001 a0016	a0001c0006 a0001c0008 a0016c0066 a0001c0006 a0001c0008 a0016c0066	a0001c0006t0015 a0001c0008t0013 a0016c0066t0015 a0001c0006t0015 a0001c0008t0013 a0016c0066t0015	a0001c0006t0015g0054 a0001c0008t0013g0056 a0016c0066t0015g0024 a0001c0006t0015g0054 a0001c0008t0013g0056 a0016c0066t0015g0024	3	132	0.0227	18	c.227 others(37): Show c.2271-1872_2271-1855dupCTCCCTGCCTCCCTCTCC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168726376	G G	GAGAGGGA others(11): Show GAGAGGGAGGCAGGGAGGC	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02896.hp1 NA19007.hp2 others(2): Show HG02886.hp2 HG02896.hp1 NA19007.hp2 NA19240.hp1 NA21309.hp1	a0001 a0002 a0011 a0001 a0002 a0011	a0001c0004 a0001c0008 a0002c0002 others(1): Show a0001c0004 a0001c0008 a0002c0002 a0011c0023	a0001c0004t0005 a0001c0008t0003 a0002c0002t0005 others(2): Show a0001c0004t0005 a0001c0008t0003 a0002c0002t0005 a0002c0002t0018 a0011c0023t0005	a0001c0004t0005g0008 a0001c0008t0003g0117 a0002c0002t0005g0082 others(2): Show a0001c0004t0005g0008 a0001c0008t0003g0117 a0002c0002t0005g0082 a0002c0002t0018g0105 a0011c0023t0005g0085	5	132	0.0379	18	c.227 others(37): Show c.2271-1910_2271-1893dupGCCTCCCTGCCTCCCTCT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar

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