Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A3GALT2_chr1_33301766_33326098	NA19089	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0172	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19089	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0193	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19089	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0019	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19089	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0150	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19089	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19089	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0128	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19089	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19089	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19089	hp2	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0036	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19089	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0117	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19089	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0097	JPT	EAS	AADAC	chr3	151809116	151833488
AANAT_chr17_76462603_76475117	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19089	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0092	JPT	EAS	AAR2	chr20	36231478	36261933
ABCA10_chr17_69143007_69233824	NA19089	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0178	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19089	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0031	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA19089	hp1	a0007	a0007c0027	a0007c0027t0002	a0007c0027t0002g0022	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19089	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0141	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19089	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0285	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19089	hp1	a0023	a0023c0023	a0023c0023t0002	a0023c0023t0002g0190	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB7_chrX_75046048_75161283	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19089	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0096	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCD1_chrX_153719856_153749755	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD3_chr1_94413389_94523663	NA19089	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0118	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA19089	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0340	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCF3_chr3_184181199_184199005	NA19089	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCG8_chr2_43833971_43887988	NA19089	hp1	a0001	a0001c0001	a0001c0001t0032	a0001c0001t0032g0070	JPT	EAS	ABCG8	chr2	43833971	43887988
ABCG8_chr2_43833971_43887988	NA19089	hp2	a0003	a0003c0002	a0003c0002t0009	a0003c0002t0009g0202	JPT	EAS	ABCG8	chr2	43833971	43887988
ABHD10_chr3_111974026_111998368	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	NA19089	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0002	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD13_chr13_108213392_108239243	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	NA19089	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0015	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD15_chr17_29555547_29572037	NA19089	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0017	JPT	EAS	ABHD15	chr17	29555547	29572037
ABHD15_chr17_29555547_29572037	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	JPT	EAS	ABHD15	chr17	29555547	29572037
ABHD16A_chr6_31681955_31708324	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	JPT	EAS	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	NA19089	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0007	JPT	EAS	ABHD16A	chr6	31681955	31708324
ABHD16B_chr20_63856498_63867988	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ABHD16B	chr20	63856498	63867988
ABHD16B_chr20_63856498_63867988	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ABHD16B	chr20	63856498	63867988
ABHD1_chr2_27118815_27135812	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	NA19089	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	JPT	EAS	ABHD1	chr2	27118815	27135812
ABHD2_chr15_89083456_89207355	NA19089	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	JPT	EAS	ABHD2	chr15	89083456	89207355
ABHD2_chr15_89083456_89207355	NA19089	hp2	a0002	a0002c0005	a0002c0005t0005	a0002c0005t0005g0114	JPT	EAS	ABHD2	chr15	89083456	89207355