Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view AGXT2 191 63 50 31 0 0 0.740 0.244 0.194 0.120 0.000 0.000 chr5 34993102 35052949
view AGXT 221 86 32 15 0 0 0.857 0.333 0.124 0.058 0.000 0.000 chr2 240863824 240885500
view AHCTF1 187 61 52 30 0 0 0.725 0.236 0.202 0.116 0.000 0.000 chr1 246834098 246936948
view AHCYL1 174 51 67 43 0 0 0.674 0.198 0.260 0.167 0.000 0.000 chr1 109979765 110028742
view AHCYL2 145 41 68 46 0 0 0.562 0.159 0.264 0.178 0.000 0.000 chr7 129220030 129435211
view AHCY 149 42 90 52 0 0 0.578 0.163 0.349 0.202 0.000 0.000 chr20 34275268 34308355
view AHDC1 89 7 124 77 0 0 0.345 0.027 0.481 0.298 0.000 0.000 chr1 27529245 27609144
view AHI1 109 19 110 65 0 0 0.422 0.074 0.426 0.252 0.000 0.000 chr6 135278532 135502740
view AHNAK2 177 53 64 42 0 0 0.686 0.205 0.248 0.163 0.000 0.000 chr14 104932253 104983374
view AHNAK 92 14 135 72 0 0 0.357 0.054 0.523 0.279 0.000 0.000 chr11 62510902 62551806
view AHRR 133 30 67 35 0 0 0.516 0.116 0.260 0.136 0.000 0.000 chr5 316714 443285
view AHR 184 59 60 37 0 0 0.713 0.229 0.233 0.143 0.000 0.000 chr7 17293652 17351147
view AHSA1 153 33 98 66 0 0 0.593 0.128 0.380 0.256 0.000 0.000 chr14 77453093 77474472
view AHSG 219 76 34 25 2 1 0.849 0.295 0.132 0.097 0.008 0.004 chr3 186608060 186626318
view AHSP 193 61 65 44 0 0 0.748 0.236 0.252 0.171 0.000 0.000 chr16 31522900 31533803
view AICDA 228 84 28 19 0 0 0.884 0.326 0.109 0.074 0.000 0.000 chr12 8597170 8617859
view AIDA 183 58 65 42 0 0 0.709 0.225 0.252 0.163 0.000 0.000 chr1 222663013 222717491
view AIF1L 211 71 36 23 0 0 0.818 0.275 0.140 0.089 0.000 0.000 chr9 131091531 131128144
view AIF1 218 74 40 31 0 0 0.845 0.287 0.155 0.120 0.000 0.000 chr6 31610234 31622015
view AIFM1 65 15 185 83 0 0 0.252 0.058 0.717 0.322 0.000 0.000 chrX 130124362 130170841
view AIFM2 233 83 20 18 0 0 0.903 0.322 0.078 0.070 0.000 0.000 chr10 70107271 70137825
view AIFM3 227 80 24 18 0 0 0.880 0.310 0.093 0.070 0.000 0.000 chr22 20962255 20986358
view AIG1 101 25 89 44 0 0 0.391 0.097 0.345 0.171 0.000 0.000 chr6 143055889 143346058
view AIM2 196 71 56 30 0 0 0.760 0.275 0.217 0.116 0.000 0.000 chr1 159057484 159081766
view AIMP1 191 71 56 28 0 0 0.740 0.275 0.217 0.109 0.000 0.000 chr4 106311550 106354456
view AIMP2 220 79 36 24 0 0 0.853 0.306 0.140 0.093 0.000 0.000 chr7 6004272 6028834
view AIPL1 226 80 28 21 2 2 0.876 0.310 0.109 0.081 0.008 0.008 chr17 6418738 6440121
view AIP 170 52 81 46 0 0 0.659 0.202 0.314 0.178 0.000 0.000 chr11 67478026 67496103
view AIRE 212 72 41 30 0 0 0.822 0.279 0.159 0.116 0.000 0.000 chr21 44280876 44303648
view AJAP1 166 40 41 35 0 0 0.643 0.155 0.159 0.136 0.000 0.000 chr1 4649609 4797534
view AJM1 181 49 70 49 0 0 0.702 0.190 0.271 0.190 0.000 0.000 chr9 136837478 136853801
view AJUBA 166 35 83 64 0 0 0.643 0.136 0.322 0.248 0.000 0.000 chr14 22966177 22987551
view AK1 212 67 43 35 0 0 0.822 0.260 0.167 0.136 0.000 0.000 chr9 127861486 127882675
view AK2 174 57 73 42 0 0 0.674 0.221 0.283 0.163 0.000 0.000 chr1 33002986 33041883
view AK3 230 83 22 17 0 0 0.891 0.322 0.085 0.066 0.000 0.000 chr9 4704556 4746202
view AK4 149 50 85 45 0 0 0.578 0.194 0.329 0.174 0.000 0.000 chr1 65143203 65237145
view AK5 141 50 62 34 0 0 0.547 0.194 0.240 0.132 0.000 0.000 chr1 77277019 77564966
view AK6 210 77 44 26 0 0 0.814 0.298 0.171 0.101 0.000 0.000 chr5 69345984 69374520
view AK7 157 42 75 45 0 0 0.609 0.163 0.291 0.174 0.000 0.000 chr14 96387128 96494427
view AK8 132 32 66 40 0 0 0.512 0.124 0.256 0.155 0.000 0.000 chr9 132720578 132883284
view AK9 188 65 52 29 0 0 0.729 0.252 0.202 0.112 0.000 0.000 chr6 109487855 109696202
view AKAIN1 209 77 39 22 0 0 0.810 0.298 0.151 0.085 0.000 0.000 chr18 5137911 5202257
view AKAP10 138 32 98 59 0 0 0.535 0.124 0.380 0.229 0.000 0.000 chr17 19899302 19982828
view AKAP11 188 65 58 34 0 0 0.729 0.252 0.225 0.132 0.000 0.000 chr13 42267152 42328261
view AKAP12 157 48 64 34 0 0 0.609 0.186 0.248 0.132 0.000 0.000 chr6 151234967 151363559
view AKAP13 156 49 61 36 0 0 0.605 0.190 0.236 0.140 0.000 0.000 chr15 85375603 85754355
view AKAP14 90 26 156 69 0 0 0.349 0.101 0.605 0.267 0.000 0.000 chrX 119890893 119925716
view AKAP17A 113 21 80 37 0 0 0.438 0.081 0.310 0.143 0.000 0.000 chrX 1586604 1607520
view AKAP1 197 69 54 32 0 0 0.764 0.267 0.209 0.124 0.000 0.000 chr17 57080246 57126344
view AKAP3 208 76 44 27 0 0 0.806 0.295 0.171 0.105 0.000 0.000 chr12 4610518 4654051