Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
EPHX4 117 19 118 68 0 0 0.453 0.074 0.457 0.264 0.000 0.000 chr1 92024985 92068538
EPM2AIP1 202 70 55 34 0 0 0.783 0.271 0.213 0.132 0.000 0.000 chr3 36980043 36998131
EPM2A 159 53 84 46 0 0 0.616 0.205 0.326 0.178 0.000 0.000 chr6 145620305 145740520
EPN1 0 0 11 1 0 0 0.000 0.000 0.043 0.004 0.000 0.000 chr19 55670226 55714533
EPN2 140 38 99 58 0 0 0.543 0.147 0.384 0.225 0.000 0.000 chr17 19232366 19341715
EPN3 174 42 77 57 0 0 0.674 0.163 0.298 0.221 0.000 0.000 chr17 50527735 50548750
EPOP 175 55 81 48 0 0 0.678 0.213 0.314 0.186 0.000 0.000 chr17 38666703 38679957
EPOR 201 64 52 37 0 0 0.779 0.248 0.202 0.143 0.000 0.000 chr19 11372207 11389314
EPO 189 59 66 43 0 0 0.733 0.229 0.256 0.167 0.000 0.000 chr7 100715468 100728700
EPPIN 218 79 39 25 0 0 0.845 0.306 0.151 0.097 0.000 0.000 chr20 45535626 45552401
EPPK1 211 67 34 25 0 0 0.818 0.260 0.132 0.097 0.000 0.000 chr8 143852324 143883467
EPRS1 178 58 61 33 0 0 0.690 0.225 0.236 0.128 0.000 0.000 chr1 219963600 220051505
EPS15L1 137 33 82 51 0 0 0.531 0.128 0.318 0.198 0.000 0.000 chr19 16350247 16476970
EPS15 75 2 141 88 0 0 0.291 0.008 0.547 0.341 0.000 0.000 chr1 51349263 51524266
EPS8L1 169 42 70 46 0 0 0.655 0.163 0.271 0.178 0.000 0.000 chr19 55070869 55092923
EPS8L2 202 61 42 32 0 0 0.783 0.236 0.163 0.124 0.000 0.000 chr11 701231 732727
EPS8L3 212 77 43 27 0 0 0.822 0.298 0.167 0.105 0.000 0.000 chr1 109745080 109768923
EPS8 50 6 143 71 0 0 0.194 0.023 0.554 0.275 0.000 0.000 chr12 15615134 15794388
EPSTI1 175 57 57 36 0 0 0.678 0.221 0.221 0.140 0.000 0.000 chr13 42881388 42997241
EPX 201 70 54 33 0 0 0.779 0.271 0.209 0.128 0.000 0.000 chr17 58187726 58210174
EPYC 172 63 67 30 1 1 0.667 0.244 0.260 0.116 0.004 0.004 chr12 90958682 91009972
EQTN 222 77 28 21 1 0 0.860 0.298 0.109 0.081 0.004 0.000 chr9 27279654 27302150
ERAL1 189 74 66 28 0 0 0.733 0.287 0.256 0.109 0.000 0.000 chr17 28850016 28866061
ERAP1 207 72 39 24 0 0 0.802 0.279 0.151 0.093 0.000 0.000 chr5 96769484 96812945
ERAP2 198 71 48 27 0 0 0.767 0.275 0.186 0.105 0.000 0.000 chr5 96871500 96924703
ERAS 91 22 163 79 0 0 0.353 0.085 0.632 0.306 0.000 0.000 chrX 48821513 48834869
ERBB2 159 51 91 50 0 0 0.616 0.198 0.353 0.194 0.000 0.000 chr17 39695064 39733658
ERBB3 195 57 48 34 0 0 0.756 0.221 0.186 0.132 0.000 0.000 chr12 56075165 56108505
ERBB4 28 0 128 66 0 0 0.109 0.000 0.496 0.256 0.000 0.000 chr2 211370717 212543802
ERBIN 152 61 80 31 0 0 0.589 0.236 0.310 0.120 0.000 0.000 chr5 65921575 66087546
ERC1 80 4 106 73 0 0 0.310 0.016 0.411 0.283 0.000 0.000 chr12 986223 1500931
ERC2 36 1 119 58 0 0 0.140 0.004 0.461 0.225 0.000 0.000 chr3 55503311 56473467
ERCC1 209 72 43 29 0 0 0.810 0.279 0.167 0.112 0.000 0.000 chr19 45402334 45428917
ERCC2 205 66 47 33 0 0 0.795 0.256 0.182 0.128 0.000 0.000 chr19 45344837 45375573
ERCC3 174 51 66 44 0 0 0.674 0.198 0.256 0.171 0.000 0.000 chr2 127252290 127299144
ERCC4 169 55 69 38 0 0 0.655 0.213 0.267 0.147 0.000 0.000 chr16 13915154 13957348
ERCC5 196 68 51 30 0 0 0.760 0.264 0.198 0.116 0.000 0.000 chr13 102841032 102880995
ERCC6L2 195 68 51 31 0 0 0.756 0.264 0.198 0.120 0.000 0.000 chr9 95870691 96023447
ERCC6L 78 23 172 78 0 0 0.302 0.089 0.667 0.302 0.000 0.000 chrX 72199665 72244027
ERCC6 193 74 54 24 0 0 0.748 0.287 0.209 0.093 0.000 0.000 chr10 49449470 49544121
ERCC6 200 76 49 24 0 0 0.775 0.295 0.190 0.093 0.000 0.000 chr10 49510198 49544121
ERCC8 150 41 92 56 0 0 0.581 0.159 0.357 0.217 0.000 0.000 chr5 60861454 60950070
EREG 178 62 69 36 0 0 0.690 0.240 0.267 0.140 0.000 0.000 chr4 74360145 74393749
ERFE 227 86 29 18 1 0 0.880 0.333 0.112 0.070 0.004 0.000 chr2 238153970 238173890
ERFL 164 44 63 38 0 0 0.636 0.171 0.244 0.147 0.000 0.000 chr19 41902704 41933449
ERF 133 31 119 69 0 0 0.516 0.120 0.461 0.267 0.000 0.000 chr19 42242569 42260128
ERG28 209 79 46 23 0 0 0.810 0.306 0.178 0.089 0.000 0.000 chr14 75644791 75665876
ERGIC1 166 43 52 37 0 0 0.643 0.167 0.202 0.143 0.000 0.000 chr5 172829251 172957683
ERGIC2 202 78 51 24 0 0 0.783 0.302 0.198 0.093 0.000 0.000 chr12 29332352 29386172
ERGIC3 181 58 66 39 0 0 0.702 0.225 0.256 0.151 0.000 0.000 chr20 35537078 35562634