Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ERG 179 59 45 23 0 0 0.694 0.229 0.174 0.089 0.000 0.000 chr21 38375036 38503477
ERH 198 68 58 35 0 0 0.767 0.264 0.225 0.136 0.000 0.000 chr14 69375128 69403299
ERI1 212 76 35 20 0 0 0.822 0.295 0.136 0.078 0.000 0.000 chr8 8997897 9038338
ERI2 205 68 48 33 1 0 0.795 0.264 0.186 0.128 0.004 0.000 chr16 20791340 20811472
ERI3 169 58 72 37 0 0 0.655 0.225 0.279 0.143 0.000 0.000 chr1 44216070 44360257
ERICH1 188 50 52 39 0 0 0.729 0.194 0.202 0.151 0.000 0.000 chr8 659200 736224
ERICH2 194 69 58 35 0 0 0.752 0.267 0.225 0.136 0.000 0.000 chr2 170765378 170803977
ERICH3 144 37 90 58 0 0 0.558 0.143 0.349 0.225 0.000 0.000 chr1 74563123 74678792
ERICH4 210 76 46 27 0 0 0.814 0.295 0.178 0.105 0.000 0.000 chr19 41438156 41449765
ERICH5 220 79 27 17 0 0 0.853 0.306 0.105 0.066 0.000 0.000 chr8 98059568 98098609
ERICH6B 162 45 68 48 0 0 0.628 0.174 0.264 0.186 0.000 0.000 chr13 45536294 45620739
ERICH6 173 49 59 35 0 0 0.671 0.190 0.229 0.136 0.000 0.000 chr3 150654885 150708920
ERLEC1 186 64 65 36 1 1 0.721 0.248 0.252 0.140 0.004 0.004 chr2 53782044 53823796
ERLIN1 192 74 58 28 0 0 0.744 0.287 0.225 0.109 0.000 0.000 chr10 100145094 100191029
ERLIN2 112 27 132 69 0 0 0.434 0.105 0.512 0.267 0.000 0.000 chr8 37731634 37763422
ERMAP 192 65 51 29 0 0 0.744 0.252 0.198 0.112 0.000 0.000 chr1 42812122 42849991
ERMARD 189 62 58 36 0 0 0.733 0.240 0.225 0.140 0.000 0.000 chr6 169746622 169786600
ERMN 183 52 71 50 1 0 0.709 0.202 0.275 0.194 0.004 0.000 chr2 157313631 157330824
ERMP1 188 62 63 39 0 0 0.729 0.240 0.244 0.151 0.000 0.000 chr9 5779572 5838117
ERN1 116 19 106 61 0 0 0.450 0.074 0.411 0.236 0.000 0.000 chr17 64034142 64135144
ERN2 205 72 45 27 0 0 0.795 0.279 0.174 0.105 0.000 0.000 chr16 23685310 23718222
ERO1A 198 70 49 30 0 0 0.767 0.271 0.190 0.116 0.000 0.000 chr14 52634915 52700558
ERO1B 197 65 44 32 0 0 0.764 0.252 0.171 0.124 0.000 0.000 chr1 236210101 236286958
ERP27 200 63 46 31 0 0 0.775 0.244 0.178 0.120 0.000 0.000 chr12 14909039 14943537
ERP29 198 72 52 26 0 0 0.767 0.279 0.202 0.101 0.000 0.000 chr12 112008426 112028449
ERP44 109 17 115 73 0 0 0.422 0.066 0.446 0.283 0.000 0.000 chr9 99974185 100104000
ERRFI1 200 77 55 26 0 0 0.775 0.298 0.213 0.101 0.000 0.000 chr1 8006727 8031309
ERV3-1 228 85 26 18 0 0 0.884 0.329 0.101 0.070 0.000 0.000 chr7 64985356 65011687
ERVFRD-1 212 77 45 28 0 0 0.822 0.298 0.174 0.109 0.000 0.000 chr6 11097489 11116725
ERVH48-1 209 77 43 23 2 1 0.810 0.298 0.167 0.089 0.008 0.004 chr21 42911803 42930630
ERVK3-1 211 71 44 31 0 0 0.818 0.275 0.171 0.120 0.000 0.000 chr19 58300377 58321812
ERVMER34-1 195 61 59 40 0 0 0.756 0.236 0.229 0.155 0.000 0.000 chr4 52737553 52756425
ERVV-1 201 65 52 37 1 0 0.779 0.252 0.202 0.143 0.004 0.000 chr19 53008921 53021123
ERVV-2 222 76 31 24 0 0 0.860 0.295 0.120 0.093 0.000 0.000 chr19 53039740 53056680
ERVW-1 210 76 45 26 0 0 0.814 0.295 0.174 0.101 0.000 0.000 chr7 92463380 92482946
ESAM 214 73 40 28 0 0 0.829 0.283 0.155 0.109 0.000 0.000 chr11 124748126 124767290
ESCO1 154 42 91 53 0 0 0.597 0.163 0.353 0.205 0.000 0.000 chr18 21524284 21605704
ESCO2 189 68 63 34 0 0 0.733 0.264 0.244 0.132 0.000 0.000 chr8 27769554 27810316
ESD 202 73 46 26 0 0 0.783 0.283 0.178 0.101 0.000 0.000 chr13 46766256 46802161
ESF1 194 71 56 29 0 0 0.752 0.275 0.217 0.112 0.000 0.000 chr20 13709325 13789919
ESM1 222 80 34 24 2 1 0.860 0.310 0.132 0.093 0.008 0.004 chr5 54972867 54990593
ESPL1 166 50 74 41 0 0 0.643 0.194 0.287 0.159 0.000 0.000 chr12 53263299 53298638
ESPNL 203 65 43 30 0 0 0.787 0.252 0.167 0.116 0.000 0.000 chr2 238095340 238138287
ESPN 137 25 102 66 0 0 0.531 0.097 0.395 0.256 0.000 0.000 chr1 6419776 6465944
ESR1 124 37 70 40 0 0 0.481 0.143 0.271 0.155 0.000 0.000 chr6 151802682 152108274
ESR2 183 62 57 34 0 0 0.709 0.240 0.221 0.132 0.000 0.000 chr14 64223317 64299371
ESRP1 186 58 59 38 0 0 0.721 0.225 0.229 0.147 0.000 0.000 chr8 94636174 94712466
ESRP2 136 34 118 68 1 1 0.527 0.132 0.457 0.264 0.004 0.004 chr16 68224033 68241127
ESRRA 193 61 57 37 0 0 0.748 0.236 0.221 0.143 0.000 0.000 chr11 64300524 64321743
ESRRB 158 50 49 33 0 0 0.612 0.194 0.190 0.128 0.000 0.000 chr14 76371137 76506837