Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ESRRG 142 46 54 29 0 0 0.550 0.178 0.209 0.112 0.000 0.000 chr1 216498251 216728429
ESS2 215 75 37 25 0 0 0.833 0.291 0.143 0.097 0.000 0.000 chr22 19125279 19149651
ESX1 95 28 156 70 0 0 0.368 0.109 0.605 0.271 0.000 0.000 chrX 104245038 104259933
ESYT1 184 59 61 37 0 0 0.713 0.229 0.236 0.143 0.000 0.000 chr12 56123267 56149674
ESYT2 184 67 60 33 0 0 0.713 0.260 0.233 0.128 0.000 0.000 chr7 158725997 158834509
ESYT3 168 45 78 51 0 0 0.651 0.174 0.302 0.198 0.000 0.000 chr3 138429616 138484925
ETAA1 196 68 56 33 0 0 0.760 0.264 0.217 0.128 0.000 0.000 chr2 67392333 67417089
ETDA 105 37 150 65 0 0 0.407 0.143 0.581 0.252 0.000 0.000 chrX 135247061 135258583
ETDB 95 26 156 75 1 1 0.368 0.101 0.605 0.291 0.004 0.004 chrX 135113955 135125526
ETDC 91 35 162 69 1 0 0.353 0.136 0.628 0.267 0.004 0.000 chrX 135304480 135314659
ETF1 166 44 75 49 0 0 0.643 0.171 0.291 0.190 0.000 0.000 chr5 138501095 138548236
ETFA 167 53 73 44 0 0 0.647 0.205 0.283 0.171 0.000 0.000 chr15 76210353 76316469
ETFBKMT 225 80 27 20 1 0 0.872 0.310 0.105 0.078 0.004 0.000 chr12 31654688 31678114
ETFB 217 75 37 26 0 0 0.841 0.291 0.143 0.101 0.000 0.000 chr19 51340169 51371388
ETFDH 148 40 93 53 0 0 0.574 0.155 0.360 0.205 0.000 0.000 chr4 158667296 158714623
ETFRF1 194 62 60 40 0 0 0.752 0.240 0.233 0.155 0.000 0.000 chr12 25190237 25210143
ETHE1 203 66 48 33 0 0 0.787 0.256 0.186 0.128 0.000 0.000 chr19 43501719 43532201
ETNK1 158 49 82 42 0 0 0.612 0.190 0.318 0.163 0.000 0.000 chr12 22620171 22695665
ETNK2 210 75 44 27 0 0 0.814 0.291 0.171 0.105 0.000 0.000 chr1 204126062 204157044
ETNPPL 188 62 62 38 1 0 0.729 0.240 0.240 0.147 0.004 0.000 chr4 108737053 108768053
ETS1 142 33 77 50 0 0 0.550 0.128 0.298 0.194 0.000 0.000 chr11 128453765 128592558
ETS2 212 70 42 31 0 0 0.822 0.271 0.163 0.120 0.000 0.000 chr21 38800929 38829955
ETV1 159 47 67 41 0 0 0.616 0.182 0.260 0.159 0.000 0.000 chr7 13886229 13994666
ETV2 218 74 38 29 0 0 0.845 0.287 0.147 0.112 0.000 0.000 chr19 35636745 35649871
ETV3L 231 83 26 21 0 0 0.895 0.322 0.101 0.081 0.000 0.000 chr1 157087043 157104808
ETV3 201 69 52 33 0 0 0.779 0.267 0.202 0.128 0.000 0.000 chr1 157116191 157143395
ETV4 198 66 48 30 0 0 0.767 0.256 0.186 0.116 0.000 0.000 chr17 43522846 43551340
ETV5 169 61 70 35 0 0 0.655 0.236 0.271 0.136 0.000 0.000 chr3 186041314 186114089
ETV6 130 34 52 33 0 0 0.504 0.132 0.202 0.128 0.000 0.000 chr12 11644674 11900377
ETV7 230 82 25 20 1 1 0.891 0.318 0.097 0.078 0.004 0.004 chr6 36361194 36392669
EVA1A 191 60 54 36 0 0 0.740 0.233 0.209 0.140 0.000 0.000 chr2 75487318 75565939
EVA1B 202 57 55 47 0 0 0.783 0.221 0.213 0.182 0.000 0.000 chr1 36317030 36328645
EVA1C 172 51 63 39 0 0 0.667 0.198 0.244 0.151 0.000 0.000 chr21 32407706 32520387
EVC2 145 36 55 36 0 0 0.562 0.140 0.213 0.140 0.000 0.000 chr4 5557439 5713559
EVC 184 56 39 29 0 0 0.713 0.217 0.151 0.112 0.000 0.000 chr4 5706201 5819305
EVI2A 188 66 66 35 1 1 0.729 0.256 0.256 0.136 0.004 0.004 chr17 31311410 31326622
EVI2B 185 68 69 35 1 1 0.717 0.264 0.267 0.136 0.004 0.004 chr17 31298770 31319054
EVI5L 197 61 51 36 0 0 0.764 0.236 0.198 0.140 0.000 0.000 chr19 7825218 7869976
EVI5 83 8 148 82 0 0 0.322 0.031 0.574 0.318 0.000 0.000 chr1 92503696 92790108
EVL 176 56 66 43 0 0 0.682 0.217 0.256 0.167 0.000 0.000 chr14 100060422 100149236
EVPLL 203 67 48 32 0 0 0.787 0.260 0.186 0.124 0.000 0.000 chr17 18372778 18394647
EVPL 201 65 49 34 0 0 0.779 0.252 0.190 0.132 0.000 0.000 chr17 76001845 76032306
EVX1 198 70 55 31 1 0 0.767 0.271 0.213 0.120 0.004 0.000 chr7 27237802 27252830
EVX2 214 81 43 23 0 0 0.829 0.314 0.167 0.089 0.000 0.000 chr2 176072472 176088962
EWSR1 194 67 48 27 0 0 0.752 0.260 0.186 0.105 0.000 0.000 chr22 29263268 29305521
EXD1 158 42 77 44 0 0 0.612 0.163 0.298 0.171 0.000 0.000 chr15 41177728 41235757
EXD2 116 13 125 84 0 0 0.450 0.050 0.484 0.326 0.000 0.000 chr14 69186498 69249018
EXD3 40 4 83 22 0 0 0.155 0.016 0.322 0.085 0.000 0.000 chr9 137301896 137428162
EXO1 207 72 41 28 0 0 0.802 0.279 0.159 0.109 0.000 0.000 chr1 241843204 241894939
EXO5 202 70 52 33 0 0 0.783 0.271 0.202 0.128 0.000 0.000 chr1 40503767 40521038