Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
EXOC1L 201 69 55 34 0 0 0.779 0.267 0.213 0.132 0.000 0.000 chr4 55814790 55842489
EXOC1 187 68 65 34 0 0 0.725 0.264 0.252 0.132 0.000 0.000 chr4 55848648 55910086
EXOC2 135 37 67 39 0 0 0.523 0.143 0.260 0.151 0.000 0.000 chr6 480154 698139
EXOC3L1 156 36 100 67 0 0 0.605 0.140 0.388 0.260 0.000 0.000 chr16 67179379 67195136
EXOC3L2 177 47 64 45 0 0 0.686 0.182 0.248 0.174 0.000 0.000 chr19 45207370 45250407
EXOC3L4 201 59 44 34 0 0 0.779 0.229 0.171 0.132 0.000 0.000 chr14 103089725 103115559
EXOC3 208 69 43 31 0 0 0.806 0.267 0.167 0.120 0.000 0.000 chr5 438176 472290
EXOC4 50 10 99 52 0 0 0.194 0.039 0.384 0.202 0.000 0.000 chr7 133248078 134070761
EXOC5 106 21 117 66 0 0 0.411 0.081 0.453 0.256 0.000 0.000 chr14 57195507 57273905
EXOC6B 51 1 162 92 0 0 0.198 0.004 0.628 0.357 0.000 0.000 chr2 72170984 72831033
EXOC6 143 43 88 48 0 0 0.554 0.167 0.341 0.186 0.000 0.000 chr10 92843520 93064490
EXOC7 182 61 68 37 0 0 0.705 0.236 0.264 0.143 0.000 0.000 chr17 76076016 76108787
EXOC8 193 70 63 33 0 0 0.748 0.271 0.244 0.128 0.000 0.000 chr1 231327753 231342852
EXOG 205 79 45 21 0 0 0.795 0.306 0.174 0.081 0.000 0.000 chr3 38491340 38531303
EXOSC10 141 33 100 63 0 0 0.547 0.128 0.388 0.244 0.000 0.000 chr1 11061618 11104869
EXOSC1 214 78 40 23 1 1 0.829 0.302 0.155 0.089 0.004 0.004 chr10 97430909 97451006
EXOSC2 212 71 39 27 0 0 0.822 0.275 0.151 0.105 0.000 0.000 chr9 130688780 130709892
EXOSC3 215 83 42 21 0 0 0.833 0.322 0.163 0.081 0.000 0.000 chr9 37774714 37790064
EXOSC4 150 25 90 65 1 1 0.581 0.097 0.349 0.252 0.004 0.004 chr8 144073672 144085648
EXOSC5 197 66 58 37 0 0 0.764 0.256 0.225 0.143 0.000 0.000 chr19 41381374 41402359
EXOSC6 209 74 47 29 0 0 0.810 0.287 0.182 0.112 0.000 0.000 chr16 70241778 70256940
EXOSC7 169 44 71 48 0 0 0.655 0.171 0.275 0.186 0.000 0.000 chr3 44971244 45016471
EXOSC8 194 63 62 40 0 0 0.752 0.244 0.240 0.155 0.000 0.000 chr13 36995786 37014614
EXOSC9 199 66 58 38 0 0 0.771 0.256 0.225 0.147 0.000 0.000 chr4 121796323 121822021
EXPH5 156 41 85 55 0 0 0.605 0.159 0.329 0.213 0.000 0.000 chr11 108500435 108598768
EXT1 95 22 94 53 0 0 0.368 0.085 0.364 0.205 0.000 0.000 chr8 117789490 118116826
EXT2 166 62 69 33 0 0 0.643 0.240 0.267 0.128 0.000 0.000 chr11 44090678 44256962
EXTL1 185 52 65 46 0 0 0.717 0.202 0.252 0.178 0.000 0.000 chr1 26016775 26041464
EXTL2 204 66 43 29 0 0 0.791 0.256 0.167 0.112 0.000 0.000 chr1 100867391 100899842
EXTL3 189 71 60 31 0 0 0.733 0.275 0.233 0.120 0.000 0.000 chr8 28696501 28760599
EYA1 115 28 94 57 0 0 0.446 0.109 0.364 0.221 0.000 0.000 chr8 71192433 71367069
EYA2 118 34 73 33 0 0 0.457 0.132 0.283 0.128 0.000 0.000 chr20 46889843 47193844
EYA3 195 71 54 30 0 0 0.756 0.275 0.209 0.116 0.000 0.000 chr1 27965344 28093610
EYA4 131 34 68 39 0 0 0.508 0.132 0.264 0.151 0.000 0.000 chr6 133236357 133537128
EYS 12 0 113 61 0 0 0.047 0.000 0.438 0.236 0.000 0.000 chr6 63714980 65712226
EZH1 166 54 81 45 0 0 0.643 0.209 0.314 0.174 0.000 0.000 chr17 42695275 42750040
EZH2 189 67 52 31 0 0 0.733 0.260 0.202 0.120 0.000 0.000 chr7 148802383 148889291
EZHIP 83 24 172 79 0 0 0.322 0.093 0.667 0.306 0.000 0.000 chrX 51401948 51413843
EZR 155 35 81 55 0 0 0.601 0.136 0.314 0.213 0.000 0.000 chr6 158760748 158824368
F10 205 68 44 28 0 0 0.795 0.264 0.171 0.109 0.000 0.000 chr13 113117799 113154529
F11R 195 73 55 27 0 0 0.756 0.283 0.213 0.105 0.000 0.000 chr1 160990211 161026152
F11 227 79 29 25 0 0 0.880 0.306 0.112 0.097 0.000 0.000 chr4 186261189 186294681
F12 226 80 29 25 3 0 0.876 0.310 0.112 0.097 0.012 0.000 chr5 177397141 177414564
F13A1 145 39 55 34 0 0 0.562 0.151 0.213 0.132 0.000 0.000 chr6 6139084 6325662
F13B 170 58 77 41 0 0 0.659 0.225 0.298 0.159 0.000 0.000 chr1 197033741 197072260
F2RL1 209 69 44 31 0 0 0.810 0.267 0.171 0.120 0.000 0.000 chr5 76814030 76840315
F2RL2 236 90 18 13 1 0 0.915 0.349 0.070 0.050 0.004 0.000 chr5 76610482 76628403
F2RL3 199 66 53 33 0 0 0.771 0.256 0.205 0.128 0.000 0.000 chr19 16883999 16897606
F2R 210 70 43 31 0 0 0.814 0.271 0.167 0.120 0.000 0.000 chr5 76711126 76740770
F2 174 58 75 42 0 0 0.674 0.225 0.291 0.163 0.000 0.000 chr11 46714213 46744506