Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view F3 230 86 28 19 0 0 0.891 0.333 0.109 0.074 0.000 0.000 chr1 94524173 94546759
view F5 152 43 77 47 0 0 0.589 0.167 0.298 0.182 0.000 0.000 chr1 169506951 169591481
view F7 199 63 46 31 1 0 0.771 0.244 0.178 0.120 0.004 0.000 chr13 113100791 113125685
view F8A1 100 30 156 73 0 0 0.388 0.116 0.605 0.283 0.000 0.000 chrX 154881355 154893061
view F8A2 77 17 155 70 0 0 0.298 0.066 0.601 0.271 0.000 0.000 chrX 155377095 155388801
view F8A3 78 20 161 72 0 0 0.302 0.078 0.624 0.279 0.000 0.000 chrX 155451914 155463620
view F8 54 8 187 86 0 0 0.209 0.031 0.725 0.333 0.000 0.000 chrX 154830792 155027723
view F9 66 13 182 84 0 0 0.256 0.050 0.705 0.326 0.000 0.000 chrX 139525739 139568459
view FA2H 193 62 48 33 0 0 0.748 0.240 0.186 0.128 0.000 0.000 chr16 74707969 74779820
view FAAH2 76 20 171 78 0 0 0.295 0.078 0.663 0.302 0.000 0.000 chrX 57281706 57494193
view FAAH 184 63 65 35 0 0 0.713 0.244 0.252 0.136 0.000 0.000 chr1 46389317 46418845
view FAAP100 217 72 33 26 0 0 0.841 0.279 0.128 0.101 0.000 0.000 chr17 81534891 81557353
view FAAP20 195 61 62 43 0 0 0.756 0.236 0.240 0.167 0.000 0.000 chr1 2184548 2199772
view FAAP24 225 81 30 21 0 0 0.872 0.314 0.116 0.081 0.000 0.000 chr19 32967242 32983229
view FABP12 207 73 49 32 2 0 0.802 0.283 0.190 0.124 0.008 0.000 chr8 81519981 81538867
view FABP1 233 87 25 18 0 0 0.903 0.337 0.097 0.070 0.000 0.000 chr2 88117982 88133062
view FABP2 209 76 47 27 0 0 0.810 0.295 0.182 0.105 0.000 0.000 chr4 119312250 119327138
view FABP3 193 69 61 34 0 0 0.748 0.267 0.236 0.132 0.000 0.000 chr1 31360253 31378076
view FABP4 202 69 51 33 1 0 0.783 0.267 0.198 0.128 0.004 0.000 chr8 81473419 81488233
view FABP5 132 34 124 70 1 0 0.512 0.132 0.481 0.271 0.004 0.000 chr8 81275536 81289775
view FABP6 237 92 20 12 0 0 0.919 0.357 0.078 0.047 0.000 0.000 chr5 160224506 160243716
view FABP7 239 93 18 11 0 0 0.926 0.360 0.070 0.043 0.000 0.000 chr6 122774716 122789074
view FABP9 214 79 43 26 1 0 0.829 0.306 0.167 0.101 0.004 0.000 chr8 81453253 81466579
view FADD 203 60 51 41 0 0 0.787 0.233 0.198 0.159 0.000 0.000 chr11 70198296 70212390
view FADS1 135 38 121 67 0 0 0.523 0.147 0.469 0.260 0.000 0.000 chr11 61794627 61822003
view FADS2 139 36 95 55 0 0 0.539 0.140 0.368 0.213 0.000 0.000 chr11 61823300 61872354
view FADS3 208 69 48 34 0 0 0.806 0.267 0.186 0.132 0.000 0.000 chr11 61868526 61896545
view FADS6 219 75 34 25 0 0 0.849 0.291 0.132 0.097 0.000 0.000 chr17 74872302 74898633
view FAF1 94 14 136 79 0 0 0.364 0.054 0.527 0.306 0.000 0.000 chr1 50432028 50965267
view FAF2 185 65 53 27 0 0 0.717 0.252 0.205 0.105 0.000 0.000 chr5 176443385 176515074
view FAHD1 223 83 31 19 0 0 0.864 0.322 0.120 0.074 0.000 0.000 chr16 1822206 1833910
view FAHD2A 176 62 73 35 0 0 0.682 0.240 0.283 0.136 0.000 0.000 chr2 95397708 95421616
view FAHD2B 206 69 49 33 0 0 0.798 0.267 0.190 0.128 0.000 0.000 chr2 97078583 97099882
view FAH 213 76 40 26 0 0 0.826 0.295 0.155 0.101 0.000 0.000 chr15 80147999 80191349
view FAIM2 217 78 30 21 0 0 0.841 0.302 0.116 0.081 0.000 0.000 chr12 49861896 49908900
view FAIM 183 47 61 47 0 0 0.709 0.182 0.236 0.182 0.000 0.000 chr3 138603771 138638376
view FAM104A 199 62 50 34 0 0 0.771 0.240 0.194 0.132 0.000 0.000 chr17 73202365 73237394
view FAM104B 85 25 170 77 0 0 0.329 0.097 0.659 0.298 0.000 0.000 chrX 55138102 55166185
view FAM107A 218 80 35 21 0 0 0.845 0.310 0.136 0.081 0.000 0.000 chr3 58559117 58582391
view FAM107B 135 39 57 38 0 0 0.523 0.151 0.221 0.147 0.000 0.000 chr10 14513557 14779897
view FAM110A 217 81 38 23 0 0 0.841 0.314 0.147 0.089 0.000 0.000 chr20 828715 851277
view FAM110B 149 45 62 38 0 0 0.578 0.174 0.240 0.147 0.000 0.000 chr8 57989523 58153784
view FAM110C 220 81 33 23 2 0 0.853 0.314 0.128 0.089 0.008 0.000 chr2 33814 51505
view FAM110D 205 67 51 36 1 1 0.795 0.260 0.198 0.140 0.004 0.004 chr1 26154079 26168962
view FAM111A 220 80 34 21 0 0 0.853 0.310 0.132 0.081 0.000 0.000 chr11 59137856 59160039
view FAM111B 206 80 48 22 0 0 0.798 0.310 0.186 0.085 0.000 0.000 chr11 59102237 59132412
view FAM114A1 185 57 58 37 0 0 0.717 0.221 0.225 0.143 0.000 0.000 chr4 38862806 38950739
view FAM114A2 171 49 69 46 0 0 0.663 0.190 0.267 0.178 0.000 0.000 chr5 153985148 154043910
view FAM117A 167 43 74 47 0 0 0.647 0.167 0.287 0.182 0.000 0.000 chr17 49705332 49769131
view FAM117B 158 45 75 47 0 0 0.612 0.174 0.291 0.182 0.000 0.000 chr2 202629969 202774757