Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view FAM177B 199 60 55 41 0 0 0.771 0.233 0.213 0.159 0.000 0.000 chr1 222732202 222756004
view FAM178B 124 28 92 49 0 0 0.481 0.109 0.357 0.190 0.000 0.000 chr2 96870885 96991580
view FAM180A 217 82 38 20 0 0 0.841 0.318 0.147 0.078 0.000 0.000 chr7 135724592 135753813
view FAM180B 206 73 49 29 0 0 0.798 0.283 0.190 0.112 0.000 0.000 chr11 47581678 47594194
view FAM181A 219 81 39 24 0 0 0.849 0.314 0.151 0.093 0.000 0.000 chr14 93922344 93934608
view FAM181B 212 79 42 24 0 0 0.822 0.306 0.163 0.093 0.000 0.000 chr11 82724940 82738864
view FAM184A 142 37 85 47 0 0 0.550 0.143 0.329 0.182 0.000 0.000 chr6 118954763 119083664
view FAM184B 118 16 97 62 0 0 0.457 0.062 0.376 0.240 0.000 0.000 chr4 17624306 17786621
view FAM185A 189 62 51 30 0 0 0.733 0.240 0.198 0.116 0.000 0.000 chr7 102743999 102814225
view FAM186A 165 55 83 47 0 0 0.640 0.213 0.322 0.182 0.000 0.000 chr12 50322309 50401609
view FAM186B 132 25 116 70 0 0 0.512 0.097 0.450 0.271 0.000 0.000 chr12 49582505 49610639
view FAM187A 213 72 41 29 0 0 0.826 0.279 0.159 0.112 0.000 0.000 chr17 44898433 44910390
view FAM187B 224 84 31 18 1 1 0.868 0.326 0.120 0.070 0.004 0.004 chr19 35219800 35233739
view FAM193A 164 45 74 48 0 0 0.636 0.174 0.287 0.186 0.000 0.000 chr4 2531647 2737573
view FAM193B 184 63 59 34 0 0 0.713 0.244 0.229 0.132 0.000 0.000 chr5 177514789 177559563
view FAM199X 78 21 170 78 0 0 0.302 0.081 0.659 0.302 0.000 0.000 chrX 104161453 104200902
view FAM200A 188 64 66 38 0 0 0.729 0.248 0.256 0.147 0.000 0.000 chr7 99541300 99557114
view FAM200B 216 80 40 24 0 0 0.837 0.310 0.155 0.093 0.000 0.000 chr4 15676827 15695447
view FAM200C 219 82 36 20 1 1 0.849 0.318 0.140 0.078 0.004 0.004 chr5 160388148 160405054
view FAM204A 196 66 52 32 0 0 0.760 0.256 0.202 0.124 0.000 0.000 chr10 118292925 118347324
view FAM209A 210 73 44 29 1 1 0.814 0.283 0.171 0.112 0.004 0.004 chr20 56519744 56531152
view FAM209B 207 70 45 30 2 1 0.802 0.271 0.174 0.116 0.008 0.004 chr20 56528246 56541520
view FAM20A 189 66 50 27 0 0 0.733 0.256 0.194 0.105 0.000 0.000 chr17 68530116 68606367
view FAM20B 203 72 45 25 0 0 0.787 0.279 0.174 0.097 0.000 0.000 chr1 179020894 179081567
view FAM20C 0 0 0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 chr7 187571 265772
view FAM210A 162 44 76 46 0 0 0.628 0.171 0.295 0.178 0.000 0.000 chr18 13658347 13731558
view FAM210B 195 69 59 33 0 0 0.756 0.267 0.229 0.128 0.000 0.000 chr20 56353974 56373663
view FAM216A 154 40 100 61 0 0 0.597 0.155 0.388 0.236 0.000 0.000 chr12 110463845 110495385
view FAM216B 225 87 30 15 0 0 0.872 0.337 0.116 0.058 0.000 0.000 chr13 42776584 42796549
view FAM217A 216 73 39 30 0 0 0.837 0.283 0.151 0.116 0.000 0.000 chr6 4063367 4084137
view FAM217B 187 60 64 41 1 0 0.725 0.233 0.248 0.159 0.004 0.000 chr20 59935389 59953680
view FAM219A 197 70 46 24 0 0 0.764 0.271 0.178 0.093 0.000 0.000 chr9 34393184 34463570
view FAM219B 215 85 39 18 0 0 0.833 0.329 0.151 0.070 0.000 0.000 chr15 74894992 74911851
view FAM220A 209 69 45 32 0 0 0.810 0.267 0.174 0.124 0.000 0.000 chr7 6324411 6353967
view FAM221A 204 70 46 28 0 0 0.791 0.271 0.178 0.109 0.000 0.000 chr7 23675199 23707650
view FAM221B 210 79 46 25 0 0 0.814 0.306 0.178 0.097 0.000 0.000 chr9 35811391 35833732
view FAM222A 182 61 53 28 0 0 0.705 0.236 0.205 0.109 0.000 0.000 chr12 109708825 109775495
view FAM222B 137 40 85 45 0 0 0.531 0.155 0.329 0.174 0.000 0.000 chr17 28750980 28847790
view FAM227A 163 59 78 43 0 0 0.632 0.229 0.302 0.167 0.000 0.000 chr22 38573118 38661392
view FAM227B 146 45 81 43 0 0 0.566 0.174 0.314 0.167 0.000 0.000 chr15 49321970 49625818
view FAM228A 172 53 75 42 0 0 0.667 0.205 0.291 0.163 0.000 0.000 chr2 24170053 24196698
view FAM228B 144 42 98 53 0 0 0.558 0.163 0.380 0.205 0.000 0.000 chr2 24118469 24174638
view FAM229A 147 34 108 68 0 0 0.570 0.132 0.419 0.264 0.000 0.000 chr1 32356270 32367485
view FAM229B 208 75 43 26 0 0 0.806 0.291 0.167 0.101 0.000 0.000 chr6 112082591 112107790
view FAM234A 203 66 40 28 0 0 0.787 0.256 0.155 0.109 0.000 0.000 chr16 229821 271096
view FAM234B 211 79 37 19 1 1 0.818 0.306 0.143 0.074 0.004 0.004 chr12 13039381 13088449
view FAM236A 78 27 120 53 6 0 0.302 0.105 0.465 0.205 0.023 0.000 chrX 72933206 72943958
view FAM236B 67 4 102 49 17 0 0.260 0.016 0.395 0.190 0.066 0.000 chrX 72776865 72787660
view FAM236C 71 26 147 71 3 1 0.275 0.101 0.570 0.275 0.012 0.004 chrX 72907615 72918401
view FAM236D 73 20 149 72 10 0 0.283 0.078 0.578 0.279 0.039 0.000 chrX 72802425 72813210