Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view FAM237A 231 85 24 18 2 1 0.895 0.329 0.093 0.070 0.008 0.004 chr2 206637487 206654365
view FAM237B 203 69 52 33 1 1 0.787 0.267 0.202 0.128 0.004 0.004 chr7 90311807 90326304
view FAM240A 218 78 35 22 0 0 0.845 0.302 0.136 0.085 0.000 0.000 chr3 46607525 46631543
view FAM240B 232 90 22 11 0 0 0.899 0.349 0.085 0.043 0.000 0.000 chr9 38689266 38725133
view FAM240C 18 2 114 40 1 0 0.070 0.008 0.442 0.155 0.004 0.000 chr2 241888988 241905464
view FAM241A 193 71 51 27 0 0 0.748 0.275 0.198 0.105 0.000 0.000 chr4 112140454 112200256
view FAM241B 230 82 26 22 1 0 0.891 0.318 0.101 0.085 0.004 0.000 chr10 69625247 69638596
view FAM246A 207 66 44 32 1 1 0.802 0.256 0.171 0.124 0.004 0.004 chr22 21355601 21366299
view FAM246B 16 5 94 32 4 0 0.062 0.019 0.364 0.124 0.016 0.000 chr22 18628984 18639682
view FAM24A 212 79 45 25 0 0 0.822 0.306 0.174 0.097 0.000 0.000 chr10 122905610 122918111
view FAM24B 181 56 61 35 0 0 0.702 0.217 0.236 0.136 0.000 0.000 chr10 122844078 122884581
view FAM25A 221 76 36 29 1 0 0.857 0.295 0.140 0.112 0.004 0.000 chr10 87015294 87029730
view FAM25C 218 83 33 20 5 0 0.845 0.322 0.128 0.078 0.019 0.000 chr10 47990322 48004791
view FAM25G 212 80 35 23 10 1 0.822 0.310 0.136 0.089 0.039 0.004 chr10 47482219 47496700
view FAM32A 205 71 52 33 0 0 0.795 0.275 0.202 0.128 0.000 0.000 chr19 16180410 16197046
view FAM3A 107 31 145 68 0 0 0.415 0.120 0.562 0.264 0.000 0.000 chrX 154501171 154521232
view FAM3B 156 37 90 62 0 0 0.605 0.143 0.349 0.240 0.000 0.000 chr21 41311801 41362727
view FAM3C 134 30 104 61 0 0 0.519 0.116 0.403 0.236 0.000 0.000 chr7 121343878 121401308
view FAM3D 198 63 51 36 0 0 0.767 0.244 0.198 0.140 0.000 0.000 chr3 58628946 58671774
view FAM43A 220 77 34 24 0 0 0.853 0.298 0.132 0.093 0.000 0.000 chr3 194680883 194694037
view FAM43B 231 84 24 18 1 1 0.895 0.326 0.093 0.070 0.004 0.004 chr1 20547573 20560020
view FAM47A 99 34 156 69 1 0 0.384 0.132 0.605 0.267 0.004 0.000 chrX 34124752 34137314
view FAM47B 104 34 154 71 0 0 0.403 0.132 0.597 0.275 0.000 0.000 chrX 34937796 34949915
view FAM47C 89 23 165 79 0 0 0.345 0.089 0.640 0.306 0.000 0.000 chrX 37003366 37016664
view FAM47E 195 74 58 29 0 0 0.756 0.287 0.225 0.112 0.000 0.000 chr4 76246721 76288783
view FAM50A 74 10 175 88 0 0 0.287 0.039 0.678 0.341 0.000 0.000 chrX 154439141 154455654
view FAM50B 239 94 16 9 1 1 0.926 0.364 0.062 0.035 0.004 0.004 chr6 3844373 3856317
view FAM53A 174 42 64 46 0 0 0.674 0.163 0.248 0.178 0.000 0.000 chr4 1634887 1689313
view FAM53B 164 58 68 32 0 0 0.636 0.225 0.264 0.124 0.000 0.000 chr10 124614292 124749378
view FAM53C 215 78 42 26 0 0 0.833 0.302 0.163 0.101 0.000 0.000 chr5 138333266 138354729
view FAM72A 172 50 78 51 1 0 0.667 0.194 0.302 0.198 0.004 0.000 chr1 206181179 206207839
view FAM72B 189 54 63 46 0 0 0.733 0.209 0.244 0.178 0.000 0.000 chr1 121162646 121189340
view FAM72C 124 41 126 59 1 0 0.481 0.159 0.488 0.229 0.004 0.000 chr1 143950287 143976986
view FAM72D 160 54 78 39 4 0 0.620 0.209 0.302 0.151 0.016 0.000 chr1 145090974 145117696
view FAM76A 131 34 104 55 0 0 0.508 0.132 0.403 0.213 0.000 0.000 chr1 27720961 27768116
view FAM76B 207 66 43 33 0 0 0.802 0.256 0.167 0.128 0.000 0.000 chr11 95763953 95794782
view FAM78A 208 68 43 31 0 0 0.806 0.264 0.167 0.120 0.000 0.000 chr9 131253078 131281510
view FAM78B 158 46 77 46 0 0 0.612 0.178 0.298 0.178 0.000 0.000 chr1 166064299 166172001
view FAM81A 186 62 54 31 0 0 0.721 0.240 0.209 0.120 0.000 0.000 chr15 59433186 59528555
view FAM81B 173 50 59 39 0 0 0.671 0.194 0.229 0.151 0.000 0.000 chr5 95386366 95455441
view FAM83A 184 55 61 41 0 0 0.713 0.213 0.236 0.159 0.000 0.000 chr8 123177665 123215078
view FAM83B 135 30 105 62 0 0 0.523 0.116 0.407 0.240 0.000 0.000 chr6 54841771 54950099
view FAM83C 198 65 51 32 1 1 0.767 0.252 0.198 0.124 0.004 0.004 chr20 35280731 35297425
view FAM83D 170 59 79 41 0 0 0.659 0.229 0.306 0.159 0.000 0.000 chr20 38921417 38958106
view FAM83E 206 64 48 37 0 0 0.798 0.248 0.186 0.143 0.000 0.000 chr19 48594961 48620076
view FAM83F 116 13 114 73 0 0 0.450 0.050 0.442 0.283 0.000 0.000 chr22 39989954 40048534
view FAM83G 188 61 47 26 0 0 0.729 0.236 0.182 0.101 0.000 0.000 chr17 18963789 19009764
view FAM83H 198 60 50 36 0 0 0.767 0.233 0.194 0.140 0.000 0.000 chr8 143718933 143738779
view FAM86B1 87 42 47 32 117 26 0.337 0.163 0.182 0.124 0.453 0.101 chr8 12177106 12199082
view FAM86B2 25 5 104 35 1 0 0.097 0.019 0.403 0.136 0.004 0.000 chr8 12419421 12441400