Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view AKAP4 79 27 175 74 0 0 0.306 0.105 0.678 0.287 0.000 0.000 chrX 50185777 50206007
view AKAP5 212 78 44 25 1 1 0.822 0.302 0.171 0.097 0.004 0.004 chr14 64460499 64479503
view AKAP6 76 12 85 47 0 0 0.295 0.047 0.329 0.182 0.000 0.000 chr14 32324298 32842684
view AKAP7 151 51 73 44 0 0 0.585 0.198 0.283 0.171 0.000 0.000 chr6 131130467 131288532
view AKAP8L 126 27 105 64 0 0 0.488 0.105 0.407 0.248 0.000 0.000 chr19 15375050 15423988
view AKAP8 142 28 97 64 0 0 0.550 0.109 0.376 0.248 0.000 0.000 chr19 15348385 15384787
view AKAP9 152 55 83 40 0 0 0.589 0.213 0.322 0.155 0.000 0.000 chr7 91935862 92115673
view AKIP1 209 74 48 30 0 0 0.810 0.287 0.186 0.116 0.000 0.000 chr11 8906189 8925079
view AKIRIN1 212 76 42 27 0 0 0.822 0.295 0.163 0.105 0.000 0.000 chr1 38986276 39011059
view AKIRIN2 202 69 47 30 0 0 0.783 0.267 0.182 0.116 0.000 0.000 chr6 87669860 87707233
view AKNAD1 198 64 47 31 0 0 0.767 0.248 0.182 0.120 0.000 0.000 chr1 108810901 108862094
view AKNA 193 59 49 37 0 0 0.748 0.229 0.190 0.143 0.000 0.000 chr9 114329156 114392982
view AKR1A1 175 52 74 46 0 0 0.678 0.202 0.287 0.178 0.000 0.000 chr1 45545826 45575049
view AKR1B10 223 83 32 19 0 0 0.864 0.322 0.124 0.074 0.000 0.000 chr7 134522567 134546412
view AKR1B15 201 69 43 24 0 0 0.779 0.267 0.167 0.093 0.000 0.000 chr7 134544110 134584869
view AKR1B1 222 78 31 23 0 0 0.860 0.302 0.120 0.089 0.000 0.000 chr7 134437356 134464100
view AKR1C1 212 74 36 22 0 0 0.822 0.287 0.140 0.085 0.000 0.000 chr10 4958415 4988283
view AKR1C2 205 68 50 34 1 1 0.795 0.264 0.194 0.132 0.004 0.004 chr10 4982775 5008857
view AKR1C3 218 81 33 18 1 0 0.845 0.314 0.128 0.070 0.004 0.000 chr10 5089414 5112686
view AKR1C4 216 82 35 18 0 0 0.837 0.318 0.136 0.070 0.000 0.000 chr10 5191837 5223949
view AKR1C8 203 65 43 28 0 0 0.787 0.252 0.167 0.109 0.000 0.000 chr10 5148920 5190150
view AKR1D1 212 75 40 28 0 0 0.822 0.291 0.155 0.109 0.000 0.000 chr7 138071459 138123305
view AKR1E2 178 50 71 47 0 0 0.690 0.194 0.275 0.182 0.000 0.000 chr10 4821207 4853062
view AKR7A2 229 84 25 18 0 0 0.888 0.326 0.097 0.070 0.000 0.000 chr1 19298965 19317144
view AKR7A3 215 76 39 25 0 0 0.833 0.295 0.151 0.097 0.000 0.000 chr1 19277573 19293770
view AKT1S1 209 74 46 29 1 0 0.810 0.287 0.178 0.112 0.004 0.000 chr19 49864039 49882355
view AKT1 192 56 51 36 0 0 0.744 0.217 0.198 0.140 0.000 0.000 chr14 104764349 104800748
view AKT2 179 60 66 36 0 0 0.694 0.233 0.256 0.140 0.000 0.000 chr19 40225317 40290345
view AKT3 150 40 74 44 0 0 0.581 0.155 0.287 0.171 0.000 0.000 chr1 243494724 243855243
view AKTIP 192 59 57 38 0 0 0.744 0.229 0.221 0.147 0.000 0.000 chr16 53486040 53508209
view ALAD 222 77 35 27 0 0 0.860 0.298 0.136 0.105 0.000 0.000 chr9 113381312 113406284
view ALAS1 176 52 74 46 0 0 0.682 0.202 0.287 0.178 0.000 0.000 chr3 52193160 52219327
view ALAS2 77 17 177 84 0 0 0.298 0.066 0.686 0.326 0.000 0.000 chrX 55004055 55035977
view ALB 195 69 60 34 0 0 0.756 0.267 0.233 0.132 0.000 0.000 chr4 73399287 73426482
view ALCAM 188 64 52 34 0 0 0.729 0.248 0.202 0.132 0.000 0.000 chr3 105361909 105581900
view ALDH16A1 170 39 71 49 0 0 0.659 0.151 0.275 0.190 0.000 0.000 chr19 49448225 49476050
view ALDH18A1 185 61 59 39 0 0 0.717 0.236 0.229 0.151 0.000 0.000 chr10 95600941 95661711
view ALDH1A1 152 42 82 50 0 0 0.589 0.163 0.318 0.194 0.000 0.000 chr9 72895671 72958053
view ALDH1A2 162 52 73 42 0 0 0.628 0.202 0.283 0.163 0.000 0.000 chr15 57948429 58070711
view ALDH1A3 206 74 42 23 0 0 0.798 0.287 0.163 0.089 0.000 0.000 chr15 100874831 100921626
view ALDH1B1 241 92 16 12 0 0 0.934 0.357 0.062 0.047 0.000 0.000 chr9 38387702 38403661
view ALDH1L1 168 51 56 34 0 0 0.651 0.198 0.217 0.132 0.000 0.000 chr3 126098570 126185586
view ALDH1L2 192 66 51 30 0 0 0.744 0.256 0.198 0.116 0.000 0.000 chr12 105014790 105089458
view ALDH2 170 60 70 34 0 0 0.659 0.233 0.271 0.132 0.000 0.000 chr12 111761933 111822532
view ALDH3A1 211 72 41 28 2 1 0.818 0.279 0.159 0.109 0.008 0.004 chr17 19732989 19753298
view ALDH3A2 182 63 67 36 0 0 0.705 0.244 0.260 0.140 0.000 0.000 chr17 19643751 19682596
view ALDH3B1 186 59 63 40 0 0 0.721 0.229 0.244 0.155 0.000 0.000 chr11 68005327 68034276
view ALDH3B2 194 65 56 35 0 0 0.752 0.252 0.217 0.136 0.000 0.000 chr11 67657155 67679623
view ALDH4A1 202 60 44 35 0 0 0.783 0.233 0.171 0.136 0.000 0.000 chr1 18866430 18907555
view ALDH5A1 183 54 54 34 0 0 0.709 0.209 0.209 0.132 0.000 0.000 chr6 24489969 24542207