Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view GPC6 38 2 92 42 0 0 0.147 0.008 0.357 0.163 0.000 0.000 chr13 93221807 94413020
view GPCPD1 192 70 55 27 0 0 0.744 0.271 0.213 0.105 0.000 0.000 chr20 5539439 5616006
view GPD1L 179 61 62 32 0 0 0.694 0.236 0.240 0.124 0.000 0.000 chr3 32101620 32173709
view GPD1 202 69 49 29 0 0 0.783 0.267 0.190 0.112 0.000 0.000 chr12 50099008 50116313
view GPD2 126 43 100 45 0 0 0.488 0.167 0.388 0.174 0.000 0.000 chr2 156431379 156591403
view GPER1 222 79 32 24 2 0 0.860 0.306 0.124 0.093 0.008 0.000 chr7 1083113 1098810
view GPHA2 213 82 42 22 0 0 0.826 0.318 0.163 0.085 0.000 0.000 chr11 64929471 64940893
view GPHB5 210 73 46 30 1 1 0.814 0.283 0.178 0.116 0.004 0.004 chr14 63307835 63323935
view GPHN 116 38 103 56 0 0 0.450 0.147 0.399 0.217 0.000 0.000 chr14 66503147 67186803
view GPIHBP1 52 8 105 36 0 0 0.202 0.031 0.407 0.140 0.000 0.000 chr8 143208218 143222170
view GPI 156 39 81 49 0 0 0.605 0.151 0.314 0.190 0.000 0.000 chr19 34360196 34407413
view GPKOW 75 18 176 81 0 0 0.291 0.070 0.682 0.314 0.000 0.000 chrX 49108407 49128735
view GPLD1 178 60 65 39 0 0 0.690 0.233 0.252 0.151 0.000 0.000 chr6 24420832 24494578
view GPM6A 134 35 59 37 0 0 0.519 0.136 0.229 0.143 0.000 0.000 chr4 175627937 175817264
view GPM6B 100 39 155 65 0 0 0.388 0.151 0.601 0.252 0.000 0.000 chrX 13765939 13822093
view GPN1 182 66 70 36 0 0 0.705 0.256 0.271 0.140 0.000 0.000 chr2 27624050 27656511
view GPN2 128 20 117 75 0 0 0.496 0.078 0.453 0.291 0.000 0.000 chr1 26871132 26895283
view GPN3 161 43 85 52 0 0 0.624 0.167 0.329 0.202 0.000 0.000 chr12 110447486 110473257
view GPNMB 189 61 58 36 0 0 0.733 0.236 0.225 0.140 0.000 0.000 chr7 23241775 23280108
view GPR101 89 24 164 78 0 0 0.345 0.093 0.636 0.302 0.000 0.000 chrX 137018929 137038995
view GPR107 152 42 79 49 0 0 0.589 0.163 0.306 0.190 0.000 0.000 chr9 130048906 130145164
view GPR108 216 71 35 28 0 0 0.837 0.275 0.136 0.109 0.000 0.000 chr19 6724914 6742580
view GPR119 86 24 169 79 0 0 0.333 0.093 0.655 0.306 0.000 0.000 chrX 130374449 130390674
view GPR12 190 62 66 41 0 0 0.736 0.240 0.256 0.159 0.000 0.000 chr13 26750200 26765786
view GPR132 202 73 52 30 0 0 0.783 0.283 0.202 0.116 0.000 0.000 chr14 105044395 105070430
view GPR135 183 53 73 51 1 1 0.709 0.205 0.283 0.198 0.004 0.004 chr14 59455759 59470380
view GPR137B 192 66 48 31 0 0 0.744 0.256 0.186 0.120 0.000 0.000 chr1 236137539 236213907
view GPR137C 172 62 64 30 0 0 0.667 0.240 0.248 0.116 0.000 0.000 chr14 52547836 52642713
view GPR137 199 65 57 39 0 0 0.771 0.252 0.221 0.151 0.000 0.000 chr11 64280848 64294494
view GPR139 181 59 60 30 0 0 0.702 0.229 0.233 0.116 0.000 0.000 chr16 20023239 20078890
view GPR141 199 73 48 27 0 0 0.771 0.283 0.186 0.105 0.000 0.000 chr7 37678766 37748835
view GPR142 225 83 31 21 1 0 0.872 0.322 0.120 0.081 0.004 0.000 chr17 74362506 74377600
view GPR143 73 15 172 80 0 0 0.283 0.058 0.667 0.310 0.000 0.000 chrX 9720346 9770847
view GPR146 216 77 38 24 0 0 0.837 0.298 0.147 0.093 0.000 0.000 chr7 1039546 1064261
view GPR148 180 57 74 46 1 0 0.698 0.221 0.287 0.178 0.004 0.000 chr2 130724070 130735336
view GPR149 167 60 61 36 0 0 0.647 0.233 0.236 0.140 0.000 0.000 chr3 154329943 154435190
view GPR150 223 82 32 20 0 0 0.864 0.318 0.124 0.078 0.000 0.000 chr5 95615087 95627142
view GPR151 209 78 48 27 0 0 0.810 0.302 0.186 0.105 0.000 0.000 chr5 146508144 146521190
view GPR152 179 58 75 44 0 0 0.694 0.225 0.291 0.171 0.000 0.000 chr11 67446301 67457729
view GPR153 186 57 65 43 0 0 0.721 0.221 0.252 0.167 0.000 0.000 chr1 6242353 6266098
view GPR155 149 34 82 54 0 0 0.578 0.132 0.318 0.209 0.000 0.000 chr2 174426571 174492029
view GPR156 160 39 92 62 0 0 0.620 0.151 0.357 0.240 0.000 0.000 chr3 120160478 120290222
view GPR157 201 67 46 29 0 0 0.779 0.260 0.178 0.112 0.000 0.000 chr1 9095305 9134102
view GPR158 80 20 97 47 0 0 0.310 0.078 0.376 0.182 0.000 0.000 chr10 25170001 25607229
view GPR15LG 228 84 28 19 0 0 0.884 0.326 0.109 0.074 0.000 0.000 chr10 84168801 84190294
view GPR15 234 90 22 14 1 0 0.907 0.349 0.085 0.054 0.004 0.000 chr3 98526978 98539681
view GPR160 177 55 67 41 0 0 0.686 0.213 0.260 0.159 0.000 0.000 chr3 170032995 170090392
view GPR161 169 52 64 40 0 0 0.655 0.202 0.248 0.155 0.000 0.000 chr1 168074542 168141930
view GPR162 228 82 27 20 1 1 0.884 0.318 0.105 0.078 0.004 0.004 chr12 6816821 6832421
view GPR171 224 90 32 14 1 0 0.868 0.349 0.124 0.054 0.004 0.000 chr3 151192832 151208216