Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view HSD17B14 196 59 49 35 0 0 0.760 0.229 0.190 0.136 0.000 0.000 chr19 48808018 48841491
view HSD17B1 210 72 44 29 0 0 0.814 0.279 0.171 0.112 0.000 0.000 chr17 42547923 42560214
view HSD17B2 182 66 56 28 0 0 0.705 0.256 0.217 0.109 0.000 0.000 chr16 82030253 82103534
view HSD17B3 186 58 51 34 0 0 0.721 0.225 0.198 0.132 0.000 0.000 chr9 96230306 96307176
view HSD17B4 189 67 54 34 0 0 0.733 0.260 0.209 0.132 0.000 0.000 chr5 119447497 119547332
view HSD17B6 179 54 63 41 0 0 0.694 0.209 0.244 0.159 0.000 0.000 chr12 56758324 56792790
view HSD17B7 209 75 43 26 0 0 0.810 0.291 0.167 0.101 0.000 0.000 chr1 162785702 162817823
view HSD17B8 201 64 52 36 0 0 0.779 0.248 0.202 0.140 0.000 0.000 chr6 33199655 33211831
view HSD3B1 204 75 49 28 1 0 0.791 0.291 0.190 0.109 0.004 0.000 chr1 119502210 119520054
view HSD3B2 220 86 35 16 1 1 0.853 0.333 0.136 0.062 0.004 0.004 chr1 119410150 119428034
view HSD3B7 156 33 94 65 0 0 0.605 0.128 0.364 0.252 0.000 0.000 chr16 30980207 30994147
view HSDL1 223 85 27 13 0 0 0.864 0.329 0.105 0.050 0.000 0.000 chr16 84117141 84150177
view HSDL2 182 66 60 30 0 0 0.705 0.256 0.233 0.116 0.000 0.000 chr9 112375108 112477405
view HSF1 164 41 75 48 0 0 0.636 0.159 0.291 0.186 0.000 0.000 chr8 144286604 144319720
view HSF2BP 0 0 17 3 0 0 0.000 0.000 0.066 0.012 0.000 0.000 chr21 43524186 43664488
view HSF2 192 69 59 32 1 1 0.744 0.267 0.229 0.124 0.004 0.004 chr6 122394652 122438119
view HSF4 132 21 122 80 0 0 0.512 0.081 0.473 0.310 0.000 0.000 chr16 67159745 67174941
view HSF5 165 52 81 49 0 0 0.640 0.202 0.314 0.190 0.000 0.000 chr17 58415167 58493408
view HSFX1 82 22 147 65 9 1 0.318 0.085 0.570 0.252 0.035 0.004 chrX 149769068 149781867
view HSFX2 100 32 145 63 4 1 0.388 0.124 0.562 0.244 0.016 0.004 chrX 149587512 149600314
view HSFX3 101 28 153 74 1 0 0.391 0.109 0.593 0.287 0.004 0.000 chrX 149543210 149554924
view HSFX4 91 21 157 74 0 0 0.353 0.081 0.609 0.287 0.000 0.000 chrX 149924573 149936287
view HSFY1 1 0 52 17 0 0 0.004 0.000 0.202 0.066 0.000 0.000 chrY 18541720 18553592
view HSFY2 38 14 89 40 0 0 0.147 0.054 0.345 0.155 0.000 0.000 chrY 18766814 18778735
view HSH2D 196 66 56 35 0 0 0.760 0.256 0.217 0.136 0.000 0.000 chr19 16138685 16163575
view HSP90AA1 198 69 55 32 0 0 0.767 0.267 0.213 0.124 0.000 0.000 chr14 102075742 102092044
view HSP90AB1 215 70 40 32 1 1 0.833 0.271 0.155 0.124 0.004 0.004 chr6 44242101 44258883
view HSP90B1 228 82 28 21 1 1 0.884 0.318 0.109 0.081 0.004 0.004 chr12 103925410 103952926
view HSPA12A 159 48 71 41 0 0 0.616 0.186 0.275 0.159 0.000 0.000 chr10 116666192 116747566
view HSPA12B 211 69 40 30 1 1 0.818 0.267 0.155 0.116 0.004 0.004 chr20 3727685 3758111
view HSPA13 203 66 53 38 0 0 0.787 0.256 0.205 0.147 0.000 0.000 chr21 14366115 14388146
view HSPA14 186 64 64 37 0 0 0.721 0.248 0.248 0.143 0.000 0.000 chr10 14833306 14876741
view HSPA1A 209 66 45 35 1 1 0.810 0.256 0.174 0.136 0.004 0.004 chr6 31810543 31822942
view HSPA1B 210 66 47 38 0 0 0.814 0.256 0.182 0.147 0.000 0.000 chr6 31822738 31835254
view HSPA1L 214 71 38 28 0 0 0.829 0.275 0.147 0.109 0.000 0.000 chr6 31804619 31820283
view HSPA2 187 62 69 41 0 0 0.725 0.240 0.267 0.159 0.000 0.000 chr14 64535741 64548237
view HSPA4L 169 65 76 36 0 0 0.655 0.252 0.295 0.140 0.000 0.000 chr4 127777322 127845733
view HSPA4 181 58 60 38 0 0 0.702 0.225 0.233 0.147 0.000 0.000 chr5 133047013 133111449
view HSPA5 201 73 49 27 2 1 0.779 0.283 0.190 0.105 0.008 0.004 chr9 125229853 125246343
view HSPA6 227 90 24 13 6 1 0.880 0.349 0.093 0.050 0.023 0.004 chr1 161519540 161531894
view HSPA8 211 75 41 26 2 0 0.818 0.291 0.159 0.101 0.008 0.000 chr11 123052489 123067136
view HSPA9 150 34 98 64 0 0 0.581 0.132 0.380 0.248 0.000 0.000 chr5 138548756 138580401
view HSPB1 209 71 42 29 2 0 0.810 0.275 0.163 0.112 0.008 0.000 chr7 76297673 76309292
view HSPB2 196 67 60 38 2 0 0.760 0.260 0.233 0.147 0.008 0.000 chr11 111907734 111919093
view HSPB3 230 85 28 20 0 0 0.891 0.329 0.109 0.078 0.000 0.000 chr5 54450699 54461377
view HSPB6 206 67 49 35 1 1 0.798 0.260 0.190 0.136 0.004 0.004 chr19 35749566 35762029
view HSPB7 195 59 61 44 1 1 0.756 0.229 0.236 0.171 0.004 0.004 chr1 16009029 16023043
view HSPB8 208 77 44 25 0 0 0.806 0.298 0.171 0.097 0.000 0.000 chr12 119173931 119199746
view HSPB9 166 48 87 54 1 0 0.643 0.186 0.337 0.209 0.004 0.000 chr17 42117804 42128352
view HSPBAP1 174 58 70 38 0 0 0.674 0.225 0.271 0.147 0.000 0.000 chr3 122734999 122798831