Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ILDR2 171 56 71 37 0 0 0.663 0.217 0.275 0.143 0.000 0.000 chr1 166903187 166980540
ILF2 193 61 61 40 1 1 0.748 0.236 0.236 0.155 0.004 0.004 chr1 153656788 153675993
ILF3 172 62 70 32 0 0 0.667 0.240 0.271 0.124 0.000 0.000 chr19 10649346 10697400
ILKAP 209 79 41 22 0 0 0.810 0.306 0.159 0.085 0.000 0.000 chr2 238165402 238208695
ILK 225 83 31 20 1 1 0.872 0.322 0.120 0.078 0.004 0.004 chr11 6598774 6615870
ILRUN 157 46 79 44 0 0 0.609 0.178 0.306 0.171 0.000 0.000 chr6 34582288 34701767
ILVBL 219 72 36 30 1 1 0.849 0.279 0.140 0.116 0.004 0.004 chr19 15109987 15130786
IMMP1L 148 47 95 52 0 0 0.574 0.182 0.368 0.202 0.000 0.000 chr11 31427401 31514622
IMMP2L 42 1 125 64 0 0 0.163 0.004 0.484 0.248 0.000 0.000 chr7 110657644 111567492
IMMT 188 69 58 29 0 0 0.729 0.267 0.225 0.112 0.000 0.000 chr2 86138936 86200462
IMP3 199 69 58 35 0 0 0.771 0.267 0.225 0.136 0.000 0.000 chr15 75634093 75645224
IMP4 200 68 52 32 0 0 0.775 0.264 0.202 0.124 0.000 0.000 chr2 130337897 130352967
IMPA1 189 61 66 43 1 1 0.733 0.236 0.256 0.167 0.004 0.004 chr8 81651914 81691325
IMPA2 181 51 57 40 0 0 0.702 0.198 0.221 0.155 0.000 0.000 chr18 11976507 12035877
IMPACT 200 68 50 30 0 0 0.775 0.264 0.194 0.116 0.000 0.000 chr18 24421670 24458531
IMPDH1 206 72 49 30 0 0 0.798 0.279 0.190 0.116 0.000 0.000 chr7 128387277 128414982
IMPDH2 151 41 96 55 0 0 0.585 0.159 0.372 0.213 0.000 0.000 chr3 49019325 49034398
IMPG1 150 51 67 37 0 0 0.581 0.198 0.260 0.143 0.000 0.000 chr6 75916114 76077662
IMPG2 179 62 61 31 0 0 0.694 0.240 0.236 0.120 0.000 0.000 chr3 101217546 101325575
INAFM1 196 67 55 33 1 0 0.760 0.260 0.213 0.128 0.004 0.000 chr19 47269885 47280723
INAFM2 200 65 57 39 1 1 0.775 0.252 0.221 0.151 0.004 0.004 chr15 40318692 40331715
INAVA 211 73 38 25 0 0 0.818 0.283 0.147 0.097 0.000 0.000 chr1 200889900 200920742
INA 208 78 45 23 1 1 0.806 0.302 0.174 0.089 0.004 0.004 chr10 103272138 103295346
INCA1 198 70 54 30 0 0 0.767 0.271 0.209 0.116 0.000 0.000 chr17 4983130 5002522
INCENP 178 57 70 42 0 0 0.690 0.221 0.271 0.163 0.000 0.000 chr11 62119011 62158169
INF2 189 54 55 39 0 0 0.733 0.209 0.213 0.151 0.000 0.000 chr14 104684618 104727535
ING1 218 79 36 23 0 0 0.845 0.306 0.140 0.089 0.000 0.000 chr13 110708700 110728339
ING2 227 87 29 17 0 0 0.880 0.337 0.112 0.066 0.000 0.000 chr4 183500058 183517429
ING3 166 53 88 50 0 0 0.643 0.205 0.341 0.194 0.000 0.000 chr7 120945777 120982216
ING4 202 71 54 34 0 0 0.783 0.275 0.209 0.132 0.000 0.000 chr12 6645301 6668119
ING5 196 66 53 33 0 0 0.760 0.256 0.205 0.128 0.000 0.000 chr2 241697039 241734478
INHA 216 72 40 31 0 0 0.837 0.279 0.155 0.120 0.000 0.000 chr2 219567310 219580711
INHBA 186 56 66 44 0 0 0.721 0.217 0.256 0.171 0.000 0.000 chr7 41680114 41708090
INHBB 227 80 29 23 0 0 0.880 0.310 0.112 0.089 0.000 0.000 chr2 120341136 120356803
INHBC 197 71 52 28 0 0 0.764 0.275 0.202 0.109 0.000 0.000 chr12 57429784 57457062
INHBE 222 80 35 24 0 0 0.860 0.310 0.136 0.093 0.000 0.000 chr12 57450307 57463025
INIP 185 65 65 36 0 0 0.717 0.252 0.252 0.140 0.000 0.000 chr9 112678926 112723117
INKA1 171 46 82 56 1 0 0.663 0.178 0.318 0.217 0.004 0.000 chr3 49798261 49810030
INKA2 216 76 38 25 0 0 0.837 0.295 0.147 0.097 0.000 0.000 chr1 111717064 111744395
INMT 216 76 39 26 0 0 0.837 0.295 0.151 0.101 0.000 0.000 chr7 30747135 30762602
INO80B 164 44 91 58 0 0 0.636 0.171 0.353 0.225 0.000 0.000 chr2 74450087 74462944
INO80C 194 69 55 32 0 0 0.752 0.267 0.213 0.124 0.000 0.000 chr18 35463333 35502960
INO80D 166 51 78 46 0 0 0.643 0.198 0.302 0.178 0.000 0.000 chr2 205988721 206091174
INO80E 170 55 85 49 1 0 0.659 0.213 0.329 0.190 0.004 0.000 chr16 29991241 30010791
INO80 140 37 98 57 0 0 0.543 0.143 0.380 0.221 0.000 0.000 chr15 40973880 41121280
INPP1 204 74 42 22 0 0 0.791 0.287 0.163 0.085 0.000 0.000 chr2 190338589 190376665
INPP4A 136 39 89 52 0 0 0.527 0.151 0.345 0.202 0.000 0.000 chr2 98439858 98599392
INPP4B 45 2 120 65 0 0 0.174 0.008 0.465 0.252 0.000 0.000 chr4 142018160 142851301
INPP5A 101 13 87 50 0 0 0.391 0.050 0.337 0.194 0.000 0.000 chr10 132532787 132788480
INPP5B 172 52 73 45 0 0 0.667 0.202 0.283 0.174 0.000 0.000 chr1 37855697 37952053