Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
KLK15 220 74 36 29 0 0 0.853 0.287 0.140 0.112 0.000 0.000 chr19 50820289 50838574
KLK1 210 65 45 37 0 0 0.814 0.252 0.174 0.143 0.000 0.000 chr19 50814146 50828787
KLK2 227 79 30 25 0 0 0.880 0.306 0.116 0.097 0.000 0.000 chr19 50868439 50885567
KLK3 230 82 27 22 0 0 0.891 0.318 0.105 0.085 0.000 0.000 chr19 50849915 50865764
KLK4 206 61 45 38 1 0 0.798 0.236 0.174 0.147 0.004 0.000 chr19 50901351 50916395
KLK5 189 56 58 40 0 0 0.733 0.217 0.225 0.155 0.000 0.000 chr19 50938303 50958038
KLK6 157 35 73 47 0 0 0.609 0.136 0.283 0.182 0.000 0.000 chr19 50953631 50974591
KLK7 191 60 55 34 0 0 0.740 0.233 0.213 0.132 0.000 0.000 chr19 50971468 50988917
KLK8 209 80 46 23 1 0 0.810 0.310 0.178 0.089 0.004 0.000 chr19 50991008 51006604
KLK9 218 84 36 19 2 1 0.845 0.326 0.140 0.074 0.008 0.004 chr19 50997508 51014592
KLKB1 215 76 34 21 0 0 0.833 0.295 0.132 0.081 0.000 0.000 chr4 186222507 186263471
KLLN 214 81 43 23 0 0 0.829 0.314 0.167 0.089 0.000 0.000 chr10 87854158 87868533
KLRB1 217 78 37 24 0 0 0.841 0.302 0.143 0.093 0.000 0.000 chr12 9589551 9612916
KLRC1 219 84 38 20 1 1 0.849 0.326 0.147 0.078 0.004 0.004 chr12 10441028 10458377
KLRC2 212 77 40 23 2 2 0.822 0.298 0.155 0.089 0.008 0.008 chr12 10425599 10441010
KLRC3 223 81 29 19 0 0 0.864 0.314 0.112 0.074 0.000 0.000 chr12 10407315 10425595
KLRC4 222 81 35 24 0 0 0.860 0.314 0.136 0.093 0.000 0.000 chr12 10402384 10414757
KLRD1 213 77 42 26 0 0 0.826 0.298 0.163 0.101 0.000 0.000 chr12 10302870 10334608
KLRF1 193 52 55 43 0 0 0.748 0.202 0.213 0.167 0.000 0.000 chr12 9822481 9850005
KLRF2 219 76 37 28 1 0 0.849 0.295 0.143 0.109 0.004 0.000 chr12 9876489 9900833
KLRG1 181 64 72 38 0 0 0.702 0.248 0.279 0.147 0.000 0.000 chr12 8984546 9015751
KLRG2 200 70 46 28 0 0 0.775 0.271 0.178 0.109 0.000 0.000 chr7 139447690 139488673
KLRK1 218 77 37 28 1 0 0.845 0.298 0.143 0.109 0.004 0.000 chr12 10367353 10395041
KL 197 74 50 24 0 0 0.764 0.287 0.194 0.093 0.000 0.000 chr13 33011423 33071143
KMO 210 75 34 21 0 0 0.814 0.291 0.132 0.081 0.000 0.000 chr1 241527378 241600642
KMT2A 99 26 132 66 0 0 0.384 0.101 0.512 0.256 0.000 0.000 chr11 118431492 118531832
KMT2B 197 59 50 38 0 0 0.764 0.229 0.194 0.147 0.000 0.000 chr19 35713003 35743878
KMT2C 85 16 109 61 0 0 0.329 0.062 0.422 0.236 0.000 0.000 chr7 152129925 152441003
KMT2D 150 48 92 46 0 0 0.581 0.186 0.357 0.178 0.000 0.000 chr12 49013978 49065794
KMT2E 151 37 80 49 0 0 0.585 0.143 0.310 0.190 0.000 0.000 chr7 105009205 105120019
KMT5A 166 46 79 50 0 0 0.643 0.178 0.306 0.194 0.000 0.000 chr12 123379132 123414353
KMT5B 163 49 79 45 0 0 0.632 0.190 0.306 0.174 0.000 0.000 chr11 68149863 68218296
KMT5C 202 69 48 28 1 1 0.783 0.267 0.186 0.109 0.004 0.004 chr19 55334876 55353121
KNCN 206 66 51 38 0 0 0.798 0.256 0.198 0.147 0.000 0.000 chr1 46540641 46556647
KNDC1 165 42 72 51 0 0 0.640 0.163 0.279 0.198 0.000 0.000 chr10 133155219 133231412
KNG1 214 76 37 23 0 0 0.829 0.295 0.143 0.089 0.000 0.000 chr3 186712359 186749410
KNL1 184 62 64 36 1 1 0.713 0.240 0.248 0.140 0.004 0.004 chr15 40589249 40669342
KNOP1 185 51 71 53 0 0 0.717 0.198 0.275 0.205 0.000 0.000 chr16 19696937 19723227
KNSTRN 186 60 62 38 0 0 0.721 0.233 0.240 0.147 0.000 0.000 chr15 40377721 40399288
KNTC1 159 46 90 53 0 0 0.616 0.178 0.349 0.205 0.000 0.000 chr12 122522249 122631396
KPLCE 191 55 65 48 0 0 0.740 0.213 0.252 0.186 0.000 0.000 chr1 152714522 152725470
KPNA1 199 72 48 29 0 0 0.771 0.279 0.186 0.112 0.000 0.000 chr3 122416902 122519939
KPNA2 169 56 85 48 0 0 0.655 0.217 0.329 0.186 0.000 0.000 chr17 68030735 68051854
KPNA3 187 57 57 38 0 0 0.725 0.221 0.221 0.147 0.000 0.000 chr13 49694320 49797682
KPNA4 153 42 90 52 0 0 0.593 0.163 0.349 0.202 0.000 0.000 chr3 160490007 160570571
KPNA5 171 59 75 40 0 0 0.663 0.229 0.291 0.155 0.000 0.000 chr6 116676211 116746867
KPNA6 121 32 106 54 0 0 0.469 0.124 0.411 0.209 0.000 0.000 chr1 32103056 32181563
KPNA7 166 47 69 45 0 0 0.643 0.182 0.267 0.174 0.000 0.000 chr7 99168572 99213115
KPNB1 191 68 54 29 0 0 0.740 0.264 0.209 0.112 0.000 0.000 chr17 47644919 47690505
KPRP 213 75 43 28 1 1 0.826 0.291 0.167 0.109 0.004 0.004 chr1 152753025 152767056