Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
KPTN 189 52 64 48 0 0 0.733 0.202 0.248 0.186 0.000 0.000 chr19 47470150 47489219
KRAS 172 44 74 50 0 0 0.667 0.171 0.287 0.194 0.000 0.000 chr12 25200246 25255929
KRBA1 206 72 40 22 0 0 0.798 0.279 0.155 0.085 0.000 0.000 chr7 149709951 149739575
KRBA2 193 66 54 29 0 0 0.748 0.256 0.209 0.112 0.000 0.000 chr17 8353822 8381704
KRBOX1 212 78 43 24 0 0 0.822 0.302 0.167 0.093 0.000 0.000 chr3 42931386 42947792
KRBOX4 93 31 159 70 0 0 0.360 0.120 0.616 0.271 0.000 0.000 chrX 46442297 46479639
KRBOX5 186 71 57 27 0 0 0.721 0.275 0.221 0.105 0.000 0.000 chr16 31708244 31766565
KRCC1 169 50 81 48 0 0 0.655 0.194 0.314 0.186 0.000 0.000 chr2 88022205 88060783
KREMEN1 183 63 58 32 0 0 0.709 0.244 0.225 0.124 0.000 0.000 chr22 29068035 29151820
KREMEN2 216 78 38 23 1 1 0.837 0.302 0.147 0.089 0.004 0.004 chr16 2959275 2973380
KRI1 202 68 49 30 0 0 0.783 0.264 0.190 0.116 0.000 0.000 chr19 10548085 10571010
KRIT1 179 64 68 34 0 0 0.694 0.248 0.264 0.132 0.000 0.000 chr7 92194413 92250914
KRR1 183 60 69 42 0 0 0.709 0.233 0.267 0.163 0.000 0.000 chr12 75485863 75516609
KRT10 212 82 43 21 1 1 0.822 0.318 0.167 0.081 0.004 0.004 chr17 40813117 40827614
KRT12 212 78 45 26 0 0 0.822 0.302 0.174 0.101 0.000 0.000 chr17 40856303 40872223
KRT13 234 84 24 21 0 0 0.907 0.326 0.093 0.081 0.000 0.000 chr17 41495981 41510612
KRT14 164 37 88 63 0 0 0.636 0.143 0.341 0.244 0.000 0.000 chr17 41577279 41591895
KRT15 198 57 56 44 1 1 0.767 0.221 0.217 0.171 0.004 0.004 chr17 41508745 41523890
KRT16 198 61 59 44 0 0 0.767 0.236 0.229 0.171 0.000 0.000 chr17 41604778 41617767
KRT17 201 61 48 36 1 0 0.779 0.236 0.186 0.140 0.004 0.000 chr17 41614442 41629575
KRT18 203 69 51 32 0 0 0.787 0.267 0.198 0.124 0.000 0.000 chr12 52944118 52957906
KRT19 183 51 71 50 0 0 0.709 0.198 0.275 0.194 0.000 0.000 chr17 41518617 41533308
KRT1 198 64 58 40 2 1 0.767 0.248 0.225 0.155 0.008 0.004 chr12 52669736 52685407
KRT20 225 85 32 19 0 0 0.872 0.329 0.124 0.074 0.000 0.000 chr17 40870889 40890242
KRT222 208 80 41 21 2 0 0.806 0.310 0.159 0.081 0.008 0.000 chr17 40649665 40670177
KRT23 218 75 35 25 1 1 0.845 0.291 0.136 0.097 0.004 0.004 chr17 40917700 40942646
KRT24 211 86 46 19 0 0 0.818 0.333 0.178 0.074 0.000 0.000 chr17 40692991 40708752
KRT25 212 75 45 29 1 1 0.822 0.291 0.174 0.112 0.004 0.004 chr17 40743021 40760331
KRT26 206 69 50 34 0 0 0.798 0.267 0.194 0.132 0.000 0.000 chr17 40761238 40777201
KRT27 231 86 27 19 0 0 0.895 0.333 0.105 0.074 0.000 0.000 chr17 40771808 40787550
KRT28 232 90 23 13 2 1 0.899 0.349 0.089 0.050 0.008 0.004 chr17 40787196 40804959
KRT2 232 83 25 21 0 0 0.899 0.322 0.097 0.081 0.000 0.000 chr12 52639558 52657211
KRT31 226 84 29 20 2 0 0.876 0.326 0.112 0.078 0.008 0.000 chr17 41388721 41402608
KRT32 229 85 29 20 0 0 0.888 0.329 0.112 0.078 0.000 0.000 chr17 41454513 41472386
KRT33A 224 82 34 23 0 0 0.868 0.318 0.132 0.089 0.000 0.000 chr17 41341092 41355828
KRT33B 212 78 44 26 0 0 0.822 0.302 0.171 0.101 0.000 0.000 chr17 41358498 41374813
KRT34 225 86 33 19 0 0 0.872 0.333 0.128 0.074 0.000 0.000 chr17 41372669 41387306
KRT35 223 83 33 20 0 0 0.864 0.322 0.128 0.078 0.000 0.000 chr17 41471710 41486151
KRT36 232 89 23 13 0 0 0.899 0.345 0.089 0.050 0.000 0.000 chr17 41481136 41494910
KRT37 204 77 50 26 2 1 0.791 0.298 0.194 0.101 0.008 0.004 chr17 41415547 41429585
KRT38 215 80 42 25 0 0 0.833 0.310 0.163 0.097 0.000 0.000 chr17 41431154 41445983
KRT39 211 73 44 30 0 0 0.818 0.283 0.171 0.116 0.000 0.000 chr17 40953417 40971948
KRT3 226 79 26 20 1 1 0.876 0.306 0.101 0.078 0.004 0.004 chr12 52784685 52801117
KRT40 225 81 29 21 0 0 0.872 0.314 0.112 0.081 0.000 0.000 chr17 40972715 40989326
KRT4 234 87 24 18 0 0 0.907 0.337 0.093 0.070 0.000 0.000 chr12 52801549 52819116
KRT5 227 84 26 18 2 1 0.880 0.326 0.101 0.070 0.008 0.004 chr12 52509575 52525394
KRT6A 205 68 53 37 0 0 0.795 0.264 0.205 0.143 0.000 0.000 chr12 52482176 52498257
KRT6B 216 77 41 28 0 0 0.837 0.298 0.159 0.109 0.000 0.000 chr12 52441651 52457146
KRT6C 218 75 39 29 0 0 0.845 0.291 0.151 0.112 0.000 0.000 chr12 52463516 52478805
KRT71 224 77 28 22 0 0 0.868 0.298 0.109 0.085 0.000 0.000 chr12 52538909 52558145