Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
MAP1LC3B2 222 84 29 15 0 0 0.860 0.326 0.112 0.058 0.000 0.000 chr12 116554381 116581606
MAP1LC3B 209 69 46 33 0 0 0.810 0.267 0.178 0.128 0.000 0.000 chr16 87387336 87409774
MAP1LC3C 225 88 29 13 1 1 0.872 0.341 0.112 0.050 0.004 0.004 chr1 241990490 242004098
MAP1S 144 24 100 68 0 0 0.558 0.093 0.388 0.264 0.000 0.000 chr19 17714480 17739513
MAP2K1 185 61 56 31 0 0 0.717 0.236 0.217 0.120 0.000 0.000 chr15 66381912 66496544
MAP2K2 164 41 71 49 0 0 0.636 0.159 0.275 0.190 0.000 0.000 chr19 4085321 4129122
MAP2K3 182 54 65 43 0 0 0.705 0.209 0.252 0.167 0.000 0.000 chr17 21279711 21320232
MAP2K4 160 51 72 39 0 0 0.620 0.198 0.279 0.151 0.000 0.000 chr17 12015877 12148828
MAP2K5 138 45 90 47 0 0 0.535 0.174 0.349 0.182 0.000 0.000 chr15 67537703 67812114
MAP2K6 129 33 71 40 0 0 0.500 0.128 0.275 0.155 0.000 0.000 chr17 69409697 69558865
MAP2K7 216 70 38 31 0 0 0.837 0.271 0.147 0.120 0.000 0.000 chr19 7898877 7919478
MAP2 73 20 112 55 0 0 0.283 0.078 0.434 0.213 0.000 0.000 chr2 209419047 209739112
MAP3K10 198 65 56 38 0 0 0.767 0.252 0.217 0.147 0.000 0.000 chr19 40186426 40220575
MAP3K11 195 63 54 35 0 0 0.756 0.244 0.209 0.136 0.000 0.000 chr11 65592757 65619221
MAP3K12 163 46 86 51 0 0 0.632 0.178 0.333 0.198 0.000 0.000 chr12 53474669 53504458
MAP3K13 138 44 83 45 0 0 0.535 0.171 0.322 0.174 0.000 0.000 chr3 185358136 185494094
MAP3K14 167 53 76 43 0 0 0.647 0.205 0.295 0.167 0.000 0.000 chr17 45258119 45322020
MAP3K15 27 1 183 73 0 0 0.105 0.004 0.709 0.283 0.000 0.000 chrX 19355059 19520508
MAP3K19 166 56 65 33 0 0 0.643 0.217 0.252 0.128 0.000 0.000 chr2 134959491 135052447
MAP3K1 191 66 59 34 0 0 0.740 0.256 0.229 0.132 0.000 0.000 chr5 56810549 56901152
MAP3K20 166 48 58 40 0 0 0.643 0.186 0.225 0.155 0.000 0.000 chr2 173070846 173273015
MAP3K21 185 65 63 37 0 0 0.717 0.252 0.244 0.143 0.000 0.000 chr1 233322724 233390148
MAP3K2 159 51 78 45 0 0 0.616 0.198 0.302 0.174 0.000 0.000 chr2 127293668 127392975
MAP3K3 89 13 136 75 0 0 0.345 0.050 0.527 0.291 0.000 0.000 chr17 63617417 63701305
MAP3K4 170 54 61 35 0 0 0.659 0.209 0.236 0.136 0.000 0.000 chr6 160986769 161122380
MAP3K5 80 17 115 61 0 0 0.310 0.066 0.446 0.236 0.000 0.000 chr6 136552046 136797477
MAP3K6 205 64 48 36 0 0 0.795 0.248 0.186 0.140 0.000 0.000 chr1 27350184 27371961
MAP3K7CL 202 72 50 29 0 0 0.783 0.279 0.194 0.112 0.000 0.000 chr21 29125644 29180887
MAP3K7 171 53 76 45 0 0 0.663 0.205 0.295 0.174 0.000 0.000 chr6 90508579 90592072
MAP3K8 192 62 55 34 1 1 0.744 0.240 0.213 0.132 0.004 0.004 chr10 30429184 30466833
MAP3K9 186 68 55 28 0 0 0.721 0.264 0.213 0.109 0.000 0.000 chr14 70717526 70814513
MAP4K1 173 53 67 41 0 0 0.671 0.205 0.260 0.159 0.000 0.000 chr19 38582641 38622953
MAP4K2 183 60 66 38 0 0 0.709 0.233 0.256 0.147 0.000 0.000 chr11 64779918 64808214
MAP4K3 115 32 108 61 0 0 0.446 0.124 0.419 0.236 0.000 0.000 chr2 39244266 39442285
MAP4K4 154 40 78 51 0 0 0.597 0.155 0.302 0.198 0.000 0.000 chr2 101692707 101899690
MAP4K5 119 30 98 56 0 0 0.461 0.116 0.380 0.217 0.000 0.000 chr14 50413521 50537569
MAP4 115 33 121 62 0 0 0.446 0.128 0.469 0.240 0.000 0.000 chr3 47845695 48021416
MAP6D1 230 86 27 18 0 0 0.891 0.333 0.105 0.070 0.000 0.000 chr3 183810922 183830577
MAP6 194 77 51 24 0 0 0.752 0.298 0.198 0.093 0.000 0.000 chr11 75581918 75674038
MAP7D1 188 67 63 35 0 0 0.729 0.260 0.244 0.136 0.000 0.000 chr1 36151160 36185849
MAP7D2 42 3 194 91 0 0 0.163 0.012 0.752 0.353 0.000 0.000 chrX 20001713 20121907
MAP7D3 73 23 176 76 0 0 0.283 0.089 0.682 0.295 0.000 0.000 chrX 136211814 136256400
MAP7 123 52 110 48 0 0 0.477 0.202 0.426 0.186 0.000 0.000 chr6 136337734 136555422
MAP9 207 83 45 19 0 0 0.802 0.322 0.174 0.074 0.000 0.000 chr4 155337658 155381965
MAPK10 84 19 98 53 0 0 0.326 0.074 0.380 0.205 0.000 0.000 chr4 86005405 86365053
MAPK11 213 70 36 26 0 0 0.826 0.271 0.140 0.101 0.000 0.000 chr22 50258713 50275380
MAPK12 221 74 32 26 0 0 0.857 0.287 0.124 0.101 0.000 0.000 chr22 50247901 50266683
MAPK13 211 70 46 34 0 0 0.818 0.271 0.178 0.132 0.000 0.000 chr6 36125513 36149521
MAPK14 170 62 70 36 0 0 0.659 0.240 0.271 0.140 0.000 0.000 chr6 36022808 36116236
MAPK15 198 55 54 44 0 0 0.767 0.213 0.209 0.171 0.000 0.000 chr8 143711349 143727458