Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
MC2R 207 74 34 22 0 0 0.802 0.287 0.132 0.085 0.000 0.000 chr18 13877044 13920536
MC3R 229 82 25 19 0 0 0.888 0.318 0.097 0.074 0.000 0.000 chr20 56243732 56254815
MC4R 213 77 44 28 1 0 0.826 0.298 0.171 0.109 0.004 0.000 chr18 60366062 60377775
MC5R 215 77 42 27 1 1 0.833 0.298 0.163 0.105 0.004 0.004 chr18 13819149 13832323
MCAM 240 91 18 14 0 0 0.930 0.353 0.070 0.054 0.000 0.000 chr11 119303529 119322130
MCAT 208 67 44 32 0 0 0.806 0.260 0.171 0.124 0.000 0.000 chr22 43127209 43148398
MCCC1 171 57 70 37 0 0 0.663 0.221 0.271 0.143 0.000 0.000 chr3 183010218 183104496
MCCC2 174 59 70 37 0 0 0.674 0.229 0.271 0.143 0.000 0.000 chr5 71582340 71663706
MCCD1 222 80 33 22 2 2 0.860 0.310 0.128 0.085 0.008 0.008 chr6 31523962 31535232
MCC 79 21 97 46 0 0 0.306 0.081 0.376 0.178 0.000 0.000 chr5 113017106 113493453
MCEE 208 73 45 29 0 0 0.806 0.283 0.174 0.112 0.000 0.000 chr2 71104687 71135229
MCEMP1 223 74 30 27 0 0 0.864 0.287 0.116 0.105 0.000 0.000 chr19 7672090 7684829
MCF2L2 87 16 83 44 0 0 0.337 0.062 0.322 0.171 0.000 0.000 chr3 183173041 183433619
MCF2L 57 6 115 42 0 0 0.221 0.023 0.446 0.163 0.000 0.000 chr13 112964214 113104742
MCF2 59 13 172 79 0 0 0.229 0.050 0.667 0.306 0.000 0.000 chrX 139576770 139713167
MCFD2 205 69 51 35 0 0 0.795 0.267 0.198 0.136 0.000 0.000 chr2 46896874 46920806
MCHR1 202 64 51 36 0 0 0.783 0.248 0.198 0.140 0.000 0.000 chr22 40674484 40687812
MCHR2 157 41 83 54 0 0 0.609 0.159 0.322 0.209 0.000 0.000 chr6 99913519 99999223
MCIDAS 192 67 63 37 0 0 0.744 0.260 0.244 0.143 0.000 0.000 chr5 55214564 55232315
MCL1 205 71 49 31 1 1 0.795 0.275 0.190 0.120 0.004 0.004 chr1 150569558 150584610
MCM10 215 71 38 29 1 1 0.833 0.275 0.147 0.112 0.004 0.004 chr10 13156558 13216110
MCM2 212 67 38 32 0 0 0.822 0.260 0.147 0.124 0.000 0.000 chr3 127593411 127627436
MCM3AP 179 54 69 45 0 0 0.694 0.209 0.267 0.174 0.000 0.000 chr21 46230133 46290611
MCM3 214 87 41 16 0 0 0.829 0.337 0.159 0.062 0.000 0.000 chr6 52259015 52289742
MCM4 156 41 97 60 0 0 0.605 0.159 0.376 0.233 0.000 0.000 chr8 47955941 47983160
MCM5 201 68 48 29 0 0 0.779 0.264 0.186 0.112 0.000 0.000 chr22 35395140 35430431
MCM6 196 76 52 23 0 0 0.760 0.295 0.202 0.089 0.000 0.000 chr2 135834626 135881443
MCM7 210 70 46 33 0 0 0.814 0.271 0.178 0.128 0.000 0.000 chr7 100087728 100106397
MCM8 182 58 61 37 0 0 0.705 0.225 0.236 0.143 0.000 0.000 chr20 5945652 6003977
MCM9 173 50 71 46 0 0 0.671 0.194 0.275 0.178 0.000 0.000 chr6 118808455 118940159
MCMBP 199 65 52 34 0 0 0.771 0.252 0.202 0.132 0.000 0.000 chr10 119824440 119877843
MCMDC2 100 18 130 69 0 0 0.388 0.070 0.504 0.267 0.000 0.000 chr8 66865771 66927048
MCOLN1 206 64 48 37 0 0 0.798 0.248 0.186 0.143 0.000 0.000 chr19 7517624 7539009
MCOLN2 174 56 59 37 0 0 0.674 0.217 0.229 0.143 0.000 0.000 chr1 84920583 85002113
MCOLN3 184 67 64 32 0 0 0.713 0.260 0.248 0.124 0.000 0.000 chr1 85013082 85053500
MCPH1 130 40 57 36 0 0 0.504 0.155 0.221 0.140 0.000 0.000 chr8 6401627 6653508
MCRIP1 182 48 66 49 0 0 0.705 0.186 0.256 0.190 0.000 0.000 chr17 81817361 81838291
MCRIP2 209 67 42 33 1 0 0.810 0.260 0.163 0.128 0.004 0.000 chr16 636828 653474
MCRS1 153 39 100 62 0 0 0.593 0.151 0.388 0.240 0.000 0.000 chr12 49553299 49573142
MCTP1 49 7 105 52 0 0 0.190 0.027 0.407 0.202 0.000 0.000 chr5 94698690 95290094
MCTP2 137 35 57 39 0 0 0.531 0.136 0.221 0.151 0.000 0.000 chr15 94226561 94488952
MCTS1 94 34 160 68 0 0 0.364 0.132 0.620 0.264 0.000 0.000 chrX 120599101 120626159
MCTS2 174 48 81 54 0 0 0.674 0.186 0.314 0.209 0.000 0.000 chr20 31542379 31553081
MCUB 167 52 60 30 0 0 0.647 0.202 0.233 0.116 0.000 0.000 chr4 109555246 109693719
MCUR1 211 78 41 22 0 0 0.818 0.302 0.159 0.085 0.000 0.000 chr6 13781557 13819557
MCU 104 16 118 73 0 0 0.403 0.062 0.457 0.283 0.000 0.000 chr10 72687143 72892694
MDC1 206 70 43 29 0 0 0.798 0.271 0.167 0.112 0.000 0.000 chr6 30694807 30722281
MDFIC2 184 62 49 30 0 0 0.713 0.240 0.190 0.116 0.000 0.000 chr3 70189479 70317638
MDFIC 166 50 55 36 0 0 0.643 0.194 0.213 0.140 0.000 0.000 chr7 114917094 115024917
MDFI 230 81 24 20 0 0 0.891 0.314 0.093 0.078 0.000 0.000 chr6 41633468 41659244